Query 031910
Match_columns 150
No_of_seqs 136 out of 1171
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 11:03:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031910.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031910hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ucz_A UBC7, ubiquitin conjuga 100.0 1.3E-43 4.3E-48 262.5 17.2 134 1-135 1-134 (165)
2 3h8k_A Ubiquitin-conjugating e 100.0 4.9E-43 1.7E-47 259.1 16.9 132 4-135 2-133 (164)
3 3rz3_A Ubiquitin-conjugating e 100.0 2.2E-43 7.7E-48 265.2 15.1 135 1-135 3-137 (183)
4 2awf_A Ubiquitin-conjugating e 100.0 2E-42 6.7E-47 257.8 14.8 132 3-134 15-146 (172)
5 2fo3_A Ubiquitin-conjugating e 100.0 2E-41 6.7E-46 240.5 14.0 117 4-134 5-122 (125)
6 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.8E-41 9.4E-46 250.9 14.3 120 1-135 1-120 (169)
7 4gpr_A Ubiquitin-conjugating e 100.0 6.1E-41 2.1E-45 244.9 15.4 119 3-135 2-120 (151)
8 2h2y_A Ubiquitin-conjugating e 100.0 1.1E-40 3.7E-45 239.8 14.9 116 4-133 19-135 (136)
9 2aak_A UBC1, ubiquitin conjuga 100.0 8.4E-41 2.9E-45 244.4 14.4 120 1-135 1-120 (152)
10 2e2c_A Ubiquitin conjugating e 100.0 7.5E-41 2.6E-45 245.6 13.9 117 4-134 8-124 (156)
11 1zdn_A Ubiquitin-conjugating e 100.0 9.6E-41 3.3E-45 245.5 14.4 120 2-135 10-129 (158)
12 1z2u_A Ubiquitin-conjugating e 100.0 9.2E-41 3.2E-45 243.7 14.2 119 3-135 2-120 (150)
13 2ayv_A Ubiquitin-conjugating e 100.0 1.3E-40 4.3E-45 246.7 14.7 118 4-135 20-137 (166)
14 2c4o_A Ubiquitin-conjugating e 100.0 1.9E-40 6.5E-45 245.5 15.6 119 3-135 17-135 (165)
15 2c2v_B Ubiquitin-conjugating e 100.0 3.9E-41 1.3E-45 246.7 11.4 118 3-134 3-120 (154)
16 2r0j_A Ubiquitin carrier prote 100.0 1.5E-40 5.1E-45 242.4 13.0 115 7-135 3-117 (149)
17 1yh2_A HSPC150 protein similar 100.0 4.6E-40 1.6E-44 244.3 15.4 122 3-134 2-123 (169)
18 1i7k_A Ubiquitin-conjugating e 100.0 1.8E-40 6.1E-45 248.5 13.0 119 3-135 28-146 (179)
19 3rcz_B SUMO-conjugating enzyme 100.0 3.7E-40 1.2E-44 243.6 14.5 122 3-135 8-133 (163)
20 2bep_A Ubiquitin-conjugating e 100.0 4.5E-40 1.5E-44 242.2 14.9 120 2-135 5-128 (159)
21 2gjd_A Ubiquitin-conjugating e 100.0 2.7E-40 9.2E-45 242.9 13.1 123 1-135 1-127 (157)
22 1fxt_A Ubiquitin-conjugating e 100.0 2E-40 6.8E-45 241.7 11.8 116 6-134 2-118 (149)
23 1jat_A Ubiquitin-conjugating e 100.0 2.1E-40 7.1E-45 243.0 11.7 116 4-133 4-119 (155)
24 2grr_A Ubiquitin-conjugating e 100.0 6.5E-40 2.2E-44 241.8 14.0 123 2-135 4-130 (161)
25 2a7l_A Hypothetical ubiquitin- 100.0 5.3E-40 1.8E-44 236.2 11.9 109 7-129 24-136 (136)
26 1yrv_A Ubiquitin-conjugating l 100.0 4.9E-40 1.7E-44 244.1 12.0 121 3-135 21-142 (169)
27 3bzh_A Ubiquitin-conjugating e 100.0 2.5E-39 8.4E-44 245.0 16.0 118 4-135 47-164 (194)
28 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.4E-39 4.9E-44 246.1 13.5 118 4-135 31-162 (193)
29 1jat_B Ubiquitin-conjugating e 100.0 6.3E-40 2.1E-44 236.3 10.9 122 1-136 2-129 (138)
30 2pwq_A Ubiquitin conjugating e 100.0 9.1E-40 3.1E-44 251.0 12.2 119 3-135 21-140 (216)
31 3k9o_A Ubiquitin-conjugating e 100.0 2.7E-39 9.3E-44 246.1 13.3 120 1-135 2-125 (201)
32 2a4d_A Ubiquitin-conjugating e 100.0 1.4E-38 4.8E-43 234.3 15.0 119 4-133 24-147 (160)
33 1tte_A Ubiquitin-conjugating e 100.0 7.3E-40 2.5E-44 251.3 8.3 118 5-135 2-120 (215)
34 3fn1_B NEDD8-conjugating enzym 100.0 1E-38 3.5E-43 236.6 14.0 120 4-131 13-132 (167)
35 1wzv_A Ubiquitin-conjugating e 100.0 7.5E-39 2.6E-43 234.7 13.0 117 5-134 4-120 (155)
36 2q0v_A Ubiquitin-conjugating e 100.0 8.5E-39 2.9E-43 234.7 12.9 119 3-135 19-143 (156)
37 2y9m_A Ubiquitin-conjugating e 100.0 2.2E-38 7.5E-43 235.9 14.6 122 2-135 3-137 (172)
38 1y8x_A Ubiquitin-conjugating e 100.0 1.8E-38 6.2E-43 233.9 13.4 116 4-135 5-120 (160)
39 1c4z_D UBCH7, ubiquitin conjug 100.0 8.9E-39 3.1E-43 234.1 10.6 116 6-134 3-118 (154)
40 3e46_A Ubiquitin-conjugating e 100.0 3.8E-38 1.3E-42 246.8 14.8 119 3-135 55-177 (253)
41 2nvu_C NEDD8-conjugating enzym 100.0 3.1E-38 1.1E-42 236.6 12.9 117 3-135 24-140 (180)
42 2hlw_A Ubiquitin-conjugating e 100.0 3.9E-38 1.3E-42 234.0 10.7 119 4-133 34-157 (170)
43 2f4w_A Ubiquitin-conjugating e 100.0 3.3E-37 1.1E-41 232.2 13.5 123 3-138 12-134 (187)
44 3ceg_A Baculoviral IAP repeat- 100.0 7.4E-37 2.5E-41 246.0 16.0 135 2-143 73-217 (323)
45 1zuo_A Hypothetical protein LO 100.0 1.2E-37 4.2E-42 234.4 9.8 121 2-135 24-160 (186)
46 2onu_A Ubiquitin-conjugating e 100.0 4.8E-38 1.6E-42 229.9 6.2 114 5-135 2-117 (152)
47 2z5d_A Ubiquitin-conjugating e 100.0 1.4E-37 4.8E-42 232.7 8.0 112 5-134 25-138 (179)
48 3o2u_A NEDD8-conjugating enzym 100.0 1.2E-36 4.2E-41 229.6 13.1 117 3-135 27-149 (190)
49 4ddg_A Ubiquitin-conjugating e 100.0 1.5E-36 5.1E-41 251.5 14.7 118 4-135 2-119 (399)
50 4ds2_A Ubiquitin-conjugating e 100.0 6E-37 2.1E-41 227.1 8.9 115 1-130 5-134 (167)
51 1yf9_A Ubiquitin carrier prote 100.0 5.4E-37 1.8E-41 228.2 8.3 113 5-135 12-126 (171)
52 2z6o_A UFM1-conjugating enzyme 99.9 9.4E-29 3.2E-33 180.9 -0.4 98 6-122 33-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.8E-19 9.4E-24 131.3 9.3 112 8-134 31-160 (162)
54 3kpa_A Probable ubiquitin fold 99.8 1.5E-20 5.2E-25 134.9 -1.3 82 6-94 35-127 (168)
55 3obq_A Tumor susceptibility ge 99.6 6.5E-15 2.2E-19 106.3 7.0 107 10-135 25-143 (146)
56 2ebm_A RWD domain-containing p 97.0 0.0066 2.3E-07 41.7 9.0 68 6-76 11-78 (128)
57 3zqs_A E3 ubiquitin-protein li 96.6 0.01 3.5E-07 44.0 7.8 90 8-136 4-94 (186)
58 2day_A Ring finger protein 25; 96.4 0.013 4.5E-07 40.1 7.1 70 8-77 11-83 (128)
59 2yz0_A Serine/threonine-protei 96.2 0.062 2.1E-06 37.2 9.9 68 7-77 12-86 (138)
60 2ebk_A RWD domain-containing p 95.2 0.034 1.2E-06 38.1 5.3 68 8-76 10-79 (128)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 94.8 0.34 1.1E-05 33.2 9.5 68 7-76 12-86 (137)
62 2daw_A RWD domain containing p 93.8 0.33 1.1E-05 34.3 7.8 69 5-77 14-99 (154)
63 2dax_A Protein C21ORF6; RWD do 90.5 0.18 6E-06 35.6 2.9 24 54-77 74-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 47.4 17 0.0006 17.3 2.3 21 5-25 5-25 (26)
65 3g9r_A Fusion complex of HIV-1 29.9 42 0.0014 18.1 2.3 14 5-18 28-41 (42)
66 2bum_A Protocatechuate 3,4-dio 27.2 61 0.0021 23.8 3.7 26 51-76 109-139 (209)
67 2rf4_B DNA-directed RNA polyme 23.4 41 0.0014 21.4 1.8 12 6-17 63-74 (87)
No 1
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-43 Score=262.50 Aligned_cols=134 Identities=47% Similarity=0.856 Sum_probs=126.1
Q ss_pred CChHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcc
Q 031910 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (150)
Q Consensus 1 Mas~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (150)
|+ ++|.+||++|+++|++++++||++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 M~-~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MS-KTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -C-HHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 66 58999999999999999999999999866899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 81 pnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|||+.+|+||+++|++++.++++++.+.++|+|+++|++||++|+++|.+|++-.
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~ 134 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIES 134 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGG
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999998888888888889999999999999999999999877643
No 2
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=4.9e-43 Score=259.08 Aligned_cols=132 Identities=48% Similarity=0.886 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCccccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 83 (150)
++|.+||++|+++|++++++||++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 57899999999999999999999999866699999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 84 ~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
+.+|+||+++|+++++++.+++.+.++|+|+++|++||++|+++|.+|++-.
T Consensus 82 ~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~ 133 (164)
T 3h8k_A 82 YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDES 133 (164)
T ss_dssp CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSS
T ss_pred CCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCC
Confidence 9999999999998888899999999999999999999999999999987754
No 3
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.2e-43 Score=265.17 Aligned_cols=135 Identities=46% Similarity=0.916 Sum_probs=114.9
Q ss_pred CChHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcc
Q 031910 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (150)
Q Consensus 1 Mas~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (150)
||+++|.+||++|+++|++++++|+++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 88899999999999999999999999996678999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 81 pnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|||+.+|+||+++|+++++++++++...++|+|+++|++||++|+++|.+|++..
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~ 137 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFS 137 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSS
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999998788888777788999999999999999999999987654
No 4
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2e-42 Score=257.76 Aligned_cols=132 Identities=52% Similarity=1.025 Sum_probs=115.1
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
++++.+||+||+++|++++++||++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 45789999999999999999999999986689999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWF 134 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~ 134 (150)
|+.+|+||+++|.++++++++|+...++|+|+++|++||++|+++|.+|++-
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~ 146 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGD 146 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC---
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCC
Confidence 9999999999998777777888888899999999999999999999887653
No 5
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=2e-41 Score=240.49 Aligned_cols=117 Identities=26% Similarity=0.514 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccC-cccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM-WHPN 82 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~Hpn 82 (150)
++|.+||++|+++++++++.|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ +|||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVH-PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEEC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeC-cchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 458899999999999999999999885 88999999999999999999999999999999999999999999996 9999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWF 134 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~ 134 (150)
|+.+|+||+++|. ++|+|+++|++||++|+++|.++++-
T Consensus 84 v~~~G~iCl~iL~-------------~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 84 VYSNGDICLSLLG-------------DDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp BCTTSBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCCEEEchhcC-------------CCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 9999999999996 89999999999999999999988753
No 6
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-41 Score=250.91 Aligned_cols=120 Identities=38% Similarity=0.711 Sum_probs=113.6
Q ss_pred CChHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcc
Q 031910 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (150)
Q Consensus 1 Mas~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (150)
|+ ++|.+||++|+++|++++++|+.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 Ms-~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 1 MS-TPARRRLMRDFKRMKEDAPPGVSASPL-PDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp -C-CHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEec-CCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 55 578999999999999999999999987 8899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 81 pnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|||+.+|+||+++|. ++|+|+++|.+||++|+++|.+|+|..
T Consensus 79 PNI~~~G~ICl~iL~-------------~~WsP~~~i~~vL~si~~ll~~Pn~~~ 120 (169)
T 1ayz_A 79 PNVYANGEICLDILQ-------------NRWTPTYDVASILTSIQSLFNDPNPAS 120 (169)
T ss_dssp TTBCTTSBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHTCCCCSS
T ss_pred CCCCCCCeEeehhhc-------------cCCCCcCcHHHHHHHHHHHHhCCCCCc
Confidence 999999999999997 899999999999999999999877654
No 7
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=6.1e-41 Score=244.92 Aligned_cols=119 Identities=33% Similarity=0.663 Sum_probs=114.0
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
++.|.+||++|+++|+++++.|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPV-GDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 4678999999999999999999999996 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|+.+|+||+++|. ++|+|+++|++||.+|+++|.+|+|..
T Consensus 81 v~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~ 120 (151)
T 4gpr_A 81 INKNGVICLDILK-------------DQWSPALTLSRVLLSISSLLTDPNPSD 120 (151)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHCCCTTS
T ss_pred ECCCCEEEccccc-------------CCCCCCCcHHHHHHHHHHHhcCCCCCC
Confidence 9999999999997 899999999999999999999987754
No 8
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-40 Score=239.83 Aligned_cols=116 Identities=28% Similarity=0.549 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccC-cccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM-WHPN 82 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~Hpn 82 (150)
+.|.+||++|+++|+++++.|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVH-PSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEEC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEec-cccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 468899999999999999999999885 88999999999999999999999999999999999999999999996 9999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW 133 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~ 133 (150)
|+.+|+||+++|. ++|+|+++|++||++|+++|.+|+.
T Consensus 98 v~~~G~ICl~iL~-------------~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 98 VYSNGDICLSVLG-------------DDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp BCTTCCBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCCCEEECcccc-------------CCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 9999999999996 8999999999999999999998763
No 9
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=8.4e-41 Score=244.37 Aligned_cols=120 Identities=35% Similarity=0.735 Sum_probs=113.9
Q ss_pred CChHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcc
Q 031910 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (150)
Q Consensus 1 Mas~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (150)
|+ +.|.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 Ms-~~a~~RL~~E~~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (152)
T 2aak_A 1 MS-TPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFH 78 (152)
T ss_dssp CC-CHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEeC-CCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCccc
Confidence 55 578899999999999999999999986 8899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 81 pnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|||+.+|+||+++|. ++|+|+++|.+||.+|+++|.+|++..
T Consensus 79 Pnv~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~ 120 (152)
T 2aak_A 79 PNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNS 120 (152)
T ss_dssp TTBCTTSBBCCGGGT-------------TSCCTTCCHHHHHHHHHHHHTSCCTTS
T ss_pred CCCCCCCEEechhhc-------------CCCCCCCcHHHHHHHHHHHHhCCCCCc
Confidence 999999999999996 899999999999999999999877653
No 10
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=7.5e-41 Score=245.62 Aligned_cols=117 Identities=33% Similarity=0.606 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCccccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 83 (150)
+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 86 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPD-GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNV 86 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEC-CCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCC
Confidence 458999999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccc
Q 031910 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWF 134 (150)
Q Consensus 84 ~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~ 134 (150)
+.+|+||+++|. ++|+|+++|.+||++|+++|.+|++-
T Consensus 87 ~~~G~iCl~iL~-------------~~W~p~~~i~~vL~si~~ll~~pn~~ 124 (156)
T 2e2c_A 87 DQSGNICLDILK-------------ENWTASYDVRTILLSLQSLLGEPNNA 124 (156)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHTTSCCCS
T ss_pred ccCceEECcccc-------------ccCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 999999999996 89999999999999999999987764
No 11
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.6e-41 Score=245.54 Aligned_cols=120 Identities=26% Similarity=0.480 Sum_probs=114.1
Q ss_pred ChHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCccc
Q 031910 2 AKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHP 81 (150)
Q Consensus 2 as~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 81 (150)
++.++.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 10 ~s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 88 (158)
T 1zdn_A 10 LPPHIIRLVYKEVTTLTADPPDGIKVFPN-EEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHP 88 (158)
T ss_dssp SCHHHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCEEEEEC-CCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccC
Confidence 34678999999999999999999999985 88999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 82 NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 82 nv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
||+.+|+||+++|. ++|+|+++|.+||.+|+++|.+|+|-.
T Consensus 89 nv~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~pn~~~ 129 (158)
T 1zdn_A 89 NVGANGEICVNVLK-------------RDWTAELGIRHVLLTIKCLLIHPNPES 129 (158)
T ss_dssp TBCTTSBBCHHHHT-------------TTCCTTCCHHHHHHHHHHHHHSCCGGG
T ss_pred CCCCCCEEehhhcC-------------CCCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 99999999999996 899999999999999999999988753
No 12
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=9.2e-41 Score=243.68 Aligned_cols=119 Identities=35% Similarity=0.727 Sum_probs=113.3
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
|+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPV-GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 80 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEC-CCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCc
Confidence 4578899999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|+.+|+||+++|. ++|+|+++|.+||.+|+++|.+|+|..
T Consensus 81 v~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~pn~~~ 120 (150)
T 1z2u_A 81 INSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDD 120 (150)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCCCeEeecccc-------------CCCCCCCCHHHHHHHHHHHhhCCCCCC
Confidence 9999999999996 899999999999999999999877643
No 13
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-40 Score=246.70 Aligned_cols=118 Identities=36% Similarity=0.725 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCccccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 83 (150)
+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 98 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPV-GDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNI 98 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcC
Confidence 458899999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 84 ~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
+.+|+||+++|. ++|+|+++|.+||++|+++|.+|+|..
T Consensus 99 ~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~sll~~pn~~~ 137 (166)
T 2ayv_A 99 NSQGAICLDILK-------------DQWSPALTISKVLLSISSLLTDPNPDD 137 (166)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCCeEEccccc-------------ccCCCCCcHHHHHHHHHHHHhCCCCCc
Confidence 999999999997 899999999999999999999987653
No 14
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.9e-40 Score=245.54 Aligned_cols=119 Identities=35% Similarity=0.712 Sum_probs=113.4
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
.+.+.+||++|+++|+++++.||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPn 95 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 95 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCc
Confidence 4678999999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|+.+|+||+++|. ++|+|+++|.+||++|+++|.+|+|..
T Consensus 96 V~~~G~ICl~iL~-------------~~W~P~~ti~~vL~si~~ll~~pn~~~ 135 (165)
T 2c4o_A 96 INSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDD 135 (165)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCCCeEeehhhc-------------CCCCCcCcHHHHHHHHHHHHhCCCCCc
Confidence 9999999999997 899999999999999999999887643
No 15
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-41 Score=246.69 Aligned_cols=118 Identities=31% Similarity=0.567 Sum_probs=112.5
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
|.++.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 3 s~~~~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 3 SAGLPRRIIKETQRLLAEPVPGIKAEPD-ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp SCSCCHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 4567899999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWF 134 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~ 134 (150)
|+.+|+||+++|+ ++|+|+++|.+||++|+++|.+|+|-
T Consensus 82 v~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~pn~~ 120 (154)
T 2c2v_B 82 VDKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPD 120 (154)
T ss_dssp BCTTCBBCCHHHH-------------TSCCTTCCHHHHHHHHHHHTTSCCCC
T ss_pred CccCCeEEchhcc-------------CCCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 9999999999996 89999999999999999999987764
No 16
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.5e-40 Score=242.38 Aligned_cols=115 Identities=30% Similarity=0.577 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccccCCC
Q 031910 7 SLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPD 86 (150)
Q Consensus 7 ~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 86 (150)
.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPV-PENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 589999999999999999999996 7899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 87 GKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 87 G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|+||+++|+ ++|+|+++|.+||++|+++|.+|+|..
T Consensus 82 G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~ 117 (149)
T 2r0j_A 82 GRICLDILK-------------DKWSPALQIRTVLLSIQALLSSPEPDD 117 (149)
T ss_dssp CBBCCGGGT-------------TTCCTTSCHHHHHHHHHHHHHSCCTTS
T ss_pred CEEechhcC-------------CCCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 999999996 899999999999999999999987653
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.6e-40 Score=244.32 Aligned_cols=122 Identities=26% Similarity=0.515 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
|.++.+||++|+++|+++++.||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQD-KDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPN 80 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCcccc
Confidence 5678999999999999999999999985 889999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWF 134 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~ 134 (150)
|+.+|+||+++|+.+. .++|+|+++|.+||++|+++|.+++|-
T Consensus 81 v~~~G~iCl~iL~~~~---------~~~W~p~~~i~~vL~si~~ll~~p~~~ 123 (169)
T 1yh2_A 81 IDSAGRICLDVLKLPP---------KGAWRPSLNIATVLTSIQLLMSEPNPD 123 (169)
T ss_dssp BCTTCBBCCGGGSCTT---------TSCCCTTSCHHHHHHHHHHHHHSCCTT
T ss_pred CCcCCeEecccccCCc---------ccCCCCCCcHHHHHHHHHHHHhCCCCc
Confidence 9999999999996211 278999999999999999999997764
No 18
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-40 Score=248.49 Aligned_cols=119 Identities=28% Similarity=0.480 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
++.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 106 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAFPE-SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPN 106 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEEEE-TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTT
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCc
Confidence 4668899999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|+.+|+||+++|. ++|+|+++|.+||++|+++|.+|++-.
T Consensus 107 V~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~sll~~Pn~~~ 146 (179)
T 1i7k_A 107 VDTQGNISLDILK-------------EKWSALYDVRTILLSIQSLLGEPNIDS 146 (179)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred cccCCeEEcccCc-------------CcCCCCCCHHHHHHHHHHHHhCCCCcc
Confidence 9999999999996 899999999999999999999877653
No 19
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-40 Score=243.58 Aligned_cols=122 Identities=34% Similarity=0.662 Sum_probs=112.3
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCC-C---CcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccC
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDE-S---NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~-~---n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 78 (150)
|.+|.+||+||+++|++++++|+++.+.++ | |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 567999999999999999999999998733 2 899999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 79 WHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 79 ~Hpnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|||||+.+|+||+++|.. .++|+|+++|++||++|+++|.+|++..
T Consensus 88 ~HPnV~~~G~iCl~iL~~-----------~~~W~p~~ti~~vL~~i~~ll~~P~~~~ 133 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNE-----------EEGWKPAITIKQILLGIQDLLDDPNIAS 133 (163)
T ss_dssp CSTTBCTTSBBCCGGGCT-----------TTTCCTTCCHHHHHHHHHHHHTSCCTTS
T ss_pred ccCCCCCCCcEeccccCC-----------CCCcCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999971 2469999999999999999999877653
No 20
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=4.5e-40 Score=242.17 Aligned_cols=120 Identities=32% Similarity=0.617 Sum_probs=112.4
Q ss_pred ChHHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccC
Q 031910 2 AKSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (150)
Q Consensus 2 as~~a~~RL~kEl~~l~~~---~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 78 (150)
|++.+.+||+||+++|+++ ++.|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 4578999999999999985 5789999996 78999999999999999999999999999999999999999999999
Q ss_pred cccccCC-CCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 79 WHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 79 ~Hpnv~~-~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|||||+. +|+||+++|. ++|+|+++|.+||++|+++|.+++|-.
T Consensus 84 ~HPni~~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~ 128 (159)
T 2bep_A 84 WHPNISSVTGAICLDILK-------------DQWAAAMTLRTVLLSLQALLAAAEPDD 128 (159)
T ss_dssp CBTTBCTTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CccCCCCCCCEEeChhhh-------------ccCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 9999995 9999999997 889999999999999999999987643
No 21
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2.7e-40 Score=242.91 Aligned_cols=123 Identities=30% Similarity=0.559 Sum_probs=111.5
Q ss_pred CChHHHHHHHHHHHHHHhhCCCCCeEEEecCC----CCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEec
Q 031910 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDE----SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (150)
Q Consensus 1 Mas~~a~~RL~kEl~~l~~~~~~~i~~~~~~~----~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (150)
|+ +.|.+||++|+++|++++++|+.+.+.++ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms-~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MS-SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp ---CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 55 57899999999999999999999988632 48999999999999999999999999999999999999999999
Q ss_pred cCcccccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 77 EMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 77 ~i~Hpnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
++|||||+.+|+||+++|+. .++|+|+++|.+||++|+++|.+|++-.
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 127 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNE-----------DQDWRPAITLKQIVLGVQDLLDSPNPNS 127 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCT-----------TTTCCTTCCHHHHHHHHHHHHTSCCTTC
T ss_pred CCccCCCCCCCcEeeecccC-----------CCCCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999971 1389999999999999999998876543
No 22
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2e-40 Score=241.66 Aligned_cols=116 Identities=29% Similarity=0.588 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccccCC
Q 031910 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP 85 (150)
Q Consensus 6 a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 85 (150)
+.+||++|+++|++++++|+++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 46999999999999999999999985559999999999999999999999999999999999999999999999999998
Q ss_pred -CCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccc
Q 031910 86 -DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWF 134 (150)
Q Consensus 86 -~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~ 134 (150)
+|+||+++|. ++|+|+++|.+||++|+++|.+|+|-
T Consensus 82 ~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~ 118 (149)
T 1fxt_A 82 VTGAICLDILK-------------NAWSPVITLKSALISLQALLQSPEPN 118 (149)
T ss_dssp SSCCBCCHHHH-------------TSCCTTCCHHHHHHHHHHHHHSCCSS
T ss_pred CCCeEeCCcCC-------------CCCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 9999999996 89999999999999999999988764
No 23
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.1e-40 Score=243.03 Aligned_cols=116 Identities=28% Similarity=0.590 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCccccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 83 (150)
+.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~-~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPH-DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNI 82 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCC
Confidence 356799999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcc
Q 031910 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW 133 (150)
Q Consensus 84 ~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~ 133 (150)
+.+|+||+++|. ++|+|+++|.+||.+|+++|.+|++
T Consensus 83 ~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~ 119 (155)
T 1jat_A 83 DRLGRICLDVLK-------------TNWSPALQIRTVLLSIQALLASPNP 119 (155)
T ss_dssp CTTCCBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCT
T ss_pred CCCCEEEchhhc-------------cCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 999999999996 8999999999999999999998755
No 24
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=6.5e-40 Score=241.79 Aligned_cols=123 Identities=33% Similarity=0.566 Sum_probs=113.0
Q ss_pred ChHHHHHHHHHHHHHHhhCCCCCeEEEecC----CCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEecc
Q 031910 2 AKSQASLLLQKQLKDLCKNPVDGFSAGLVD----ESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (150)
Q Consensus 2 as~~a~~RL~kEl~~l~~~~~~~i~~~~~~----~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (150)
|++.+.+||++|+++|++++++|+.+.+.. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 457899999999999999999999998862 3689999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 78 MWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 78 i~Hpnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
+|||||+.+|+||+++|+. .++|+|+++|.+||.+|+++|.+|++..
T Consensus 84 i~HPnv~~~G~iCl~iL~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 130 (161)
T 2grr_A 84 LFHPNVYPSGTVCLSILEE-----------DKDWRPAITIKQILLGIQELLNEPNIQS 130 (161)
T ss_dssp CCSTTBCTTSBBCCGGGCT-----------TTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred cccCCCCCCCeEeehhcCC-----------CCCcCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999971 1489999999999999999999876643
No 25
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.3e-40 Score=236.18 Aligned_cols=109 Identities=37% Similarity=0.691 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHhhCCCCCeEEE--ecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCc--ccc
Q 031910 7 SLLLQKQLKDLCKNPVDGFSAG--LVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW--HPN 82 (150)
Q Consensus 7 ~~RL~kEl~~l~~~~~~~i~~~--~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~--Hpn 82 (150)
.+||+||+++|++++++|+++. + +++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+++ |||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPN 102 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKS-VQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPH 102 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTC-CCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEee-CccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCcc
Confidence 4999999999999999999865 5 4889999999999999999999999999999999999999999999998 999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVL 129 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~ 129 (150)
|+.+|+||+++|. ++|+|+++|++||++|+++|.
T Consensus 103 V~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 103 VYSNGHICLSILT-------------EDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCCCeEEchhcC-------------CCCCCCCcHHHHHHHHHHHhC
Confidence 9999999999997 899999999999999999873
No 26
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.9e-40 Score=244.14 Aligned_cols=121 Identities=31% Similarity=0.539 Sum_probs=113.1
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
++.|.+||++|+++|++++++|+.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 21 ~~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 99 (169)
T 1yrv_A 21 HGRAYLLLHRDFCDLKENNYKGITAKPV-SEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPN 99 (169)
T ss_dssp GCHHHHHHHHHHHHHHHHCCTTEEEEEC-STTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTT
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCc
Confidence 4578999999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred c-CCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 83 V-YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 83 v-~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
| +.+|+||+++|+. .++|+|+++|++||++|+++|.+|++..
T Consensus 100 I~~~~G~ICL~iL~~-----------~~~WsP~~ti~~vL~sI~sll~~Pn~~~ 142 (169)
T 1yrv_A 100 VDPHTGQPCIDFLDN-----------PEKWNTNYTLSSILLALQVMLSNPVLEN 142 (169)
T ss_dssp BCTTTCCBCCHHHHC-----------GGGCCTTCCHHHHHHHHHHHHTSCCTTS
T ss_pred ccCCCCeEeehhhcC-----------CcCCCCcCCHHHHHHHHHHHHhCCCCCC
Confidence 9 7899999999951 2789999999999999999999887654
No 27
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=2.5e-39 Score=245.05 Aligned_cols=118 Identities=34% Similarity=0.681 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCccccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 83 (150)
+.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 125 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPK-GDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNI 125 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecc-cCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceE
Confidence 568899999999999999999999986 8899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 84 ~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
+.+|+||+++|. ++|+|+++|.+||++|+++|.+++|..
T Consensus 126 ~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~~ll~~pnp~~ 164 (194)
T 3bzh_A 126 NSQGVICLDILK-------------DNWSPALTISKVLLSICSLLTDCNPAD 164 (194)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCCceechhhh-------------ccCCCcCcHHHHHHHHHHHHhCCCCcc
Confidence 999999999996 899999999999999999999987764
No 28
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-39 Score=246.13 Aligned_cols=118 Identities=31% Similarity=0.625 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHhhCCC-------------CCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCC
Q 031910 4 SQASLLLQKQLKDLCKNPV-------------DGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPP 70 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~-------------~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP 70 (150)
..+.+||+||+++|+++++ .||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP 109 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIV-GGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPP 109 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEc-CCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCC
Confidence 3478999999999999887 79999997 789999999999999999999999999999999999999
Q ss_pred eEEEeccCcccccC-CCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 71 TVRFTSEMWHPNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 71 ~v~f~t~i~Hpnv~-~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
+|+|.|++|||||+ .+|+||+++|. ++|+|+++|.+||++|+++|.+|+|-.
T Consensus 110 ~V~F~T~i~HPNI~~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~sll~~pnp~~ 162 (193)
T 2f4z_A 110 KMKFVTKIWHPNISSQTGAICLDILK-------------HEWSPALTIRTALLSIQAMLADPVPTD 162 (193)
T ss_dssp EEEESSCCCBTTBCTTTCBBCCGGGT-------------TTCCTTSCHHHHHHHHHHHHHSCCTTS
T ss_pred eEEEecCCccCCCcCCCCEEECcccc-------------ccCCCCCCHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999 59999999997 889999999999999999999988754
No 29
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=6.3e-40 Score=236.34 Aligned_cols=122 Identities=28% Similarity=0.432 Sum_probs=109.0
Q ss_pred CChHHHHHHHHHHHHHHhhC-CCCCeEEEecCCC--CcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEecc
Q 031910 1 MAKSQASLLLQKQLKDLCKN-PVDGFSAGLVDES--NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (150)
Q Consensus 1 Mas~~a~~RL~kEl~~l~~~-~~~~i~~~~~~~~--n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (150)
|++.++.+||+||+++++++ ++.|+++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 77778899999999999998 7889999986444 59999999999999999999999999999999999999999999
Q ss_pred CcccccCCC-CcE--EeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccccC
Q 031910 78 MWHPNVYPD-GKV--CISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFLM 136 (150)
Q Consensus 78 i~Hpnv~~~-G~i--Cl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~~ 136 (150)
+|||||+.+ |+| |+++| ++|+|+++|++||++|+++|.+|++-..
T Consensus 82 i~HPnv~~~~G~i~~cL~~l--------------~~W~p~~~i~~vl~~i~~ll~~pn~~~p 129 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTL--------------RDWKRAYTMETLLLDLRKEMATPANKKL 129 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHH--------------HTCCTTCCHHHHHHHHHHHHTSHHHHTS
T ss_pred cccCCEeCCCCEEeeecccC--------------CCCCCcCcHHHHHHHHHHHHcCCCCCCC
Confidence 999999986 999 99998 5799999999999999999998766543
No 30
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=9.1e-40 Score=250.95 Aligned_cols=119 Identities=35% Similarity=0.688 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
++.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 99 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAHIK-DSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPN 99 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCC
Confidence 4678999999999999999999999997 789999999999999999999999999999999999999999999999999
Q ss_pred cC-CCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 83 VY-PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 83 v~-~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|+ .+|+||+++|. ++|+|+++|.+||++|+++|.+|+|-.
T Consensus 100 I~~~~G~ICL~iL~-------------~~WsP~~ti~~VL~sI~sLL~~Pnp~d 140 (216)
T 2pwq_A 100 ISSQTGAICLDVLK-------------NEWSPALTIRTALLSIQALLSDPQPDD 140 (216)
T ss_dssp BCTTTCBBCCHHHH-------------HHCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CcCCCCEEEchhhc-------------ccCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 99 59999999996 889999999999999999999988754
No 31
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=2.7e-39 Score=246.08 Aligned_cols=120 Identities=33% Similarity=0.638 Sum_probs=111.4
Q ss_pred CChHHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEecc
Q 031910 1 MAKSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (150)
Q Consensus 1 Mas~~a~~RL~kEl~~l~~~---~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (150)
|+ +.|.+||+||+++|+++ ++.|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 Ms-~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 79 (201)
T 3k9o_A 2 MA-NIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 79 (201)
T ss_dssp ---CTTHHHHHHHHHHHHTCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred Cc-HHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccC
Confidence 54 57899999999999987 3679999997 7899999999999999999999999999999999999999999999
Q ss_pred CcccccCC-CCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 78 MWHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 78 i~Hpnv~~-~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
+|||||+. +|+||+++|. ++|+|+++|.+||++|+++|.+|+|-.
T Consensus 80 i~HPnv~~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~p~p~~ 125 (201)
T 3k9o_A 80 IWHPNISSVTGAICLDILK-------------DQWAAAMTLRTVLLSLQALLAAAEPDD 125 (201)
T ss_dssp CCBTTBCTTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred cccCCCcCCCCeeeCcccc-------------cCCCCCCCHHHHHHHHHHHhcCCCCCC
Confidence 99999995 9999999996 899999999999999999999988754
No 32
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.4e-38 Score=234.30 Aligned_cols=119 Identities=26% Similarity=0.441 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCC-eEEEecCCCC--cceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcc
Q 031910 4 SQASLLLQKQLKDLCKNPVDG-FSAGLVDESN--VFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~-i~~~~~~~~n--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (150)
.++.+||+||+++|++++++| +++.+.+++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 578999999999999999888 7888765665 8999999999999999999999999999999999999999999999
Q ss_pred cccC-CCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC-Ccc
Q 031910 81 PNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN-YAW 133 (150)
Q Consensus 81 pnv~-~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~-~~~ 133 (150)
|||+ .+|+||+++|+. .++|+|+++|++||++|+++|.+ +++
T Consensus 104 PNV~~~~G~ICl~iL~~-----------~~~WsP~~ti~~vL~sI~~ll~~~pn~ 147 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISV-----------LAKWQNSYSIKVVLQELRRLMMSKENM 147 (160)
T ss_dssp TTBCTTTCBBCGGGSHH-----------HHTCCTTCCHHHHHHHHHHHHTSTTTT
T ss_pred CCEECCCCEEehhhcCC-----------ccCCCccCcHHHHHHHHHHHHccCCCC
Confidence 9999 699999999941 16899999999999999999964 443
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=7.3e-40 Score=251.33 Aligned_cols=118 Identities=29% Similarity=0.568 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccccC
Q 031910 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (150)
Q Consensus 5 ~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 84 (150)
++.+||++|+++|++++++||++.+.+++++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 46799999999999999999999998555678999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 85 ~-~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
. +|+||+++|. ++|+|++||.+||++|+++|.+|+|-.
T Consensus 82 ~~~G~ICL~iL~-------------~~WsP~~ti~~VL~sI~sLL~~Pnp~~ 120 (215)
T 1tte_A 82 SVTGAICLDILR-------------NAWSPVITLKSALISLQALLQSPEPND 120 (215)
T ss_dssp SSSSCCCSSTTT-------------CCSCTTCCHHHHHHHHHHHHTSCCCSS
T ss_pred CCCCEEECccCC-------------CCCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 9 9999999997 899999999999999999999988754
No 34
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1e-38 Score=236.57 Aligned_cols=120 Identities=26% Similarity=0.522 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCccccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 83 (150)
+.+.+||++|+++|++++++||++.+.+++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 568999999999999999999999987778999999998 8999999999999999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCC
Q 031910 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNY 131 (150)
Q Consensus 84 ~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~ 131 (150)
+.+|+||+++|... |...++|+|+++|.+||++|+++|.++
T Consensus 92 ~~~G~iCl~iL~~~-------~~~~~~W~p~~~i~~vl~~i~~ll~~~ 132 (167)
T 3fn1_B 92 TETGEICLSLLREH-------SIDGTGWAPTRTLKDVVWGLNSLFTDL 132 (167)
T ss_dssp CTTCCBCCGGGSBC-------SSSTTSBCTTCCHHHHHHHHHHTTTTT
T ss_pred CCCCEEechhhccC-------CCCCCCCCCcCcHHHHHHHHHHHHcCC
Confidence 99999999999732 122368999999999999999999883
No 35
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=7.5e-39 Score=234.70 Aligned_cols=117 Identities=32% Similarity=0.616 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccccC
Q 031910 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (150)
Q Consensus 5 ~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 84 (150)
.+.+||++|+++|++++++|+.+...+++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 378999999999999999999994335899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccc
Q 031910 85 PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWF 134 (150)
Q Consensus 85 ~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~ 134 (150)
.+|+||+++|. .++|+|+++|.+||.+|+++|.+|++-
T Consensus 83 ~~G~iCl~iL~------------~~~W~p~~~i~~vl~~i~~ll~~p~~~ 120 (155)
T 1wzv_A 83 ENGQICLPIIS------------SENWKPCTKTCQVLEALNVLVNRPNIR 120 (155)
T ss_dssp TTCBCCCGGGC------------TTTCCTTCCHHHHHHHHHHHHHSCCSS
T ss_pred CCCeEeecCCC------------ccCCCCCCcHHHHHHHHHHHHhCCCCC
Confidence 99999999993 289999999999999999999987764
No 36
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=8.5e-39 Score=234.71 Aligned_cols=119 Identities=30% Similarity=0.452 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHHHHHhhC-CCCCeEEEecCCC--CcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCc
Q 031910 3 KSQASLLLQKQLKDLCKN-PVDGFSAGLVDES--NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW 79 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~-~~~~i~~~~~~~~--n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 79 (150)
+.++.+||+||+++|+++ +++|+++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 19 IVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred cchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 356889999999999998 7889999986443 5999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcE---EeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 80 HPNVYPDGKV---CISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 80 Hpnv~~~G~i---Cl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
||||+.+|+| |+++|. +|+|+++|++||++|+++|.+|++-.
T Consensus 99 HPNV~~~G~icisCL~iL~--------------~WsP~~ti~~vL~sI~~ll~~Pn~~~ 143 (156)
T 2q0v_A 99 MSCVDNCGRVIKNNLHILK--------------NWNRNYTIETILISLRQEMLSSANKR 143 (156)
T ss_dssp CTTBCTTSBBCGGGSHHHH--------------TCCTTCCHHHHHHHHHHHTTSTTTTT
T ss_pred cCCCccCCeEehhhccccc--------------CCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 9999999999 889883 59999999999999999999887654
No 37
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.2e-38 Score=235.88 Aligned_cols=122 Identities=27% Similarity=0.454 Sum_probs=109.2
Q ss_pred ChHHHHHHHHHHHHHHhh-C-C------CC---CeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCC
Q 031910 2 AKSQASLLLQKQLKDLCK-N-P------VD---GFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPP 70 (150)
Q Consensus 2 as~~a~~RL~kEl~~l~~-~-~------~~---~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP 70 (150)
|++++.+||++|+++|++ + + +. ++.+.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 357899999999999998 4 3 33 45666746889999999999999999999999999999999999999
Q ss_pred eEEEec-cCcccccC-CCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 71 TVRFTS-EMWHPNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 71 ~v~f~t-~i~Hpnv~-~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
+|+|.| ++|||||+ .+|+||+++|+ .++|+|+++|.+||++|+++|.+|++..
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~------------~~~W~p~~~i~~vL~si~~ll~~p~~~~ 137 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILK------------PEEWTPVWDLLHCVHAVWRLLREPVCDS 137 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGS------------TTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccC------------CCCCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 999999 99999995 79999999996 3799999999999999999999877653
No 38
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-38 Score=233.85 Aligned_cols=116 Identities=29% Similarity=0.510 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCccccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 83 (150)
+.+.+||++|+++| ++++|+++...+++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 57899999999999 57789999844589999999998 9999999999999999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 84 ~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
+.+|+||+++|. ++|+|+++|.+||.+|+++|.+|++-.
T Consensus 82 ~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~Pn~~~ 120 (160)
T 1y8x_A 82 DLEGNVCLNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPED 120 (160)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCCSS
T ss_pred CCCCeEEcccch-------------hhccCCCCHHHHHHHHHHHHhCCCCCC
Confidence 999999999997 899999999999999999999877654
No 39
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=8.9e-39 Score=234.07 Aligned_cols=116 Identities=32% Similarity=0.629 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccccCC
Q 031910 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP 85 (150)
Q Consensus 6 a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 85 (150)
|.+||++|+++|++++++|+.+.+.+++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 67999999999999999999877666889999999998 99999999999999999999999999999999999999999
Q ss_pred CCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccc
Q 031910 86 DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWF 134 (150)
Q Consensus 86 ~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~ 134 (150)
+|+||+++|. .++|+|+++|.+||++|+++|.+|++-
T Consensus 82 ~G~iCl~iL~------------~~~W~p~~~i~~vl~~i~~ll~~p~~~ 118 (154)
T 1c4z_D 82 KGQVCLPVIS------------AENWKPATKTDQVIQSLIALVNDPQPE 118 (154)
T ss_dssp TCBBCCTTTS------------SSSCCTTCCHHHHHHHHHHHHHSCCCS
T ss_pred CCEEECCCCC------------CCCCCCCCcHHHHHHHHHHHHcCCCCC
Confidence 9999999995 379999999999999999999987664
No 40
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=3.8e-38 Score=246.81 Aligned_cols=119 Identities=32% Similarity=0.624 Sum_probs=112.2
Q ss_pred hHHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCc
Q 031910 3 KSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW 79 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~---~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 79 (150)
++.|.+||++|+++|+++ ++.||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 55 s~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~-~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 468999999999999987 4689999997 789999999999999999999999999999999999999999999999
Q ss_pred ccccCC-CCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 80 HPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 80 Hpnv~~-~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
||||+. +|+||+++|. ++|+|+++|.+||++|+++|.+|+|-.
T Consensus 134 HPNV~~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~~ll~~pnp~~ 177 (253)
T 3e46_A 134 HPNISSVTGAICLDILK-------------DQWAAAMTLRTVLLSLQALLAAAEPDD 177 (253)
T ss_dssp BTTBCTTTCBBCCGGGT-------------TCCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred cCCccCCCCeeeccccc-------------CCCCCCCCHHHHHHHHHHHhcCCCCCC
Confidence 999995 9999999996 899999999999999999999988754
No 41
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-38 Score=236.60 Aligned_cols=117 Identities=28% Similarity=0.473 Sum_probs=109.3
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
++.+.+||++|+++| ++++|+++.+.+++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPN 100 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 100 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCC
Confidence 467899999999999 57889999844589999999998 999999999999999999999999999999999999999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
|+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++-.
T Consensus 101 V~~~G~iCl~iL~-------------~~W~p~~~i~~vL~si~~ll~~Pn~~~ 140 (180)
T 2nvu_C 101 IDLEGNVALNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPED 140 (180)
T ss_dssp BCTTSBBCCGGGT-------------TSCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCCCcEEccccc-------------ccCCCCCCHHHHHHHHHHHHhCCCCCC
Confidence 9999999999997 899999999999999999999877654
No 42
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=234.04 Aligned_cols=119 Identities=26% Similarity=0.441 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCC-eEEEecCCCC--cceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcc
Q 031910 4 SQASLLLQKQLKDLCKNPVDG-FSAGLVDESN--VFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~-i~~~~~~~~n--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (150)
.++.+||+||+++|++++++| +++.+.+++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 458899999999999998888 6787755664 9999999999999999999999999999999999999999999999
Q ss_pred cccC-CCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC-Ccc
Q 031910 81 PNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN-YAW 133 (150)
Q Consensus 81 pnv~-~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~-~~~ 133 (150)
|||+ .+|+||+++|+. .++|+|+++|++||++|+++|.+ +++
T Consensus 114 PNV~~~~G~ICl~iL~~-----------~~~WsP~~ti~~vL~sI~~ll~~~pn~ 157 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISV-----------LAKWQNSYSIKVVLQELRRLMMSKENM 157 (170)
T ss_dssp SSBCSSSCBBCTTTCHH-----------HHTCCSSCCHHHHHHHHHHHHHSTTTS
T ss_pred CCEeCCCCEEEhhhcCC-----------CCCCCccCcHHHHHHHHHHHHccCCCC
Confidence 9999 699999999841 16899999999999999999975 443
No 43
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-37 Score=232.22 Aligned_cols=123 Identities=24% Similarity=0.495 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccc
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (150)
++++.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |||
T Consensus 12 ~~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~ 88 (187)
T 2f4w_A 12 PTTATQRLKQDYLRIKKDPVPYICAEPL-PSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGR 88 (187)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSS
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cce
Confidence 4568899999999999999999999986 8899999999999999999999999999999999999999999998 999
Q ss_pred cCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccccCch
Q 031910 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFLMNA 138 (150)
Q Consensus 83 v~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~~~~ 138 (150)
|+.+|+||+++|.. +.++|+|+++|.+||.+|+++|.+++|...+.
T Consensus 89 ~~~~G~ICL~iL~~----------~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~ 134 (187)
T 2f4w_A 89 FKCNTRLCLSITDF----------HPDTWNPAWSVSTILTGLLSFMVEKGPTLGSI 134 (187)
T ss_dssp BCTTSCBC--------------------CCTTCCHHHHHHHHHHHHHSCCCCTTBC
T ss_pred eccCCeEeeecccc----------CccCCCCcCcHHHHHHHHHHHhcCCCCCCccc
Confidence 99999999999941 12899999999999999999999999875443
No 44
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=246.04 Aligned_cols=135 Identities=30% Similarity=0.461 Sum_probs=120.1
Q ss_pred ChHHHHHHHHHHHHHHhhCCCCC----eEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEecc
Q 031910 2 AKSQASLLLQKQLKDLCKNPVDG----FSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (150)
Q Consensus 2 as~~a~~RL~kEl~~l~~~~~~~----i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (150)
+++.+.+||++|+++|++++++| +.+.+. ++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~-ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~ 151 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRCD-EERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETT 151 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEE-SSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCS
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeeccc-CCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEecc
Confidence 45789999999999999988875 445554 8899999999999999999999999999999999999999999998
Q ss_pred -----CcccccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccC-cHHHHHHHHHHhhcCCccccCchhhhhh
Q 031910 78 -----MWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVH-TAASVWRSLSPGVLNYAWFLMNAGYEYV 143 (150)
Q Consensus 78 -----i~Hpnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~-~l~~il~~I~~~l~~~~~~~~~~~~~~~ 143 (150)
+|||||+.+|+||+++|.++++ ...++|+|++ +|.+||++|+++|.+++|+.++.+++..
T Consensus 152 ~g~~~ifHPNV~~~G~ICLsiL~~~~g------~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a 217 (323)
T 3ceg_A 152 GGHSVRFNPNLYNDGKVCLSILNTWHG------RPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERS 217 (323)
T ss_dssp TTTTCCCBTTBCTTCBBCCGGGTSSCC------CGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGG
T ss_pred CCCcccccCCCCcCCeEechhhccccC------CCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHH
Confidence 9999999999999999973321 1237999999 8999999999999999999999888754
No 45
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=1.2e-37 Score=234.38 Aligned_cols=121 Identities=23% Similarity=0.461 Sum_probs=112.1
Q ss_pred ChHHHHHHHHHHHHHHhhCC---CCCeEEEecCCCCcceEEEEEeCC-CCCCCCC-----------CeEEEEEecCCCCC
Q 031910 2 AKSQASLLLQKQLKDLCKNP---VDGFSAGLVDESNVFEWSVSIIGP-PDTLYEG-----------GFFNAIMTFPDNYP 66 (150)
Q Consensus 2 as~~a~~RL~kEl~~l~~~~---~~~i~~~~~~~~n~~~w~~~i~gp-~~tpy~g-----------g~f~~~i~fp~~YP 66 (150)
++.+|.+||++|+++|++++ +.++++.+. ++|+++|+++|.|| ++|||+| |.|+++|.||++||
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~-~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELI-NDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEE-TTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEc-CCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 45789999999999999988 688999987 78999999999997 9999998 89999999999999
Q ss_pred CCCCeEEEeccCccc-ccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 67 VSPPTVRFTSEMWHP-NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 67 ~~pP~v~f~t~i~Hp-nv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
++||+|+|.+++||| ||+.+|+||+++|. .++|+|+++|++||++|+++|.++++..
T Consensus 103 ~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~------------~~~WsP~~ti~~VL~sI~slL~~p~a~~ 160 (186)
T 1zuo_A 103 FDPPFVRVVLPVLSGGYVLGGGALCMELLT------------KQGWSSAYSIESVIMQINATLVKGKARV 160 (186)
T ss_dssp SSCCEEEEEESCEESTTBCGGGBBCCGGGS------------TTTCCTTSCHHHHHHHHHHHHHHTTCEE
T ss_pred CCCCeEEEeCCccCCCccCCCCcEEeccCC------------CCCCCCcCcHHHHHHHHHHHHcCCChhH
Confidence 999999999999999 69999999999996 3799999999999999999999876643
No 46
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=4.8e-38 Score=229.85 Aligned_cols=114 Identities=27% Similarity=0.545 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccccC
Q 031910 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (150)
Q Consensus 5 ~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 84 (150)
+|.+||+||+++|+++ |+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~ 77 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELN-NGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVD 77 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEc-cCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCc
Confidence 4679999999999874 7888886 78999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHH-HHHhhcCCcccc
Q 031910 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRS-LSPGVLNYAWFL 135 (150)
Q Consensus 85 ~-~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~-I~~~l~~~~~~~ 135 (150)
. +|+||+++|. ++|+|+++|.+||.+ |+++|.+|++..
T Consensus 78 ~~~G~iCl~il~-------------~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~ 117 (152)
T 2onu_A 78 EASGSVCLDVIN-------------QTWTPLYSLVNVFEVFLPQLLTYPNPSD 117 (152)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCHHHHHHTHHHHHHHSCCCSS
T ss_pred CcCCeEeccccc-------------ccCCCCCCHHHHHHHHHHHHHhCCCCCC
Confidence 5 9999999996 889999999999999 689998876543
No 47
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=232.68 Aligned_cols=112 Identities=23% Similarity=0.555 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccccC
Q 031910 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (150)
Q Consensus 5 ~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 84 (150)
+|.+||+||+++|++ .|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~--ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~ 99 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL--GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNID 99 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE--EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC--CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCC
Confidence 689999999999985 57888886 4789999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHH-HHHhhcCCccc
Q 031910 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRS-LSPGVLNYAWF 134 (150)
Q Consensus 85 ~-~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~-I~~~l~~~~~~ 134 (150)
. +|+||+++|. ++|+|+++|++||++ |+++|.+|+|-
T Consensus 100 ~~~G~ICL~iL~-------------~~WsP~~ti~~iL~s~I~~Ll~~Pn~~ 138 (179)
T 2z5d_A 100 EASGTVCLDVIN-------------QTWTALYDLTNIFESFLPQLLAYPNPI 138 (179)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCTTHHHHTHHHHHHHSCCCS
T ss_pred CCCCeEeccccc-------------cCCCCCCCHHHHHHHHHHHHHhCCCCC
Confidence 8 9999999996 899999999999999 99999988764
No 48
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.2e-36 Score=229.64 Aligned_cols=117 Identities=26% Similarity=0.418 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEe---cCCCCcc---eEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEec
Q 031910 3 KSQASLLLQKQLKDLCKNPVDGFSAGL---VDESNVF---EWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (150)
Q Consensus 3 s~~a~~RL~kEl~~l~~~~~~~i~~~~---~~~~n~~---~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (150)
+++|.+||++|+++|+ +++|+++.. .+++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|
T Consensus 27 ~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 103 (190)
T 3o2u_A 27 LSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLK 103 (190)
T ss_dssp CCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECS
T ss_pred ccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEec
Confidence 3678999999999998 778999983 4589999 9999997 88899999999999999999999999999999
Q ss_pred cCcccccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 77 EMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 77 ~i~Hpnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
++|||||+.+|+||+++|. ++|+|+++|++||++|+++|.+|+|-.
T Consensus 104 ~i~HPnV~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~pn~~~ 149 (190)
T 3o2u_A 104 KIFHPNIDLKGNVCLNILR-------------EDWSPALDLQSIITGLLFLFLEPNPND 149 (190)
T ss_dssp CCCCTTBCTTSBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CcccCCCCCCCeEechhcc-------------CCCCCCCCHHHHHHHHHHHHhCCCCCc
Confidence 9999999999999999997 899999999999999999999987754
No 49
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.5e-36 Score=251.51 Aligned_cols=118 Identities=34% Similarity=0.686 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCccccc
Q 031910 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (150)
Q Consensus 4 ~~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 83 (150)
+.|.+||+||+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 80 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 80 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecccccccc
Confidence 578999999999999999999999997 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCcccc
Q 031910 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 84 ~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~ 135 (150)
+.+|+||+++|. ++|+|+++|++||++|+++|.+|+|-.
T Consensus 81 ~~~G~iCl~il~-------------~~W~p~~~i~~vL~~i~~ll~~pnp~~ 119 (399)
T 4ddg_A 81 NSNGSISLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDD 119 (399)
T ss_dssp CTTCBBCCGGGT-------------TSCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCCeEeCcccc-------------cCCCccccHHHHHHHHHHHHcCCCCCc
Confidence 999999999996 899999999999999999999988764
No 50
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=6e-37 Score=227.10 Aligned_cols=115 Identities=26% Similarity=0.530 Sum_probs=104.9
Q ss_pred CChHHHHHHHHHHHHHHhhCC------------CCCeEEEecCCCCcceEEEEEeCCCCCCCC--CCeEEEEEecCCCCC
Q 031910 1 MAKSQASLLLQKQLKDLCKNP------------VDGFSAGLVDESNVFEWSVSIIGPPDTLYE--GGFFNAIMTFPDNYP 66 (150)
Q Consensus 1 Mas~~a~~RL~kEl~~l~~~~------------~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~--gg~f~~~i~fp~~YP 66 (150)
|+ +.+.+||++|+++|++++ +.++.+.+. ++|+++|+++|.||++|||+ ||.|+++|.||++||
T Consensus 5 Ms-~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP 82 (167)
T 4ds2_A 5 MK-NISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVD-TDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYP 82 (167)
T ss_dssp CC-CCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEE-ESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTT
T ss_pred cc-HHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeC-CCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCC
Confidence 44 578899999999999977 678999885 89999999999999999999 999999999999999
Q ss_pred CCCCeEEEeccCcccccCCCCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHH-HHHHhhcC
Q 031910 67 VSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWR-SLSPGVLN 130 (150)
Q Consensus 67 ~~pP~v~f~t~i~Hpnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~-~I~~~l~~ 130 (150)
++||+|+|.|++|||||+.+|+||+++|. ++|+|+++++++|+ .|++++..
T Consensus 83 ~~pP~v~f~t~i~HPnv~~~G~iCl~il~-------------~~W~p~~~i~~vll~~l~~l~~~ 134 (167)
T 4ds2_A 83 HEPPTVRFVTPVYSPLVTGEGGICDRMVN-------------DFWTPDQHASDVIKLVLDRVFSQ 134 (167)
T ss_dssp TSCCEEEESSCCCCSSCCTTSCCCTHHHH-------------TTCCTTSCHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEeCCcccccCCCCCEEEcccCc-------------CCCCCCCChHHHHHHHHHHHHhc
Confidence 99999999999999999999999999996 89999999999765 45666654
No 51
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=5.4e-37 Score=228.17 Aligned_cols=113 Identities=23% Similarity=0.465 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccccC
Q 031910 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (150)
Q Consensus 5 ~a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 84 (150)
++.+||++|+++|++++. ++ +. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~-~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~ 86 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YP-SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVD 86 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EE-CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CC-CCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCc
Confidence 578999999999999873 33 33 78999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHH-HHhhcCCcccc
Q 031910 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSL-SPGVLNYAWFL 135 (150)
Q Consensus 85 ~-~G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I-~~~l~~~~~~~ 135 (150)
. +|+||+++|. ++|+|+++|++||++| +++|.+|++..
T Consensus 87 ~~~G~iCl~iL~-------------~~W~p~~~i~~vL~sil~~ll~~Pn~~~ 126 (171)
T 1yf9_A 87 ERSGSVCLDVIN-------------QTWTPMYQLENIFDVFLPQLLRYPNPSD 126 (171)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCTHHHHHTHHHHHHHSCCSSC
T ss_pred ccCCeEeccccc-------------cCCCCCCcHHHHHHHHHHHHHhCCCCCC
Confidence 5 9999999996 8999999999999998 78998776543
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.94 E-value=9.4e-29 Score=180.90 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCC----------eEEEEEecCCCCCCCCCeEEEe
Q 031910 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGG----------FFNAIMTFPDNYPVSPPTVRFT 75 (150)
Q Consensus 6 a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f~ 75 (150)
-.+||++|++.|++ ++.+. ++|++.|.+.+.||+||+|+|| .|.+++.||++||++||+|+|.
T Consensus 33 w~~RL~eE~k~L~k------~v~p~-k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~ 105 (172)
T 2z6o_A 33 WVQRLKEEYQSLIR------YVENN-KNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVP 105 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHH-HHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHH------HhccC-ccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeC
Confidence 38999999999988 24554 7799999999999999999999 9999999999999999999999
Q ss_pred cc-CcccccCCCCcEEeccCCCCCCCCCCCCCCCC---CCCccCcHHHHHH
Q 031910 76 SE-MWHPNVYPDGKVCISILHPPGDDPNGYELATE---RWTPVHTAASVWR 122 (150)
Q Consensus 76 t~-i~Hpnv~~~G~iCl~~L~~~~~~~~~~~~~~~---~W~P~~~l~~il~ 122 (150)
+. ++||||+.+|+|||++|. +. .|+|+++|..+|.
T Consensus 106 ~~~~~hpnmY~~G~ICLdIL~------------kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 106 ELDGKTAKMYRGGKICLTDHF------------KPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp GGTTTCSSBCTTSBBCCCTTH------------HHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCCCcEechhhc------------cccccccCCccCHHHHHh
Confidence 98 999999999999999994 13 4559999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.79 E-value=2.8e-19 Score=131.30 Aligned_cols=112 Identities=20% Similarity=0.175 Sum_probs=91.6
Q ss_pred HHHHHHHHHHhhCCC---CCeEEEecCCCCcceEEEEEeCCCCCCCCCCe---EEEEEecCCCCCCCCCeEEEec-----
Q 031910 8 LLLQKQLKDLCKNPV---DGFSAGLVDESNVFEWSVSIIGPPDTLYEGGF---FNAIMTFPDNYPVSPPTVRFTS----- 76 (150)
Q Consensus 8 ~RL~kEl~~l~~~~~---~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~---f~~~i~fp~~YP~~pP~v~f~t----- 76 (150)
+|..+|+..+.+.-+ +...+... +|...++.+.+.|.-..+|+|+. |.+.|-||++||++||.|.|.+
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~-~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTH-SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEC-TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEc-CCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 577788887765332 22333333 56777888888888889999998 8899999999999999998855
Q ss_pred --c---Cc-ccccCCCCcEEeccCCCCCCCCCCCCCCCCCCCc-cCcHHHHHHHHHHhhcCCccc
Q 031910 77 --E---MW-HPNVYPDGKVCISILHPPGDDPNGYELATERWTP-VHTAASVWRSLSPGVLNYAWF 134 (150)
Q Consensus 77 --~---i~-Hpnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P-~~~l~~il~~I~~~l~~~~~~ 134 (150)
+ ++ ||||+.+|+||+++| ++|+| +.+|.++|.+|+++|.+|+|-
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL--------------~~W~p~~s~L~~ll~~l~~lf~ep~~d 160 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPIL--------------HAWDPAAMNLIMVVQELMSLLHEPPQD 160 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGG--------------GSCCGGGCCHHHHHHHHHHTTSCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCccc--------------ccCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 1 67 999999999999999 56999 689999999999999998874
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.77 E-value=1.5e-20 Score=134.88 Aligned_cols=82 Identities=20% Similarity=0.342 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCC----------eEEEEEecCCCCCCCCCeEEEe
Q 031910 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGG----------FFNAIMTFPDNYPVSPPTVRFT 75 (150)
Q Consensus 6 a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f~ 75 (150)
=.+||++||+.| |.+...+..+-..|...+.||+||+|+|+ .|.++++||.+||.+||+|+|.
T Consensus 35 w~~RlkeEy~al-------I~yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp 107 (168)
T 3kpa_A 35 WTARLKEEYASL-------ITYVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALP 107 (168)
T ss_dssp HHHHHHHHHHHH-------HHHHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHH-------HHHHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecc
Confidence 468999999998 33322334556789999999999999999 9999999999999999999999
Q ss_pred cc-CcccccCCCCcEEeccC
Q 031910 76 SE-MWHPNVYPDGKVCISIL 94 (150)
Q Consensus 76 t~-i~Hpnv~~~G~iCl~~L 94 (150)
+. .+|||++.+|+|||+++
T Consensus 108 ~ldgkt~kmYr~GkICLdIh 127 (168)
T 3kpa_A 108 ELEGKTVKMYRGGKICMTTH 127 (168)
T ss_dssp GGTTTCSSEETTTEECCCTT
T ss_pred cccCcCccccCCCcEEeccc
Confidence 95 89999999999999865
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.55 E-value=6.5e-15 Score=106.32 Aligned_cols=107 Identities=16% Similarity=0.234 Sum_probs=83.4
Q ss_pred HHHHHHHHhhCCCC-CeEEEe--cCCCCcceEEEEEeCCCCCCCCCCeEEE--EEecCCCCCCCCCeEEEecc------C
Q 031910 10 LQKQLKDLCKNPVD-GFSAGL--VDESNVFEWSVSIIGPPDTLYEGGFFNA--IMTFPDNYPVSPPTVRFTSE------M 78 (150)
Q Consensus 10 L~kEl~~l~~~~~~-~i~~~~--~~~~n~~~w~~~i~gp~~tpy~gg~f~~--~i~fp~~YP~~pP~v~f~t~------i 78 (150)
..+|+..+.+.-+. ...... -...++..|..+|. .+|+|+.|.+ .|-||++||++||.| |.++ .
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~ 99 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIK 99 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEEC
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEEC
Confidence 45566666544321 111111 11357889999996 6899999985 889999999999999 6665 4
Q ss_pred cccccCCCCcEEeccCCCCCCCCCCCCCCCCCCCc-cCcHHHHHHHHHHhhcCCcccc
Q 031910 79 WHPNVYPDGKVCISILHPPGDDPNGYELATERWTP-VHTAASVWRSLSPGVLNYAWFL 135 (150)
Q Consensus 79 ~Hpnv~~~G~iCl~~L~~~~~~~~~~~~~~~~W~P-~~~l~~il~~I~~~l~~~~~~~ 135 (150)
.||||+.+|+||++.|+ +|++ ..+|.+++..+++.|..+.|.+
T Consensus 100 ~~~~Vd~~G~i~lpyL~--------------~W~~~~snL~~ll~~l~~~F~~epPv~ 143 (146)
T 3obq_A 100 TGKHVDANGKIYLPYLH--------------EWKHPQSDLLGLIQVMIVVFGDEPPVF 143 (146)
T ss_dssp CBTTBCTTCBBCCHHHH--------------TCCTTTCCHHHHHHHHHHHHHHSCSEE
T ss_pred CCCCCCCCCCEeccccc--------------ccCCCCCCHHHHHHHHHHHHhhCCCCc
Confidence 89999999999999994 4998 8899999999999999887764
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.97 E-value=0.0066 Score=41.68 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEec
Q 031910 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (150)
Q Consensus 6 a~~RL~kEl~~l~~~~~~~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (150)
...+...|+..|..--+..+.+ . .+....+.+.|....+..-+.-.+.+.|.||++||.+||.|.+.+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~--~-~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTV--L-SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEE--C-CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEE--c-cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3466788999988766555544 2 223466777775322222233478899999999999999998866
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.55 E-value=0.01 Score=43.95 Aligned_cols=90 Identities=14% Similarity=0.247 Sum_probs=67.1
Q ss_pred HHHHHHHHHHhhCCCCCeE-EEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEeccCcccccCCC
Q 031910 8 LLLQKQLKDLCKNPVDGFS-AGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPD 86 (150)
Q Consensus 8 ~RL~kEl~~l~~~~~~~i~-~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 86 (150)
.+|.+|+.++ |+. +.-. ++++....+++.... |....++|.++.+||.++|.+..--|. |.
T Consensus 4 ~~li~Ei~~i------GW~~l~~i-d~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~---- 65 (186)
T 3zqs_A 4 SSLIEEIGTL------GWDKLVYA-DTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF---- 65 (186)
T ss_dssp CSHHHHHHHH------CGGGEEEE-CTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC----
T ss_pred HHHHHHHHHh------CCceeeee-cCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc----
Confidence 3688999998 533 2233 457888888887433 578889999999999999987654442 11
Q ss_pred CcEEeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCCccccC
Q 031910 87 GKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAWFLM 136 (150)
Q Consensus 87 G~iCl~~L~~~~~~~~~~~~~~~~W~P~~~l~~il~~I~~~l~~~~~~~~ 136 (150)
.-.|+|..++.+++.+++..|..-.+|..
T Consensus 66 ---------------------~~~w~~~ssL~~v~~qF~~~Le~lq~Fwd 94 (186)
T 3zqs_A 66 ---------------------CASWTPQSSLISIYSQFLAAIESLKAFWD 94 (186)
T ss_dssp ---------------------CCCCCTTCCHHHHHHHHHHHHHHTHHHHH
T ss_pred ---------------------ccccCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 15699999999999999998877666654
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.37 E-value=0.013 Score=40.13 Aligned_cols=70 Identities=13% Similarity=0.202 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEEecCC-CCcceEEEEEeCCCCCCCC--CCeEEEEEecCCCCCCCCCeEEEecc
Q 031910 8 LLLQKQLKDLCKNPVDGFSAGLVDE-SNVFEWSVSIIGPPDTLYE--GGFFNAIMTFPDNYPVSPPTVRFTSE 77 (150)
Q Consensus 8 ~RL~kEl~~l~~~~~~~i~~~~~~~-~n~~~w~~~i~gp~~tpy~--gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (150)
.+...|+..|+.--...+...-... .....+.+.+..+.+..-+ .-.+.+.|.||++||..+|.|.+.+.
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4678899988876665665532100 2345566666532221111 24688999999999999999998773
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.20 E-value=0.062 Score=37.19 Aligned_cols=68 Identities=10% Similarity=0.191 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCC-------CCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEecc
Q 031910 7 SLLLQKQLKDLCKNPVDGFSAGLVDE-------SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (150)
Q Consensus 7 ~~RL~kEl~~l~~~~~~~i~~~~~~~-------~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (150)
..+...|+..|..--...+.. .+. +....+.+.|....+ .-..-.+.+.|.+|++||..||.|.+.+.
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~--~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDDFTD--LTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHTTSSSSEEC--CSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHHHChhhhee--cccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 456778888887765544433 212 134677888874322 11234788999999999999999998763
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.22 E-value=0.034 Score=38.10 Aligned_cols=68 Identities=15% Similarity=0.145 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhhCCCC--CeEEEecCCCCcceEEEEEeCCCCCCCCCCeEEEEEecCCCCCCCCCeEEEec
Q 031910 8 LLLQKQLKDLCKNPVD--GFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (150)
Q Consensus 8 ~RL~kEl~~l~~~~~~--~i~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (150)
.+...|+..|+.--.. .+.+.-....+...+.+.+.... ..=..-.+.+.|.+|++||..+|.|.+.+
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~-~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEG-FMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCT-TTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCC-CCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 3567788888764332 34321111123467888886322 11012478999999999999999997654
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.79 E-value=0.34 Score=33.22 Aligned_cols=68 Identities=15% Similarity=0.092 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCCC-----CcceEEEEEeCCCC-CCC-CCCeEEEEEecCCCCCCCCCeEEEec
Q 031910 7 SLLLQKQLKDLCKNPVDGFSAGLVDES-----NVFEWSVSIIGPPD-TLY-EGGFFNAIMTFPDNYPVSPPTVRFTS 76 (150)
Q Consensus 7 ~~RL~kEl~~l~~~~~~~i~~~~~~~~-----n~~~w~~~i~gp~~-tpy-~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (150)
..+...|+..|+.--...+...-. .. ....+.+.+. +.+ +-- ..-.+.+.|.||++||..+|.|.+..
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~-~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRP-DARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCC-CCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccC-cccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 456788998887765555544211 11 1356667775 222 100 12468899999999999999998854
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.78 E-value=0.33 Score=34.35 Aligned_cols=69 Identities=13% Similarity=0.062 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhhCCC--CCeEEEec-----------C-CCC-c--ceEEEEEeCCCCCCCCCCeEEEEEecCCCCCC
Q 031910 5 QASLLLQKQLKDLCKNPV--DGFSAGLV-----------D-ESN-V--FEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPV 67 (150)
Q Consensus 5 ~a~~RL~kEl~~l~~~~~--~~i~~~~~-----------~-~~n-~--~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 67 (150)
....+-..|+..|..--+ ..+.+.-. + ..+ . ..+.+.+.- .+ + ...+.++|.+|++||.
T Consensus 14 ~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~-~~-~--~~~i~L~v~lP~~YP~ 89 (154)
T 2daw_A 14 ESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQI-EE-P--KVKIDLQVTMPHSYPY 89 (154)
T ss_dssp HHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEE-TT-T--TEEEEEEEEECSSTTS
T ss_pred hhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEec-CC-C--CceEEEEEEcCCCCCC
Confidence 345566778888876544 34544200 0 001 1 355554432 11 1 1378999999999999
Q ss_pred CCCeEEEecc
Q 031910 68 SPPTVRFTSE 77 (150)
Q Consensus 68 ~pP~v~f~t~ 77 (150)
.+|.|...+.
T Consensus 90 ~~P~i~l~~~ 99 (154)
T 2daw_A 90 LALQLFGRSS 99 (154)
T ss_dssp SCCEEEEECS
T ss_pred CCCcEEEEeC
Confidence 9999998774
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.50 E-value=0.18 Score=35.56 Aligned_cols=24 Identities=25% Similarity=0.483 Sum_probs=21.6
Q ss_pred eEEEEEecCCCCCCCCCeEEEecc
Q 031910 54 FFNAIMTFPDNYPVSPPTVRFTSE 77 (150)
Q Consensus 54 ~f~~~i~fp~~YP~~pP~v~f~t~ 77 (150)
.+.+.|.+|++||..||.|.+...
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999998774
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=47.45 E-value=17 Score=17.33 Aligned_cols=21 Identities=24% Similarity=0.246 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCe
Q 031910 5 QASLLLQKQLKDLCKNPVDGF 25 (150)
Q Consensus 5 ~a~~RL~kEl~~l~~~~~~~i 25 (150)
....||.-|+...+.+++.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 356799999999999988764
No 65
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=29.89 E-value=42 Score=18.13 Aligned_cols=14 Identities=7% Similarity=0.154 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHh
Q 031910 5 QASLLLQKQLKDLC 18 (150)
Q Consensus 5 ~a~~RL~kEl~~l~ 18 (150)
...+||..|++++.
T Consensus 28 ~~~~~~~~~~~~~~ 41 (42)
T 3g9r_A 28 SKIKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 46789999999885
No 66
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=27.25 E-value=61 Score=23.84 Aligned_cols=26 Identities=19% Similarity=0.354 Sum_probs=22.2
Q ss_pred CCCeEEEEEecCCCCCC-----CCCeEEEec
Q 031910 51 EGGFFNAIMTFPDNYPV-----SPPTVRFTS 76 (150)
Q Consensus 51 ~gg~f~~~i~fp~~YP~-----~pP~v~f~t 76 (150)
+.|.|.|+-.+|--||. .||.|.|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 46899999999999998 788887764
No 67
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=23.39 E-value=41 Score=21.45 Aligned_cols=12 Identities=25% Similarity=0.329 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHH
Q 031910 6 ASLLLQKQLKDL 17 (150)
Q Consensus 6 a~~RL~kEl~~l 17 (150)
-.||+|+|++-|
T Consensus 63 QLKRvQRdlrGL 74 (87)
T 2rf4_B 63 QLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHhhcCC
Confidence 568999999987
Done!