BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031921
(150 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|12230258|sp|Q43582.1|LSM4_TOBAC RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4;
AltName: Full=Glycine-rich protein 10; Short=GRP 10
gi|790473|emb|CAA58702.1| unnamed protein product [Nicotiana tabacum]
Length = 146
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/121 (90%), Positives = 114/121 (94%), Gaps = 1/121 (0%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR-GREDGASGRQTKGIGRGLD 119
+RGNTIKYLRVPDEVIDKVQEE KSR+DRKPPGVGR R R GR+D A GRQ KGIGRG+D
Sbjct: 61 VRGNTIKYLRVPDEVIDKVQEEAKSRTDRKPPGVGRARARGGRDDSAVGRQPKGIGRGMD 120
Query: 120 D 120
D
Sbjct: 121 D 121
>gi|147768838|emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
Length = 3804
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/119 (95%), Positives = 117/119 (98%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI
Sbjct: 3656 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 3715
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
RGNTIKYLRVPDEVIDKVQEETK+R+DRKPPGVGRGRGRGREDG+SGR KGIGRGLDD
Sbjct: 3716 RGNTIKYLRVPDEVIDKVQEETKNRADRKPPGVGRGRGRGREDGSSGRPAKGIGRGLDD 3774
>gi|297743868|emb|CBI36838.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/120 (95%), Positives = 118/120 (98%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 47 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 106
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETK+R+DRKPPGVGRGRGRGREDG+SGR KGIGRGLDD
Sbjct: 107 IRGNTIKYLRVPDEVIDKVQEETKNRADRKPPGVGRGRGRGREDGSSGRPAKGIGRGLDD 166
>gi|225437330|ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Vitis vinifera]
Length = 150
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/120 (95%), Positives = 118/120 (98%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETK+R+DRKPPGVGRGRGRGREDG+SGR KGIGRGLDD
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKNRADRKPPGVGRGRGRGREDGSSGRPAKGIGRGLDD 120
>gi|357511251|ref|XP_003625914.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|357516335|ref|XP_003628456.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|355500929|gb|AES82132.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|355522478|gb|AET02932.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
Length = 150
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/122 (94%), Positives = 116/122 (95%), Gaps = 3/122 (2%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED--GASGRQTKGIGRGL 118
IRGNTIKYLRVPDEVIDKVQEE KSR+DRKPPGVGRGRGRGRED GA GRQTKG GRG
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEE-KSRTDRKPPGVGRGRGRGREDAAGAGGRQTKGTGRGF 119
Query: 119 DD 120
DD
Sbjct: 120 DD 121
>gi|77745469|gb|ABB02633.1| glycine rich protein-like [Solanum tuberosum]
gi|82623401|gb|ABB87115.1| glycine rich protein-like [Solanum tuberosum]
Length = 147
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/122 (86%), Positives = 111/122 (90%), Gaps = 2/122 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP--GVGRGRGRGREDGASGRQTKGIGRGL 118
IRGNTIKYLRVPDEVIDKVQEETKSR DRKPP G GR++GA+GRQ KGIGRG+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRGDRKPPGVGGRGRGRGGRDEGAAGRQAKGIGRGM 120
Query: 119 DD 120
+D
Sbjct: 121 ED 122
>gi|12230329|sp|Q9ZRU9.1|LSM4_FAGSY RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4;
AltName: Full=Glycine-rich protein 2
gi|3927916|emb|CAA10233.1| glycine-rich protein 2 [Fagus sylvatica]
Length = 148
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/138 (82%), Positives = 121/138 (87%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKSGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPDCY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPPGVGRGRGRGRE+G+ RQ +G GR +
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREEGSGARQVRGAGRDVMM 120
Query: 121 GGAKGAGGGRGRGGPGGK 138
AK RGRG GK
Sbjct: 121 QVAKAWVEVRGRGASAGK 138
>gi|449529475|ref|XP_004171725.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 149
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/150 (89%), Positives = 138/150 (92%), Gaps = 1/150 (0%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETKSR+DRKP GVGRGRGRGREDG GR KG+GRG DD
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGMGRGFDD 120
Query: 121 GGAKGAGGGRGRGGPGGKPGGSRGGGRSRG 150
GAK A GGRG+GGPGGKPG +R GGR RG
Sbjct: 121 -GAKAASGGRGKGGPGGKPGANRVGGRGRG 149
>gi|296089694|emb|CBI39513.3| unnamed protein product [Vitis vinifera]
Length = 162
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/122 (92%), Positives = 118/122 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 14 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 73
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETK+R+DRKPPGVGRGRGRGRE+GA GR KGIGRG+D+
Sbjct: 74 IRGNTIKYLRVPDEVIDKVQEETKNRADRKPPGVGRGRGRGREEGAGGRPAKGIGRGIDE 133
Query: 121 GG 122
G
Sbjct: 134 GA 135
>gi|449526219|ref|XP_004170111.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 149
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/150 (88%), Positives = 138/150 (92%), Gaps = 1/150 (0%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETKSR+DRKP GVGRGRGRGREDG GR KG+GRG DD
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGMGRGFDD 120
Query: 121 GGAKGAGGGRGRGGPGGKPGGSRGGGRSRG 150
GAK + GGRG+GGPGGKPG +R GGR RG
Sbjct: 121 -GAKASTGGRGKGGPGGKPGANRVGGRGRG 149
>gi|255564128|ref|XP_002523061.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus communis]
gi|223537623|gb|EEF39246.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus communis]
Length = 147
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 114/122 (93%), Positives = 114/122 (93%), Gaps = 2/122 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGR GR KGIGRGLDD
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGR--EDGGRPVKGIGRGLDD 118
Query: 121 GG 122
G
Sbjct: 119 GS 120
>gi|225450786|ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Vitis vinifera]
Length = 149
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/122 (92%), Positives = 118/122 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETK+R+DRKPPGVGRGRGRGRE+GA GR KGIGRG+D+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKNRADRKPPGVGRGRGRGREEGAGGRPAKGIGRGIDE 120
Query: 121 GG 122
G
Sbjct: 121 GA 122
>gi|255629165|gb|ACU14927.1| unknown [Glycine max]
Length = 148
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/120 (95%), Positives = 117/120 (97%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPPGVGRGRGRGRE+G GR TKGIGRGLDD
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREEGPGGRPTKGIGRGLDD 120
>gi|224064436|ref|XP_002301475.1| predicted protein [Populus trichocarpa]
gi|222843201|gb|EEE80748.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/123 (93%), Positives = 116/123 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEE KSRSDRKPPGVGRGRGRGREDG GR KGIGRGL+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEIKSRSDRKPPGVGRGRGRGREDGPGGRPAKGIGRGLED 120
Query: 121 GGA 123
A
Sbjct: 121 VAA 123
>gi|356500280|ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Glycine max]
Length = 149
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/120 (94%), Positives = 117/120 (97%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPPGVGRGRGRGR+DG GRQ KGIGRG+D+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGRDDGPGGRQPKGIGRGIDE 120
>gi|356572732|ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Glycine max]
Length = 148
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/120 (95%), Positives = 116/120 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPPGVGRGRGRGREDG GR KGIGRGLDD
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGREDGPGGRPAKGIGRGLDD 120
>gi|224131146|ref|XP_002321012.1| predicted protein [Populus trichocarpa]
gi|222861785|gb|EEE99327.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/120 (95%), Positives = 114/120 (95%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWR PECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRTPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDG GR KGIGRGL D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGPGGRPAKGIGRGLAD 120
>gi|414876860|tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea mays]
Length = 172
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/93 (97%), Positives = 92/93 (98%), Gaps = 1/93 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEET KSRSDRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93
>gi|226491554|ref|NP_001152235.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
gi|195654155|gb|ACG46545.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/93 (97%), Positives = 92/93 (98%), Gaps = 1/93 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEET KSRSDRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93
>gi|293335959|ref|NP_001170512.1| uncharacterized LOC100384520 [Zea mays]
gi|238005774|gb|ACR33922.1| unknown [Zea mays]
gi|413947013|gb|AFW79662.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
gi|414876859|tpg|DAA53990.1| TPA: U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/93 (97%), Positives = 92/93 (98%), Gaps = 1/93 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEET KSRSDRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93
>gi|242056887|ref|XP_002457589.1| hypothetical protein SORBIDRAFT_03g009890 [Sorghum bicolor]
gi|241929564|gb|EES02709.1| hypothetical protein SORBIDRAFT_03g009890 [Sorghum bicolor]
Length = 145
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/93 (97%), Positives = 92/93 (98%), Gaps = 1/93 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEET KSRSDRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93
>gi|326516310|dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521472|dbj|BAK00312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 143
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/93 (97%), Positives = 92/93 (98%), Gaps = 1/93 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEET KSRSDRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93
>gi|168013104|ref|XP_001759241.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689554|gb|EDQ75925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 181
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/90 (97%), Positives = 88/90 (97%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI
Sbjct: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKP 91
RGNTIKYLRVPDEVIDKVQEET RSDRKP
Sbjct: 62 RGNTIKYLRVPDEVIDKVQEETVKRSDRKP 91
>gi|297812937|ref|XP_002874352.1| hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata]
gi|297320189|gb|EFH50611.1| hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/92 (97%), Positives = 91/92 (98%), Gaps = 1/92 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEE KSR+DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEE-KSRTDRKPP 91
>gi|357129770|ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Brachypodium distachyon]
gi|326528247|dbj|BAJ93305.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 142
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/97 (97%), Positives = 96/97 (98%), Gaps = 1/97 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPPGVGR 96
IRGNTIKYLRVPDEVIDKVQEET KSRSDRKPPGVGR
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPGVGR 97
>gi|15241028|ref|NP_198124.1| U6 snRNA-associated Sm-like protein LSm4 [Arabidopsis thaliana]
gi|332006335|gb|AED93718.1| U6 snRNA-associated Sm-like protein LSm4 [Arabidopsis thaliana]
Length = 129
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/92 (96%), Positives = 91/92 (98%), Gaps = 1/92 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEE K+R+DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEE-KTRTDRKPP 91
>gi|21593495|gb|AAM65462.1| glycine rich protein-like [Arabidopsis thaliana]
Length = 129
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/92 (96%), Positives = 91/92 (98%), Gaps = 1/92 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEE K+R+DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEE-KTRTDRKPP 91
>gi|195655461|gb|ACG47198.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/93 (96%), Positives = 91/93 (97%), Gaps = 1/93 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPP 92
RGNTIKYLRVPDEVIDKVQEET KSRSDRKPP
Sbjct: 61 XRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93
>gi|223974607|gb|ACN31491.1| unknown [Zea mays]
Length = 146
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/93 (96%), Positives = 91/93 (97%), Gaps = 1/93 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVE KNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVEPKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEET KSRSDRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93
>gi|20260282|gb|AAM13039.1| unknown protein [Arabidopsis thaliana]
gi|22136528|gb|AAM91342.1| unknown protein [Arabidopsis thaliana]
Length = 129
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/92 (95%), Positives = 90/92 (97%), Gaps = 1/92 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSL KTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLFKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEE K+R+DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEE-KTRTDRKPP 91
>gi|218187914|gb|EEC70341.1| hypothetical protein OsI_01238 [Oryza sativa Indica Group]
Length = 147
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 100/120 (83%), Gaps = 17/120 (14%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDR---------------KPPGVGRGRGRGRED 104
IRGNTIKYLRVPDEVIDKVQEET KSRSDR PG GRG GRG++D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRSDRRPPGVGRGRGRGDIGAKPG-GRGIGRGQDD 119
>gi|294463283|gb|ADE77177.1| unknown [Picea sitchensis]
Length = 146
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/92 (94%), Positives = 88/92 (95%), Gaps = 2/92 (2%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
IRGNTIKYLRVPDEVIDKVQEE R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEE--KRIDRKPP 90
>gi|115435742|ref|NP_001042629.1| Os01g0256900 [Oryza sativa Japonica Group]
gi|12230291|sp|Q9LGE6.1|LSM4_ORYSJ RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|9711887|dbj|BAB07978.1| putative glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|108792648|dbj|BAE95809.1| putative glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|113532160|dbj|BAF04543.1| Os01g0256900 [Oryza sativa Japonica Group]
gi|215704752|dbj|BAG94780.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618133|gb|EEE54265.1| hypothetical protein OsJ_01157 [Oryza sativa Japonica Group]
Length = 147
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 100/120 (83%), Gaps = 17/120 (14%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDR---------------KPPGVGRGRGRGRED 104
IRGNTIKYLRVPDEVIDKVQEET KSRSDR PG GRG GRG++D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRSDRRPPGVGRGRGRGDIGTKPG-GRGIGRGQDD 119
>gi|302814278|ref|XP_002988823.1| hypothetical protein SELMODRAFT_128761 [Selaginella
moellendorffii]
gi|300143394|gb|EFJ10085.1| hypothetical protein SELMODRAFT_128761 [Selaginella
moellendorffii]
Length = 180
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/96 (91%), Positives = 90/96 (93%), Gaps = 4/96 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK---DGDRFWRMPE 58
LPLSLLKTA GHPMLVELKNGETYNGHLV+CD+WMNIHLREVICTSK DGDRFWRMPE
Sbjct: 2 LPLSLLKTAHGHPMLVELKNGETYNGHLVSCDSWMNIHLREVICTSKASDDGDRFWRMPE 61
Query: 59 CYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGV 94
CYIRGNTIKYLRVPDEVIDKVQEETK RSDRKPP V
Sbjct: 62 CYIRGNTIKYLRVPDEVIDKVQEETK-RSDRKPPSV 96
>gi|414876858|tpg|DAA53989.1| TPA: hypothetical protein ZEAMMB73_426325, partial [Zea mays]
Length = 112
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/88 (97%), Positives = 87/88 (98%), Gaps = 1/88 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRS 87
IRGNTIKYLRVPDEVIDKVQEET KSRS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETSKSRS 88
>gi|357619535|gb|EHJ72069.1| hypothetical protein KGM_17625 [Danaus plexippus]
Length = 138
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 107/144 (74%), Gaps = 14/144 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRG+TIKYLR+PDEVID V+EET+ +S RGRG G Q GR
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEETQVKS----------RGRGEISKGRGGQNMRSGR---- 106
Query: 121 GGAKGAGGGRGRGGPGGKPGGSRG 144
GG++GA G RGR P + GG+ G
Sbjct: 107 GGSRGAFGNRGRAAPLSRGGGNAG 130
>gi|195434128|ref|XP_002065055.1| GK14878 [Drosophila willistoni]
gi|194161140|gb|EDW76041.1| GK14878 [Drosophila willistoni]
Length = 303
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 84/87 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ +++S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDAQAKS 87
>gi|195146798|ref|XP_002014371.1| GL19160 [Drosophila persimilis]
gi|194106324|gb|EDW28367.1| GL19160 [Drosophila persimilis]
Length = 151
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 84/87 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ +S+S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDAQSKS 87
>gi|118790653|ref|XP_318746.3| AGAP009687-PA [Anopheles gambiae str. PEST]
gi|116118049|gb|EAA14138.4| AGAP009687-PA [Anopheles gambiae str. PEST]
Length = 157
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 84/87 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CDTWMNI+LREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ +S+S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDMQSKS 87
>gi|157109644|ref|XP_001650762.1| small nuclear ribonucleoprotein sm [Aedes aegypti]
gi|108878946|gb|EAT43171.1| AAEL005355-PA [Aedes aegypti]
Length = 154
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 84/87 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CDTWMNI+LREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ +++S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDVQAKS 87
>gi|25012547|gb|AAN71375.1| RE35747p [Drosophila melanogaster]
Length = 154
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 84/87 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ +++S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDAQAKS 87
>gi|78706862|ref|NP_001027236.1| CG17768, isoform A [Drosophila melanogaster]
gi|320544912|ref|NP_001188778.1| CG17768, isoform B [Drosophila melanogaster]
gi|45445082|gb|AAF52938.3| CG17768, isoform A [Drosophila melanogaster]
gi|201065957|gb|ACH92388.1| FI07244p [Drosophila melanogaster]
gi|318068412|gb|ADV37028.1| CG17768, isoform B [Drosophila melanogaster]
Length = 154
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 84/87 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ +++S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDAQAKS 87
>gi|195578187|ref|XP_002078947.1| GD22262 [Drosophila simulans]
gi|194190956|gb|EDX04532.1| GD22262 [Drosophila simulans]
Length = 154
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 84/87 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ +++S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDAQAKS 87
>gi|195051225|ref|XP_001993055.1| GH13613 [Drosophila grimshawi]
gi|193900114|gb|EDV98980.1| GH13613 [Drosophila grimshawi]
Length = 155
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 84/87 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ +++S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDAQAKS 87
>gi|348673931|gb|EGZ13750.1| hypothetical protein PHYSODRAFT_347058 [Phytophthora sojae]
Length = 153
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/89 (83%), Positives = 84/89 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQGHPMLVELKNG+TYNGHLVNCDTWMN++LREVICTSKDGDRFW+MPECYI
Sbjct: 4 LPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
RGNTIKY+RVP+E++D V EE S+ DR+
Sbjct: 64 RGNTIKYIRVPNEILDMVNEEDFSKRDRQ 92
>gi|357519603|ref|XP_003630090.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|355524112|gb|AET04566.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
Length = 161
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEV 75
IRGNTIKYLRVPDEV
Sbjct: 61 IRGNTIKYLRVPDEV 75
>gi|194859892|ref|XP_001969475.1| GG23936 [Drosophila erecta]
gi|190661342|gb|EDV58534.1| GG23936 [Drosophila erecta]
Length = 154
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 84/87 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ +++S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDAQAKS 87
>gi|384254045|gb|EIE27519.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169]
Length = 117
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 83/91 (91%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LLKTAQ HP+LVELKNGETYNGH+V CD+WMN+HLREVICTSKDGDRFWR+PE Y
Sbjct: 1 MLPLLLLKTAQKHPVLVELKNGETYNGHMVQCDSWMNVHLREVICTSKDGDRFWRIPETY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKP 91
IRGNTIKYLRVPDEVIDKV+EE R +++P
Sbjct: 61 IRGNTIKYLRVPDEVIDKVKEENYKRDEKRP 91
>gi|354473886|ref|XP_003499163.1| PREDICTED: hypothetical protein LOC100769464 [Cricetulus griseus]
Length = 391
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 79/83 (95%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 254 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 313
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
IRG+TIKYLR+PDE+ID V+EE
Sbjct: 314 IRGSTIKYLRIPDEIIDMVREEA 336
>gi|226372266|gb|ACO51758.1| U6 snRNA-associated Sm-like protein LSm4 [Rana catesbeiana]
Length = 140
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 86/99 (86%), Gaps = 8/99 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
IRG+TIKYLR+PDE+ID V+EE S+ GRGRG
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEVMSK--------GRGRG 91
>gi|147902804|ref|NP_001088454.1| LSM4 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|54311207|gb|AAH84779.1| LOC495318 protein [Xenopus laevis]
Length = 138
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 86/99 (86%), Gaps = 8/99 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
IRG+TIKYLR+PDE+ID V+EE S+ GRGRG
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEVMSK--------GRGRG 91
>gi|45361593|ref|NP_989371.1| LSM4 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|39849973|gb|AAH64199.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
gi|52078460|gb|AAH82491.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
Length = 138
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 86/99 (86%), Gaps = 8/99 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
IRG+TIKYLR+PDE+ID V+EE S+ GRGRG
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEVMSK--------GRGRG 91
>gi|449443839|ref|XP_004139683.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 88
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 76/78 (97%), Positives = 76/78 (97%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDK 78
IRGNTIKYLRVPDEV K
Sbjct: 61 IRGNTIKYLRVPDEVFMK 78
>gi|363808094|ref|NP_001242473.1| uncharacterized protein LOC100786834 [Glycine max]
gi|255645080|gb|ACU23039.1| unknown [Glycine max]
Length = 138
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 75/76 (98%), Positives = 76/76 (100%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE
Sbjct: 1 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 60
Query: 75 VIDKVQEETKSRSDRK 90
VIDKVQEETKSR+DRK
Sbjct: 61 VIDKVQEETKSRADRK 76
>gi|321456471|gb|EFX67578.1| hypothetical protein DAPPUDRAFT_218645 [Daphnia pulex]
Length = 135
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/101 (77%), Positives = 85/101 (84%), Gaps = 10/101 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSKDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
IRG+TIKYLR+PDEVID V+EE V +GRGR
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEEV----------VAKGRGRS 91
>gi|395848095|ref|XP_003796696.1| PREDICTED: uncharacterized protein LOC100963645 [Otolemur
garnettii]
Length = 312
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 85/100 (85%), Gaps = 10/100 (10%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 175 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 234
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+TIKYLR+PDE+ID V+EE V +GRGRG
Sbjct: 235 RGSTIKYLRIPDEIIDMVKEEV----------VAKGRGRG 264
>gi|41152340|ref|NP_956990.1| U6 snRNA-associated Sm-like protein LSm4 [Danio rerio]
gi|37589787|gb|AAH59435.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Danio rerio]
gi|38328316|gb|AAH62285.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Danio rerio]
Length = 143
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 86/101 (85%), Gaps = 10/101 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
IRG+TIKYLR+PDE+ID V+EE V +GRGRG
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEV----------VSKGRGRG 91
>gi|255076339|ref|XP_002501844.1| predicted protein [Micromonas sp. RCC299]
gi|226517108|gb|ACO63102.1| predicted protein [Micromonas sp. RCC299]
Length = 123
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 81/91 (89%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKT+QGHPMLVELKNGETYNGHLV+CDTWMN+HLREVICTSKDGDRFWRM CY
Sbjct: 1 MLPLSLLKTSQGHPMLVELKNGETYNGHLVSCDTWMNVHLREVICTSKDGDRFWRMANCY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKP 91
+RGNTIKY+ VPDEVI VQEE +S KP
Sbjct: 61 VRGNTIKYICVPDEVIGLVQEENLKKSQMKP 91
>gi|209733716|gb|ACI67727.1| U6 snRNA-associated Sm-like protein LSm4 [Salmo salar]
Length = 147
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 86/101 (85%), Gaps = 10/101 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
IRG+TIKYLR+PDE+ID V+EE V +GRGRG
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEV----------VSKGRGRG 91
>gi|332376551|gb|AEE63415.1| unknown [Dendroctonus ponderosae]
Length = 135
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 83/87 (95%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+EET +++
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEETVTKN 87
>gi|209735614|gb|ACI68676.1| U6 snRNA-associated Sm-like protein LSm4 [Salmo salar]
Length = 150
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 86/101 (85%), Gaps = 10/101 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
IRG+TIKYLR+PDE+ID V+EE V +GRGRG
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEV----------VSKGRGRG 91
>gi|348523129|ref|XP_003449076.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Oreochromis niloticus]
Length = 147
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 86/101 (85%), Gaps = 10/101 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
IRG+TIKYLR+PDE+ID V+EE V +GRGRG
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEV----------VSKGRGRG 91
>gi|432854576|ref|XP_004067969.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Oryzias
latipes]
Length = 144
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/147 (60%), Positives = 106/147 (72%), Gaps = 11/147 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRG+TIKYLR+PDE+ID V++E S+ GRGRG +++ G+ G GRG+
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKDEVVSK--------GRGRGGAQQNKQQGKGRGGAGRGVFG 112
Query: 121 G---GAKGAGGGRGRGGPGGKPGGSRG 144
G G G G+ P KP +G
Sbjct: 113 SRGRGMSGPGRGQQPQQPDKKPSKQQG 139
>gi|340718599|ref|XP_003397752.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like isoform 1
[Bombus terrestris]
Length = 154
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 83/87 (95%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD+WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 16 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECY 75
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ + +S
Sbjct: 76 IRGSTIKYLRIPDEVIDMVKEDVQMKS 102
>gi|13161882|emb|CAC33027.1| Lsm4 protein [Takifugu rubripes]
Length = 144
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 100/136 (73%), Gaps = 13/136 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRG+TIKYLR+PDE+ID V+E+ S+ GRGRG GA + +G GRG
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEDVLSK--------GRGRG-----GAQQNKQQGKGRGGAG 107
Query: 121 GGAKGAGGGRGRGGPG 136
GRG GPG
Sbjct: 108 RVGVFGSRGRGLTGPG 123
>gi|387016780|gb|AFJ50509.1| u6 snRNA-associated Sm-like protein LSm4-like [Crotalus
adamanteus]
Length = 139
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 81/86 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDE+ID V+EE S+
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEVVSK 86
>gi|328780963|ref|XP_624908.3| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like [Apis
mellifera]
Length = 138
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/138 (63%), Positives = 100/138 (72%), Gaps = 8/138 (5%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD+WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRG+TIKYLR+PDEVID V+E+ + +S RGRG + G S R
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDVQMKS--------RGRGEMKGRGQSQRGRGSGRGTFGR 112
Query: 121 GGAKGAGGGRGRGGPGGK 138
GG A GRG G G K
Sbjct: 113 GGRGPAALGRGGGNQGNK 130
>gi|350409693|ref|XP_003488818.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Bombus
impatiens]
gi|380028027|ref|XP_003697713.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Apis
florea]
Length = 139
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 83/87 (95%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD+WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ + +S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDVQMKS 87
>gi|38047763|gb|AAR09784.1| similar to Drosophila melanogaster CG17768, partial [Drosophila
yakuba]
Length = 152
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 82/85 (96%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
PLSLLKTAQ HPMLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECYIR
Sbjct: 1 PLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIR 60
Query: 63 GNTIKYLRVPDEVIDKVQEETKSRS 87
G+TIKYLR+PDEVID V+E+ +++S
Sbjct: 61 GSTIKYLRIPDEVIDMVKEDAQAKS 85
>gi|350535801|ref|NP_001232447.1| U6 snRNA-associated Sm-like protein LSm4 [Taeniopygia guttata]
gi|363743848|ref|XP_418245.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Gallus
gallus]
gi|197129949|gb|ACH46447.1| putative LSM4 homolog U6 small nuclear RNA associated
[Taeniopygia guttata]
Length = 138
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 81/86 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDE+ID V+EE S+
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEVVSK 86
>gi|405977571|gb|EKC42014.1| UPF0632 protein A [Crassostrea gigas]
Length = 697
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 71/86 (82%), Positives = 79/86 (91%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL+TA HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGDRFWRMPECYI
Sbjct: 8 LPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECYI 67
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRS 87
RG+TIKYLR+PDEVID V+EE +S
Sbjct: 68 RGSTIKYLRIPDEVIDMVKEEVIQKS 93
>gi|426230288|ref|XP_004009208.1| PREDICTED: uncharacterized protein LOC101110507, partial [Ovis
aries]
Length = 207
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 81/86 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 5 VLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 64
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDE+ID V+EE ++
Sbjct: 65 IRGSTIKYLRIPDEIIDMVKEEVVAK 90
>gi|390362890|ref|XP_003730251.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Strongylocentrotus purpuratus]
Length = 151
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 80/86 (93%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLL+TAQ HPMLVELKNGETYNGHLV CD WMNI+LREVICTS+DGDRFWRMPECY
Sbjct: 28 VLPLSLLRTAQNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGDRFWRMPECY 87
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDEVID V+EE S+
Sbjct: 88 IRGSTIKYLRIPDEVIDMVKEEVVSK 113
>gi|390335655|ref|XP_783129.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Strongylocentrotus purpuratus]
Length = 161
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 80/86 (93%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLL+TAQ HPMLVELKNGETYNGHLV CD WMNI+LREVICTS+DGDRFWRMPECY
Sbjct: 28 VLPLSLLRTAQNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGDRFWRMPECY 87
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDEVID V+EE S+
Sbjct: 88 IRGSTIKYLRIPDEVIDMVKEEVVSK 113
>gi|253735672|ref|NP_001156694.1| U6 snRNA-associated Sm-like protein [Acyrthosiphon pisum]
gi|239791415|dbj|BAH72178.1| ACYPI008634 [Acyrthosiphon pisum]
Length = 134
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 96/140 (68%), Gaps = 15/140 (10%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV CD+WMNI+LREVICTSKDGDRFWR+PECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVTCDSWMNINLREVICTSKDGDRFWRLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGL-- 118
IRG+ IKYLR+PDE+ D V+E+ + + RGR D R +G +G
Sbjct: 61 IRGSMIKYLRIPDEIFDMVKED-----------IVVNKARGRTDNQKNRAPRGARQGFSG 109
Query: 119 --DDGGAKGAGGGRGRGGPG 136
+G G + RGGP
Sbjct: 110 RGGGSNNRGTGPQQQRGGPN 129
>gi|10720074|sp|Q9QXA5.1|LSM4_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm4
gi|6692064|emb|CAB65729.1| Lsm4 protein [Mus musculus]
Length = 137
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 85/101 (84%), Gaps = 11/101 (10%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
IRG+TIKYLR+PDE+ID V+EE +GRGRG
Sbjct: 61 IRGSTIKYLRIPDEIIDMVREEA-----------AKGRGRG 90
>gi|47217413|emb|CAG00773.1| unnamed protein product [Tetraodon nigroviridis]
Length = 131
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 88/103 (85%), Gaps = 8/103 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
RG+TIKYLR+PDE+ID V+EE S+ GRGRG +++
Sbjct: 62 RGSTIKYLRIPDEIIDMVKEEVLSK--------GRGRGGAQQN 96
>gi|403303582|ref|XP_003942405.1| PREDICTED: uncharacterized protein LOC101034609 [Saimiri
boliviensis boliviensis]
Length = 285
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 148 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 207
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE ++
Sbjct: 208 RGSTIKYLRIPDEIIDMVKEEVVAK 232
>gi|301753917|ref|XP_002912773.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like
[Ailuropoda melanoleuca]
Length = 152
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 81/86 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDE+ID V+EE ++
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEVVAK 86
>gi|346469961|gb|AEO34825.1| hypothetical protein [Amblyomma maculatum]
Length = 142
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 10/101 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
IRG+TIKYLR+PDEVID V+EET + +GRGRG
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEET----------LVKGRGRG 91
>gi|355700149|gb|AES01356.1| LSM4-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 153
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 81/86 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 16 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 75
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDE+ID V+EE ++
Sbjct: 76 IRGSTIKYLRIPDEIIDMVKEEVVAK 101
>gi|348558677|ref|XP_003465143.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Cavia
porcellus]
Length = 139
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 81/86 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDE+ID V+EE ++
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEAVAK 86
>gi|383858764|ref|XP_003704869.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Megachile
rotundata]
Length = 158
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 88/101 (87%), Gaps = 6/101 (5%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL+TAQ HPMLVELKNGETYNGHLV+CD+WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 21 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECYI 80
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGR 102
RG+TIKYLR+PDEVID V+E+ + +S GRG +GR
Sbjct: 81 RGSTIKYLRIPDEVIDMVKEDIQMKSR------GRGEMKGR 115
>gi|427784849|gb|JAA57876.1| Putative small nuclear ribonucleoprotein snrnp [Rhipicephalus
pulchellus]
Length = 142
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 10/101 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
IRG+TIKYLR+PDEVID V+EET + +GRGRG
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEET----------LIKGRGRG 91
>gi|307107546|gb|EFN55788.1| hypothetical protein CHLNCDRAFT_22901 [Chlorella variabilis]
Length = 132
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 80/91 (87%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LLKTA HP+L+ELKNGETYNGH+V CDTWMNIHLREVICTSKDGDRFWRMPE Y
Sbjct: 1 MLPLVLLKTAAAHPVLIELKNGETYNGHMVQCDTWMNIHLREVICTSKDGDRFWRMPEAY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKP 91
IRGNTIKYLRVPDEV+DK +E R +++P
Sbjct: 61 IRGNTIKYLRVPDEVLDKAKEADFRRDEKRP 91
>gi|326934546|ref|XP_003213349.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like [Meleagris
gallopavo]
Length = 174
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 38 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 97
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE S+
Sbjct: 98 RGSTIKYLRIPDEIIDMVKEEVVSK 122
>gi|6912486|ref|NP_036453.1| U6 snRNA-associated Sm-like protein LSm4 isoform 1 [Homo sapiens]
gi|78369240|ref|NP_001030513.1| U6 snRNA-associated Sm-like protein LSm4 [Bos taurus]
gi|160837874|ref|NP_001104275.1| LSM4 homolog, U6 small nuclear RNA associated [Canis lupus
familiaris]
gi|386780610|ref|NP_001247502.1| U6 snRNA-associated Sm-like protein LSm4 [Macaca mulatta]
gi|296233291|ref|XP_002761949.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Callithrix
jacchus]
gi|297704123|ref|XP_002828970.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Pongo abelii]
gi|338718643|ref|XP_001500651.3| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like [Equus
caballus]
gi|397493881|ref|XP_003817824.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Pan paniscus]
gi|402904782|ref|XP_003915219.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Papio anubis]
gi|410950868|ref|XP_003982124.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Felis catus]
gi|426387786|ref|XP_004060343.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Gorilla gorilla gorilla]
gi|10720082|sp|Q9Y4Z0.1|LSM4_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm4; AltName:
Full=Glycine-rich protein; Short=GRP
gi|109892572|sp|Q3ZBK6.1|LSM4_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm4
gi|5919149|gb|AAD56228.1|AF182290_1 U6 snRNA-associated Sm-like protein LSm4 [Homo sapiens]
gi|6563244|gb|AAF17216.1|AF117235_1 glycine-rich protein [Homo sapiens]
gi|9623197|gb|AAF90055.1|AF251218_1 LSm4 autoantigen [Homo sapiens]
gi|5262858|emb|CAB45867.1| Lsm4 protein [Homo sapiens]
gi|12653237|gb|AAH00387.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|13177763|gb|AAH03652.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|18645159|gb|AAH22198.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|23273864|gb|AAH23665.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|73587230|gb|AAI03244.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|119605092|gb|EAW84686.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|190690627|gb|ACE87088.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
protein [synthetic construct]
gi|190691985|gb|ACE87767.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
protein [synthetic construct]
gi|208966682|dbj|BAG73355.1| LSM4 homolog, U6 small nuclear RNA associated [synthetic
construct]
gi|296486080|tpg|DAA28193.1| TPA: U6 snRNA-associated Sm-like protein LSm4 [Bos taurus]
gi|380784377|gb|AFE64064.1| U6 snRNA-associated Sm-like protein LSm4 isoform 1 [Macaca
mulatta]
gi|383408443|gb|AFH27435.1| U6 snRNA-associated Sm-like protein LSm4 [Macaca mulatta]
gi|410214894|gb|JAA04666.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410249724|gb|JAA12829.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410289766|gb|JAA23483.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410328789|gb|JAA33341.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
Length = 139
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 81/86 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDE+ID V+EE ++
Sbjct: 61 IRGSTIKYLRIPDEIIDMVKEEVVAK 86
>gi|307178481|gb|EFN67170.1| U6 snRNA-associated Sm-like protein LSm4 [Camponotus floridanus]
Length = 139
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 82/87 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ + +S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDIQMKS 87
>gi|119605093|gb|EAW84687.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 163
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 26 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 85
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE ++
Sbjct: 86 RGSTIKYLRIPDEIIDMVKEEVVAK 110
>gi|410921860|ref|XP_003974401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Takifugu
rubripes]
Length = 147
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/103 (72%), Positives = 88/103 (85%), Gaps = 8/103 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 6 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
RG+TIKYLR+PDE+ID V+E+ S+ GRGRG +++
Sbjct: 66 RGSTIKYLRIPDEIIDMVKEDVLSK--------GRGRGGAQQN 100
>gi|303279759|ref|XP_003059172.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459008|gb|EEH56304.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 129
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 81/91 (89%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLV+CDTWMN+HL+EVICTSKDGDRFWRM CY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVSCDTWMNVHLKEVICTSKDGDRFWRMANCY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKP 91
+RGNTIKY+ VPDEVI V+EE + D +P
Sbjct: 61 VRGNTIKYVCVPDEVIGLVEEENLRKKDSRP 91
>gi|395513176|ref|XP_003760805.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Sarcophilus
harrisii]
Length = 152
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 15 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 74
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE S+
Sbjct: 75 RGSTIKYLRIPDEIIDMVKEEVVSK 99
>gi|449279546|gb|EMC87118.1| U6 snRNA-associated Sm-like protein LSm4, partial [Columba livia]
Length = 138
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE S+
Sbjct: 62 RGSTIKYLRIPDEIIDMVKEEVVSK 86
>gi|242247021|ref|NP_001156271.1| U6 snRNA-associated Sm-like protein [Acyrthosiphon pisum]
gi|239790147|dbj|BAH71652.1| ACYPI008634 [Acyrthosiphon pisum]
Length = 134
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 86/113 (76%), Gaps = 11/113 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV CD+WMNI+LREVICTSKDGDRFWR+PECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVTCDSWMNINLREVICTSKDGDRFWRLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKG 113
IRG+ IKYLR+PDE+ D V+E+ + + RGR D R +G
Sbjct: 61 IRGSMIKYLRIPDEIFDMVKED-----------IVVNKARGRTDNQKNRAPRG 102
>gi|345488677|ref|XP_003425963.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Nasonia
vitripennis]
Length = 138
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 82/87 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG+TIKYLR+PDEVID V+E+ + +S
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDVQMKS 87
>gi|157823641|ref|NP_001099543.1| U6 snRNA-associated Sm-like protein LSm4 [Rattus norvegicus]
gi|159032056|ref|NP_056631.2| U6 snRNA-associated Sm-like protein LSm4 [Mus musculus]
gi|12846677|dbj|BAB27261.1| unnamed protein product [Mus musculus]
gi|20073103|gb|AAH26747.1| Lsm4 protein [Mus musculus]
gi|26354156|dbj|BAC40708.1| unnamed protein product [Mus musculus]
gi|74198684|dbj|BAE39816.1| unnamed protein product [Mus musculus]
gi|74228648|dbj|BAE25390.1| unnamed protein product [Mus musculus]
gi|148696910|gb|EDL28857.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Mus musculus]
gi|149036057|gb|EDL90723.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 138
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 79/83 (95%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
IRG+TIKYLR+PDE+ID V+EE
Sbjct: 61 IRGSTIKYLRIPDEIIDMVREEA 83
>gi|449457365|ref|XP_004146419.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 138
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/150 (78%), Positives = 123/150 (82%), Gaps = 12/150 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWR+
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRV---- 56
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
N I L VIDKVQEETKSR+DRKP GVGRGRGRGREDG GR KG+GRG DD
Sbjct: 57 --SNIISSL-----VIDKVQEETKSRADRKPLGVGRGRGRGREDGPGGRPAKGMGRGFDD 109
Query: 121 GGAKGAGGGRGRGGPGGKPGGSRGGGRSRG 150
GAK A GGRG+GGPGGKPG +R GGR RG
Sbjct: 110 -GAKAASGGRGKGGPGGKPGANRVGGRGRG 138
>gi|198436639|ref|XP_002128141.1| PREDICTED: similar to GL19160 isoform 1 [Ciona intestinalis]
Length = 127
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTA HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD FWRMPECY
Sbjct: 1 MLPLSLLKTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDHFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRG+TIKYLR+PDEVID V+E++ S+
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDSMSK 86
>gi|351701223|gb|EHB04142.1| U6 snRNA-associated Sm-like protein LSm4, partial [Heterocephalus
glaber]
Length = 117
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE ++
Sbjct: 62 RGSTIKYLRIPDEIIDMVKEEVVAK 86
>gi|417408054|gb|JAA50600.1| Putative small nuclear ribonucleoprotein snrnp, partial [Desmodus
rotundus]
Length = 142
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 5 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE ++
Sbjct: 65 RGSTIKYLRIPDEIIDMVKEEVVAK 89
>gi|355703322|gb|EHH29813.1| Glycine-rich protein, partial [Macaca mulatta]
gi|440903986|gb|ELR54561.1| U6 snRNA-associated Sm-like protein LSm4, partial [Bos grunniens
mutus]
Length = 139
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE ++
Sbjct: 62 RGSTIKYLRIPDEIIDMVKEEVVAK 86
>gi|355755618|gb|EHH59365.1| hypothetical protein EGM_09452, partial [Macaca fascicularis]
Length = 138
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 1 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 60
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE ++
Sbjct: 61 RGSTIKYLRIPDEIIDMVKEEVVAK 85
>gi|12834762|dbj|BAB23033.1| unnamed protein product [Mus musculus]
Length = 138
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 78/83 (93%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS DGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSLDGDKFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
IRG+TIKYLR+PDE+ID V+EE
Sbjct: 61 IRGSTIKYLRIPDEIIDMVREEA 83
>gi|91084013|ref|XP_975325.1| PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA associated
[Tribolium castaneum]
Length = 163
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 96/139 (69%), Gaps = 20/139 (14%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 14 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 73
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+TIKYLR+PDEVID V+EE V + RGR + G G+ +
Sbjct: 74 RGSTIKYLRIPDEVIDMVKEE----------AVVKNRGRDMKGGRGGQNQRN-------- 115
Query: 122 GAKGAGGGRGRGGPGGKPG 140
+ A G RG P PG
Sbjct: 116 --RPAARGSYRGEPDPGPG 132
>gi|332019235|gb|EGI59745.1| U6 snRNA-associated Sm-like protein LSm4 [Acromyrmex echinatior]
Length = 138
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 81/86 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL+LLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 1 LPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 60
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRS 87
RG+TIKYLR+PDEVID V+E+ + +S
Sbjct: 61 RGSTIKYLRIPDEVIDMVKEDIQMKS 86
>gi|344283091|ref|XP_003413306.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Loxodonta africana]
Length = 151
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 80/85 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 14 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 73
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V++E ++
Sbjct: 74 RGSTIKYLRIPDEIIDMVKDEVVAK 98
>gi|427778567|gb|JAA54735.1| Putative small nuclear ribonucleoprotein snrnp [Rhipicephalus
pulchellus]
Length = 167
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 85/99 (85%), Gaps = 10/99 (10%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
PLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIR
Sbjct: 28 PLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIR 87
Query: 63 GNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
G+TIKYLR+PDEVID V+EET + +GRGRG
Sbjct: 88 GSTIKYLRIPDEVIDMVKEET----------LIKGRGRG 116
>gi|148696909|gb|EDL28856.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Mus musculus]
Length = 143
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/82 (85%), Positives = 78/82 (95%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 7 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEET 83
RG+TIKYLR+PDE+ID V+EE
Sbjct: 67 RGSTIKYLRIPDEIIDMVREEA 88
>gi|270007999|gb|EFA04447.1| hypothetical protein TcasGA2_TC014750 [Tribolium castaneum]
Length = 130
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/82 (85%), Positives = 78/82 (95%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 14 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 73
Query: 62 RGNTIKYLRVPDEVIDKVQEET 83
RG+TIKYLR+PDEVID V+EE
Sbjct: 74 RGSTIKYLRIPDEVIDMVKEEA 95
>gi|149571864|ref|XP_001512156.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like, partial
[Ornithorhynchus anatinus]
Length = 138
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 79/85 (92%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HP LVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI
Sbjct: 1 LPLSLLKTAQNHPYLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 60
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+TIKYLR+PDE+ID V+EE S+
Sbjct: 61 RGSTIKYLRIPDEIIDMVKEEVVSK 85
>gi|307195781|gb|EFN77595.1| U6 snRNA-associated Sm-like protein LSm4 [Harpegnathos saltator]
Length = 138
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 81/86 (94%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMN++LREVICTS+DGD+FWRMPECYI
Sbjct: 1 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNVNLREVICTSRDGDKFWRMPECYI 60
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRS 87
RG+TIKYLR+PDEVID V+E+ + +S
Sbjct: 61 RGSTIKYLRIPDEVIDMVKEDVQMKS 86
>gi|313241313|emb|CBY33589.1| unnamed protein product [Oikopleura dioica]
Length = 141
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 77/86 (89%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTA HPMLVELKNGETYNGHLVNCD WMN+ LREVICTS+DGD FWRM ECY
Sbjct: 1 MLPLSLLKTAVNHPMLVELKNGETYNGHLVNCDNWMNLQLREVICTSRDGDHFWRMNECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RG+TIKYLR+PDEVID V+EE +R
Sbjct: 61 VRGSTIKYLRIPDEVIDMVKEENTAR 86
>gi|313236950|emb|CBY12197.1| unnamed protein product [Oikopleura dioica]
Length = 141
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 77/86 (89%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTA HPMLVELKNGETYNGHLVNCD WMN+ LREVICTS+DGD FWRM ECY
Sbjct: 1 MLPLSLLKTAVNHPMLVELKNGETYNGHLVNCDNWMNLQLREVICTSRDGDHFWRMNECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RG+TIKYLR+PDEVID V+EE +R
Sbjct: 61 VRGSTIKYLRIPDEVIDMVKEENTAR 86
>gi|156395605|ref|XP_001637201.1| predicted protein [Nematostella vectensis]
gi|156224311|gb|EDO45138.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 81/86 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLL+TAQ HPMLVELKNGETYNGHLV+CDTWMNI+LREVICTS+DGD+FW++PECY
Sbjct: 2 VLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSRDGDKFWKIPECY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RG+ IKYLR+PDEVID V+EE K +
Sbjct: 62 VRGSNIKYLRIPDEVIDMVKEEVKQQ 87
>gi|260793240|ref|XP_002591620.1| hypothetical protein BRAFLDRAFT_281075 [Branchiostoma floridae]
gi|229276829|gb|EEN47631.1| hypothetical protein BRAFLDRAFT_281075 [Branchiostoma floridae]
Length = 126
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 79/90 (87%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHL CD WMNI LR+VICTS+DGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLEACDNWMNIKLRDVICTSRDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
IRG+TIKYLR+PDEVID V+E+ S+ K
Sbjct: 61 IRGSTIKYLRIPDEVIDMVKEDIVSKQRTK 90
>gi|308804932|ref|XP_003079778.1| glycine rich protein-common tobacco sp|Q43582|LSM4_TOBAC Probable
U6 snRNA-associated Sm-lik (ISS) [Ostreococcus tauri]
gi|116058235|emb|CAL53424.1| glycine rich protein-common tobacco sp|Q43582|LSM4_TOBAC Probable
U6 snRNA-associated Sm-lik (ISS) [Ostreococcus tauri]
Length = 779
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 70/90 (77%), Positives = 81/90 (90%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LLKT+ G PMLVELKNGETYNG L +CDTWMN+HL+EVICTSKDGDRFWRM ECY
Sbjct: 659 MLPLTLLKTSCGRPMLVELKNGETYNGTLASCDTWMNVHLKEVICTSKDGDRFWRMEECY 718
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
+RGNTIKY+ VPDEV+DKV+EE K+R R+
Sbjct: 719 VRGNTIKYVCVPDEVLDKVREEMKNRPQRE 748
>gi|301108303|ref|XP_002903233.1| U6 snRNA-associated Sm-like protein [Phytophthora infestans
T30-4]
gi|262097605|gb|EEY55657.1| U6 snRNA-associated Sm-like protein [Phytophthora infestans
T30-4]
Length = 82
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/75 (92%), Positives = 75/75 (100%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNG+TYNGHLVNCDTWMN++LREVICTSKDGDRFW+MPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECY 60
Query: 61 IRGNTIKYLRVPDEV 75
IRGNTIKY+RVP+EV
Sbjct: 61 IRGNTIKYIRVPNEV 75
>gi|301108373|ref|XP_002903268.1| U6 snRNA-associated Sm-like protein LSm4, putative [Phytophthora
infestans T30-4]
gi|262097640|gb|EEY55692.1| U6 snRNA-associated Sm-like protein LSm4, putative [Phytophthora
infestans T30-4]
Length = 79
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 69/75 (92%), Positives = 75/75 (100%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQGHPMLVELKNG+TYNGHLVNCDTWMN++LREVICTSKDGDRFW+MPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECY 60
Query: 61 IRGNTIKYLRVPDEV 75
IRGNTIKY+RVP+EV
Sbjct: 61 IRGNTIKYIRVPNEV 75
>gi|145347482|ref|XP_001418193.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578422|gb|ABO96486.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 115
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 79/86 (91%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LLKT+ GHPMLVELKNGETYNG L +CDTWMN+HL+EVICTSKDGDRFWRM ECY
Sbjct: 1 MLPLTLLKTSCGHPMLVELKNGETYNGTLASCDTWMNVHLKEVICTSKDGDRFWRMAECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RGNTIKY+ VPDEV+D V+EE K+R
Sbjct: 61 VRGNTIKYVCVPDEVLDVVKEEMKNR 86
>gi|443711054|gb|ELU05001.1| hypothetical protein CAPTEDRAFT_200433 [Capitella teleta]
Length = 136
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/86 (77%), Positives = 79/86 (91%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TA HPMLVELKNGETYNGHLV+CD WMNI++REVICTS+DGDRFWRMPECY
Sbjct: 1 MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINMREVICTSRDGDRFWRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RG+TIKYLR+PDE+ID V+E+ +
Sbjct: 61 VRGSTIKYLRIPDEIIDMVKEDNMMK 86
>gi|449672414|ref|XP_002167952.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Hydra
magnipapillata]
Length = 128
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/94 (73%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL+LL+T+Q HPMLVELKNGETYNGHLV CD WMNI+LREVICTS+DGDRFWRM +CY
Sbjct: 2 VLPLTLLQTSQNHPMLVELKNGETYNGHLVTCDNWMNINLREVICTSRDGDRFWRMSQCY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGV 94
IRG+TIKYLR+PDEVID V+E+ + R+ +K V
Sbjct: 62 IRGSTIKYLRIPDEVIDMVKEDIQ-RNKQKSQAV 94
>gi|340376985|ref|XP_003387011.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like
[Amphimedon queenslandica]
Length = 125
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 76/82 (92%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLK AQ +PMLVELKNGETYNGHLV+CD WMNI L+EVICTS+DGDRFW+MPEC+I
Sbjct: 4 LPLSLLKAAQDNPMLVELKNGETYNGHLVSCDNWMNIQLKEVICTSRDGDRFWKMPECFI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEET 83
RG+ IKYLR+PDEVIDKV+EE
Sbjct: 64 RGSMIKYLRIPDEVIDKVKEEA 85
>gi|302762304|ref|XP_002964574.1| hypothetical protein SELMODRAFT_81834 [Selaginella
moellendorffii]
gi|300168303|gb|EFJ34907.1| hypothetical protein SELMODRAFT_81834 [Selaginella
moellendorffii]
Length = 90
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/79 (91%), Positives = 74/79 (93%), Gaps = 3/79 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK---DGDRFWRMPE 58
LPLSLLKTA GHPMLVELKNGETYNGHLV+CD+WMNIHLREVICTSK DGDRFWRMPE
Sbjct: 2 LPLSLLKTAHGHPMLVELKNGETYNGHLVSCDSWMNIHLREVICTSKASDDGDRFWRMPE 61
Query: 59 CYIRGNTIKYLRVPDEVID 77
CYIRGNTIKYLRVPDEV D
Sbjct: 62 CYIRGNTIKYLRVPDEVSD 80
>gi|391338956|ref|XP_003743819.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Metaseiulus occidentalis]
Length = 116
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 80/85 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS++GD+FWR+PECY
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSREGDKFWRIPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKS 85
+RGNTI++LR+PDEVI+ V+E+ +
Sbjct: 61 VRGNTIRFLRIPDEVIEMVKEDINN 85
>gi|391339536|ref|XP_003744104.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Metaseiulus occidentalis]
Length = 116
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 80/85 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS++GD+FWR+PECY
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSREGDKFWRIPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKS 85
IRGNTI++LR+PDEVI+ V+++ +
Sbjct: 61 IRGNTIRFLRIPDEVIEMVKDDMHN 85
>gi|357442545|ref|XP_003591550.1| Small nuclear ribonucleoprotein sm [Medicago truncatula]
gi|355480598|gb|AES61801.1| Small nuclear ribonucleoprotein sm [Medicago truncatula]
Length = 106
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/102 (72%), Positives = 77/102 (75%), Gaps = 19/102 (18%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREV CTS DGDRFW MP+CY
Sbjct: 1 MFPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVFCTSNDGDRFWYMPKCY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGR 102
IRGNTIKYLR+ PP +GRGR RGR
Sbjct: 61 IRGNTIKYLRL-------------------PPSLGRGRARGR 83
>gi|195995525|ref|XP_002107631.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588407|gb|EDV28429.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 96
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/75 (89%), Positives = 72/75 (96%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ HPMLVELKNGETYNGHLVNCD +MNI+LREVICTSKDGDRFW+MPECY
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVNCDNFMNINLREVICTSKDGDRFWKMPECY 60
Query: 61 IRGNTIKYLRVPDEV 75
+RGN IKYLR+PDEV
Sbjct: 61 LRGNMIKYLRIPDEV 75
>gi|159476634|ref|XP_001696416.1| U6 snRNA-associated Sm-like protein LSm4 [Chlamydomonas
reinhardtii]
gi|158282641|gb|EDP08393.1| U6 snRNA-associated Sm-like protein LSm4 [Chlamydomonas
reinhardtii]
Length = 134
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 80/91 (87%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ H +LVELKNGETYNG+L +CDTWMN+HL EVICTSKDG RF++MPE Y
Sbjct: 1 MLPLSLLKTAQRHGVLVELKNGETYNGYLQHCDTWMNLHLSEVICTSKDGQRFFKMPEAY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKP 91
IRGNTIKY+ VP+EV+DKVQEE R +++P
Sbjct: 61 IRGNTIKYISVPEEVVDKVQEENLRRDEKRP 91
>gi|47028321|gb|AAT09093.1| U6 snRNA-associated Sm like protein [Bigelowiella natans]
Length = 119
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 81/89 (91%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TA GHPMLVEL+NGETYNGHLV+CD WMN+ +R VICTS+DG+RFW+M ECY
Sbjct: 1 MLPLSLLRTAVGHPMLVELRNGETYNGHLVSCDNWMNLLIRGVICTSRDGERFWQMDECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDR 89
I+GNTIKYLR+PDEV++KV+EET S ++
Sbjct: 61 IKGNTIKYLRIPDEVLEKVKEETFSYQNK 89
>gi|256083180|ref|XP_002577827.1| U6 snrna-associated sm-like protein lsm4 [Schistosoma mansoni]
gi|360044788|emb|CCD82336.1| U6 snrna-associated sm-like protein lsm4 [Schistosoma mansoni]
Length = 142
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 86/110 (78%), Gaps = 8/110 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLP++LLK A PMLVELK+GETYNGHLV CD WMNIHL+EVICTS+DGDRFW+MPECY
Sbjct: 1 MLPVTLLKAATNLPMLVELKSGETYNGHLVACDDWMNIHLKEVICTSRDGDRFWKMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE---TKSRSDRKPPGVGRG-----RGRGR 102
IRG+ IKYLR+PD+VIDKV+E+ K R+ + GRG + RGR
Sbjct: 61 IRGSIIKYLRIPDDVIDKVKEDLQLAKMRNRSQSADTGRGGFHRNKARGR 110
>gi|324507721|gb|ADY43268.1| U6 snRNA-associated Sm-like protein LSm4 [Ascaris suum]
Length = 130
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 77/84 (91%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNIHLR+ ICTS+DGDRF +MPE Y
Sbjct: 2 VLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDAWMNIHLRDAICTSRDGDRFLKMPEVY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
+RG+TIKYLR+PD+V++ V++E K
Sbjct: 62 VRGSTIKYLRIPDDVVELVKDEVK 85
>gi|302831786|ref|XP_002947458.1| hypothetical protein VOLCADRAFT_79613 [Volvox carteri f.
nagariensis]
gi|300267322|gb|EFJ51506.1| hypothetical protein VOLCADRAFT_79613 [Volvox carteri f.
nagariensis]
Length = 140
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 78/91 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQ H +LVELKNGETYNG+L CDTWMN+HL EVICTSKDG RF++MPE Y
Sbjct: 1 MLPLSLLKTAQRHAVLVELKNGETYNGYLQQCDTWMNLHLSEVICTSKDGQRFFKMPEAY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKP 91
IRGNTIKY+ VP+EVI KVQEE R +++P
Sbjct: 61 IRGNTIKYISVPEEVIGKVQEENLKRDEKRP 91
>gi|340383285|ref|XP_003390148.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like, partial
[Amphimedon queenslandica]
Length = 93
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 75/82 (91%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLK AQ +PMLVELKNGETYNGHLV+CD WMNI L+EVICTS+DG+RFW+MPEC+I
Sbjct: 4 LPLSLLKAAQDNPMLVELKNGETYNGHLVSCDNWMNIQLKEVICTSRDGERFWKMPECFI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEET 83
RG+ KYLR+PDEVIDKV+EE
Sbjct: 64 RGSMTKYLRIPDEVIDKVKEEA 85
>gi|323452593|gb|EGB08466.1| hypothetical protein AURANDRAFT_25994 [Aureococcus
anophagefferens]
Length = 139
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 77/88 (87%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL TA+G PML+ELKNG+TYNG LV+ DTWMN++L EVICTS+DGDRFW++ ECY
Sbjct: 1 MLPLSLLTTAKGQPMLIELKNGDTYNGRLVSADTWMNVNLEEVICTSRDGDRFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSD 88
IRGN+IKYLR+PDE+ID VQEE S D
Sbjct: 61 IRGNSIKYLRIPDEIIDLVQEEEISAKD 88
>gi|340718601|ref|XP_003397753.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like isoform 2
[Bombus terrestris]
Length = 148
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 82/102 (80%), Gaps = 14/102 (13%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD+WMNI+LRE DGD+FWRMPECY
Sbjct: 16 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLRE------DGDKFWRMPECY 69
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGR 102
IRG+TIKYLR+PDEVID V+E+ + +S RGRG +
Sbjct: 70 IRGSTIKYLRIPDEVIDMVKEDVQMKS--------RGRGEMK 103
>gi|324523014|gb|ADY48174.1| U6 snRNA-associated Sm-like protein LSm4 [Ascaris suum]
Length = 166
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 77/84 (91%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLL+TAQ HPMLVELKNGETYNGHLV+CD WMNIHLR+ ICTS+DGDRF +MPE Y
Sbjct: 38 VLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDAWMNIHLRDAICTSRDGDRFLKMPEVY 97
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
+RG+TIKYLR+PD+V++ V++E K
Sbjct: 98 VRGSTIKYLRIPDDVVELVKDEVK 121
>gi|170578381|ref|XP_001894384.1| Probable U6 snRNA-associated Sm-like protein LSm4 [Brugia malayi]
gi|158599053|gb|EDP36777.1| Probable U6 snRNA-associated Sm-like protein LSm4, putative [Brugia
malayi]
Length = 163
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 74/83 (89%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL+TAQ HPMLVELKNGETYNGHLV CD WMNIHLR+ ICTS+DGDRF +M E Y+
Sbjct: 34 LPLSLLRTAQNHPMLVELKNGETYNGHLVACDAWMNIHLRDAICTSRDGDRFLKMQEVYV 93
Query: 62 RGNTIKYLRVPDEVIDKVQEETK 84
RG+TIKYLR+PD+V++ V+EE K
Sbjct: 94 RGSTIKYLRIPDDVVELVKEEVK 116
>gi|384489888|gb|EIE81110.1| hypothetical protein RO3G_05815 [Rhizopus delemar RA 99-880]
Length = 129
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 74/82 (90%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL TA GHPMLVELK+GET+NGHLVNCD WMN+ LREVI TS +GD+FWR+PECY
Sbjct: 1 MLPLSLLHTAAGHPMLVELKSGETFNGHLVNCDNWMNLTLREVIQTSPEGDKFWRLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRGNTIKYL VP+E++D V+EE
Sbjct: 61 IRGNTIKYLNVPEEIVDMVKEE 82
>gi|66807347|ref|XP_637396.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74853183|sp|Q54KX4.1|LSM4_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|60465817|gb|EAL63891.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 177
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 89/133 (66%), Gaps = 13/133 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+T QGH ++VELKNGETYNG LVNCD WMNI+L+ VI TSKD D+FW++ CY
Sbjct: 1 MLPLSLLRTGQGHQIMVELKNGETYNGLLVNCDNWMNINLKNVIRTSKDSDKFWKIQSCY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRGNTIKY+ VPDE+ID V EE ++ RGRGR DG +GR
Sbjct: 61 IRGNTIKYISVPDEIIDLVAEEEQTLRTTYQQRNDSNRGRGRGDGFAGR----------- 109
Query: 121 GGAKGAGGGRGRG 133
+G GRGRG
Sbjct: 110 --GRGDASGRGRG 120
>gi|402581860|gb|EJW75807.1| small nuclear ribonucleoprotein, partial [Wuchereria bancrofti]
Length = 123
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 74/84 (88%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PLSLL+TAQ HPMLVELKNGETYNGHLV CD WMNIHLR+ ICTS+DGDRF +M E Y+
Sbjct: 1 MPLSLLRTAQNHPMLVELKNGETYNGHLVACDAWMNIHLRDAICTSRDGDRFLKMQEVYV 60
Query: 62 RGNTIKYLRVPDEVIDKVQEETKS 85
RG+TIKYLR+PD+V++ V+EE K
Sbjct: 61 RGSTIKYLRIPDDVVELVKEEVKE 84
>gi|393905582|gb|EFO18954.2| hypothetical protein LOAG_09541 [Loa loa]
Length = 135
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 75/85 (88%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLL+TAQ HPMLVELK+GETYNGHLV CD WMNIHLR+ ICTS+DGDRF +M E Y
Sbjct: 2 VLPLSLLRTAQNHPMLVELKSGETYNGHLVACDAWMNIHLRDAICTSRDGDRFLKMQEVY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKS 85
+RG+TIKYLR+PD+V++ V+EE K
Sbjct: 62 VRGSTIKYLRIPDDVVELVKEEVKE 86
>gi|339249295|ref|XP_003373635.1| putative LSM domain protein [Trichinella spiralis]
gi|316970184|gb|EFV54162.1| putative LSM domain protein [Trichinella spiralis]
Length = 307
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 75/84 (89%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ PL+LL+TAQ HPML+ELKNGETYNGHL CD WMN+HLR+VICTSK+GDRFWR+PE +
Sbjct: 2 VFPLTLLRTAQNHPMLIELKNGETYNGHLEACDCWMNVHLRDVICTSKEGDRFWRIPEAF 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
IRG +IKYLR+P+EV+D V++E K
Sbjct: 62 IRGCSIKYLRIPEEVMDCVRDEIK 85
>gi|194761808|ref|XP_001963115.1| GF14101 [Drosophila ananassae]
gi|190616812|gb|EDV32336.1| GF14101 [Drosophila ananassae]
Length = 140
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 7/125 (5%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECYIRG+TIKYLR+PDE
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIKYLRIPDE 60
Query: 75 VIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDGGAKGAGGGRGRGG 134
VID V+E+ +++S R + + RG G S + +G GR + G G+G GG
Sbjct: 61 VIDMVKEDAQAKS-RNRTEMNKNRG-----GNSSQNQRG-GRPGGNRNNVGNRSGQGYGG 113
Query: 135 PGGKP 139
PG P
Sbjct: 114 PGNNP 118
>gi|296415636|ref|XP_002837492.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633364|emb|CAZ81683.1| unnamed protein product [Tuber melanosporum]
Length = 249
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 62/80 (77%), Positives = 72/80 (90%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL TAQGHPMLVELKNGET NGHLVNCDTWMN+ L+EV+ TS +GD+F+R+ ECY+
Sbjct: 117 LPLSLLNTAQGHPMLVELKNGETLNGHLVNCDTWMNLTLKEVVQTSPEGDKFFRLAECYV 176
Query: 62 RGNTIKYLRVPDEVIDKVQE 81
RGN IKYLRVPDE+ID V+E
Sbjct: 177 RGNNIKYLRVPDEIIDLVKE 196
>gi|198470479|ref|XP_002133476.1| GA22792 [Drosophila pseudoobscura pseudoobscura]
gi|198145470|gb|EDY72104.1| GA22792 [Drosophila pseudoobscura pseudoobscura]
Length = 137
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 71/73 (97%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECYIRG+TIKYLR+PDE
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIKYLRIPDE 60
Query: 75 VIDKVQEETKSRS 87
VID V+E+ +S+S
Sbjct: 61 VIDMVKEDAQSKS 73
>gi|330798959|ref|XP_003287516.1| hypothetical protein DICPUDRAFT_47407 [Dictyostelium purpureum]
gi|325082462|gb|EGC35943.1| hypothetical protein DICPUDRAFT_47407 [Dictyostelium purpureum]
Length = 168
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 82/105 (78%), Gaps = 4/105 (3%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+T QGH ++VELKNGETYNG+L+NCD WMNI+LR VI TSKD D+FW++ CY
Sbjct: 1 MLPLSLLRTGQGHQIMVELKNGETYNGYLINCDNWMNINLRNVIRTSKDSDKFWKIQSCY 60
Query: 61 IRGNTIKYLRVPDEVID-KVQEETKSRSDRKPPG---VGRGRGRG 101
IRGNTIKY+ VPDE+ID V+EE SR G GRGRGRG
Sbjct: 61 IRGNTIKYISVPDEIIDLVVEEEQISRPHNLSKGDNTTGRGRGRG 105
>gi|167516422|ref|XP_001742552.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779176|gb|EDQ92790.1| predicted protein [Monosiga brevicollis MX1]
Length = 115
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 74/89 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+ A H MLVELKNGETYNGHL CD +MNI +R+V TSKDGDRFW+MPECY
Sbjct: 1 MLPLSLLRAASNHMMLVELKNGETYNGHLSKCDNYMNITMRDVTLTSKDGDRFWKMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDR 89
IRGN IK+LR+PDEVID+V EE +S +R
Sbjct: 61 IRGNNIKFLRIPDEVIDQVVEEERSNKNR 89
>gi|340960256|gb|EGS21437.1| hypothetical protein CTHT_0032950 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 769
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 69/120 (57%), Positives = 86/120 (71%), Gaps = 9/120 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ LREV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLREVVQTSPEGDKFMRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
++GN IKYLRVPDE+ID V+E+ + + RG G E+ A R+ G+ RG+ +
Sbjct: 61 VKGNNIKYLRVPDEIIDIVKEQQQQQH--------RGAVVGEEEVAL-REVDGVARGVHE 111
>gi|328774253|gb|EGF84290.1| hypothetical protein BATDEDRAFT_85018 [Batrachochytrium
dendrobatidis JAM81]
Length = 132
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 75/82 (91%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQGHPML+ELKNG+T+NGHLVNCD +MN++LREVI TS DG++FW++PE Y
Sbjct: 1 MLPLSLLNKAQGHPMLIELKNGDTFNGHLVNCDPYMNVNLREVIRTSADGEKFWKIPEIY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRG+TIKYLRVPDE++D V+EE
Sbjct: 61 IRGSTIKYLRVPDEILDLVKEE 82
>gi|430813206|emb|CCJ29431.1| unnamed protein product [Pneumocystis jirovecii]
Length = 639
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 71/138 (51%), Positives = 93/138 (67%), Gaps = 18/138 (13%)
Query: 10 AQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYL 69
AQG+PMLVELKNGETYNGH+V+CDTWMN+ L+EVI T+ DGDRF+R+ ECYIRG+TIKYL
Sbjct: 519 AQGYPMLVELKNGETYNGHMVSCDTWMNLILKEVIQTNADGDRFFRLSECYIRGSTIKYL 578
Query: 70 RVPDEVIDKVQ-EETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDGGAKGAGG 128
R+PDE+I+ V+ + ++R +R G+ RG GRG++ G +G
Sbjct: 579 RIPDEIINIVKLQNEQNRDNRSQRGISRG-----------------GRGINLGRGRGMQN 621
Query: 129 GRGRGGPGGKPGGSRGGG 146
+GRGG G R GG
Sbjct: 622 IQGRGGRTSDRGRGRIGG 639
>gi|195339803|ref|XP_002036506.1| GM11687 [Drosophila sechellia]
gi|194130386|gb|EDW52429.1| GM11687 [Drosophila sechellia]
Length = 140
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 71/73 (97%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECYIRG+TIKYLR+PDE
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIKYLRIPDE 60
Query: 75 VIDKVQEETKSRS 87
VID V+E+ +++S
Sbjct: 61 VIDMVKEDAQAKS 73
>gi|195473653|ref|XP_002089107.1| GE25987 [Drosophila yakuba]
gi|194175208|gb|EDW88819.1| GE25987 [Drosophila yakuba]
Length = 140
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 71/73 (97%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPECYIRG+TIKYLR+PDE
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIKYLRIPDE 60
Query: 75 VIDKVQEETKSRS 87
VID V+E+ +++S
Sbjct: 61 VIDMVKEDAQAKS 73
>gi|449542283|gb|EMD33263.1| hypothetical protein CERSUDRAFT_87573 [Ceriporiopsis subvermispora
B]
Length = 132
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 84/135 (62%), Gaps = 26/135 (19%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET+NGHL+NCD +MNI LREV TS +GDRFW++ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLINCDNFMNITLREVYQTSAEGDRFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRG+TIKYLRVPD ++D V+EE + R RE G S R
Sbjct: 61 IRGSTIKYLRVPDTLLDAVKEE---------------QNRAREAGRSAR----------- 94
Query: 121 GGAKGAGGGRGRGGP 135
G G RGRG P
Sbjct: 95 GAHVSGAGARGRGMP 109
>gi|195384890|ref|XP_002051145.1| GJ13818 [Drosophila virilis]
gi|194147602|gb|EDW63300.1| GJ13818 [Drosophila virilis]
Length = 140
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLV+CD+WMNI+LR+VICTSKDGDRFWRMPEC+IRG+TIKYLR+PDE
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECFIRGSTIKYLRIPDE 60
Query: 75 VIDKVQEETKSRSDRKPPGVGRGRG 99
VID V+E+ +++S R + + RG
Sbjct: 61 VIDMVKEDAQAKS-RNRAEMNKNRG 84
>gi|395328270|gb|EJF60663.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 132
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 84/135 (62%), Gaps = 26/135 (19%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV TS +GD+FW++ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDKFWKLRECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRG+TIKYLRVPD ++D V+EE + R RE G S R
Sbjct: 61 IRGSTIKYLRVPDTLLDAVKEE---------------QNRAREAGRSAR----------- 94
Query: 121 GGAKGAGGGRGRGGP 135
G G RGRG P
Sbjct: 95 GAHVSGAGQRGRGAP 109
>gi|398390838|ref|XP_003848879.1| hypothetical protein MYCGRDRAFT_96235 [Zymoseptoria tritici
IPO323]
gi|339468755|gb|EGP83855.1| hypothetical protein MYCGRDRAFT_96235 [Zymoseptoria tritici
IPO323]
Length = 129
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 75/89 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELK GET NGHLV+CDT+MNI L+EV+ TS DGD+F+R+PECY
Sbjct: 1 MLPLGLLTAAQGHPMLVELKTGETLNGHLVSCDTYMNIMLKEVVQTSPDGDKFFRLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDR 89
+RGN IKYLRVPDEV+D V+++ ++ +
Sbjct: 61 VRGNNIKYLRVPDEVVDAVKDQQAAQQSQ 89
>gi|281201415|gb|EFA75627.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 157
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 74/93 (79%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+T QGH ++VELKNGET+NG+LVNCD WMNI+L+ VI TSKD D+FW++ CY
Sbjct: 1 MLPLSLLRTGQGHQIMVELKNGETFNGYLVNCDNWMNINLKNVIRTSKDSDKFWKLQSCY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPG 93
IRGNTIKY+ VPDE+ID V EE + +P
Sbjct: 61 IRGNTIKYISVPDEIIDMVVEEEQVVKQHQPAS 93
>gi|170041265|ref|XP_001848390.1| small nuclear ribonucleoprotein sm [Culex quinquefasciatus]
gi|167864864|gb|EDS28247.1| small nuclear ribonucleoprotein sm [Culex quinquefasciatus]
Length = 156
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/72 (83%), Positives = 70/72 (97%)
Query: 16 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
LVELKNGETYNGHLV+CDTWMNI+LREVICTSKDGD+FWRMPECYIRG+TIKYLR+PDEV
Sbjct: 3 LVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRMPECYIRGSTIKYLRIPDEV 62
Query: 76 IDKVQEETKSRS 87
ID V+E+ +++S
Sbjct: 63 IDMVKEDVQAKS 74
>gi|409080918|gb|EKM81278.1| hypothetical protein AGABI1DRAFT_112946 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197836|gb|EKV47763.1| hypothetical protein AGABI2DRAFT_192916 [Agaricus bisporus var.
bisporus H97]
Length = 131
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 71/82 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV TS DGDRFW++ ECY
Sbjct: 1 MLPLSLLSAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSADGDRFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRG+TIKYLRVPD ++D+V+EE
Sbjct: 61 IRGSTIKYLRVPDTLLDQVKEE 82
>gi|240275971|gb|EER39484.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325093332|gb|EGC46642.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 124
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 79/99 (79%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLAAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
+RGN IKYLRVP+EV+D +++ +++S + G + RG
Sbjct: 61 VRGNNIKYLRVPEEVVDLAKDQQQNQSSNRTRGSQQHRG 99
>gi|390597253|gb|EIN06653.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 130
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 86/135 (63%), Gaps = 27/135 (20%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET+NGHL+NCD +MNI LREV TS DG+RFW++ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLINCDNFMNITLREVYQTSADGERFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
IRG+TIKYLRVPD ++D V+EE + R RE G S R
Sbjct: 61 IRGSTIKYLRVPDTLLDAVKEE---------------QTRAREAGRSAR----------- 94
Query: 121 GGAKGAGGGRGRGGP 135
G+ +GG GRG P
Sbjct: 95 -GSHVSGGRGGRGAP 108
>gi|225563373|gb|EEH11652.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 124
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 79/99 (79%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
+RGN IKYLRVP+EV+D +++ +++S + G + RG
Sbjct: 61 VRGNNIKYLRVPEEVVDLAKDQQQNQSSNRTRGSQQHRG 99
>gi|154281997|ref|XP_001541811.1| hypothetical protein HCAG_03909 [Ajellomyces capsulatus NAm1]
gi|150411990|gb|EDN07378.1| hypothetical protein HCAG_03909 [Ajellomyces capsulatus NAm1]
Length = 124
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 79/99 (79%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
+RGN IKYLRVP+EV+D +++ +++S + G + RG
Sbjct: 61 VRGNNIKYLRVPEEVVDLAKDQQQNQSSNRTRGSQQHRG 99
>gi|299750975|ref|XP_001829959.2| U6 snRNA-associated Sm-like protein LSm4 [Coprinopsis cinerea
okayama7#130]
gi|298409160|gb|EAU91881.2| U6 snRNA-associated Sm-like protein LSm4 [Coprinopsis cinerea
okayama7#130]
Length = 129
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 71/82 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV TS +GDRFW++ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDRFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRG+TIKYLRVPD+++D V+EE
Sbjct: 61 IRGSTIKYLRVPDQLLDAVKEE 82
>gi|242007513|ref|XP_002424584.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508027|gb|EEB11846.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 126
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 84/132 (63%), Gaps = 21/132 (15%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLV+CD WMNI LREVICTS+DGD+FWRMPECYIRG+TIKY+R+PDE
Sbjct: 1 MLVELKNGETYNGHLVSCDNWMNIILREVICTSRDGDKFWRMPECYIRGSTIKYVRIPDE 60
Query: 75 VIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDGGAKGAGGGRGRGG 134
VID V+EE V + RGRG S +G G G GR + G
Sbjct: 61 VIDMVKEE----------AVLKSRGRGELKNRSNSNQRG-----------GRGTGRNQFG 99
Query: 135 PGGKPGGSRGGG 146
GK +R
Sbjct: 100 GRGKSSITRNSN 111
>gi|17533617|ref|NP_495514.1| Protein LSM-4 [Caenorhabditis elegans]
gi|12230257|sp|Q19952.1|LSM4_CAEEL RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|351065126|emb|CCD66279.1| Protein LSM-4 [Caenorhabditis elegans]
Length = 123
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 72/83 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLLKTAQ HPMLVELKNGETYNGHL CD+WMNIHL +VI TSKDGD+F++M E Y
Sbjct: 2 VLPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKFFKMSEAY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
+RG+TIKYLR+P+ V+D V+ E
Sbjct: 62 VRGSTIKYLRIPETVVDLVKTEV 84
>gi|341899817|gb|EGT55752.1| CBN-LSM-4 protein [Caenorhabditis brenneri]
Length = 123
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 71/83 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLLKTAQ HPMLVELKNGETYNGHL CD WMNIHL +VI TSKDGD+F++M E Y
Sbjct: 2 VLPLSLLKTAQNHPMLVELKNGETYNGHLKACDAWMNIHLVDVIFTSKDGDKFFKMSEAY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
+RG+TIKYLR+P+ V+D V+ E
Sbjct: 62 VRGSTIKYLRIPETVVDLVKSEV 84
>gi|392591224|gb|EIW80552.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 127
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 71/82 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV TS DGDRFW++ ECY
Sbjct: 1 MLPLSLLSAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSADGDRFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRG+TIKYLRVPD+++D V+E+
Sbjct: 61 IRGSTIKYLRVPDQLLDVVKED 82
>gi|268562665|ref|XP_002646730.1| C. briggsae CBR-LSM-4 protein [Caenorhabditis briggsae]
Length = 124
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 71/83 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLLKTAQ HPMLVELKNGETYNGHL CD WMNIHL +VI TSKDGD+F++M E Y
Sbjct: 2 VLPLSLLKTAQNHPMLVELKNGETYNGHLKACDAWMNIHLVDVIFTSKDGDKFFKMSEAY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
+RG+TIKYLR+P+ V+D V+ E
Sbjct: 62 VRGSTIKYLRIPETVVDLVKTEV 84
>gi|308503320|ref|XP_003113844.1| CRE-LSM-4 protein [Caenorhabditis remanei]
gi|308263803|gb|EFP07756.1| CRE-LSM-4 protein [Caenorhabditis remanei]
Length = 123
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 71/83 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLLKTAQ HPMLVELKNGETYNGHL CD WMNIHL +VI TSKDGD+F++M E Y
Sbjct: 2 VLPLSLLKTAQNHPMLVELKNGETYNGHLKACDAWMNIHLVDVIFTSKDGDKFFKMSEAY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
+RG+TIKYLR+P+ V+D V+ E
Sbjct: 62 VRGSTIKYLRIPETVVDLVKTEV 84
>gi|452845143|gb|EME47076.1| hypothetical protein DOTSEDRAFT_124881, partial [Dothistroma
septosporum NZE10]
Length = 126
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 71/84 (84%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELK GET NGHLV CDT+MNI L+EV+ TS DGD+F+R+PECY+
Sbjct: 2 LPLGLLTAAQGHPMLVELKTGETLNGHLVACDTYMNITLKEVVQTSPDGDKFFRLPECYV 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKS 85
RGN IKYLRVPDEV+D V+E+ S
Sbjct: 62 RGNNIKYLRVPDEVVDAVKEQQTS 85
>gi|340517649|gb|EGR47892.1| predicted protein [Trichoderma reesei QM6a]
Length = 152
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 73/87 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ L+EV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFMRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
++GN IKYLRVPDE+ID+V E+ K++
Sbjct: 61 VKGNNIKYLRVPDEIIDQVTEQQKNQQ 87
>gi|367045678|ref|XP_003653219.1| hypothetical protein THITE_2115403 [Thielavia terrestris NRRL
8126]
gi|347000481|gb|AEO66883.1| hypothetical protein THITE_2115403 [Thielavia terrestris NRRL
8126]
Length = 127
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 72/87 (82%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ LREV+ TS +GDRF R+PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVLCDTWMNLTLREVVQTSPEGDRFMRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
++GN IKYLRVPDE+ID V+E+ +S
Sbjct: 61 VKGNNIKYLRVPDEIIDIVKEQQSQQS 87
>gi|358394136|gb|EHK43537.1| hypothetical protein TRIATDRAFT_266952 [Trichoderma atroviride
IMI 206040]
Length = 130
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 73/87 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ L+EV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFMRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
++GN IKYLRVPDE+ID+V E+ K++
Sbjct: 61 VKGNNIKYLRVPDEIIDQVTEQQKNQQ 87
>gi|212537193|ref|XP_002148752.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
marneffei ATCC 18224]
gi|210068494|gb|EEA22585.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
marneffei ATCC 18224]
Length = 170
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 75/87 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ T+ +GDRF+R+PE Y
Sbjct: 53 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTTPEGDRFFRLPEVY 112
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
+RGN IKYLRVP+E++D V+E+ +++S
Sbjct: 113 VRGNNIKYLRVPEEILDIVKEQQQNQS 139
>gi|393222663|gb|EJD08147.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 130
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 71/82 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LL AQ PMLVELKNGET+NGHLVNCD +MNI LREV TS D DRFW++ ECY
Sbjct: 1 MLPLTLLNAAQNRPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSADADRFWKLTECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRG+TIKYLRVPD+++D+V+EE
Sbjct: 61 IRGSTIKYLRVPDKLLDEVKEE 82
>gi|409044160|gb|EKM53642.1| hypothetical protein PHACADRAFT_260106 [Phanerochaete carnosa
HHB-10118-sp]
Length = 130
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 71/82 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV TS +GD+FW++ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDKFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRG+TIKYLRVPD+++D V+EE
Sbjct: 61 IRGSTIKYLRVPDQLLDVVKEE 82
>gi|391341871|ref|XP_003745250.1| PREDICTED: uncharacterized protein LOC100904769 [Metaseiulus
occidentalis]
Length = 196
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 73/84 (86%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLS LKTAQ HPMLVELKNGETYNGHLV+CD WMNI+L EVIC S++GD+ WR+PECY+
Sbjct: 82 LPLSPLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLGEVICKSREGDKVWRIPECYV 141
Query: 62 RGNTIKYLRVPDEVIDKVQEETKS 85
R NTI++ R+PDEVI+ V+E+ +
Sbjct: 142 RCNTIRFPRIPDEVIEMVKEDINN 165
>gi|327304028|ref|XP_003236706.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326462048|gb|EGD87501.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 121
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 79/103 (76%), Gaps = 6/103 (5%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRE 103
+RGN IKYLRVP+EV+D +++ +S+ GR RG R+
Sbjct: 61 VRGNNIKYLRVPEEVVDLARDQQQSQQS------GRNRGGDRQ 97
>gi|452819749|gb|EME26802.1| U6 snRNA-associated Sm-like protein LSm4 isoform 2 [Galdieria
sulphuraria]
Length = 127
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 77/89 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLLK AQG P+LVELK+G+TYNGHLVN D+WMN++LREV+ TS++GDRFW++ E Y
Sbjct: 2 VLPLSLLKAAQGQPVLVELKSGDTYNGHLVNIDSWMNLNLREVVWTSREGDRFWKIAEIY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDR 89
+RGNT+KYLRVP+E++D + ++ +D+
Sbjct: 62 VRGNTVKYLRVPEEIVDTLTDQQSQTTDK 90
>gi|294866382|ref|XP_002764688.1| Small nuclear ribonucleoprotein Sm D1, putative [Perkinsus
marinus ATCC 50983]
gi|239864378|gb|EEQ97405.1| Small nuclear ribonucleoprotein Sm D1, putative [Perkinsus
marinus ATCC 50983]
Length = 349
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 71/83 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LP+SLLKTAQG P++VELKNGE Y+G L NCD+WMN+H+R+ + TSKDGDRFW++ E Y
Sbjct: 2 VLPMSLLKTAQGQPIMVELKNGEAYSGVLANCDSWMNLHIRDAVLTSKDGDRFWKLAEAY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
IRGN IKYLR+PD V+D VQE+
Sbjct: 62 IRGNHIKYLRIPDGVVDMVQEDA 84
>gi|378734306|gb|EHY60765.1| hypothetical protein HMPREF1120_08709 [Exophiala dermatitidis
NIH/UT8656]
Length = 135
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 70/81 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCDTWMN+ L+EV+ TS +GDRFWR+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDTWMNLTLKEVVQTSPEGDRFWRLPEAY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
+RGN IKYLRVP+E+I+ +E
Sbjct: 61 VRGNNIKYLRVPEEIIELARE 81
>gi|295674033|ref|XP_002797562.1| small nuclear ribonucleoprotein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280212|gb|EEH35778.1| small nuclear ribonucleoprotein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 124
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 80/109 (73%), Gaps = 6/109 (5%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ T+ +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTTPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGR 109
+RGN IKYLRVP+E++D K + +P GRG + R D SGR
Sbjct: 61 VRGNNIKYLRVPEEIVDL----AKDQQQNQPSNRGRGSQQHRVD--SGR 103
>gi|345560998|gb|EGX44114.1| hypothetical protein AOL_s00210g95 [Arthrobotrys oligospora ATCC
24927]
Length = 145
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 73/87 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LL T QGHP+LVELKNGET NGHLV+CDTWMN+ L+EVI TS DG+ F R+PE Y
Sbjct: 1 MLPLTLLTTVQGHPLLVELKNGETLNGHLVSCDTWMNLTLKEVIQTSPDGETFHRLPEAY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
+RGN IKYLRVPDE+ID V+E+ ++
Sbjct: 61 VRGNNIKYLRVPDEIIDIVKEQQAQQA 87
>gi|242207126|ref|XP_002469417.1| predicted protein [Postia placenta Mad-698-R]
gi|220731446|gb|EED85290.1| predicted protein [Postia placenta Mad-698-R]
Length = 106
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 69/81 (85%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV T+ DGDRFW++ ECYI
Sbjct: 2 LPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDRFWKLKECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEE 82
RG+TIKYLRVPD ++D V+EE
Sbjct: 62 RGSTIKYLRVPDTLLDAVKEE 82
>gi|449300793|gb|EMC96805.1| hypothetical protein BAUCODRAFT_122769 [Baudoinia compniacensis
UAMH 10762]
Length = 125
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 72/81 (88%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCDT+MN+ L+EV+ TS +GD+F+R+PECY
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDTYMNLTLKEVVQTSPEGDKFFRLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
+RGN IKYLRVPDE++D V++
Sbjct: 61 VRGNNIKYLRVPDEIVDIVKD 81
>gi|225684632|gb|EEH22916.1| U6 snRNP-associated protein Lsm4 [Paracoccidioides brasiliensis
Pb03]
gi|226286829|gb|EEH42342.1| small nuclear ribonucleoprotein [Paracoccidioides brasiliensis
Pb18]
Length = 124
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 80/109 (73%), Gaps = 6/109 (5%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ T+ +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTTPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGR 109
+RGN IKYLRVP+E++D K + +P GRG + R D SGR
Sbjct: 61 VRGNNIKYLRVPEEIVDI----AKDQQQNQPSNRGRGSQQHRVD--SGR 103
>gi|46121885|ref|XP_385496.1| hypothetical protein FG05320.1 [Gibberella zeae PH-1]
Length = 154
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 70/81 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV+CDTWMN+ L+EV+ TS +GDRF R+PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFVRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
++GN IKYLRVPDE+ID+V E
Sbjct: 61 VKGNNIKYLRVPDEIIDQVSE 81
>gi|367022520|ref|XP_003660545.1| hypothetical protein MYCTH_2298987 [Myceliophthora thermophila
ATCC 42464]
gi|347007812|gb|AEO55300.1| hypothetical protein MYCTH_2298987 [Myceliophthora thermophila
ATCC 42464]
Length = 128
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 71/86 (82%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ LREV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLREVVQTSPEGDKFMRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
++GN IKYLRVPDE+ID V+E+ +
Sbjct: 61 VKGNNIKYLRVPDEIIDHVKEQQSQQ 86
>gi|452819748|gb|EME26801.1| U6 snRNA-associated Sm-like protein LSm4 isoform 1 [Galdieria
sulphuraria]
Length = 110
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 77/89 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLLK AQG P+LVELK+G+TYNGHLVN D+WMN++LREV+ TS++GDRFW++ E Y
Sbjct: 2 VLPLSLLKAAQGQPVLVELKSGDTYNGHLVNIDSWMNLNLREVVWTSREGDRFWKIAEIY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDR 89
+RGNT+KYLRVP+E++D + ++ +D+
Sbjct: 62 VRGNTVKYLRVPEEIVDTLTDQQSQTTDK 90
>gi|393239356|gb|EJD46888.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 136
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 71/82 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV TS +GDRFW++ ECY
Sbjct: 1 MLPLSLLNAAQSKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDRFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRG+TIKYLRVPD+++D V++E
Sbjct: 61 IRGSTIKYLRVPDQLLDTVKQE 82
>gi|242212742|ref|XP_002472203.1| predicted protein [Postia placenta Mad-698-R]
gi|220728761|gb|EED82649.1| predicted protein [Postia placenta Mad-698-R]
Length = 96
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 69/81 (85%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV T+ DGDRFW++ ECYI
Sbjct: 2 LPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDRFWKLKECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEE 82
RG+TIKYLRVPD ++D V+EE
Sbjct: 62 RGSTIKYLRVPDTLLDAVKEE 82
>gi|302881905|ref|XP_003039863.1| hypothetical protein NECHADRAFT_85726 [Nectria haematococca mpVI
77-13-4]
gi|256720730|gb|EEU34150.1| hypothetical protein NECHADRAFT_85726 [Nectria haematococca mpVI
77-13-4]
Length = 125
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 70/81 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV+CDTWMN+ LREV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLREVVQTSPEGDKFVRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
++GN IKYLRVPDE+ID+V E
Sbjct: 61 VKGNNIKYLRVPDEIIDQVSE 81
>gi|355477275|ref|NP_001239058.1| U6 snRNA-associated Sm-like protein LSm4 isoform 2 [Homo sapiens]
gi|395750752|ref|XP_003779150.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 2
[Pongo abelii]
gi|397493883|ref|XP_003817825.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 2
[Pan paniscus]
gi|402904784|ref|XP_003915220.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 2
[Papio anubis]
gi|426387788|ref|XP_004060344.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 2
[Gorilla gorilla gorilla]
gi|431922013|gb|ELK19186.1| U6 snRNA-associated Sm-like protein LSm4 [Pteropus alecto]
Length = 125
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 68/72 (94%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE
Sbjct: 1 MLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDE 60
Query: 75 VIDKVQEETKSR 86
+ID V+EE ++
Sbjct: 61 IIDMVKEEVVAK 72
>gi|298715431|emb|CBJ28042.1| Sm-like protein LSm4 [Ectocarpus siliculosus]
Length = 165
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 74/89 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKTAQG PMLVELKNG+TYNG L NCD+WMNI L++VI TS+D D+F +M E Y
Sbjct: 1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDR 89
+RGN+IKY+ +P+EV+D VQEE S+ R
Sbjct: 61 VRGNSIKYVTIPEEVLDMVQEEDLSKEKR 89
>gi|342870013|gb|EGU73372.1| hypothetical protein FOXB_16133 [Fusarium oxysporum Fo5176]
Length = 127
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 72/86 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV+CDTWMN+ L+EV+ TS +GDRF R+PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFVRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
++GN IKYLRVPDE+ID++ + +R
Sbjct: 61 VKGNNIKYLRVPDEIIDQISQHLTTR 86
>gi|326470583|gb|EGD94592.1| small nuclear ribonucleoprotein [Trichophyton tonsurans CBS 112818]
gi|326484638|gb|EGE08648.1| small nuclear ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 121
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 79/103 (76%), Gaps = 6/103 (5%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRE 103
+RGN IKYLRVP+EV+D +++ +++ GR RG R+
Sbjct: 61 VRGNNIKYLRVPEEVVDLARDQQQNQQS------GRNRGGDRQ 97
>gi|326432761|gb|EGD78331.1| hypothetical protein PTSG_09397 [Salpingoeca sp. ATCC 50818]
Length = 115
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 71/84 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSL++ A HPMLVELKNGE+YNGHLVNCD +MNI LR V TSKDGDRFW++ ECY
Sbjct: 1 MLPLSLIRAAVNHPMLVELKNGESYNGHLVNCDHYMNIILRGVTLTSKDGDRFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
IRG+TIKYLR+PDE+ID V + K
Sbjct: 61 IRGSTIKYLRLPDEIIDMVIQSEK 84
>gi|261195536|ref|XP_002624172.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239588044|gb|EEQ70687.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239610465|gb|EEQ87452.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
Length = 124
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 73/86 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ LREV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILREVVQTSPEGDRFFRLPEMY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RGN IKYLRVP+EV+D +++ +++
Sbjct: 61 VRGNNIKYLRVPEEVVDLAKDQQQNQ 86
>gi|145232181|ref|XP_001399544.1| U6 snRNA-associated Sm-like protein LSm4 [Aspergillus niger CBS
513.88]
gi|134056455|emb|CAL00622.1| unnamed protein product [Aspergillus niger]
Length = 121
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 73/87 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHL NCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
+RGN IKYLR+P+E+I+ V+E+ ++S
Sbjct: 61 VRGNNIKYLRIPEEIIEMVKEQQANQS 87
>gi|344241344|gb|EGV97447.1| U6 snRNA-associated Sm-like protein LSm4 [Cricetulus griseus]
Length = 124
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 66/69 (95%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE
Sbjct: 1 MLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDE 60
Query: 75 VIDKVQEET 83
+ID V+EE
Sbjct: 61 IIDMVREEA 69
>gi|336372413|gb|EGO00752.1| hypothetical protein SERLA73DRAFT_121184 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385171|gb|EGO26318.1| hypothetical protein SERLADRAFT_367910 [Serpula lacrymans var.
lacrymans S7.9]
Length = 115
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV TS +GDRFW++ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDRFWKLRECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQ-EETKSR 86
IRG+TIKYLRVPD ++D V+ E+T++R
Sbjct: 61 IRGSTIKYLRVPDTLLDAVKDEQTRAR 87
>gi|302681117|ref|XP_003030240.1| hypothetical protein SCHCODRAFT_57519 [Schizophyllum commune
H4-8]
gi|300103931|gb|EFI95337.1| hypothetical protein SCHCODRAFT_57519 [Schizophyllum commune
H4-8]
Length = 129
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 71/81 (87%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LREV T+ DGD+FW++ ECYI
Sbjct: 2 LPLSLLTAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDKFWKLKECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEE 82
RG+TIKYLR+PDE++D+V++E
Sbjct: 62 RGSTIKYLRIPDELLDQVKDE 82
>gi|119481265|ref|XP_001260661.1| small nuclear ribonucleoprotein [Neosartorya fischeri NRRL 181]
gi|146322938|ref|XP_755534.2| U6 snRNA-associated Sm-like protein LSM4 [Aspergillus fumigatus
Af293]
gi|119408815|gb|EAW18764.1| small nuclear ribonucleoprotein [Neosartorya fischeri NRRL 181]
gi|129558535|gb|EAL93496.2| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
fumigatus Af293]
Length = 119
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHL NCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RGN IKYLR+P+E+++ V+E+ +S+
Sbjct: 61 VRGNNIKYLRIPEEIVEMVKEQQQSQ 86
>gi|126345432|ref|XP_001373339.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like, partial
[Monodelphis domestica]
Length = 124
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/71 (81%), Positives = 67/71 (94%)
Query: 16 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
LVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+
Sbjct: 1 LVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEI 60
Query: 76 IDKVQEETKSR 86
ID V+EE S+
Sbjct: 61 IDMVKEEVVSK 71
>gi|238496529|ref|XP_002379500.1| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
flavus NRRL3357]
gi|220694380|gb|EED50724.1| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
flavus NRRL3357]
gi|391868822|gb|EIT78031.1| small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 121
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 74/90 (82%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHL NCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
IRGN IKYLR+P+E+I+ V+E+ +++ +
Sbjct: 61 IRGNNIKYLRIPEEIIEMVKEQQQNQPSNR 90
>gi|315051216|ref|XP_003174982.1| hypothetical protein MGYG_02512 [Arthroderma gypseum CBS 118893]
gi|311340297|gb|EFQ99499.1| hypothetical protein MGYG_02512 [Arthroderma gypseum CBS 118893]
Length = 124
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 79/103 (76%), Gaps = 6/103 (5%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 4 LLPLGLLNAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEGDRFFRLPEVY 63
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRE 103
+RGN IKYLRVP+EV+D +++ +++ GR RG R+
Sbjct: 64 VRGNNIKYLRVPEEVVDLARDQQQNQQS------GRSRGGDRQ 100
>gi|317147121|ref|XP_003189888.1| U6 snRNA-associated Sm-like protein LSm4 [Aspergillus oryzae
RIB40]
Length = 121
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 74/90 (82%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHL NCD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
IRGN IKYLR+P+E+I+ V+E+ +++ +
Sbjct: 61 IRGNNIKYLRIPEEIIEMVKEQPQNQPSNR 90
>gi|56757161|gb|AAW26752.1| SJCHGC06377 protein [Schistosoma japonicum]
gi|226490214|emb|CAX69349.1| putative U6 snRNA-associated Sm-like protein LSm4 [Schistosoma
japonicum]
Length = 128
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELK+GETYNGHLV CD WMNIHL+EVICTS+DGDRFW+MPECYIRG+ IKYLR+PD+
Sbjct: 1 MLVELKSGETYNGHLVACDDWMNIHLKEVICTSRDGDRFWKMPECYIRGSIIKYLRIPDD 60
Query: 75 VIDKVQEETK-SRSDRKPPGVGRGRGRGREDGASGR 109
VIDKV+E+ + ++ + GRG + A GR
Sbjct: 61 VIDKVKEDLQLAKMRNRSQSADTGRGGFHRNKAKGR 96
>gi|443922752|gb|ELU42142.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 137
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 69/81 (85%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL AQ PMLVELKNGET+NGHLVNCDT+MNI LREV TS +GDRFW++ ECYI
Sbjct: 12 LPLSLLNAAQNKPMLVELKNGETFNGHLVNCDTFMNITLREVYQTSPEGDRFWKLKECYI 71
Query: 62 RGNTIKYLRVPDEVIDKVQEE 82
RG+ IKYLRVPD ++D V+EE
Sbjct: 72 RGSMIKYLRVPDALLDNVKEE 92
>gi|408393268|gb|EKJ72533.1| hypothetical protein FPSE_07170 [Fusarium pseudograminearum
CS3096]
Length = 139
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 70/81 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL LL AQGHPMLVELKNGET NGHLV+CDTWMN+ L+EV+ TS +GDRF R+PE Y
Sbjct: 16 LLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFVRLPEVY 75
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
++GN IKYLRVPDE+ID+V E
Sbjct: 76 VKGNNIKYLRVPDEIIDQVSE 96
>gi|242809941|ref|XP_002485479.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716104|gb|EED15526.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
stipitatus ATCC 10500]
Length = 118
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 73/86 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ T+ +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTTPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RGN IKYLRVP+E++D V+E+ + +
Sbjct: 61 VRGNNIKYLRVPEEILDVVREQQQHQ 86
>gi|452001361|gb|EMD93821.1| hypothetical protein COCHEDRAFT_1154389 [Cochliobolus
heterostrophus C5]
Length = 134
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 70/82 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A GHPMLVELK+GET NG LVNCDTWMN+ LREV+ TS DGD+F R+PE Y
Sbjct: 1 MLPLGLLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKFMRLPEIY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
+RG+TIKYLRVPDE++D V+E+
Sbjct: 61 VRGSTIKYLRVPDEIVDIVKEQ 82
>gi|451849184|gb|EMD62488.1| hypothetical protein COCSADRAFT_221383 [Cochliobolus sativus
ND90Pr]
Length = 141
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 70/82 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A GHPMLVELK+GET NG LVNCDTWMN+ LREV+ TS DGD+F R+PE Y
Sbjct: 1 MLPLGLLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKFMRLPEIY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
+RG+TIKYLRVPDE++D V+E+
Sbjct: 61 VRGSTIKYLRVPDEIVDIVKEQ 82
>gi|425765914|gb|EKV04555.1| U6 snRNA-associated Sm-like protein LSM4, putative [Penicillium
digitatum PHI26]
gi|425779249|gb|EKV17325.1| U6 snRNA-associated Sm-like protein LSM4, putative [Penicillium
digitatum Pd1]
Length = 121
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 74/88 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CD +MN+ LREV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVTCDNFMNLILREVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSD 88
IRGN IKYLRVP+E+++ V+E+ ++++
Sbjct: 61 IRGNNIKYLRVPEEIVEIVKEQQQNQAQ 88
>gi|358382645|gb|EHK20316.1| hypothetical protein TRIVIDRAFT_68894 [Trichoderma virens Gv29-8]
Length = 129
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 69/81 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ L+EV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFMRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
++GN IKYLRVPDE+ID+V E
Sbjct: 61 VKGNNIKYLRVPDEIIDQVTE 81
>gi|328876176|gb|EGG24539.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 162
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 70/82 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+T QGH ++VELKNGETYNG LVNCD WMNI++R VI TSKD D+FW++ CY
Sbjct: 1 MLPLSLLRTGQGHQIMVELKNGETYNGILVNCDNWMNINMRTVIRTSKDSDKFWKLQGCY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRGNTIKY+ VPDE+ID V EE
Sbjct: 61 IRGNTIKYITVPDEIIDLVAEE 82
>gi|294932805|ref|XP_002780450.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239890384|gb|EER12245.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 126
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 71/83 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LP+SLLKTAQG P++VELKNGE Y+G L NCD+WMN+H+R+ + TSKDGDRFW++ E Y
Sbjct: 2 VLPMSLLKTAQGQPIMVELKNGEAYSGVLANCDSWMNLHIRDAVLTSKDGDRFWKLAEAY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
IRGN +KYLR+PD V+D VQE+
Sbjct: 62 IRGNHVKYLRIPDGVVDMVQEDA 84
>gi|358365662|dbj|GAA82284.1| U6 snRNA-associated Sm-like protein LSM4 [Aspergillus kawachii
IFO 4308]
Length = 121
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 73/87 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHL +CD WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLASCDNWMNLILKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
+RGN IKYLR+P+E+I+ V+E+ ++S
Sbjct: 61 VRGNNIKYLRIPEEIIEMVKEQQANQS 87
>gi|320590330|gb|EFX02773.1| bar domain containing protein [Grosmannia clavigera kw1407]
Length = 1158
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 59/81 (72%), Positives = 67/81 (82%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ L+ V+ TS DGD F R+PE Y
Sbjct: 365 MLPLGLLSAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLKGVVQTSPDGDSFMRIPEVY 424
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
++GN IKYLRVPDE+ID V+E
Sbjct: 425 VKGNNIKYLRVPDEIIDAVKE 445
>gi|350634474|gb|EHA22836.1| hypothetical protein ASPNIDRAFT_127789 [Aspergillus niger ATCC
1015]
Length = 118
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 72/87 (82%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELKNGET NGHL NCD WMN+ L+EV+ TS +GDRF+R+PE Y+
Sbjct: 2 LPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPEVYV 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSD 88
RGN IKYLR+P+E+I+ V+E+ ++S
Sbjct: 62 RGNNIKYLRIPEEIIEMVKEQQANQSQ 88
>gi|154311062|ref|XP_001554861.1| hypothetical protein BC1G_06649 [Botryotinia fuckeliana B05.10]
Length = 690
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 56/86 (65%), Positives = 73/86 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL LL AQGHPMLVELK+GET NGHLV+CDTWMN+ L+EV+ TS DGD+F R+PE Y
Sbjct: 2 VLPLGLLTAAQGHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPEIY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
++GN IKYLR+PDE+ID V+++ + +
Sbjct: 62 VKGNNIKYLRMPDEIIDLVKDQQQGQ 87
>gi|281343535|gb|EFB19119.1| hypothetical protein PANDA_000549 [Ailuropoda melanoleuca]
Length = 96
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 67/71 (94%)
Query: 16 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
LVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+
Sbjct: 2 LVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEI 61
Query: 76 IDKVQEETKSR 86
ID V+EE ++
Sbjct: 62 IDMVKEEVVAK 72
>gi|402216859|gb|EJT96942.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 132
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 70/82 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGET NGHLVNCD +MNI LREV TS +GDRFW++ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETLNGHLVNCDNFMNITLREVYQTSPEGDRFWKLKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
+RG+TIKYLRVPD+++D+VQ E
Sbjct: 61 VRGSTIKYLRVPDQLLDEVQLE 82
>gi|403174347|ref|XP_003333333.2| hypothetical protein PGTG_15117 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170935|gb|EFP88914.2| hypothetical protein PGTG_15117 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 248
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 71/82 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LL AQG PMLVELKNGET+NGHL+ CD +MN+ +REV TS +G++FW++PECY
Sbjct: 100 MLPLALLHGAQGKPMLVELKNGETFNGHLIQCDNFMNLTMREVYQTSANGEQFWKLPECY 159
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRGNTIKY+RV D VID+V+++
Sbjct: 160 IRGNTIKYIRVTDNVIDQVKQQ 181
>gi|317147119|ref|XP_001821897.2| U6 snRNA-associated Sm-like protein LSm4 [Aspergillus oryzae
RIB40]
Length = 123
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 73/89 (82%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELKNGET NGHL NCD WMN+ L+EV+ TS +GDRF+R+PE YI
Sbjct: 4 LPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPEVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
RGN IKYLR+P+E+I+ V+E+ +++ +
Sbjct: 64 RGNNIKYLRIPEEIIEMVKEQPQNQPSNR 92
>gi|189197851|ref|XP_001935263.1| hypothetical protein PTRG_04930 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981211|gb|EDU47837.1| hypothetical protein PTRG_04930 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 131
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 70/82 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A GHPMLVELK+GET NG LVNCDTWMN+ LREV+ TS DGD+F ++PE Y
Sbjct: 1 MLPLGLLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKFMKLPEIY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
+RG+TIKYLRVPDE++D V+E+
Sbjct: 61 VRGSTIKYLRVPDEIVDVVKEQ 82
>gi|259479587|tpe|CBF69945.1| TPA: U6 snRNA-associated Sm-like protein LSM4, putative
(AFU_orthologue; AFUA_2G12020) [Aspergillus nidulans
FGSC A4]
Length = 119
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 69/81 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHL NCD WMN+ LREV+ TS +GDRF+++PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILREVVQTSPEGDRFFKLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
+RGN IKYLR+P+E+ID V+E
Sbjct: 61 VRGNNIKYLRIPEEIIDMVKE 81
>gi|327349106|gb|EGE77963.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 167
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 73/89 (82%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ LREV+ TS +GDRF+R+PE Y+
Sbjct: 45 LPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILREVVQTSPEGDRFFRLPEMYV 104
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
RGN IKYLRVP+EV+D +++ +++ +
Sbjct: 105 RGNNIKYLRVPEEVVDLAKDQQQNQPSNR 133
>gi|255946281|ref|XP_002563908.1| Pc20g14300 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588643|emb|CAP86759.1| Pc20g14300 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 121
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 73/86 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CD +MN+ LREV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVTCDNFMNLILREVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRGN IKYLRVP+E+++ V+E+ +++
Sbjct: 61 IRGNNIKYLRVPEEIVEIVKEQQQNQ 86
>gi|453086958|gb|EMF14999.1| Sm-like ribonucleo protein [Mycosphaerella populorum SO2202]
Length = 138
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELK GET NGHLV+CDT+MNI L+EV+ TS +GD F+R+ ECY
Sbjct: 1 MLPLGLLTAAQGHPMLVELKTGETLNGHLVSCDTYMNITLKEVVQTSPEGDHFFRLAECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RGN IKYLRVPDEV+D V+++ ++
Sbjct: 61 VRGNNIKYLRVPDEVVDVVKDQQANQ 86
>gi|325186130|emb|CCA20631.1| unnamed protein product putative [Albugo laibachii Nc14]
Length = 143
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 68/76 (89%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNG+TYNGH NCDTWMNI+L +VICTSKDGDRFW+MPECYIRGNT+KY+RVP+E
Sbjct: 1 MLVELKNGDTYNGHFKNCDTWMNINLCDVICTSKDGDRFWKMPECYIRGNTVKYVRVPNE 60
Query: 75 VIDKVQEETKSRSDRK 90
++ VQEE +R DR+
Sbjct: 61 ILGLVQEENTNRKDRQ 76
>gi|121715750|ref|XP_001275484.1| small nuclear ribonucleoprotein [Aspergillus clavatus NRRL 1]
gi|119403641|gb|EAW14058.1| small nuclear ribonucleoprotein [Aspergillus clavatus NRRL 1]
Length = 119
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 72/86 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHL NCD WMN+ L+EV+ S +GDRF+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQASPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRGN IKYLR+P+E+++ V+E+ +++
Sbjct: 61 IRGNNIKYLRIPEEIVEMVKEQQQNQ 86
>gi|389743937|gb|EIM85121.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 130
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 80/105 (76%), Gaps = 4/105 (3%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNGE +NGHLVNCD +MNI LREV TS DG+RFW++ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGENFNGHLVNCDNFMNITLREVYQTSADGERFWKVKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE-TKSRSDRKPPGVG---RGRGRG 101
IRG+TIKY+RVP+ ++D V+EE ++R K G RGRGRG
Sbjct: 61 IRGSTIKYIRVPETLLDVVKEEQLRAREAGKSQRGGLNDRGRGRG 105
>gi|294881583|ref|XP_002769420.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239872829|gb|EER02138.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 137
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 71/83 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LP+SLLKTAQG P++VELKNGE Y+G L NCD+WMN+H+R+ + TSKDGDRFW++ E Y
Sbjct: 2 VLPMSLLKTAQGQPIMVELKNGEAYSGVLANCDSWMNLHIRDAVLTSKDGDRFWKLAEAY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
IRGN IKYLR+PD V+D VQE+
Sbjct: 62 IRGNHIKYLRIPDGVVDMVQEDA 84
>gi|320035592|gb|EFW17533.1| small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392868800|gb|EAS34594.2| small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 125
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 77/97 (79%), Gaps = 3/97 (3%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL +QGHPMLVELKNGET NGHLVNCD+WMN+ L+EV+ TS +GDRF+R+PE Y
Sbjct: 1 MLPLGLLNASQGHPMLVELKNGETLNGHLVNCDSWMNLTLKEVVQTSPEGDRFFRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRG 97
+RGN IK+LRVP+EV++ +++ + +P GRG
Sbjct: 61 VRGNNIKFLRVPEEVVEIARDQ---QQQNQPSTRGRG 94
>gi|67540086|ref|XP_663817.1| hypothetical protein AN6213.2 [Aspergillus nidulans FGSC A4]
gi|40738809|gb|EAA57999.1| hypothetical protein AN6213.2 [Aspergillus nidulans FGSC A4]
Length = 775
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 57/80 (71%), Positives = 68/80 (85%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELKNGET NGHL NCD WMN+ LREV+ TS +GDRF+++PE Y+
Sbjct: 12 LPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILREVVQTSPEGDRFFKLPEVYV 71
Query: 62 RGNTIKYLRVPDEVIDKVQE 81
RGN IKYLR+P+E+ID V+E
Sbjct: 72 RGNNIKYLRIPEEIIDMVKE 91
>gi|83769760|dbj|BAE59895.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 133
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 73/89 (82%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELKNGET NGHL NCD WMN+ L+EV+ TS +GDRF+R+PE YI
Sbjct: 14 LPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPEVYI 73
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
RGN IKYLR+P+E+I+ V+E+ +++ +
Sbjct: 74 RGNNIKYLRIPEEIIEMVKEQPQNQPSNR 102
>gi|115383910|ref|XP_001208502.1| hypothetical protein ATEG_01137 [Aspergillus terreus NIH2624]
gi|114196194|gb|EAU37894.1| hypothetical protein ATEG_01137 [Aspergillus terreus NIH2624]
Length = 119
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 73/86 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHL NCD WMN+ L+EV+ TS +GDRF+++PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFKLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
IRGN IKYLR+P+E+++ V+E+ +++
Sbjct: 61 IRGNNIKYLRIPEEIVEMVREQQQNQ 86
>gi|392560868|gb|EIW54050.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 161
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 75/108 (69%), Gaps = 15/108 (13%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLL AQ PMLVELKNGET+NGHLVNCD +MNI LRE TS +GDRFW++ ECYI
Sbjct: 32 LPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREAYQTSAEGDRFWKLKECYI 91
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGR 109
RG+TIKYLRVPD ++D V++E + R RE G S R
Sbjct: 92 RGSTIKYLRVPDTLLDAVKDE---------------QNRAREAGRSAR 124
>gi|440638708|gb|ELR08627.1| hypothetical protein GMDG_03318 [Geomyces destructans 20631-21]
Length = 124
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 72/84 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV+CDTWMN+ L+EV+ TS +GD+F+R+ E Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDKFFRLAEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
++GN IKYLRVPDE+ID V+++ +
Sbjct: 61 VKGNNIKYLRVPDEIIDLVKDQQQ 84
>gi|85107173|ref|XP_962325.1| hypothetical protein NCU07683 [Neurospora crassa OR74A]
gi|28923928|gb|EAA33089.1| hypothetical protein NCU07683 [Neurospora crassa OR74A]
Length = 130
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 70/85 (82%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL +L AQGHPMLVELKNGET NGHL+ CDTWMN+ LREV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGILTAAQGHPMLVELKNGETLNGHLIQCDTWMNLTLREVVQTSPEGDKFVRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKS 85
++GN IKYLRVPD+VID +E+ S
Sbjct: 61 VKGNNIKYLRVPDDVIDIAREQQHS 85
>gi|221055864|ref|XP_002259070.1| U6 snRNA associated Sm-like protein Ls [Plasmodium knowlesi
strain H]
gi|193809141|emb|CAQ39843.1| U6 snRNA associated Sm-like protein Ls,putative [Plasmodium
knowlesi strain H]
Length = 126
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 72/89 (80%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ PL+LLK +Q P++VELKNGETY+G LV CD +MN+H++ +ICTSKDGD+FW++ ECY
Sbjct: 2 VFPLTLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKFWKISECY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDR 89
+RGN++KY+RV DE ID+ EET + R
Sbjct: 62 VRGNSVKYIRVQDEAIDQAIEETNEQKAR 90
>gi|412992977|emb|CCO16510.1| U6 snRNA-associated Sm-like protein LSm4 [Bathycoccus prasinos]
Length = 122
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 73/92 (79%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLLKT+QGH MLVELKNGETYNG L CD WMN+HL +V+CT+KDGDRF + C+
Sbjct: 1 MLPLSLLKTSQGHSMLVELKNGETYNGVLNACDAWMNVHLTKVVCTNKDGDRFHELETCF 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
IRGNTIKY+ V +E+I +EE + R+ ++ P
Sbjct: 61 IRGNTIKYMCVQEEIIQLAKEENERRAAQRGP 92
>gi|336270436|ref|XP_003349977.1| hypothetical protein SMAC_00869 [Sordaria macrospora k-hell]
gi|380095367|emb|CCC06840.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 130
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 69/82 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL +L AQGHPMLVELKNGET NGHL+ CDTWMN+ LREV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGILTAAQGHPMLVELKNGETLNGHLIQCDTWMNLTLREVVQTSPEGDKFARLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
++GN IKYLRVPD+VID +E+
Sbjct: 61 VKGNNIKYLRVPDDVIDIAREQ 82
>gi|296812049|ref|XP_002846362.1| small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238841618|gb|EEQ31280.1| small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 126
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 66/76 (86%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELKNGET NGHLVNCD WMN+ L+EV+ TS +GDRF+R+PE Y+
Sbjct: 8 LPLGLLNAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEGDRFFRLPEVYV 67
Query: 62 RGNTIKYLRVPDEVID 77
RGN IKYLRVP+EV+D
Sbjct: 68 RGNNIKYLRVPEEVVD 83
>gi|71020725|ref|XP_760593.1| hypothetical protein UM04446.1 [Ustilago maydis 521]
gi|46100481|gb|EAK85714.1| hypothetical protein UM04446.1 [Ustilago maydis 521]
Length = 146
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 85/143 (59%), Gaps = 10/143 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNG T+NGHLV CD +MN+ LREV TS G++FW+ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGSTFNGHLVACDNFMNLTLREVYETSASGEQFWKQKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKV-QEETKSRSDRKPPGVGRGRGRGREDGASGRQ--------T 111
IRG+TIKY RV D VID+V Q E ++R R+ G G T
Sbjct: 61 IRGSTIKYCRVADSVIDQVRQREEQARKQRQQSGSSANVSGGANSANRAGAANGARGAYT 120
Query: 112 KGIGRGLDDGGAKGA-GGGRGRG 133
+G G D GA+G G RGRG
Sbjct: 121 RGARGGTADRGARGTNAGARGRG 143
>gi|452986281|gb|EME86037.1| hypothetical protein MYCFIDRAFT_130274, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 126
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 69/80 (86%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELK GET NGHLV+CDT+MN+ L+EV+ TS +GD+F+R+ ECY+
Sbjct: 2 LPLGLLHAAQGHPMLVELKTGETLNGHLVSCDTYMNLTLKEVVQTSPEGDKFFRLAECYV 61
Query: 62 RGNTIKYLRVPDEVIDKVQE 81
RGN IKYLRVPDEV+D V+E
Sbjct: 62 RGNNIKYLRVPDEVVDAVKE 81
>gi|347837957|emb|CCD52529.1| hypothetical protein [Botryotinia fuckeliana]
Length = 122
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 72/84 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL LL AQGHPMLVELK+GET NGHLV+CDTWMN+ L+EV+ TS DGD+F R+PE Y
Sbjct: 2 VLPLGLLTAAQGHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPEIY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
++GN IKYLR+PDE+ID V+++ +
Sbjct: 62 VKGNNIKYLRMPDEIIDLVKDQQQ 85
>gi|310795553|gb|EFQ31014.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 128
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 69/81 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ L+EV+ TS +GD+F ++PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFVKIPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
++GN IKYLRVPD++ID V+E
Sbjct: 61 VKGNNIKYLRVPDDIIDVVKE 81
>gi|440791795|gb|ELR13033.1| LSM domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 131
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 64/67 (95%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNGHLVNCD WMNI+LR+VICTS+DG+RFWR+P+CYIRGNTIKYL +PDE
Sbjct: 1 MLVELKNGETYNGHLVNCDGWMNINLRDVICTSRDGERFWRIPQCYIRGNTIKYLCIPDE 60
Query: 75 VIDKVQE 81
VID VQE
Sbjct: 61 VIDMVQE 67
>gi|402079351|gb|EJT74616.1| glycine rich protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 141
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 68/81 (83%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGH M+VELKNGET NGHLV CDTWMN+ ++EV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGLLNAAQGHAMMVELKNGETLNGHLVMCDTWMNLTMKEVVQTSPEGDKFMRLPEIY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
++GN IKYLRVPDEVID V+E
Sbjct: 61 VKGNNIKYLRVPDEVIDLVKE 81
>gi|156098332|ref|XP_001615198.1| U6 snRNA associated Sm-like protein Lsm4 [Plasmodium vivax Sal-1]
gi|148804072|gb|EDL45471.1| U6 snRNA associated Sm-like protein Lsm4, putative [Plasmodium
vivax]
Length = 127
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 72/89 (80%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ PL+LLK +Q P++VELKNGETY+G LV CD +MN+H++ +ICTSKDGD+FW++ ECY
Sbjct: 2 VFPLTLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKFWKISECY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDR 89
+RGN++KY+RV D+ ID+ EET + R
Sbjct: 62 VRGNSVKYIRVQDQAIDQAIEETNEQKAR 90
>gi|380477058|emb|CCF44358.1| small nuclear ribonucleoprotein [Colletotrichum higginsianum]
Length = 170
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 68/80 (85%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ L+EV+ TS +GD+F ++PE Y+
Sbjct: 41 LPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFVKIPEVYV 100
Query: 62 RGNTIKYLRVPDEVIDKVQE 81
+GN IKYLRVPD++ID V+E
Sbjct: 101 KGNNIKYLRVPDDIIDVVKE 120
>gi|116196218|ref|XP_001223921.1| hypothetical protein CHGG_04707 [Chaetomium globosum CBS 148.51]
gi|88180620|gb|EAQ88088.1| hypothetical protein CHGG_04707 [Chaetomium globosum CBS 148.51]
Length = 127
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 67/79 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ LREV+ TS +GD+F R+PE Y
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVLCDTWMNLTLREVVQTSPEGDKFVRLPEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKV 79
++GN IKYLRVPD++ID V
Sbjct: 61 VKGNNIKYLRVPDDIIDVV 79
>gi|303315215|ref|XP_003067615.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107285|gb|EER25470.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 144
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 76/96 (79%), Gaps = 3/96 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL +QGHPMLVELKNGET NGHLVNCD+WMN+ L+EV+ TS +GDRF+R+PE Y+
Sbjct: 21 LPLGLLNASQGHPMLVELKNGETLNGHLVNCDSWMNLTLKEVVQTSPEGDRFFRLPEVYV 80
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRG 97
RGN IK+LRVP+EV++ +++ + +P GRG
Sbjct: 81 RGNNIKFLRVPEEVVEIARDQ---QQQNQPSTRGRG 113
>gi|58265314|ref|XP_569813.1| glycine rich protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226045|gb|AAW42506.1| glycine rich protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 117
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQG PMLVELKNG T+NGHLV CDT+MN+ LREV TS DG+RFW+M E +
Sbjct: 1 MLPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERFWKMKEMF 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPPGVGRG 97
I+GN IKY R+ D ++++ EE K+R+ + G RG
Sbjct: 61 IKGNIIKYFRIADNILEQAAEEQDKARAANRARGGARG 98
>gi|389583620|dbj|GAB66354.1| U6 snRNA associated Sm-like protein Lsm4 [Plasmodium cynomolgi
strain B]
Length = 153
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 71/88 (80%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
PL+LLK +Q P++VELKNGETY+G LV CD +MN+H++ +ICTSKDGD+FW++ ECY+
Sbjct: 30 FPLTLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKFWKISECYV 89
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDR 89
RGN++KY+RV D+ ID+ EET + R
Sbjct: 90 RGNSVKYIRVQDQAIDQAIEETNEQKAR 117
>gi|156034609|ref|XP_001585723.1| hypothetical protein SS1G_13239 [Sclerotinia sclerotiorum 1980]
gi|154698643|gb|EDN98381.1| hypothetical protein SS1G_13239 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 122
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 69/80 (86%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL LL AQGHPMLVELK+GET NGHLV+CDTWMN+ L+EV+ TS DGD+F R+PE Y
Sbjct: 2 VLPLGLLTAAQGHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPEIY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQ 80
++GN IKYLR+PDE+ID V+
Sbjct: 62 VKGNNIKYLRMPDEIIDLVK 81
>gi|224015193|ref|XP_002297255.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968091|gb|EED86446.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 139
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 76/85 (89%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLK+A P+LVELK+G TYNG LVNCDT+MN++LR+V+CTSK+GD+FW++ ECYI
Sbjct: 2 LPLSLLKSATTLPLLVELKSGTTYNGRLVNCDTYMNLNLRDVVCTSKEGDKFWKLNECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+++KYLR+P++ +++V+EE + R
Sbjct: 62 RGSSVKYLRLPEDAVERVKEEDEGR 86
>gi|224015187|ref|XP_002297252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968088|gb|EED86443.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 139
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 76/85 (89%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLK+A P+LVELK+G TYNG LVNCDT+MN++LR+V+CTSK+GD+FW++ ECYI
Sbjct: 2 LPLSLLKSATTLPLLVELKSGTTYNGRLVNCDTYMNLNLRDVVCTSKEGDKFWKLNECYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+++KYLR+P++ +++V+EE + R
Sbjct: 62 RGSSVKYLRLPEDAVERVKEEDEGR 86
>gi|258597219|ref|XP_001347757.2| lsm4 homologue, putative [Plasmodium falciparum 3D7]
gi|254832602|gb|AAN35670.2| lsm4 homologue, putative [Plasmodium falciparum 3D7]
Length = 126
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 71/86 (82%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ PL+LLK +Q P++VELKNGETY+G LV CD +MN+H++ +ICTSKDGD+FW++ ECY
Sbjct: 2 VFPLTLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKFWKISECY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RGN+IKY+RV D+ I++ EET +
Sbjct: 62 VRGNSIKYIRVQDQAIEQAIEETAEQ 87
>gi|428164901|gb|EKX33911.1| hypothetical protein GUITHDRAFT_98209 [Guillardia theta CCMP2712]
Length = 125
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/68 (80%), Positives = 63/68 (92%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGETYNG LVNCD WMN+ LR+V+CTS+DGD+FW++PECYIRGN IKYLRVPDE
Sbjct: 1 MLVELKNGETYNGILVNCDIWMNLSLRDVVCTSRDGDKFWKIPECYIRGNNIKYLRVPDE 60
Query: 75 VIDKVQEE 82
VIDKV +E
Sbjct: 61 VIDKVVDE 68
>gi|328862497|gb|EGG11598.1| hypothetical protein MELLADRAFT_31042 [Melampsora larici-populina
98AG31]
Length = 108
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 79/110 (71%), Gaps = 5/110 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL+LL AQG PMLVELKNGET+NGHL+ D +MN+ +REV TS DG++FW++ ECYI
Sbjct: 1 LPLALLHGAQGKPMLVELKNGETFNGHLIQSDNFMNLTMREVYLTSSDGEKFWKLSECYI 60
Query: 62 RGNTIKYLRVPDEVIDKV--QEETKSRSDRKPPGVGRGRGRGREDGASGR 109
RGNTIKY+RV D VID V QE++ + +R G G G G + G S R
Sbjct: 61 RGNTIKYIRVTDNVIDIVKQQEDSYRQQNRSARG---GAGNGTDRGGSER 107
>gi|336470904|gb|EGO59065.1| hypothetical protein NEUTE1DRAFT_116371 [Neurospora tetrasperma
FGSC 2508]
gi|350291974|gb|EGZ73169.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 130
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 69/85 (81%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL +L AQGHPMLVELKNGET NGHL+ CDTWMN+ LREV+ TS +GD+F R+ E Y
Sbjct: 1 MLPLGILTAAQGHPMLVELKNGETLNGHLIQCDTWMNLTLREVVQTSPEGDKFVRLREVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKS 85
++GN IKYLRVPD+VID +E+ S
Sbjct: 61 VKGNNIKYLRVPDDVIDIAREQQHS 85
>gi|82913333|ref|XP_728601.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485036|gb|EAA20166.1| Sm protein, putative [Plasmodium yoelii yoelii]
Length = 130
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 70/88 (79%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
PL+LLK +Q P++VELKNGETY+G LV CD +MN+H++ +ICTSKDGD+FW++ ECY+
Sbjct: 1 FPLTLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKFWKISECYV 60
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDR 89
RG+++KY+RV D+ I+ EET + R
Sbjct: 61 RGSSVKYIRVQDQAIENAIEETAEQKSR 88
>gi|19113071|ref|NP_596279.1| U6 snRNP-associated protein Lsm4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|12230213|sp|O14352.1|LSM4_SCHPO RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|2276355|emb|CAB10801.1| U6 snRNP-associated protein Lsm4 (predicted) [Schizosaccharomyces
pombe]
Length = 121
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 68/82 (82%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LL QG P+LVELKNGET+NGHL NCD +MN+ LREVI T DGD+F+R+PECY
Sbjct: 1 MLPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRGN IKYLR+ DEV+ +V ++
Sbjct: 61 IRGNNIKYLRIQDEVLSQVAKQ 82
>gi|68064470|ref|XP_674219.1| U6 snRNA associated Sm-like protein Ls; U6 snRNA associated
Sm-like protein LsM4 [Plasmodium berghei strain ANKA]
gi|56492635|emb|CAH99966.1| U6 snRNA associated Sm-like protein Ls; U6 snRNA associated
Sm-like protein LsM4, putative [Plasmodium berghei]
Length = 130
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 70/88 (79%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
PL+LLK +Q P++VELKNGETY+G LV CD +MN+H++ +ICTSKDGD+FW++ ECY+
Sbjct: 1 FPLTLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKFWKISECYV 60
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDR 89
RG+++KY+RV D+ I+ EET + R
Sbjct: 61 RGSSVKYIRVQDQAIENAIEETAEQKSR 88
>gi|169606003|ref|XP_001796422.1| hypothetical protein SNOG_06034 [Phaeosphaeria nodorum SN15]
gi|111065978|gb|EAT87098.1| hypothetical protein SNOG_06034 [Phaeosphaeria nodorum SN15]
Length = 187
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
LL A GHPMLVELK+GET NG LVNCDTWMN+ LREV+ TS DGD+F R+PE Y+RG+T
Sbjct: 66 LLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKFMRLPEIYVRGST 125
Query: 66 IKYLRVPDEVIDKVQ-EETKSRSDR 89
IKYLRVPDE++D V+ ++ K +++R
Sbjct: 126 IKYLRVPDEIVDVVKDQQVKDQANR 150
>gi|213406934|ref|XP_002174238.1| U6 snRNP-associated protein Lsm4 [Schizosaccharomyces japonicus
yFS275]
gi|212002285|gb|EEB07945.1| U6 snRNP-associated protein Lsm4 [Schizosaccharomyces japonicus
yFS275]
Length = 119
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LL AQG P+LVELKNGET+NGHL CD +MN+ L+EVI T +GD+F+RMPECY
Sbjct: 1 MLPLTLLNAAQGRPILVELKNGETFNGHLEKCDNYMNLTLQEVIQTMPEGDKFFRMPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKV-QEETKSRSD 88
IRGN IKYLRV DE++++V +++++ R +
Sbjct: 61 IRGNNIKYLRVQDELVEQVAKQQSQHREN 89
>gi|346325131|gb|EGX94728.1| U6 snRNA-associated Sm-like protein LSM4, putative [Cordyceps
militaris CM01]
Length = 163
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 67/85 (78%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELKNGET NGHLVNCDTWMN+ L +V+ TS +GD+F R+ E Y+
Sbjct: 37 LPLGLLNAAQGHPMLVELKNGETLNGHLVNCDTWMNLTLTQVVQTSPEGDKFMRLKEVYV 96
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
+GN IKYLRV +E+I+ E K++
Sbjct: 97 KGNNIKYLRVAEEIIELATEAQKNQ 121
>gi|388583911|gb|EIM24212.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 126
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 72/89 (80%), Gaps = 4/89 (4%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LL AQ P+LVELK+GET+NGHL+ CD +MN+ L++V T+ DG+RFW++PECY
Sbjct: 1 MLPLTLLNGAQNKPLLVELKSGETFNGHLIACDNYMNLTLKQVFQTNADGERFWKLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDR 89
+RGNTIKY+RV DE++D++ K+ DR
Sbjct: 61 LRGNTIKYIRVADELLDQI----KTTQDR 85
>gi|321254335|ref|XP_003193040.1| hypothetical protein CGB_C7440C [Cryptococcus gattii WM276]
gi|317459509|gb|ADV21253.1| hypothetical protein CNBC2050 [Cryptococcus gattii WM276]
Length = 141
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQG PMLVELKNG T+NGHLV CDT+MN+ LREV TS DG+RFW+M E +
Sbjct: 1 MLPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERFWKMKEMF 60
Query: 61 IRGNTIKYLRVPDEVIDK-VQEETKSRS 87
I+GN IKY R+ D+++++ E+ K+R+
Sbjct: 61 IKGNIIKYFRIADDILEQAAAEQDKARA 88
>gi|388855373|emb|CCF51037.1| related to U6 snRNA-associated Sm-like protein LSm4 [Ustilago
hordei]
Length = 149
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 65/82 (79%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNG T+NGHLV CD +MN+ LREV TS G++FW+ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGSTFNGHLVACDNFMNLTLREVYETSASGEQFWKQKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRG+TIKY RV D VID+V+E+
Sbjct: 61 IRGSTIKYCRVADSVIDQVKEQ 82
>gi|134109199|ref|XP_776714.1| hypothetical protein CNBC2050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259394|gb|EAL22067.1| hypothetical protein CNBC2050 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 147
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 65/82 (79%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQG PMLVELKNG T+NGHLV CDT+MN+ LREV TS DG+RFW+M E +
Sbjct: 1 MLPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERFWKMKEMF 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
I+GN IKY R+ D ++++ EE
Sbjct: 61 IKGNIIKYFRIADNILEQAAEE 82
>gi|343425727|emb|CBQ69261.1| related to U6 snRNA-associated Sm-like protein LSm4 [Sporisorium
reilianum SRZ2]
Length = 142
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL AQ PMLVELKNG T+NGHLV CD +MN+ LREV TS G++FW+ ECY
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGSTFNGHLVACDNFMNLTLREVYETSASGEQFWKQKECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE-ETKSRSDRK 90
IRG+TIKY RV D VID+V+E E +R R+
Sbjct: 61 IRGSTIKYCRVADSVIDQVKEHEEHARKQRQ 91
>gi|390981143|pdb|4EMH|A Chain A, Crystal Structure Of Splsm4
gi|390981144|pdb|4EMH|B Chain B, Crystal Structure Of Splsm4
gi|390981145|pdb|4EMH|C Chain C, Crystal Structure Of Splsm4
gi|390981146|pdb|4EMH|D Chain D, Crystal Structure Of Splsm4
gi|390981147|pdb|4EMH|E Chain E, Crystal Structure Of Splsm4
gi|390981148|pdb|4EMH|F Chain F, Crystal Structure Of Splsm4
gi|390981149|pdb|4EMH|G Chain G, Crystal Structure Of Splsm4
gi|390981150|pdb|4EMH|H Chain H, Crystal Structure Of Splsm4
gi|390981151|pdb|4EMH|I Chain I, Crystal Structure Of Splsm4
gi|390981152|pdb|4EMH|J Chain J, Crystal Structure Of Splsm4
gi|390981153|pdb|4EMH|K Chain K, Crystal Structure Of Splsm4
gi|390981154|pdb|4EMH|L Chain L, Crystal Structure Of Splsm4
gi|390981155|pdb|4EMH|M Chain M, Crystal Structure Of Splsm4
gi|390981156|pdb|4EMH|N Chain N, Crystal Structure Of Splsm4
gi|390981157|pdb|4EMH|O Chain O, Crystal Structure Of Splsm4
gi|390981158|pdb|4EMH|P Chain P, Crystal Structure Of Splsm4
gi|390981159|pdb|4EMH|Q Chain Q, Crystal Structure Of Splsm4
gi|390981160|pdb|4EMH|R Chain R, Crystal Structure Of Splsm4
gi|390981161|pdb|4EMH|T Chain T, Crystal Structure Of Splsm4
gi|390981162|pdb|4EMH|U Chain U, Crystal Structure Of Splsm4
gi|390981163|pdb|4EMH|V Chain V, Crystal Structure Of Splsm4
gi|390981164|pdb|4EMH|W Chain W, Crystal Structure Of Splsm4
gi|390981165|pdb|4EMH|X Chain X, Crystal Structure Of Splsm4
gi|390981166|pdb|4EMH|Y Chain Y, Crystal Structure Of Splsm4
Length = 105
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL+LL QG P+LVELKNGET+NGHL NCD + N+ LREVI T DGD+F+R+PECYI
Sbjct: 16 LPLTLLNATQGRPILVELKNGETFNGHLENCDNYXNLTLREVIRTXPDGDKFFRLPECYI 75
Query: 62 RGNTIKYLRVPDEVIDKV-QEETKSRSDR 89
RGN IKYLR+ DEV+ +V +++ + R +R
Sbjct: 76 RGNNIKYLRIQDEVLSQVAKQQAQQRENR 104
>gi|168009632|ref|XP_001757509.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691203|gb|EDQ77566.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 64
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/60 (91%), Positives = 58/60 (96%)
Query: 16 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
LVELKNGETYNGHLVNCDTWMNIHLRE ICTS+DG+ FWRMPEC+IRGNTIKYLRVPDEV
Sbjct: 2 LVELKNGETYNGHLVNCDTWMNIHLREKICTSEDGNCFWRMPECHIRGNTIKYLRVPDEV 61
>gi|353242003|emb|CCA73778.1| related to U6 snRNA-associated Sm-like protein LSm4
[Piriformospora indica DSM 11827]
Length = 126
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 68/84 (80%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLP SLLK AQG PM+VELKNGE++NGHL++CD +MNI LREV T+ D DRFW++ E Y
Sbjct: 1 MLPSSLLKAAQGKPMMVELKNGESFNGHLIDCDAFMNITLREVYQTAADSDRFWKLKEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
IRG+TIKYL+V ++D V+EE +
Sbjct: 61 IRGSTIKYLQVQPALLDAVKEEQQ 84
>gi|392579756|gb|EIW72883.1| hypothetical protein TREMEDRAFT_24586, partial [Tremella
mesenterica DSM 1558]
Length = 104
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL+LL AQG PMLVELKNG T+NGHLV CD +MN+ LREV TS DG+RFW+M E +I
Sbjct: 1 LPLTLLNAAQGKPMLVELKNGVTFNGHLVECDNFMNVTLREVYQTSADGERFWKMKEVFI 60
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPG 93
+GN IKY R+ D ++D +++ K+R+ K G
Sbjct: 61 KGNIIKYFRIADAILDSAFEQQEKNRAAAKTRG 93
>gi|312086540|ref|XP_003145116.1| hypothetical protein LOAG_09541 [Loa loa]
Length = 120
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 62/71 (87%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELK+GETYNGHLV CD WMNIHLR+ ICTS+DGDRF +M E Y+RG+TIKYLR+PD+
Sbjct: 1 MLVELKSGETYNGHLVACDAWMNIHLRDAICTSRDGDRFLKMQEVYVRGSTIKYLRIPDD 60
Query: 75 VIDKVQEETKS 85
V++ V+EE K
Sbjct: 61 VVELVKEEVKE 71
>gi|401413718|ref|XP_003886306.1| hypothetical protein NCLIV_067060 [Neospora caninum Liverpool]
gi|325120726|emb|CBZ56281.1| hypothetical protein NCLIV_067060 [Neospora caninum Liverpool]
Length = 98
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 71/84 (84%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL+LL+ AQ PM+VELK+GETY+G L NCD +MN+HL++ +CTSKDG+RFW++ ECY
Sbjct: 2 VLPLTLLRAAQNRPMMVELKSGETYSGLLANCDGFMNLHLKDSVCTSKDGERFWKLTECY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
IRGN +KY+R+ +EV++ +++ K
Sbjct: 62 IRGNMVKYIRLQEEVLETAKDDKK 85
>gi|407920870|gb|EKG14049.1| Protein-tyrosine phosphatase receptor/non-receptor type
[Macrophomina phaseolina MS6]
Length = 1134
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 56/63 (88%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGET NGHLVNCD WMN+ L+EV+ TS DGDRFWR+PE YIRGN IKYLRVPDE
Sbjct: 1 MLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPDGDRFWRLPEVYIRGNNIKYLRVPDE 60
Query: 75 VID 77
+ID
Sbjct: 61 IID 63
>gi|428671714|gb|EKX72629.1| U6 snRNA-associated protein, putative [Babesia equi]
Length = 111
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL+LL+ + P L+ELKNGETY+G L +CD +MNIH+ V+CTSK G FW++ ECY
Sbjct: 2 VLPLTLLRAGKNQPTLIELKNGETYSGILESCDAFMNIHMLNVVCTSKSGTDFWKLNECY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVG-RGRGRGREDG 105
IRGN +K LR+P+EV + +EE+K + KP V GRGRG+ G
Sbjct: 62 IRGNNVKSLRLPNEVAELAKEESKPAA--KPNAVAYSGRGRGKVLG 105
>gi|50413178|ref|XP_457218.1| DEHA2B05918p [Debaryomyces hansenii CBS767]
gi|49652883|emb|CAG85213.1| DEHA2B05918p [Debaryomyces hansenii CBS767]
Length = 165
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 68/82 (82%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL +A+ P+LVELKNGE+ NG LVNCD+WMN+ L++VI +S +G+ F ++PECY
Sbjct: 1 MLPLYLLTSAKNQPILVELKNGESLNGQLVNCDSWMNLTLKDVIQSSSNGETFVKLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
IRGN IKYLR+P+E++D +E+
Sbjct: 61 IRGNHIKYLRLPEEIMDYAKEQ 82
>gi|399218474|emb|CCF75361.1| unnamed protein product [Babesia microti strain RI]
Length = 122
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL+LL+TAQGHPMLVELKNGET +G L CD +MN+H+R V+ TS++GD+FW++ EC+
Sbjct: 2 VLPLTLLRTAQGHPMLVELKNGETCSGILTTCDGFMNLHMRNVVRTSREGDKFWKINECF 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
+RGN +K +R+PD+V + +EE++ RG+G
Sbjct: 62 VRGNNLKSVRLPDQVANLAEEESRREQLGNLQSTNRGKG 100
>gi|448536329|ref|XP_003871097.1| hypothetical protein CORT_0G02940 [Candida orthopsilosis Co
90-125]
gi|380355453|emb|CCG24972.1| hypothetical protein CORT_0G02940 [Candida orthopsilosis]
Length = 155
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 64/81 (79%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A+ P+LVELK GETYNG+L NCD+WMN+ L EVI T+ DGD F ++PE Y
Sbjct: 1 MLPLYLLTAAKNQPILVELKTGETYNGNLTNCDSWMNLTLHEVIQTNADGDEFAKLPEIY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
I+G IKYLR+PD++ID V+E
Sbjct: 61 IKGMHIKYLRIPDQIIDHVKE 81
>gi|237842601|ref|XP_002370598.1| U6 snRNA associated Sm-like protein LSm4, putative [Toxoplasma
gondii ME49]
gi|211968262|gb|EEB03458.1| U6 snRNA associated Sm-like protein LSm4, putative [Toxoplasma
gondii ME49]
gi|221502719|gb|EEE28439.1| small nuclear ribonucleoprotein sm, putative [Toxoplasma gondii
VEG]
Length = 214
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 67/77 (87%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL+LL+ AQ PM+VELK+GETY+G L +CD +MN+HL++ +CTSKDG+RFW++ ECY
Sbjct: 2 VLPLTLLRAAQNRPMMVELKSGETYSGLLASCDGFMNLHLKDSVCTSKDGERFWKLSECY 61
Query: 61 IRGNTIKYLRVPDEVID 77
IRGN +KY+R+ DEV++
Sbjct: 62 IRGNMVKYIRLQDEVLE 78
>gi|358058113|dbj|GAA96092.1| hypothetical protein E5Q_02753 [Mixia osmundae IAM 14324]
Length = 123
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 66/82 (80%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLP SLL+ A G PMLVELKNGET+NGHL D +MN+ L+EV TS +GD+FW++PECY
Sbjct: 1 MLPDSLLQAALGKPMLVELKNGETFNGHLSGADNFMNLTLKEVYQTSANGDQFWKLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
++G+ IKY+RV D V+D V+E+
Sbjct: 61 LKGHMIKYVRVADNVLDTVKEQ 82
>gi|448085360|ref|XP_004195840.1| Piso0_005263 [Millerozyma farinosa CBS 7064]
gi|359377262|emb|CCE85645.1| Piso0_005263 [Millerozyma farinosa CBS 7064]
Length = 126
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 65/83 (78%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL +A+ P+LVELKNGET NG LVNCD+WMN+ L VI S +G F ++PECY
Sbjct: 1 MLPLYLLTSAKNQPILVELKNGETLNGELVNCDSWMNLTLNNVIQVSANGTNFLKLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
+RGN IKY+R+P+E++D +E+T
Sbjct: 61 VRGNHIKYMRLPEELMDYAKEQT 83
>gi|448080879|ref|XP_004194749.1| Piso0_005263 [Millerozyma farinosa CBS 7064]
gi|359376171|emb|CCE86753.1| Piso0_005263 [Millerozyma farinosa CBS 7064]
Length = 130
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 66/83 (79%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL +A+ P+LVELKNGET NG LVNCD+WMN+ L V+ S++G F ++PECY
Sbjct: 1 MLPLYLLTSAKNQPILVELKNGETLNGELVNCDSWMNLTLNNVVQVSENGTNFLKLPECY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEET 83
+RGN IKY+R+P+E++D +E+T
Sbjct: 61 VRGNHIKYMRLPEELMDYAKEQT 83
>gi|354548533|emb|CCE45270.1| hypothetical protein CPAR2_702830 [Candida parapsilosis]
Length = 161
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 79/134 (58%), Gaps = 17/134 (12%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A+ P+LVELK GETYNG+L NCD+WMN+ L +VI T+ DGD F ++ E Y
Sbjct: 1 MLPLYLLTAAKNQPILVELKTGETYNGNLTNCDSWMNLTLHDVIQTNADGDEFAKIAEIY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQE--------------ETKSRSDRKPPGVGRGRGRGRE--- 103
I+G IKYLR+PD+++D+V+E D + V R G GR+
Sbjct: 61 IKGMHIKYLRIPDQIMDRVKEQQQMYHQQQQHHQHHHHYGQDNRNRFVKRRGGDGRDNRG 120
Query: 104 DGASGRQTKGIGRG 117
D A GR G GR
Sbjct: 121 DAAGGRNNAGSGRN 134
>gi|219124066|ref|XP_002182333.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406294|gb|EEC46234.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 135
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL+LL+ A G P+LVELK G+TYNG +VNCDT+MN++L++VICTS DG+ F ++P CYI
Sbjct: 2 LPLTLLRAANGSPILVELKGGDTYNGRVVNCDTFMNMNLQDVICTSADGEHFSKLPSCYI 61
Query: 62 RGNTIKYLRVPDEVIDK--VQEETKSRS 87
RG++IKYLR+P +++ Q+E + R+
Sbjct: 62 RGSSIKYLRLPPSLLETAAAQQEEEERN 89
>gi|389633655|ref|XP_003714480.1| glycine rich protein [Magnaporthe oryzae 70-15]
gi|351646813|gb|EHA54673.1| glycine rich protein [Magnaporthe oryzae 70-15]
gi|440476439|gb|ELQ45036.1| glycine rich protein [Magnaporthe oryzae Y34]
gi|440489076|gb|ELQ68756.1| glycine rich protein [Magnaporthe oryzae P131]
Length = 121
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 59/67 (88%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
M+VELKNGET NGHLV CDTWMN+ LREV+ TS DGD+F R+PE Y++GN IKYLRVPDE
Sbjct: 1 MMVELKNGETLNGHLVQCDTWMNLTLREVVQTSPDGDKFMRLPEIYVKGNNIKYLRVPDE 60
Query: 75 VIDKVQE 81
VID+V+E
Sbjct: 61 VIDQVKE 67
>gi|396487975|ref|XP_003842766.1| hypothetical protein LEMA_P085260.1 [Leptosphaeria maculans JN3]
gi|312219343|emb|CBX99287.1| hypothetical protein LEMA_P085260.1 [Leptosphaeria maculans JN3]
Length = 114
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELK+GET NG L+NCDTWMN+ LREV+ TS DGD+F R+PE Y+RG+TIKYLRVPDE
Sbjct: 1 MLVELKSGETLNGLLINCDTWMNLTLREVVQTSADGDKFMRLPEIYVRGSTIKYLRVPDE 60
Query: 75 VIDKVQE-ETKSRSDR 89
++D V+E + K +++R
Sbjct: 61 IVDVVKEQQAKDQANR 76
>gi|330946004|ref|XP_003306672.1| hypothetical protein PTT_19864 [Pyrenophora teres f. teres 0-1]
gi|311315722|gb|EFQ85223.1| hypothetical protein PTT_19864 [Pyrenophora teres f. teres 0-1]
Length = 90
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 60/68 (88%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELK+GET NG LVNCDTWMN+ LREV+ TS DGD+F R+PE Y+RG+TIKYLRVPDE
Sbjct: 1 MLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKFMRLPEIYVRGSTIKYLRVPDE 60
Query: 75 VIDKVQEE 82
++D V+E+
Sbjct: 61 IVDVVKEQ 68
>gi|159129598|gb|EDP54712.1| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
fumigatus A1163]
Length = 105
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 62/72 (86%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGET NGHL NCD WMN+ L+EV+ TS +GDRF+R+PE Y+RGN IKYLR+P+E
Sbjct: 1 MLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPEVYVRGNNIKYLRIPEE 60
Query: 75 VIDKVQEETKSR 86
+++ V+E+ +S+
Sbjct: 61 IVEMVKEQQQSQ 72
>gi|71027801|ref|XP_763544.1| U6 snRNA-associated protein [Theileria parva strain Muguga]
gi|68350497|gb|EAN31261.1| U6 snRNA-associated protein, putative [Theileria parva]
Length = 141
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 68/90 (75%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL+LL+ + P L+ELKNGETY+G L +CD +MN+H+ V+CTSK G FW++ EC+
Sbjct: 2 VLPLTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVNVVCTSKSGTDFWKLDECF 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
IRGNT+K LR+P+EV + +EE + R RK
Sbjct: 62 IRGNTVKSLRLPNEVAEIAKEEKRPRKTRK 91
>gi|361127598|gb|EHK99561.1| putative U6 snRNA-associated Sm-like protein LSm4 [Glarea
lozoyensis 74030]
Length = 115
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ L+EV+ TS DGD+F+R+PE Y
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVTCDTWMNLTLKEVVQTSPDGDKFYRLPEVY 60
Query: 61 IRGN 64
++GN
Sbjct: 61 VKGN 64
>gi|85000985|ref|XP_955211.1| u6 snrna-associated sm-like protein lsm4 [Theileria annulata strain
Ankara]
gi|65303357|emb|CAI75735.1| u6 snrna-associated sm-like protein lsm4, putative [Theileria
annulata]
Length = 105
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 70/103 (67%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPL+LL+ + P L+ELKNGETY+G L +CD +MN+H+ V+CTSK G FW++ EC+
Sbjct: 2 VLPLTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVNVVCTSKSGTDFWKLDECF 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRE 103
IRGNT+K LR+P+EV + +EE R RK R R E
Sbjct: 62 IRGNTVKSLRLPNEVAEIAKEEKHPRKYRKKLLYMERRWRRNE 104
>gi|400596410|gb|EJP64184.1| small nuclear ribonucleoprotein [Beauveria bassiana ARSEF 2860]
Length = 116
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 60/73 (82%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGET NGHLVNCDTWMN+ L+EV+ TS +GD+F R+PE Y++GN IKYLRVP+E
Sbjct: 1 MLVELKNGETLNGHLVNCDTWMNLTLKEVVQTSPEGDKFVRLPEVYVKGNNIKYLRVPEE 60
Query: 75 VIDKVQEETKSRS 87
+I+ E K++
Sbjct: 61 IIELATEAQKNQQ 73
>gi|290984572|ref|XP_002675001.1| predicted protein [Naegleria gruberi]
gi|284088594|gb|EFC42257.1| predicted protein [Naegleria gruberi]
Length = 130
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNGET+NG L NCD +MN++L +V CTS+DG RFW+M + YIRG T+KY+R+ DE
Sbjct: 1 MLVELKNGETFNGTLTNCDQFMNMNLEDVTCTSRDGTRFWKMDKVYIRGYTLKYIRILDE 60
Query: 75 VIDKVQEETKSRSDRKPPGVG 95
+I+KV+EE K +S KP G
Sbjct: 61 IINKVKEEQK-KSRSKPQQQG 80
>gi|344230315|gb|EGV62200.1| Sm-like ribonucleo protein [Candida tenuis ATCC 10573]
Length = 140
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 69/100 (69%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL +A+ P+LVELKNGET NG L NCD+WMN+ L EVI TS + + F ++PE Y
Sbjct: 1 MLPLYLLNSAKSQPILVELKNGETLNGLLTNCDSWMNLTLSEVIQTSPNAEVFTKIPEIY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR 100
IRG+ IKYLR+P++ +D +E+ +++ R GR
Sbjct: 61 IRGSHIKYLRLPEQTMDYAKEQNMINMEQRNKNQNRRGGR 100
>gi|126133080|ref|XP_001383065.1| hypothetical protein PICST_54497 [Scheffersomyces stipitis CBS
6054]
gi|126094890|gb|ABN65036.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 147
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 64/81 (79%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL A+ +L+ELKNGET NG LVNCD+WMN+ L++VI TS +G+ F ++PE YI
Sbjct: 2 LPLYLLTAAKTKQILIELKNGETLNGGLVNCDSWMNLTLKDVIQTSSNGETFLKIPEVYI 61
Query: 62 RGNTIKYLRVPDEVIDKVQEE 82
RGN IKYLR+P+E++D +E+
Sbjct: 62 RGNHIKYLRLPEEIMDYAKEQ 82
>gi|209877859|ref|XP_002140371.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209555977|gb|EEA06022.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 112
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 65/86 (75%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLS++++A H ++VELKNGETY+G L+ D +MN+ L VI TSKDG RF+RM ECY
Sbjct: 2 VLPLSVIRSANKHSIMVELKNGETYSGMLIGVDGFMNLVLNNVISTSKDGQRFFRMSECY 61
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RGN IKY+R+ D +I V++E R
Sbjct: 62 LRGNNIKYIRMNDNIIGTVKDEMIQR 87
>gi|397636074|gb|EJK72132.1| hypothetical protein THAOC_06366, partial [Thalassiosira
oceanica]
Length = 385
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 61/68 (89%), Gaps = 2/68 (2%)
Query: 19 LKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI--RGNTIKYLRVPDEVI 76
+++G TYNG LV+CDT+MNI+LR+V+CTSKDGD+FW++ ECYI RG+++KYLR+P+E +
Sbjct: 2 VESGTTYNGRLVSCDTYMNINLRDVVCTSKDGDQFWKLNECYIRCRGSSVKYLRLPEEAV 61
Query: 77 DKVQEETK 84
D+VQEE K
Sbjct: 62 DRVQEEEK 69
>gi|300122633|emb|CBK23201.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPLSLL+ A+ + +LVEL NGETYNG LV+CD++MN+ L + I T+K G RF+ + ECY
Sbjct: 18 MLPLSLLRAARDNEILVELTNGETYNGKLVSCDSYMNLVLNDAILTTKTGSRFFHLSECY 77
Query: 61 IRGNTIKYLRVPDEVIDKV-QEETKSRSDR 89
IRG T+K +R+ +VI+ V EE S+ +R
Sbjct: 78 IRGATVKCIRLSKDVINNVPAEEQNSKYNR 107
>gi|405119017|gb|AFR93790.1| glycine rich protein [Cryptococcus neoformans var. grubii H99]
Length = 133
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 54/68 (79%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
MLVELKNG T+NGHLV CDT+MN+ LREV TS DG+RFW+M E +I+GN IKY R+ D
Sbjct: 1 MLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERFWKMKEMFIKGNIIKYFRIADN 60
Query: 75 VIDKVQEE 82
++++ EE
Sbjct: 61 ILEQAAEE 68
>gi|443897116|dbj|GAC74458.1| small nuclear ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 244
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 16 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
LVELKNG T+NGHLV CD +MN+ LREV TS G++FW+ ECYIRG+TIKY RV D V
Sbjct: 125 LVELKNGSTFNGHLVACDNFMNLTLREVYETSASGEQFWKQKECYIRGSTIKYCRVADSV 184
Query: 76 IDKVQE-ETKSRSDRK 90
ID+V+E E +R R+
Sbjct: 185 IDQVKETEEAARKQRQ 200
>gi|344299688|gb|EGW30041.1| hypothetical protein SPAPADRAFT_57515 [Spathaspora passalidarum
NRRL Y-27907]
Length = 140
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 61/96 (63%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A+ P+L+ELK GETY G LVN D WMN+ L VI T+ D F + E Y
Sbjct: 1 MLPLYLLTAAKNKPVLIELKTGETYQGDLVNLDPWMNLTLSNVIHTNTGADEFSKETEVY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGR 96
IRG IKYLR+PDE++D +E+ +++ V R
Sbjct: 61 IRGMHIKYLRIPDEIMDYAKEQNLLNMEQRNKNVKR 96
>gi|363755190|ref|XP_003647810.1| hypothetical protein Ecym_7144 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891846|gb|AET40993.1| hypothetical protein Ecym_7144 [Eremothecium cymbalariae
DBVPG#7215]
Length = 189
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A+G MLVELKNGET G L N D WMN+ L V+ K G++ +PE Y
Sbjct: 1 MLPLYLLTNAKGQRMLVELKNGETIEGELTNVDNWMNVTLGNVV--HKGGEQVLELPEIY 58
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRE 103
+RG+ IKY+++ D++IDKV+++ S D G G + R R+
Sbjct: 59 VRGSVIKYIKLQDDIIDKVKQQLNSGKDGSSNGNGPHQNRDRD 101
>gi|406865614|gb|EKD18655.1| pentatricopeptide repeat protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 788
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 56/83 (67%), Gaps = 17/83 (20%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL AQGHPMLVELKNGET NGHLV CDTWMN+ L+EV+ TS
Sbjct: 75 LPLGLLTAAQGHPMLVELKNGETLNGHLVTCDTWMNLTLKEVVQTSP------------- 121
Query: 62 RGNTIKYLRVPDEVIDKVQEETK 84
IKYLRVPDE+ID V+++ +
Sbjct: 122 ----IKYLRVPDEIIDLVKDQQQ 140
>gi|119605095|gb|EAW84689.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_d [Homo sapiens]
Length = 159
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 47/50 (94%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDG 50
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+ G
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRVG 50
>gi|45200801|ref|NP_986371.1| AGL296Wp [Ashbya gossypii ATCC 10895]
gi|44985499|gb|AAS54195.1| AGL296Wp [Ashbya gossypii ATCC 10895]
gi|374109616|gb|AEY98521.1| FAGL296Wp [Ashbya gossypii FDAG1]
Length = 168
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A+G + +ELKNGET G LVN D WMN+ L+ V+ D+ ++PE Y
Sbjct: 1 MLPLYLLTNAKGQKLFIELKNGETIEGELVNVDNWMNLTLQSVVHAGS--DQTLQLPEIY 58
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSD 88
+RG+ IKY+R+ D++I+KV+++ S D
Sbjct: 59 VRGSFIKYIRLQDDIIEKVKQQLNSGKD 86
>gi|322695394|gb|EFY87203.1| small nuclear ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 106
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 20/86 (23%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTS------------- 47
MLPLSLL AQGHPMLVELKNGET NGHLV CDTWMN+ LREV+ TS
Sbjct: 1 MLPLSLLNAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLREVVQTSPVRLTVQSARDGQ 60
Query: 48 -------KDGDRFWRMPECYIRGNTI 66
+ GD+F R+ E Y++GN +
Sbjct: 61 QREANIAQRGDKFVRLKEAYVKGNNV 86
>gi|403222920|dbj|BAM41051.1| U6 snRNA-associated sm-like protein lsm4 [Theileria orientalis
strain Shintoku]
Length = 120
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 56/68 (82%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
+L+ELKNGETY+G L +CD++MN+H+ V+CTSK+G FW++ EC+IRGN +K LR+P+E
Sbjct: 2 VLIELKNGETYSGILDSCDSFMNMHMVNVVCTSKNGTEFWKLNECFIRGNNVKSLRLPNE 61
Query: 75 VIDKVQEE 82
V + +EE
Sbjct: 62 VAEIAKEE 69
>gi|149036058|gb|EDL90724.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 103
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 46/48 (95%)
Query: 36 MNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET 83
MNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE
Sbjct: 1 MNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVREEA 48
>gi|164657129|ref|XP_001729691.1| hypothetical protein MGL_3235 [Malassezia globosa CBS 7966]
gi|159103584|gb|EDP42477.1| hypothetical protein MGL_3235 [Malassezia globosa CBS 7966]
Length = 86
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL+LL A P+LVELKN ET+NGHLV CD +MNI +R+V TS G++FW+MPE Y
Sbjct: 1 MLPLTLLNAAHDGPILVELKNSETFNGHLVACDNYMNITMRDVFQTSSSGEQFWKMPEVY 60
Query: 61 IRGNTIKYL 69
I+G+T+ L
Sbjct: 61 IKGSTVCTL 69
>gi|346970495|gb|EGY13947.1| small nuclear ribonucleoprotein [Verticillium dahliae VdLs.17]
Length = 130
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 22/93 (23%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT--------- 65
MLVELKNGET NGHLV CDTWMN+ L+EV+ TS +GD+F ++PE Y++GN
Sbjct: 1 MLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKFVKIPEVYVKGNNVRTHLCLFI 60
Query: 66 -------------IKYLRVPDEVIDKVQEETKS 85
IKYLRVPD++ D V+E ++
Sbjct: 61 RSSANAKLIAGLQIKYLRVPDDISDIVKENQQN 93
>gi|156083282|ref|XP_001609125.1| U6 snRNA-associated Sm-like protein LSm4 [Babesia bovis T2Bo]
gi|154796375|gb|EDO05557.1| U6 snRNA-associated Sm-like protein LSm4, putative [Babesia bovis]
Length = 104
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 22 GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQE 81
GETY+G L +CD +MN+H+ ICTSK GD FW++ EC+IRGN +K R PDEV E
Sbjct: 11 GETYSGILSSCDAFMNVHMINAICTSKKGDEFWKLSECFIRGNNVKSFRFPDEVATVALE 70
Query: 82 ETKS--RSDRKPPGVGRGRGRGR 102
E+K+ + + G RG RGR
Sbjct: 71 ESKAMVQENMNINGPDRGASRGR 93
>gi|50545437|ref|XP_500256.1| YALI0A19756p [Yarrowia lipolytica]
gi|49646121|emb|CAG84194.1| YALI0A19756p [Yarrowia lipolytica CLIB122]
Length = 131
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LPLSLL AQG PMLVELK+GE+ GHL+ CD WMN+ L+EV S G+ + E Y
Sbjct: 3 VLPLSLLNAAQGQPMLVELKSGESLRGHLLKCDHWMNLTLKEVEEFSASGENTATVSEYY 62
Query: 61 IRGNTIKYLRVPDEVIDKVQ 80
+RG+ IK L++PDE++ ++
Sbjct: 63 VRGSNIKALQLPDELLHSIK 82
>gi|406697343|gb|EKD00606.1| glycine rich protein [Trichosporon asahii var. asahii CBS 8904]
Length = 154
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 22/91 (24%)
Query: 16 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT---------- 65
LVELKNG T+NGHLV+CD +MN+ LREV TS DG++FW+M E +I+GN
Sbjct: 16 LVELKNGVTFNGHLVDCDHFMNVTLREVYQTSADGEKFWKMKEMFIKGNVSDRDYFSPTV 75
Query: 66 ------------IKYLRVPDEVIDKVQEETK 84
IKY R+ D V+D+ EE K
Sbjct: 76 KLAYFQERADLQIKYFRIADSVLDQAAEEQK 106
>gi|241957447|ref|XP_002421443.1| U6 snRNA-associated Sm-like protein, putative [Candida dubliniensis
CD36]
gi|223644787|emb|CAX40778.1| U6 snRNA-associated Sm-like protein, putative [Candida dubliniensis
CD36]
Length = 148
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVI-CTSKDGDR------- 52
MLPL LL A+ P+L+ELK+G+ YNG+L NCD+WMN+ L VI S +G +
Sbjct: 1 MLPLYLLTAAKNKPILIELKSGQIYNGYLTNCDSWMNLTLHNVIQIDSLNGTKEGEGEGE 60
Query: 53 -----------FWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
F ++ E YIRG IKYLR+PD+++ +E+ + R R +
Sbjct: 61 GERDNKEKENVFLKLSEIYIRGIHIKYLRIPDDIMKYAKEQNMINME------NRNRYQK 114
Query: 102 REDGASGRQTKGIG--RGLDDGGAKGAGGGRGR 132
R G GI R ++ +G G GR
Sbjct: 115 RRGVGGGVGAGGINDSRRFNNNRQQGHGHNYGR 147
>gi|255712429|ref|XP_002552497.1| KLTH0C06248p [Lachancea thermotolerans]
gi|238933876|emb|CAR22059.1| KLTH0C06248p [Lachancea thermotolerans CBS 6340]
Length = 175
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A+G +++ELKNGET G L N D WMN+ L +V TS ++ E Y
Sbjct: 1 MLPLYLLTNAKGQQLVIELKNGETIVGQLTNVDNWMNLTLTDVTHTSASDT--VKLSEIY 58
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
+RGN IKY+++ D+VI+KV++
Sbjct: 59 VRGNFIKYIKLQDDVIEKVKQ 79
>gi|312371005|gb|EFR19287.1| hypothetical protein AND_22756 [Anopheles darlingi]
Length = 250
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 50/86 (58%), Gaps = 33/86 (38%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPLSLLKTAQ HPM DGD+FWRMPECYI
Sbjct: 5 LPLSLLKTAQSHPM---------------------------------DGDKFWRMPECYI 31
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRS 87
RG+TIKYLR+PDEVID V+E+ +++S
Sbjct: 32 RGSTIKYLRIPDEVIDMVKEDVQAKS 57
>gi|254564743|ref|XP_002489482.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|238029278|emb|CAY67201.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
Length = 122
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL TA+G P+ VELKN T NG+LV+CD+WMN+ L V+ G+ F + P+ Y
Sbjct: 1 MLPLFLLATAKGEPIQVELKNNVTINGYLVDCDSWMNLTLENVLEVDATGEHFKKFPQFY 60
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
+ G IK +R+ + +ID+ +++ +
Sbjct: 61 VHGVEIKGVRMDENIIDRARQKEQ 84
>gi|328349910|emb|CCA36310.1| Probable U6 snRNA-associated Sm-like protein LSm4 [Komagataella
pastoris CBS 7435]
Length = 146
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL TA+G P+ VELKN T NG+LV+CD+WMN+ L V+ G+ F + P+ Y
Sbjct: 25 MLPLFLLATAKGEPIQVELKNNVTINGYLVDCDSWMNLTLENVLEVDATGEHFKKFPQFY 84
Query: 61 IRGNTIKYLRVPDEVIDKVQEETK 84
+ G IK +R+ + +ID+ +++ +
Sbjct: 85 VHGVEIKGVRMDENIIDRARQKEQ 108
>gi|401885982|gb|EJT50058.1| glycine rich protein [Trichosporon asahii var. asahii CBS 2479]
Length = 63
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLR 70
MLVELKNG T+NGHLV+CD +MN+ LREV TS DG++FW+M E +I+GN + YL+
Sbjct: 1 MLVELKNGVTFNGHLVDCDHFMNVTLREVYQTSADGEKFWKMKEMFIKGN-VSYLQ 55
>gi|254578266|ref|XP_002495119.1| ZYRO0B03762p [Zygosaccharomyces rouxii]
gi|238938009|emb|CAR26186.1| ZYRO0B03762p [Zygosaccharomyces rouxii]
Length = 173
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD--------R 52
MLPL LL A+G M +ELKNGE G L+N D WMN+ L G
Sbjct: 1 MLPLYLLTNAKGQQMSIELKNGEIVEGELINVDNWMNVTLSNASQFDNIGTTVSVGPSKE 60
Query: 53 FWRMPECYIRGNTIKYLRVPDEVIDKVQEE 82
+ E YIRG IKY+R+ DE+ID+V+++
Sbjct: 61 VVKAKEVYIRGTYIKYIRLQDEIIDQVKQQ 90
>gi|390986477|gb|AFM35758.1| hypothetical protein, partial [Oryza eichingeri]
Length = 33
Score = 78.6 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 16 LVELKNGETYNGHLVNCDTWMNIHLREVICTSK 48
LVELKNGETYNGHLVNCDTWMNIHLREVICTSK
Sbjct: 1 LVELKNGETYNGHLVNCDTWMNIHLREVICTSK 33
>gi|50309757|ref|XP_454891.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|15072878|emb|CAC48005.1| hypothetical protein [Kluyveromyces lactis]
gi|49644026|emb|CAG99978.1| KLLA0E20813p [Kluyveromyces lactis]
Length = 183
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
MLPL LL A+G M VELKNGET G L + D WMN+ L V + G+ ++P Y
Sbjct: 1 MLPLYLLTNAKGQTMHVELKNGETVEGTLSDVDNWMNLTLSNVTHVAS-GETL-KLPSFY 58
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
++G+ IKY+ + D++IDKV+++
Sbjct: 59 LKGSFIKYVNLQDDIIDKVKQQ 80
>gi|156846025|ref|XP_001645901.1| hypothetical protein Kpol_1045p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156116571|gb|EDO18043.1| hypothetical protein Kpol_1045p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 193
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF------- 53
MLPL LL A+G + +ELKNGET G L N D WMN+ L +VI D
Sbjct: 1 MLPLYLLTNAKGQKITIELKNGETIKGVLTNVDNWMNLTLSDVIQYDSDALNNGAEKPEG 60
Query: 54 WRMPECYIRGNTIKYLRVPDEVIDKVQEE 82
+PE Y+RG IKY+ + D++I+ V+++
Sbjct: 61 LSVPEIYLRGTYIKYINLQDDIIENVRQQ 89
>gi|365981439|ref|XP_003667553.1| hypothetical protein NDAI_0A01520 [Naumovozyma dairenensis CBS
421]
gi|343766319|emb|CCD22310.1| hypothetical protein NDAI_0A01520 [Naumovozyma dairenensis CBS
421]
Length = 201
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF------- 53
MLPL LL A+G M VELKNGE G L N D WMN+ L V K D F
Sbjct: 1 MLPLYLLTNAKGQQMRVELKNGEVIEGKLTNVDNWMNLTLSNV-SEYKGSDAFASPQTEV 59
Query: 54 WRMPECYIRGNTIKYLRVPDEVIDKVQEE 82
+ E Y+RG IKY+ +PD++ID V+++
Sbjct: 60 MKSTEIYVRGTFIKYINLPDDIIDIVKQQ 88
>gi|151944828|gb|EDN63087.1| conserved protein [Saccharomyces cerevisiae YJM789]
Length = 187
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V S+ +
Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSENNAES 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
+ ++ E YIRG IK++++ D +IDKV+++ S ++ G G R D
Sbjct: 61 SKAVKLNEIYIRGTFIKFIKLQDNIIDKVKQQINSNNNSNSNGPGHKRYYNNRD 114
>gi|367011739|ref|XP_003680370.1| hypothetical protein TDEL_0C02700 [Torulaspora delbrueckii]
gi|359748029|emb|CCE91159.1| hypothetical protein TDEL_0C02700 [Torulaspora delbrueckii]
Length = 175
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD--------R 52
MLPL LL A+G + VELKNGE G L N D WMN+ L V G+
Sbjct: 1 MLPLYLLTNAKGQQVSVELKNGEIVEGELTNVDNWMNLTLSNVSQQDTIGNSGNIAFQKE 60
Query: 53 FWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGR 98
+ E Y+RG IKY+++ D VID+V+++ + + K G R
Sbjct: 61 IVKSQEVYLRGTYIKYIKLQDNVIDQVKQQISNNNGSKDNNSGNFR 106
>gi|605651|gb|AAA58257.1| regulatory protein [Saccharomyces cerevisiae]
gi|190405674|gb|EDV08941.1| U6 snRNA associated protein [Saccharomyces cerevisiae RM11-1a]
gi|207345878|gb|EDZ72558.1| YER112Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271267|gb|EEU06342.1| Lsm4p [Saccharomyces cerevisiae JAY291]
gi|323309425|gb|EGA62642.1| Lsm4p [Saccharomyces cerevisiae FostersO]
gi|323333783|gb|EGA75174.1| Lsm4p [Saccharomyces cerevisiae AWRI796]
gi|323355304|gb|EGA87129.1| Lsm4p [Saccharomyces cerevisiae VL3]
gi|349577787|dbj|GAA22955.1| K7_Lsm4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299814|gb|EIW10906.1| Lsm4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 187
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V S+ +
Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
+ ++ E YIRG IK++++ D +IDKV+++ S ++ G G R D
Sbjct: 61 SKAVKLNEIYIRGTFIKFIKLQDNIIDKVKQQINSNNNSNSNGPGHKRYYNNRD 114
>gi|398364697|ref|NP_011037.3| Lsm4p [Saccharomyces cerevisiae S288c]
gi|731503|sp|P40070.1|LSM4_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm4
gi|603351|gb|AAC03210.1| Uss1p: core protein of small nuclear ribonucleoprotein
[Saccharomyces cerevisiae]
gi|695736|emb|CAA57975.1| USS1 [Saccharomyces cerevisiae]
gi|285811744|tpg|DAA07772.1| TPA: Lsm4p [Saccharomyces cerevisiae S288c]
Length = 187
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V S+ +
Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
+ ++ E YIRG IK++++ D +IDKV+++ S ++ G G R D
Sbjct: 61 SKAVKLNEIYIRGTFIKFIKLQDNIIDKVKQQINSNNNSNSNGPGHKRYYNNRD 114
>gi|323337992|gb|EGA79231.1| Lsm4p [Saccharomyces cerevisiae Vin13]
Length = 187
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V S+ +
Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
+ ++ E YIRG IK++++ D +IDKV+++ S ++ G G R D
Sbjct: 61 SKAVKLNEIYIRGTFIKFIKLQDNIIDKVKQQINSNNNSNSNGPGHKRYYNNRD 114
>gi|385305583|gb|EIF49545.1| small nuclear ribonucleoprotein [Dekkera bruxellensis AWRI1499]
Length = 109
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 49/67 (73%)
Query: 16 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+VELK GET NG L NCD+WMNI +++++ + G+ F+++ Y++G IKY+ + +++
Sbjct: 1 MVELKRGETLNGTLTNCDSWMNITMKDIVVSDAHGENFYKLKSTYVKGIHIKYITMSNDL 60
Query: 76 IDKVQEE 82
IDK +EE
Sbjct: 61 IDKFREE 67
>gi|365761122|gb|EHN02798.1| Lsm4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 177
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V S+ D
Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGTLTNVDNWMNLTLSNVTEYSEENAIDSENNADK 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGR 98
+ ++ E Y+RG IK++++ D +IDKV+++ S + G G R
Sbjct: 61 SKAIKLNEIYVRGTFIKFIKLQDNIIDKVKQQINSNNSSNNSGPGHKR 108
>gi|323305273|gb|EGA59020.1| Lsm4p [Saccharomyces cerevisiae FostersB]
Length = 187
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DG 50
MLPL LL A G M +ELKNGE G L N D WMN+ L V S+ +
Sbjct: 1 MLPLYLLTNAXGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
+ ++ E YIRG IK++++ D +IDKV+++ S ++ G G R D
Sbjct: 61 SKAVKLNEIYIRGTFIKFIKLQDNIIDKVKQQINSNNNSNSNGPGHKRYYNNRD 114
>gi|260944226|ref|XP_002616411.1| hypothetical protein CLUG_03652 [Clavispora lusitaniae ATCC
42720]
gi|238850060|gb|EEQ39524.1| hypothetical protein CLUG_03652 [Clavispora lusitaniae ATCC
42720]
Length = 71
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
+L + + +LVELKNGET G L NCD+WMN+ L V+ G++F ++ E YIRG+
Sbjct: 1 MLTSIKNEEILVELKNGETVIGKLSNCDSWMNLTLSNVVHNYNKGEKFNKIEEIYIRGSH 60
Query: 66 IKYLRVPDEV 75
IKYLR+PD V
Sbjct: 61 IKYLRLPDSV 70
>gi|401626033|gb|EJS44001.1| lsm4p [Saccharomyces arboricola H-6]
Length = 179
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTS----------KDG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V S +
Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGTLTNVDNWMNLTLSNVTEYSGESAINSENNAEN 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGR 98
++ ++ E Y+RG IK++++ D +IDKV+++ S ++ G G R
Sbjct: 61 NKAVKLNEIYVRGTFIKFIKLQDNIIDKVKQQINSNNNSNNNGPGHKR 108
>gi|323348917|gb|EGA83154.1| Lsm4p [Saccharomyces cerevisiae Lalvin QA23]
Length = 187
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V S+ +
Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNXES 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
+ + E YIRG IK++++ D +IDKV+++ S ++ G G R D
Sbjct: 61 SKAVKXNEIYIRGTFIKFIKLQDNIIDKVKQQINSNNNSNSNGPGHKRYYNNRD 114
>gi|365766129|gb|EHN07630.1| Lsm4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 187
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V S+ +
Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
+ + E YIRG IK++++ D +IDKV+++ S ++ G G R D
Sbjct: 61 SKAVKSNEIYIRGTFIKFIKLQDNIIDKVKQQINSNNNSNSNGPGHKRYYNNRD 114
>gi|444730614|gb|ELW70992.1| Uridine-cytidine kinase 2 [Tupaia chinensis]
Length = 492
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
Query: 10 AQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
AQ HPML ELK+GETY+ HLV+CD MN+ LREVI GDR W MPEC+I
Sbjct: 2 AQNHPMLGELKDGETYSDHLVSCDNGMNVSLREVIY----GDRLWCMPECHI 49
>gi|259146036|emb|CAY79296.1| Lsm4p [Saccharomyces cerevisiae EC1118]
Length = 187
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V S+ +
Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNVES 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
+ + E YIRG IK++++ D +IDKV+++ S ++ G G R D
Sbjct: 61 SKAVKSNEIYIRGTFIKFIKLQDNIIDKVKQQINSNNNSNSNGPGHKRYYNNRD 114
>gi|403356719|gb|EJY77960.1| hypothetical protein OXYTRI_00397 [Oxytricha trifallax]
Length = 187
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 16 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+V+ KNGE+Y+G L+ CD WMN++L++VI T+ G +F + + +IRGN +K +++ +E+
Sbjct: 1 MVDTKNGESYDGTLLKCDDWMNLYLKDVIRTTTTG-QFSKFEQVFIRGNHVKNIQLSEEI 59
Query: 76 IDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQT 111
I+ Q E K R K G G++ G S Q+
Sbjct: 60 IENYQAELKRRQAEKAIQ-GNFESEGKQRGGSRSQS 94
>gi|390362888|ref|XP_003730250.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like, partial
[Strongylocentrotus purpuratus]
Length = 59
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 48 KDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR 86
+DGDRFWRMPECYIRG+TIKYLR+PDEVID V+EE S+
Sbjct: 2 EDGDRFWRMPECYIRGSTIKYLRIPDEVIDMVKEEVVSK 40
>gi|366989241|ref|XP_003674388.1| hypothetical protein NCAS_0A14510 [Naumovozyma castellii CBS 4309]
gi|342300251|emb|CCC68009.1| hypothetical protein NCAS_0A14510 [Naumovozyma castellii CBS 4309]
Length = 182
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD-------RF 53
MLPL LL A+G M VELKNGE G L N D WMN+ L V K D
Sbjct: 1 MLPLYLLTNAKGQQMRVELKNGEIVEGKLTNVDNWMNLTLSNV-SEYKSSDTIATPQTEV 59
Query: 54 WRMPECYIRGNTIKYLRVPDEVIDKVQEET-----------KSRSDRKPPGVGRGRGR 100
+ E Y+RG IKY+ + D++ID V+++ K +++R P RG R
Sbjct: 60 VKSTEIYVRGTFIKYINLQDDIIDIVKQQINNNMNNSNRDRKYQNNRYPSSGSRGNYR 117
>gi|410084212|ref|XP_003959683.1| hypothetical protein KAFR_0K01940 [Kazachstania africana CBS
2517]
gi|372466275|emb|CCF60548.1| hypothetical protein KAFR_0K01940 [Kazachstania africana CBS
2517]
Length = 182
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD-----RFWR 55
MLPL LL A+G M VELK+GE G L N D WMN+ LR I K+ D +
Sbjct: 1 MLPLYLLTNAKGQQMRVELKSGEIIEGELTNVDNWMNLTLRN-ISEYKNTDGSPQLEVVK 59
Query: 56 MPECYIRGNTIKYLRVPDEVIDKVQEETKS 85
E Y++G IKY+++ D++I+ V+++ S
Sbjct: 60 SSEIYLKGIYIKYIKLQDDIINNVKQQINS 89
>gi|145510436|ref|XP_001441151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408390|emb|CAK73754.1| unnamed protein product [Paramecium tetraurelia]
Length = 128
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ PLSLL TA+G +++E+K G+TY+G L D +MN+ L V TSKDG+ F + E
Sbjct: 4 IFPLSLLLTAKGSDVVIEVKAGDTYDGKLELLDKFMNVKLTNVKHTSKDGNSFHGIKELL 63
Query: 61 IRGNTIKYLRV-PD 73
I+GN+IKY R+ PD
Sbjct: 64 IKGNSIKYFRLNPD 77
>gi|145549786|ref|XP_001460572.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428402|emb|CAK93175.1| unnamed protein product [Paramecium tetraurelia]
Length = 128
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ PLSLL TA+G +++E+K G+TY+G L D +MN L V TSKDG+ F + E
Sbjct: 4 IFPLSLLLTAKGSDVVIEVKAGDTYDGKLELLDKFMNAKLTNVKHTSKDGNSFHGIKELL 63
Query: 61 IRGNTIKYLRV-PD 73
I+GN+IKY R+ PD
Sbjct: 64 IKGNSIKYFRLNPD 77
>gi|58264244|ref|XP_569278.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107716|ref|XP_777469.1| hypothetical protein CNBB0430 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321248376|ref|XP_003191109.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|50260161|gb|EAL22822.1| hypothetical protein CNBB0430 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223928|gb|AAW41971.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317457576|gb|ADV19322.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
gi|405118776|gb|AFR93550.1| pre-mRNA splicing factor [Cryptococcus neoformans var. grubii H99]
Length = 124
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK GE Y G L+ + +NI LRE+ T++DG R ++ + YI
Sbjct: 6 VPVKLLHESLGHIITVELKTGEMYRGKLMEAEDTLNIALREITVTARDG-RVSQLEQVYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ I+++ VPD + + + + G+G RGR A+ R+
Sbjct: 65 RGSMIRFIIVPDLLAQAPMFKRIGPNAMRGRGIGAARGRATIQRANARR 113
>gi|198436641|ref|XP_002128163.1| PREDICTED: similar to GL19160 isoform 2 [Ciona intestinalis]
Length = 80
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 35/38 (92%)
Query: 49 DGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR 86
DGD FWRMPECYIRG+TIKYLR+PDEVID V+E++ S+
Sbjct: 2 DGDHFWRMPECYIRGSTIKYLRIPDEVIDMVKEDSMSK 39
>gi|340904841|gb|EGS17209.1| small nuclear ribonucleoprotein smD3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 114
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLELTTGQTYRGKLIEAEDNMNVQLKDITVTARDG-RVSHLEQIYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDR-KPPGVGRGRGRGREDGASGR 109
RG+ +++ VPD + + +SR+ R + G+ RGR ASGR
Sbjct: 66 RGSHVRFFIVPDML--RNAPMFRSRNVRGRGVGLARGRATVSRARASGR 112
>gi|367037323|ref|XP_003649042.1| hypothetical protein THITE_57872, partial [Thielavia terrestris
NRRL 8126]
gi|346996303|gb|AEO62706.1| hypothetical protein THITE_57872, partial [Thielavia terrestris
NRRL 8126]
Length = 114
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDR-KPPGVGRGRGRGREDGASGR 109
RG+ +++ VPD + + +SR+ R + G+ RGR ASGR
Sbjct: 66 RGSHVRFFIVPDML--RNAPMFRSRNVRGRGVGLARGRATVSRARASGR 112
>gi|389644246|ref|XP_003719755.1| small nuclear ribonucleoprotein Sm D3 [Magnaporthe oryzae 70-15]
gi|351639524|gb|EHA47388.1| small nuclear ribonucleoprotein Sm D3 [Magnaporthe oryzae 70-15]
gi|440466514|gb|ELQ35778.1| small nuclear ribonucleoprotein Sm D3 [Magnaporthe oryzae Y34]
gi|440477082|gb|ELQ58226.1| small nuclear ribonucleoprotein Sm D3 [Magnaporthe oryzae P131]
Length = 119
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ G+TY G L++ + MNI LR++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIITLEITTGQTYRGKLIDAEDNMNIQLRDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGA 106
RG+ +++ VPD + + +++ R GVG RGR + A
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRATVNRA 107
>gi|414876857|tpg|DAA53988.1| TPA: hypothetical protein ZEAMMB73_426325, partial [Zea mays]
Length = 113
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 53/63 (84%), Gaps = 3/63 (4%)
Query: 56 MPECYIRGNTIKYLRVPDEVIDKVQEET-KSRSDRKPPGVGRGRGRGREDGASGRQTKGI 114
MPECYIRGNTIKYLRVPDEVIDKVQEET KSRSDRKPPGVGRGRGRG G +GI
Sbjct: 1 MPECYIRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPGVGRGRGRGDVGAKPG--GRGI 58
Query: 115 GRG 117
GRG
Sbjct: 59 GRG 61
>gi|402079014|gb|EJT74279.1| small nuclear ribonucleoprotein Sm D3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 130
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ G+TY G L+ + MNI LR++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIITLEITTGQTYRGKLIEAEDNMNIQLRDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGA 106
RG+ +++ VPD + + +++ R GVG RGR + A
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRATVNRA 107
>gi|402224280|gb|EJU04343.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 127
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+TY G L + + +NI LR++ T +DG R ++ YI
Sbjct: 7 VPIKLLHESLGHVITVELKTGQTYRGKLADAEDSLNISLRDITVTGRDG-RVSQLDSVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKG 113
RG+ +++ VPD + + + + K G+G RGR A+ R+ +G
Sbjct: 66 RGSMVRFFIVPDMLQNAPMFKRVGPNAMKGRGIGTARGRATIMRANARRGRG 117
>gi|171693559|ref|XP_001911704.1| hypothetical protein [Podospora anserina S mat+]
gi|170946728|emb|CAP73532.1| unnamed protein product [Podospora anserina S mat+]
Length = 118
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRG 117
RG+ +++ VPD + + +SR+ R G G G RGR + R + G RG
Sbjct: 66 RGSHVRFFIVPDML--RNAPMFRSRNVR---GRGVGLARGRATVSRARASGGPPRG 116
>gi|310799322|gb|EFQ34215.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 115
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDR-KPPGVGRGRGRGREDGASGR 109
RG+ +++ VPD + + +SR+ R + G+ RGR ASGR
Sbjct: 66 RGSHVRFFIVPDML--RNAPMFRSRNVRGRGVGMARGRATVSRARASGR 112
>gi|444726630|gb|ELW67154.1| hypothetical protein TREES_T100014725 [Tupaia chinensis]
Length = 1488
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 36/39 (92%)
Query: 48 KDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR 86
+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE ++
Sbjct: 161 EDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAK 199
>gi|366991799|ref|XP_003675665.1| hypothetical protein NCAS_0C03090 [Naumovozyma castellii CBS
4309]
gi|342301530|emb|CCC69299.1| hypothetical protein NCAS_0C03090 [Naumovozyma castellii CBS
4309]
Length = 102
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL GETY G L+ + MN+ LR+V+ T D + RM ++
Sbjct: 6 IPVKLLNEAQGHIVSIELTTGETYRGKLIESEDNMNVQLRDVVVTQTDS-KITRMDHVFV 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
RG+ IK+ VPD + + +T +S PP
Sbjct: 65 RGSHIKFFVVPDMLKNAPLFKTGPQSRPTPP 95
>gi|119174174|ref|XP_001239448.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|258569991|ref|XP_002543799.1| small nuclear ribonucleoprotein SM D3 [Uncinocarpus reesii 1704]
gi|303314089|ref|XP_003067053.1| small nuclear ribonucleoprotein Sm D3, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|237904069|gb|EEP78470.1| small nuclear ribonucleoprotein SM D3 [Uncinocarpus reesii 1704]
gi|240106721|gb|EER24908.1| small nuclear ribonucleoprotein Sm D3, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320037285|gb|EFW19222.1| small nuclear ribonucleoprotein Sm D3 [Coccidioides posadasii str.
Silveira]
gi|392869636|gb|EAS28151.2| small nuclear ribonucleoprotein Sm D3 [Coccidioides immitis RS]
Length = 116
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +++ VPD + + T+ + R GVG RGR + A G++
Sbjct: 69 RGSHVRFFIVPDMLRNAPMFRTRGQRGR---GVGLARGRATVNRARGQR 114
>gi|336269505|ref|XP_003349513.1| hypothetical protein SMAC_03101 [Sordaria macrospora k-hell]
gi|380093412|emb|CCC09070.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 116
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 102
>gi|367024463|ref|XP_003661516.1| hypothetical protein MYCTH_2301009 [Myceliophthora thermophila ATCC
42464]
gi|347008784|gb|AEO56271.1| hypothetical protein MYCTH_2301009 [Myceliophthora thermophila ATCC
42464]
Length = 114
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 102
>gi|392569479|gb|EIW62652.1| small nuclear ribonucleo protein Sm D3 [Trametes versicolor
FP-101664 SS1]
Length = 131
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 8 IPVKLLHESLGHVITVELKTGQLYRGKLAEAEDNLNISLKDITVTQRDG-RVSQLDQVYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ +++ VPD + + R P +GRG G A GR T I R L
Sbjct: 67 RGSMVRFFIVPDML------QNAPMFKRVGPNAMKGRGIG---TARGRAT--IMRALTIF 115
Query: 122 GAKGAGGGRGRGGPGGK 138
A+ RGRG P +
Sbjct: 116 AAR-----RGRGVPAAR 127
>gi|268534544|ref|XP_002632403.1| C. briggsae CBR-SNR-1 protein [Caenorhabditis briggsae]
Length = 136
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E GE Y G L+ + MN L E I T +DG R ++ +I
Sbjct: 6 VPIKILHEAEGHTVTLETVTGEVYRGKLIEAEDNMNCQLSETIVTFRDG-RSHQLENVFI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RGN I+++ +PD + + + R+ + G+G G G +G GRG
Sbjct: 65 RGNKIRFMILPDMLKNAPMFKNIGRAQKGAIGMGLG----------GLDQRGRGRGTAFR 114
Query: 122 GAKGAGGGRGRGGPGGKP 139
G GG RG PGG P
Sbjct: 115 RPMGRGGPRGMSRPGGAP 132
>gi|341886102|gb|EGT42037.1| CBN-SNR-1 protein [Caenorhabditis brenneri]
Length = 136
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E GE Y G L+ + MN L E I T +DG R ++ +I
Sbjct: 6 VPIKILHEAEGHTVTLETVTGEVYRGKLIEAEDNMNCQLAETIVTFRDG-RSHQLENVFI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RGN I+++ +PD + + + R+ + G+G G G +G GRG
Sbjct: 65 RGNKIRFMILPDMLKNAPMFKNIGRAQKGAIGMGLG----------GLDQRGRGRGTAFR 114
Query: 122 GAKGAGGGRGRGGPGGKP 139
G GG RG PGG P
Sbjct: 115 RPMGRGGPRGMSRPGGAP 132
>gi|322694233|gb|EFY86068.1| small nuclear ribonucleoprotein Sm D3 [Metarhizium acridum CQMa
102]
Length = 113
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L++ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLLDAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNLRGR---GVGLARGRA 102
>gi|449546694|gb|EMD37663.1| hypothetical protein CERSUDRAFT_123559 [Ceriporiopsis subvermispora
B]
Length = 127
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+E+ T +DG R ++ + YI
Sbjct: 8 VPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKEITVTQRDG-RVSQLDQVYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGI 114
RG+ +++ VPD + + + + K G+G RGR A+ R+ +G+
Sbjct: 67 RGSMVRFFIVPDMLQNAPMFKRVGPNAMKGRGIGTARGRATIMRANARRGRGV 119
>gi|395333040|gb|EJF65418.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 128
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 20/137 (14%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 8 VPVKLLHESLGHVITVELKTGQLYRGKLAEAEDNLNISLKDITVTQRDG-RVSQLDQVYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ +++ VPD + + R P RGRG G A GR T
Sbjct: 67 RGSMVRFFIVPDML------QNAPMFKRVGPNAMRGRGIG---TARGRATI--------- 108
Query: 122 GAKGAGGGRGRGGPGGK 138
+GA RGRG P +
Sbjct: 109 -MRGASSRRGRGVPAAR 124
>gi|225714524|gb|ACO13108.1| Small nuclear ribonucleoprotein Sm D3 [Lepeophtheirus salmonis]
gi|290462385|gb|ADD24240.1| Small nuclear ribonucleoprotein Sm D3 [Lepeophtheirus salmonis]
gi|290563060|gb|ADD38924.1| Small nuclear ribonucleoprotein Sm D3 [Lepeophtheirus salmonis]
Length = 138
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 21/148 (14%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E NGE Y G L+ + MN + V T +DG ++ YI
Sbjct: 5 VPIKVLHEAEGHIVTCETINGEVYRGRLIEAEDNMNCQMSSVSVTHRDGH-VSQLENIYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ I+++ +PD + + P GRGRG ++GR I R
Sbjct: 64 RGSKIRFMILPDMLKN------------APMFKNMGRGRGSAPASAGRGKSAILR----- 106
Query: 122 GAKGAGGGRGRGGPGGKPGGSRGG-GRS 148
+ A GRGR GP G PG + G GRS
Sbjct: 107 --EQAARGRGRAGPPGLPGSAASGRGRS 132
>gi|296810002|ref|XP_002845339.1| small nuclear ribonucleoprotein SM D3 [Arthroderma otae CBS 113480]
gi|238842727|gb|EEQ32389.1| small nuclear ribonucleoprotein SM D3 [Arthroderma otae CBS 113480]
Length = 116
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVITLEITSGHVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +K+ VPD + + ++ + R GVG RGR + A G++
Sbjct: 69 RGSHVKFFIVPDMLRNAPMFRSRGQRGR---GVGLARGRATVNRARGQR 114
>gi|340519305|gb|EGR49544.1| predicted protein [Trichoderma reesei QM6a]
gi|358388432|gb|EHK26025.1| hypothetical protein TRIVIDRAFT_27430, partial [Trichoderma virens
Gv29-8]
gi|358392460|gb|EHK41864.1| hypothetical protein TRIATDRAFT_134655, partial [Trichoderma
atroviride IMI 206040]
Length = 114
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIITLEITSGQTYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 102
>gi|315044655|ref|XP_003171703.1| small nuclear ribonucleoprotein SM D3 [Arthroderma gypseum CBS
118893]
gi|327297404|ref|XP_003233396.1| small nuclear ribonucleoprotein Sm D3 [Trichophyton rubrum CBS
118892]
gi|311344046|gb|EFR03249.1| small nuclear ribonucleoprotein SM D3 [Arthroderma gypseum CBS
118893]
gi|326464702|gb|EGD90155.1| small nuclear ribonucleoprotein Sm D3 [Trichophyton rubrum CBS
118892]
gi|326472436|gb|EGD96445.1| pre-mRNA splicing factor [Trichophyton tonsurans CBS 112818]
gi|326481659|gb|EGE05669.1| small nuclear ribonucleoprotein D3 polypeptide [Trichophyton
equinum CBS 127.97]
Length = 116
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGHVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +K+ VPD + + ++ + R GVG RGR + A G++
Sbjct: 69 RGSHVKFFIVPDMLRNAPMFRSRGQRGR---GVGLARGRATVNRARGQR 114
>gi|169614183|ref|XP_001800508.1| hypothetical protein SNOG_10228 [Phaeosphaeria nodorum SN15]
gi|160707292|gb|EAT82563.2| hypothetical protein SNOG_10228 [Phaeosphaeria nodorum SN15]
Length = 117
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + +E+ +GE Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAAGHIITLEITSGEVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRG 117
RG+ ++Y VPD + + ++ R GVG RGR + A T+G GRG
Sbjct: 66 RGSHVRYFIVPDMLRNAPMFRSRGTRGR---GVGLARGRATVNRARA-STRGGGRG 117
>gi|410082351|ref|XP_003958754.1| hypothetical protein KAFR_0H02100 [Kazachstania africana CBS 2517]
gi|372465343|emb|CCF59619.1| hypothetical protein KAFR_0H02100 [Kazachstania africana CBS 2517]
Length = 102
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL +QGH + +EL NG+TY G L+ + MN+ LR+ I T+ ++ +M +I
Sbjct: 5 IPIKLLNESQGHIISLELNNGDTYRGKLLTNEDNMNLQLRDTIVTNAQTNKQTKMDHVFI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGR 98
RG+ IK+L +PD + + +T S + PP G R
Sbjct: 65 RGSQIKFLSLPDMLKNAPLFKTGKASKQPPPIRGPKR 101
>gi|347841024|emb|CCD55596.1| hypothetical protein [Botryotinia fuckeliana]
Length = 117
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHVVTLEITTGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDR-KPPGVGRGRGRGREDGASGR 109
RG+ +++ VPD + + +SR+ R + G+ RGR ASGR
Sbjct: 66 RGSHVRFFIVPDML--RNAPMFRSRNTRGRGVGLARGRATVSRARASGR 112
>gi|212538165|ref|XP_002149238.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
marneffei ATCC 18224]
gi|242807429|ref|XP_002484954.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
stipitatus ATCC 10500]
gi|210068980|gb|EEA23071.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
marneffei ATCC 18224]
gi|218715579|gb|EED15001.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
stipitatus ATCC 10500]
Length = 116
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +++ VPD + + T+ + R GVG RG+ + A G++
Sbjct: 69 RGSHVRFFIVPDMLRNAPMFRTRGQRGR---GVGLARGKATVNRARGQR 114
>gi|403214951|emb|CCK69451.1| hypothetical protein KNAG_0C03440 [Kazachstania naganishii CBS
8797]
Length = 186
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREV----------ICTSKDG 50
MLPL LL A+G M +ELKNGE G L N D WMN+ L V I K
Sbjct: 1 MLPLYLLTNAKGQRMSIELKNGEIIEGELNNVDNWMNLTLINVTEHKTRDFGEISAGKQV 60
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKS 85
+ ++ E Y++G IKY+R+ D++ID ++++ S
Sbjct: 61 EMI-KLQEIYLKGIYIKYIRLQDDIIDNLRQKINS 94
>gi|295658451|ref|XP_002789786.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|225682914|gb|EEH21198.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226282930|gb|EEH38496.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226290365|gb|EEH45849.1| small nuclear ribonucleoprotein Sm D3 [Paracoccidioides
brasiliensis Pb18]
gi|327350126|gb|EGE78983.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces dermatitidis
ATCC 18188]
Length = 116
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +++ VPD + + ++ + R GVG RGR + A G++
Sbjct: 69 RGSHVRFFIVPDMLRNAPMFRSRGQRGR---GVGLARGRATVNRARGQR 114
>gi|154342983|ref|XP_001567437.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064769|emb|CAM42875.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 116
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ P+ +L+ +G + +EL +GET NG ++ D MN+ +++ T DG+ FW+ EC+
Sbjct: 8 ITPIEILRNCRGKEVSIELSDGETVNGTVMRTDRAMNVVIKQCTRTGADGESFWKSRECF 67
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
IRG ++K +R+ D + V K RK G +G +E A+GR+
Sbjct: 68 IRGASVKNVRMTDSALVSVPVPAK----RKAAG-NKGADAHKEKFAAGRK 112
>gi|255948872|ref|XP_002565203.1| Pc22g12590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592220|emb|CAP98547.1| Pc22g12590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425774880|gb|EKV13173.1| Small nuclear ribonucleoprotein SmD3, putative [Penicillium
digitatum PHI26]
gi|425780976|gb|EKV18959.1| Small nuclear ribonucleoprotein SmD3, putative [Penicillium
digitatum Pd1]
Length = 117
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTIEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKG 113
RG+ +++ VPD + + T+ + R GVG RG+ A G++ +G
Sbjct: 69 RGSHVRFFIVPDMLRNAPMFRTRGQRGR---GVGLARGKATVQRARGQRGRG 117
>gi|154299390|ref|XP_001550114.1| hypothetical protein BC1G_10957 [Botryotinia fuckeliana B05.10]
Length = 117
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHVVTLEITTGQVYRGKLLGAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDR-KPPGVGRGRGRGREDGASGR 109
RG+ +++ VPD + + +SR+ R + G+ RGR ASGR
Sbjct: 66 RGSHVRFFIVPDML--RNAPMFRSRNTRGRGVGLARGRATVSRARASGR 112
>gi|345560308|gb|EGX43433.1| hypothetical protein AOL_s00215g169 [Arthrobotrys oligospora ATCC
24927]
Length = 123
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL LL +QGH + +EL +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 6 IPLKLLGESQGHVVTLELTSGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +++ VPD + + +++ R GVG RGR + A +Q
Sbjct: 65 RGSHVRFFIVPDMLRNAPMFRSRAVRGR---GVGMARGRATVNRAKTQQ 110
>gi|389741899|gb|EIM83087.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 126
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+E+ T +DG R ++ + YI
Sbjct: 7 VPVKLLHESLGHVITVELKTGQLYRGKLAEAEDNLNISLKEITVTGRDG-RISQLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGI 114
RG+ +++ VPD + + + + + G+G RGR A+ R+ +G+
Sbjct: 66 RGSMVRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRANARRGRGV 118
>gi|50294275|ref|XP_449549.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528863|emb|CAG62525.1| unnamed protein product [Candida glabrata]
Length = 99
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL NG+TY G LV + MN+ LR+V+ TS + RM ++
Sbjct: 4 IPVKLLSEAQGHVVTIELNNGDTYRGKLVESEDNMNVQLRDVMVTSS-TQKLSRMDHVFV 62
Query: 62 RGNTIKYLRVPD 73
RG+ I++ VPD
Sbjct: 63 RGSHIRFFVVPD 74
>gi|302410425|ref|XP_003003046.1| small nuclear ribonucleoprotein Sm D3 [Verticillium albo-atrum
VaMs.102]
gi|261358070|gb|EEY20498.1| small nuclear ribonucleoprotein Sm D3 [Verticillium albo-atrum
VaMs.102]
Length = 154
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MNI L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIITLEITSGQTYRGKLLEAEDNMNIQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + ++++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNQRGR---GVGLARGRA 102
>gi|116206378|ref|XP_001228998.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183079|gb|EAQ90547.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 115
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 102
>gi|85102544|ref|XP_961352.1| small nuclear ribonucleoprotein Sm D3 [Neurospora crassa OR74A]
gi|12718393|emb|CAC28701.1| probable small nuclear ribonucleoprotein SM D3 [Neurospora crassa]
gi|28922896|gb|EAA32116.1| small nuclear ribonucleoprotein Sm D3 [Neurospora crassa OR74A]
Length = 116
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLIEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 102
>gi|154286938|ref|XP_001544264.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407905|gb|EDN03446.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|225555382|gb|EEH03674.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces capsulatus
G186AR]
gi|240273870|gb|EER37389.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325094696|gb|EGC48006.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces capsulatus H88]
Length = 116
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEILSGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +++ VPD + + ++ + R GVG RGR + A G++
Sbjct: 69 RGSHVRFFIVPDMLRNAPMFRSRGQRGR---GVGLARGRATVNRARGQR 114
>gi|392594010|gb|EIW83335.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 125
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T++DG R ++ + YI
Sbjct: 6 VPVKLLHESLGHVITVELKTGQLYRGKLAEAEDNLNISLKDITVTARDG-RVSQLDQVYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGI 114
RG+ I++ VPD + + + + + G+G RGR A+ R+ +G+
Sbjct: 65 RGSMIRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRANARRGRGV 117
>gi|402466238|gb|EJW01770.1| hypothetical protein EDEG_00361 [Edhazardia aedis USNM 41457]
Length = 121
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTS-----KDGDRFWR 55
M PL+L++ ++G ++VELKN + Y G L CD MN+ L+ V T K+G
Sbjct: 1 MYPLTLIRISKGKKVVVELKNNDVYEGLLKGCDLSMNLFLKNVSVTKTFLQCKEGFEPEY 60
Query: 56 MPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKG 113
+ ECY++G+ IK++R+ +EV++ +S + K G+ R + A+ R +
Sbjct: 61 LQECYLKGSVIKHIRLHNEVLN-----VQSNLETKGKDFTNGKNSSRRNSANMRNIQA 113
>gi|378726753|gb|EHY53212.1| small nuclear ribonucleoprotein D3 [Exophiala dermatitidis
NIH/UT8656]
Length = 116
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLELTSGQVYRGKLLEAEDNMNVQLKDITATARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGA 106
RG+ +++ VPD + + T+ R GVG RGR + A
Sbjct: 69 RGSHVRFFIVPDMLRNAPMFRTRGIRGR---GVGLARGRATVNRA 110
>gi|255718497|ref|XP_002555529.1| KLTH0G11396p [Lachancea thermotolerans]
gi|238936913|emb|CAR25092.1| KLTH0G11396p [Lachancea thermotolerans CBS 6340]
Length = 102
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL +QGH + +EL GE Y G LV+ + MN+ LR+V T++DG RM ++
Sbjct: 6 IPIKLLTESQGHVVSLELTTGEAYRGKLVDSEDNMNVQLRDVTATARDGS-VTRMDHVFV 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR 100
RG+ I++ VPD I K K KPP RG R
Sbjct: 65 RGSHIRFFVVPD--ILKNAPMFKQGPTSKPPPPIRGPKR 101
>gi|294933185|ref|XP_002780640.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
gi|239890574|gb|EER12435.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
Length = 120
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VE++ GE Y GHL++ + MN+ + EV+ T KDG + + + YI
Sbjct: 6 IPIKLLHESVGHTVTVEMQTGELYRGHLIHTEDNMNLLIAEVVVTRKDGKQT-SLEQAYI 64
Query: 62 RGNTIKYLRVPDEV 75
RG+ I+Y+ VPD +
Sbjct: 65 RGSKIRYIVVPDNL 78
>gi|189199034|ref|XP_001935854.1| small nuclear ribonucleoprotein Sm D3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330913493|ref|XP_003296291.1| hypothetical protein PTT_05811 [Pyrenophora teres f. teres 0-1]
gi|187982953|gb|EDU48441.1| small nuclear ribonucleoprotein Sm D3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311331686|gb|EFQ95612.1| hypothetical protein PTT_05811 [Pyrenophora teres f. teres 0-1]
Length = 118
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + +E+ +GE Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAAGHIVTLEITSGEVYRGKLIEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++Y VPD + + ++ R GVG RGR
Sbjct: 66 RGSHVRYFIVPDMLRNAPMFRSRGTRGR---GVGLARGRA 102
>gi|342888751|gb|EGU87970.1| hypothetical protein FOXB_01453 [Fusarium oxysporum Fo5176]
gi|408397687|gb|EKJ76827.1| hypothetical protein FPSE_03013 [Fusarium pseudograminearum CS3096]
Length = 115
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L++ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLLDAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 102
>gi|392577030|gb|EIW70160.1| hypothetical protein TREMEDRAFT_38820 [Tremella mesenterica DSM
1558]
Length = 124
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK GE Y G L+ + +NI L+++ T++DG R +M YI
Sbjct: 6 VPVKLLHESLGHVVTVELKTGEMYRGKLMEAEDNLNIALKDITVTARDG-RVSQMDMVYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQT 111
RG+ I+++ VPD + + R P RGRG G A GR T
Sbjct: 65 RGSMIRFVIVPDLL------SSAPMFKRVGPNAMRGRGIG---AARGRAT 105
>gi|403373657|gb|EJY86747.1| Small nuclear ribonucleoprotein [Oxytricha trifallax]
Length = 692
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+ H + VELK+GE Y G+L+ + MN+ L +V T KDG R + + + ++
Sbjct: 5 VPIKLLHEAENHVITVELKSGELYRGYLMEAEDTMNMRLDDVYVTGKDG-RQYHLDQVFV 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGV----GRGRGRGRED 104
RG+ ++++ +PD + + + + +K GRGRG ED
Sbjct: 64 RGSQVRFIIIPDMLKNSPMFKRIANQAKKGKNALLAKGRGRGIAEED 110
>gi|400601331|gb|EJP68974.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 115
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIITLEITSGQTYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + + S+ + GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRS---SNLRGRGVGMARGRA 102
>gi|451851728|gb|EMD65026.1| hypothetical protein COCSADRAFT_36375 [Cochliobolus sativus ND90Pr]
gi|451995470|gb|EMD87938.1| hypothetical protein COCHEDRAFT_1183070 [Cochliobolus
heterostrophus C5]
Length = 116
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + +E+ +GE Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAAGHIVTLEITSGEVYRGKLIEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGR 116
RG+ ++Y VPD + + ++ R GVG RGR + A T+G GR
Sbjct: 66 RGSHVRYFIVPDMLRNAPMFRSRGTRGR---GVGLARGRATVNRARA-STRGGGR 116
>gi|393244822|gb|EJD52333.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 126
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK G+ Y G L+ + +NI L+++ T +DG R ++ + YI
Sbjct: 7 VPVKLLHEAMGHIITVELKTGQLYRGKLLEAEDSLNISLKDITVTGRDG-RVSQLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQT 111
RG+ I++ VPD + + R P RGRG G A GR T
Sbjct: 66 RGSMIRFFIVPDML------QNAPMFKRVGPNAMRGRGIG---TARGRAT 106
>gi|239613701|gb|EEQ90688.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces dermatitidis
ER-3]
Length = 123
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEV---IDKVQEETKSRSD-RKPPGVGRGRGRGREDGASGRQ 110
RG+ +++ VPD + I+ RS ++ GVG RGR + A G++
Sbjct: 69 RGSHVRFFIVPDMLRYGINITPNAPMFRSRGQRGRGVGLARGRATVNRARGQR 121
>gi|320589183|gb|EFX01645.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 116
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGRLLEAEDNMNVQLKDITVTARDG-RVSHLEQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 102
>gi|302909812|ref|XP_003050156.1| hypothetical protein NECHADRAFT_84991 [Nectria haematococca mpVI
77-13-4]
gi|256731093|gb|EEU44443.1| hypothetical protein NECHADRAFT_84991 [Nectria haematococca mpVI
77-13-4]
Length = 384
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L++ + MN+ L+++ T++DG R + + YI
Sbjct: 277 IPIKLLNEAQGHIVTLEITSGQTYRGKLLDAEDNMNVQLKDITVTARDG-RVSHLDQVYI 335
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 336 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 372
>gi|403412007|emb|CCL98707.1| predicted protein [Fibroporia radiculosa]
Length = 127
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 8 IPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG-RVSQLDQVYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGI 114
RG+ I++ VPD + + + + + G+G RGR A+ R+ +G+
Sbjct: 67 RGSMIRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRANARRGRGV 119
>gi|46123175|ref|XP_386141.1| hypothetical protein FG05965.1 [Gibberella zeae PH-1]
Length = 365
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L++ + MN+ L+++ T++DG R + + YI
Sbjct: 257 IPIKLLNEAQGHIVTLEITSGQTYRGKLLDAEDNMNVQLKDITVTARDG-RVSHLDQVYI 315
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + +++ R GVG RGR
Sbjct: 316 RGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 352
>gi|388579924|gb|EIM20243.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 123
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ L+ + GH + +ELK+G+ Y G L + +N+ L+++ T++DG R ++ + YI
Sbjct: 4 VPIKLVHESLGHVVTIELKSGQMYRGKLQEAEDNLNVSLQDITVTARDG-RVSQLDQVYI 62
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKG 113
RG+ IK+L VPD + + + + K G+G RGR A+ R+ +G
Sbjct: 63 RGSMIKFLVVPDMLQNAPMFKRVGPNAMKGRGIGTARGRATIMRANARRGRG 114
>gi|440634941|gb|ELR04860.1| small nuclear ribonucleoprotein D3 [Geomyces destructans 20631-21]
Length = 117
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ VPD + + ++ R GVG RGR
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRGVKGR---GVGLARGRA 102
>gi|384497430|gb|EIE87921.1| hypothetical protein RO3G_12632 [Rhizopus delemar RA 99-880]
Length = 129
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +ELK G+ Y G L+ + MNI L+++ T++DG R ++ + YI
Sbjct: 5 VPIKLLHEAQGHIISLELKTGQLYRGKLLEAEDNMNIQLKDITVTARDG-RVSQLDQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ +++ VPD
Sbjct: 64 RGSHVRFFIVPD 75
>gi|294874372|ref|XP_002766923.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
gi|294881753|ref|XP_002769480.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
gi|239868298|gb|EEQ99640.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
gi|239872939|gb|EER02198.1| Small nuclear ribonucleoprotein Sm D3, putative [Perkinsus
marinus ATCC 50983]
Length = 119
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VE++ GE Y GHL++ + MN+ + EV+ T +DG + + + YI
Sbjct: 6 IPIKLLHESVGHTVTVEMQTGELYRGHLIHTEDNMNLLIAEVVVTRRDGKQT-SLEQAYI 64
Query: 62 RGNTIKYLRVPDEV 75
RG+ I+Y+ VPD +
Sbjct: 65 RGSKIRYIVVPDNL 78
>gi|254567285|ref|XP_002490753.1| Core Sm protein Sm D3 [Komagataella pastoris GS115]
gi|238030549|emb|CAY68473.1| Core Sm protein Sm D3 [Komagataella pastoris GS115]
Length = 100
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + EL +GE+Y G LV + MNI L++V T++DG + M + +I
Sbjct: 5 IPVKLLNEAQGHIISAELTSGESYRGKLVESEDSMNIQLKDVTLTAQDG-KVSHMEQIFI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++ VP+
Sbjct: 64 RGSQIRFFSVPE 75
>gi|444323153|ref|XP_004182217.1| hypothetical protein TBLA_0I00350 [Tetrapisispora blattae CBS
6284]
gi|387515264|emb|CCH62698.1| hypothetical protein TBLA_0I00350 [Tetrapisispora blattae CBS
6284]
Length = 196
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP--- 57
MLPL LL +G M +ELKNGE G L N D WMN+ L V + +G F P
Sbjct: 1 MLPLYLLTNVKGQKMTIELKNGEVVEGELTNVDNWMNLTLTNV--SQHNGSDFISGPQVE 58
Query: 58 -----ECYIRGNTIKYLRVPDEVIDKVQEE 82
E Y+RG IKY+ + ++ID+V+ +
Sbjct: 59 VVKSKEIYLRGTYIKYISLQKDIIDQVKTQ 88
>gi|326428962|gb|EGD74532.1| small nuclear ribonucleoprotein Sm D3 [Salpingoeca sp. ATCC
50818]
Length = 128
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ L+ A+GH + +ELKNGE Y G L+ + MN +R+V T++DG + ++ YI
Sbjct: 6 VPVKLMHEAEGHTITIELKNGEMYRGKLIEAEDNMNSQMRDVTFTARDG-QVTQLDTVYI 64
Query: 62 RGNTIKYLRVPD 73
RG+ IK+ +PD
Sbjct: 65 RGSKIKFFVLPD 76
>gi|67523101|ref|XP_659611.1| hypothetical protein AN2007.2 [Aspergillus nidulans FGSC A4]
gi|40745683|gb|EAA64839.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259487374|tpe|CBF86001.1| TPA: small nuclear ribonucleoprotein SmD3, putative
(AFU_orthologue; AFUA_4G10240) [Aspergillus nidulans
FGSC A4]
Length = 116
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +++ VPD + + T+ + R GVG RG+ A G++
Sbjct: 69 RGSHVRFFIVPDMLRNAPMFRTRGQRGR---GVGLARGKATVQRARGQR 114
>gi|156848641|ref|XP_001647202.1| hypothetical protein Kpol_1036p91 [Vanderwaltozyma polyspora DSM
70294]
gi|156117886|gb|EDO19344.1| hypothetical protein Kpol_1036p91 [Vanderwaltozyma polyspora DSM
70294]
Length = 100
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL LL AQGH + +EL GETY G LV+ + MN+ L++V T D + RM ++
Sbjct: 4 IPLKLLSEAQGHVVTLELSTGETYRGKLVDSEDNMNVQLQDVTVTGVDS-KVSRMDHVFV 62
Query: 62 RGNTIKYLRVPD 73
RG+ IK+ VPD
Sbjct: 63 RGSHIKFFVVPD 74
>gi|302679434|ref|XP_003029399.1| hypothetical protein SCHCODRAFT_16877 [Schizophyllum commune H4-8]
gi|300103089|gb|EFI94496.1| hypothetical protein SCHCODRAFT_16877 [Schizophyllum commune H4-8]
Length = 125
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+E+ T +DG R ++ + YI
Sbjct: 7 VPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKEITVTGRDG-RVSQLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++ VPD + + + + K G+G RGR
Sbjct: 66 RGSMIRFFIVPDMLQNAPMFKRVGPNAMKGRGIGTARGRA 105
>gi|336363219|gb|EGN91635.1| hypothetical protein SERLA73DRAFT_192176 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384161|gb|EGO25309.1| hypothetical protein SERLADRAFT_465253 [Serpula lacrymans var.
lacrymans S7.9]
Length = 127
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 8 VPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG-RVSQLDQVYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGI 114
RG+ +++ VPD + + + + + G+G RGR A+ R+ +G+
Sbjct: 67 RGSMVRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRANARRGRGV 119
>gi|164661203|ref|XP_001731724.1| hypothetical protein MGL_0992 [Malassezia globosa CBS 7966]
gi|159105625|gb|EDP44510.1| hypothetical protein MGL_0992 [Malassezia globosa CBS 7966]
Length = 126
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL GH + +ELK G TY G L + + NI ++++ T++DG + + YI
Sbjct: 6 IPVKLLHEGLGHTVTIELKGGATYRGRLFDAEDNFNISMKDIAVTARDGKQ-THLDSVYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKG 113
RGN I+++ VPD + + + K G+G RGR A R+ +G
Sbjct: 65 RGNMIRFMVVPDMLQQAPMFKRVGPNAMKGRGIGSARGRATIMRAQARRGRG 116
>gi|70993910|ref|XP_751802.1| small nuclear ribonucleoprotein SmD3 [Aspergillus fumigatus Af293]
gi|119500466|ref|XP_001266990.1| small nuclear ribonucleoprotein SmD3, putative [Neosartorya
fischeri NRRL 181]
gi|145258404|ref|XP_001402031.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus niger CBS
513.88]
gi|66849436|gb|EAL89764.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
fumigatus Af293]
gi|119415155|gb|EAW25093.1| small nuclear ribonucleoprotein SmD3, putative [Neosartorya
fischeri NRRL 181]
gi|134074637|emb|CAK44670.1| unnamed protein product [Aspergillus niger]
gi|159125281|gb|EDP50398.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
fumigatus A1163]
gi|350632459|gb|EHA20827.1| hypothetical protein ASPNIDRAFT_204683 [Aspergillus niger ATCC
1015]
gi|358370798|dbj|GAA87408.1| small nuclear ribonucleoprotein SmD3 [Aspergillus kawachii IFO
4308]
Length = 116
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +K+ VPD + + ++ + R GVG RG+ A G++
Sbjct: 69 RGSHVKFFIVPDMLRNAPMFRSRGQRGR---GVGLARGKATVQRARGQR 114
>gi|393217444|gb|EJD02933.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 126
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 7 VPVKLLHESLGHVITVELKTGQLYRGKLAEAEDSLNISLKDITVTGRDG-RVSQLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ +++ VPD + + R P RGRG G A GR T I R
Sbjct: 66 RGSMVRFFIVPDML------QNAPMFKRVGPNAMRGRGIG---TARGRAT--IMR----- 109
Query: 122 GAKGAGGGRGRGGPGGK 138
A RGRG P +
Sbjct: 110 ----ANARRGRGQPAAR 122
>gi|17542052|ref|NP_503027.1| Protein SNR-1 [Caenorhabditis elegans]
gi|21542463|sp|Q17348.2|SMD3_CAEEL RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|5832794|emb|CAB55132.1| Protein SNR-1 [Caenorhabditis elegans]
Length = 136
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E GE Y G L + MN L E + T +DG R ++ +I
Sbjct: 6 VPIKILHEAEGHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDG-RSHQLDNVFI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RGN I+++ +PD + + + R+ + G+G G G +G GRG
Sbjct: 65 RGNKIRFMILPDMLKNAPMFKNIGRAQKGAIGMGLG----------GLDQRGRGRGTAFR 114
Query: 122 GAKGAGGGRGRGGPGGKP 139
G GG RG PGG P
Sbjct: 115 RPMGRGGPRGMSRPGGAP 132
>gi|121707652|ref|XP_001271900.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
clavatus NRRL 1]
gi|119400048|gb|EAW10474.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus
clavatus NRRL 1]
Length = 136
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPD 73
RG+ +K+ VPD
Sbjct: 69 RGSHVKFFIVPD 80
>gi|380480731|emb|CCF42263.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 138
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPD 73
RG+ +++ VPD
Sbjct: 66 RGSHVRFFIVPD 77
>gi|50307679|ref|XP_453819.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642953|emb|CAH00915.1| KLLA0D17160p [Kluyveromyces lactis]
Length = 100
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL +QGH + +EL NG+ Y G LV + MN LR+VI T +G + RM + +I
Sbjct: 4 IPIKLLNESQGHEITLELNNGDMYRGKLVENEDNMNCQLRDVIFTQANG-KMTRMDDVFI 62
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR 100
RG+ IK + VPD + K K + KPP RG R
Sbjct: 63 RGSNIKLVVVPDML--KHAPLFKKTAVSKPPPPIRGPKR 99
>gi|71405397|ref|XP_805321.1| U6 snRNA-associated Sm-like protein LSm4 [Trypanosoma cruzi strain
CL Brener]
gi|29468365|gb|AAO85522.1| putative U6 snRNA-associated Sm-like protein LSm4 [Trypanosoma
cruzi]
gi|70868683|gb|EAN83470.1| U6 snRNA-associated Sm-like protein LSm4, putative [Trypanosoma
cruzi]
Length = 113
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
++PL +L+ +G + VEL NGET NG ++ D MN+ L++ I T +GD FW+ E
Sbjct: 7 VIPLDVLRNCRGKVVSVELANGETINGTVMRVDRLMNLLLKQCIRTGAEGDVFWKSRESL 66
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKP-PGV------GRGRGRG 101
IRG +++ +R+ + + V ET++ K PG G+ RGRG
Sbjct: 67 IRGASVRNVRMDERAL--VMPETRAAVKNKSRPGTKKQATGGKKRGRG 112
>gi|353236668|emb|CCA68658.1| related to small nuclear ribonucleoprotein sm d3 [Piriformospora
indica DSM 11827]
Length = 129
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 7 VPVKLLHEALGHVITVELKTGQLYRGKLAEAEDSLNISLKDITVTGRDG-RISQLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQT 111
RG+ I++ VPD + + R P RGRG G A GR T
Sbjct: 66 RGSMIRFFIVPDML------QNAPMFKRVGPNAMRGRGIG---TARGRAT 106
>gi|390602523|gb|EIN11916.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 127
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 8 IPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG-RVSQLDQVYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGI 114
RG+ +++ VPD + + + + + G+G RGR A+ R+ +G+
Sbjct: 67 RGSMVRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRANARRGRGV 119
>gi|170087186|ref|XP_001874816.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650016|gb|EDR14257.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 127
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 7 VPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG-RVSQLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGI 114
RG+ +++ VPD + + + + + G+G RGR A+ R+ +G+
Sbjct: 66 RGSMVRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRANARRGRGV 118
>gi|255539216|ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [Ricinus communis]
gi|223551374|gb|EEF52860.1| small nuclear ribonucleoprotein, putative [Ricinus communis]
Length = 131
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEV-----IDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGR 116
RG+ ++++ +PD + ++ K +S GVGRGR A G GR
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARIKGKS--ASLGVGRGRSVAMRAKAQAAGRAGPGR 123
Query: 117 G 117
G
Sbjct: 124 G 124
>gi|367005821|ref|XP_003687642.1| hypothetical protein TPHA_0K00740 [Tetrapisispora phaffii CBS
4417]
gi|357525947|emb|CCE65208.1| hypothetical protein TPHA_0K00740 [Tetrapisispora phaffii CBS
4417]
Length = 197
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICT-----SKDGD-RFW 54
MLPL LL +G M +ELKNG T G L N D WMN+ L V+ ++DG
Sbjct: 1 MLPLYLLTNTKGQQMFIELKNGTTIQGTLTNVDNWMNLTLSNVVQVDNSEPNEDGKVEKI 60
Query: 55 RMPECYIRGNTIKYLRVPDEVIDKV 79
+ + Y+RG IKY+ + D++I+ V
Sbjct: 61 TLEQIYLRGTHIKYINLQDDIIENV 85
>gi|409080651|gb|EKM81011.1| hypothetical protein AGABI1DRAFT_112714 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197565|gb|EKV47492.1| hypothetical protein AGABI2DRAFT_192678 [Agaricus bisporus var.
bisporus H97]
Length = 128
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 8 VPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG-RVSQLDQVYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKG 113
RG+ I++ VPD + + + + + G+G RGR A+ R+ +G
Sbjct: 67 RGSMIRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRANARRGRG 118
>gi|56756683|gb|AAW26514.1| SJCHGC04758 protein [Schistosoma japonicum]
gi|226469480|emb|CAX76570.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469482|emb|CAX76571.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469484|emb|CAX76572.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469486|emb|CAX76573.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469488|emb|CAX76574.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469490|emb|CAX76575.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469492|emb|CAX76576.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469494|emb|CAX76577.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226469496|emb|CAX76578.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
gi|226472942|emb|CAX71157.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
Length = 130
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E +GE + G LV + MN+H+ ++I TS+DG R + + YI
Sbjct: 5 IPIKVLHDAEGHVVTLETVSGEVFRGKLVEAEDNMNVHMCDLIMTSRDG-RTSNLQQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGR 116
RG+ I++L +PD + K K K G GRG+ G GR T GR
Sbjct: 64 RGSKIRFLILPDML--KNSPMLKRPQGAKGLGTGRGKNAMLRAGVRGRGTLVRGR 116
>gi|50288171|ref|XP_446514.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525822|emb|CAG59441.1| unnamed protein product [Candida glabrata]
Length = 172
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREV-------ICTSKDGDRF 53
MLPL LL A+G M +ELKNG+ G L N D WMN+ L V T+ +
Sbjct: 1 MLPLYLLTNAKGQQMRIELKNGDIVEGELTNVDNWMNLTLANVNEYKGSENNTNLPQVKV 60
Query: 54 WRMPECYIRGNTIKYLRVPDEVIDKVQEET 83
+ E Y+RG IKY+ + D++I+KV+++
Sbjct: 61 VKSKEIYVRGVYIKYITLQDDIIEKVKQQI 90
>gi|169846820|ref|XP_001830124.1| small nuclear ribonucleoprotein Sm D3 [Coprinopsis cinerea
okayama7#130]
gi|116508894|gb|EAU91789.1| small nuclear ribonucleoprotein Sm D3 [Coprinopsis cinerea
okayama7#130]
Length = 126
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK G+ Y G L + +NI L+++ T +DG R ++ + YI
Sbjct: 8 VPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDG-RVSQLDQVYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG----RGREDGASGRQTKGIG 115
RG+ I++ VPD + + R P RGRG RGR R+ +G+
Sbjct: 67 RGSMIRFFIVPDML------QNAPMFKRVGPNAMRGRGIGTARGRATIMRARRGRGVA 118
>gi|302811572|ref|XP_002987475.1| hypothetical protein SELMODRAFT_183167 [Selaginella moellendorffii]
gi|300144881|gb|EFJ11562.1| hypothetical protein SELMODRAFT_183167 [Selaginella moellendorffii]
Length = 135
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+GH + VELK+GE Y G L+ C+ N L + T+KDG + ++ ++
Sbjct: 7 IPVKLLHEAEGHVVTVELKSGELYRGTLIECEDNWNCQLENITYTAKDG-KVSQLEHVFV 65
Query: 62 RGNTIKYLRVPDEV-----IDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGR 116
RG+ ++++ +PD + +++ + K + G+G GRGR A R GR
Sbjct: 66 RGSKVRFMIIPDMLKNAPMFKRLEAKIKGKGS---AGIGVGRGRAVSMRAKARAA---GR 119
Query: 117 GL 118
G+
Sbjct: 120 GV 121
>gi|195656155|gb|ACG47545.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G LV C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + ++R K +G GRGR
Sbjct: 66 RGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGVGRGRA 106
>gi|256083677|ref|XP_002578067.1| small nuclear ribonucleoprotein SM-D3 [Schistosoma mansoni]
gi|68165953|gb|AAY87930.1| small nuclear ribonucleoprotein SM-D3 [Schistosoma mansoni]
gi|353230790|emb|CCD77207.1| putative small nuclear ribonucleoprotein SM-D3 [Schistosoma
mansoni]
Length = 130
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E +GE + G LV + MN+H+ ++I TS+DG R + + YI
Sbjct: 5 IPIKVLHDAEGHVVTLETVSGEVFRGKLVEAEDNMNVHMCDLIMTSRDG-RTSNLQQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGR 116
RG+ I++L +PD + K K K G GRG+ G GR T GR
Sbjct: 64 RGSKIRFLILPDML--KNSPMLKRPQGAKGLGTGRGKNAMLRAGVRGRGTFVRGR 116
>gi|358254548|dbj|GAA55787.1| small nuclear ribonucleoprotein D3 [Clonorchis sinensis]
Length = 715
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E NGE + G LV + MNI + ++I T++DG R + + YI
Sbjct: 5 IPIKVLHDAEGHVITLETVNGEVFRGKLVEAEDNMNIQMADIILTARDG-RTSNLQQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGV-GRGRGRGR 102
RG+ I++L +PD + S ++P G G G GRG+
Sbjct: 64 RGSKIRFLILPDML-------KNSPMLKRPLGAKGLGTGRGK 98
>gi|146096286|ref|XP_001467757.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania infantum
JPCM5]
gi|398020660|ref|XP_003863493.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania donovani]
gi|134072123|emb|CAM70822.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania infantum
JPCM5]
gi|322501726|emb|CBZ36807.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania donovani]
Length = 197
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ P+ +L+ +G + +EL +GET NG ++ D MN+ +++ T DG+ FW+ EC+
Sbjct: 89 ITPIEILRNCRGKEVSIELADGETVNGTVMRTDRAMNVVIKQCTRTGADGESFWKSRECF 148
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRS 87
IRG ++K +R+ D + V +K ++
Sbjct: 149 IRGASVKNVRMTDSALVAVPAPSKRKA 175
>gi|219110787|ref|XP_002177145.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411680|gb|EEC51608.1| predicted protein, partial [Phaeodactylum tricornutum CCAP
1055/1]
Length = 87
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+G + VE+KNGE Y G LV + MN+ L +V+ T+++G + +MP Y+
Sbjct: 6 VPIKLLFEAEGMKITVEMKNGEIYRGLLVGAEDTMNVSLSDVLRTARNG-KITKMPNVYL 64
Query: 62 RGNTIKYLRVPD 73
RG++I+++ +PD
Sbjct: 65 RGSSIRFIALPD 76
>gi|330802087|ref|XP_003289052.1| hypothetical protein DICPUDRAFT_79815 [Dictyostelium purpureum]
gi|325080886|gb|EGC34423.1| hypothetical protein DICPUDRAFT_79815 [Dictyostelium purpureum]
Length = 149
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A GH + VELKNGE Y G L+ + MN ++ + T+KDG R +M CY+
Sbjct: 5 IPVKILHEADGHIVTVELKNGELYRGTLIESEDNMNCRMKNITVTAKDG-RNSQMEYCYV 63
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 64 RGSKVRFIILPD 75
>gi|115492327|ref|XP_001210791.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus terreus NIH2624]
gi|169771623|ref|XP_001820281.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus oryzae RIB40]
gi|238485796|ref|XP_002374136.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus flavus
NRRL3357]
gi|83768140|dbj|BAE58279.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|114197651|gb|EAU39351.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus terreus NIH2624]
gi|220699015|gb|EED55354.1| small nuclear ribonucleoprotein SmD3, putative [Aspergillus flavus
NRRL3357]
gi|391871729|gb|EIT80886.1| small nuclear ribonucleoprotein Sm D3 [Aspergillus oryzae 3.042]
Length = 116
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +++ VPD + + ++ + R GVG RG+ A G++
Sbjct: 69 RGSHVRFFIVPDMLRNAPMFRSRGQRGR---GVGLARGKATVQRARGQR 114
>gi|302830880|ref|XP_002947006.1| small nuclear ribonucleoprotein [Volvox carteri f. nagariensis]
gi|300268050|gb|EFJ52232.1| small nuclear ribonucleoprotein [Volvox carteri f. nagariensis]
Length = 129
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+GH + VELK+GE Y G L + MN+ L++V T +DG R ++ +I
Sbjct: 10 IPVKLLHEAEGHVVTVELKSGEMYRGELFEAEDNMNVQLKDVTATGRDG-RVSQLAHIFI 68
Query: 62 RGNTIKYLRVPD 73
RG+ +++ +PD
Sbjct: 69 RGSRVRFFIIPD 80
>gi|407923942|gb|EKG17004.1| hypothetical protein MPH_05830 [Macrophomina phaseolina MS6]
Length = 114
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + +EL G Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEATGHVVTLELTTGHVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
RG+ +++ VPD + + ++ R GVG RGR + A G
Sbjct: 66 RGSHVRFFIVPDMLRNAPMFRSRGTRGR---GVGLARGRATVNRARG 109
>gi|444314147|ref|XP_004177731.1| hypothetical protein TBLA_0A04160 [Tetrapisispora blattae CBS
6284]
gi|387510770|emb|CCH58212.1| hypothetical protein TBLA_0A04160 [Tetrapisispora blattae CBS
6284]
Length = 100
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL NGETY G LV + MN+ L++V+ T D + RM + ++
Sbjct: 4 VPIKLLSEAQGHIVSLELINGETYKGRLVESEDNMNVQLQDVLVTGTDSKQ-SRMDQVFV 62
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
RG+ I++ +P + +T +S + PP
Sbjct: 63 RGSHIRFFVLPSMLQKAPLFKTGPQSKQLPP 93
>gi|224065689|ref|XP_002301922.1| predicted protein [Populus trichocarpa]
gi|222843648|gb|EEE81195.1| predicted protein [Populus trichocarpa]
Length = 132
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + +R K +G GRGR
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASLGVGRGRS 106
>gi|71395956|ref|XP_802346.1| U6 snRNA-associated Sm-like protein LSm4 [Trypanosoma cruzi strain
CL Brener]
gi|70862121|gb|EAN80900.1| U6 snRNA-associated Sm-like protein LSm4, putative [Trypanosoma
cruzi]
Length = 164
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
++PL +L+ +G + VEL NGET NG ++ D MN+ L++ I T +GD FW+ E
Sbjct: 58 VIPLDVLRNCRGKVVSVELANGETINGTVMRVDRLMNLLLKQCIRTGAEGDVFWKSRESL 117
Query: 61 IRGNTIKYLRVPDEVI----DKVQEETKSRSDRKPPGVGRGRGRGRED 104
IRG +++ +R+ + + + KSR D K G G+ RGR D
Sbjct: 118 IRGASVRNVRMDERALVMPEARAAVRNKSRPDTKKQATG-GKKRGRGD 164
>gi|449512675|ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
sativus]
Length = 132
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
RG+ ++++ +PD + + + + +R K +G GRGR A +
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQ----------- 114
Query: 121 GGAKGAGGGRGRGGPGGKPGGSR 143
A G G GRG P P G R
Sbjct: 115 --AAGRGSAPGRGAP---PSGRR 132
>gi|388502716|gb|AFK39424.1| unknown [Lotus japonicus]
Length = 133
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G+++ C+ N L + T+KDG + ++ +I
Sbjct: 9 IPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 67
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ ++++ +PD + + R D K G G G GR + R
Sbjct: 68 RGSKVRFMVIPDMLKN---APMFKRLDAKIKGKGASLGVGRGRAVAMRA---------KA 115
Query: 122 GAKGAGGGRGRGGP 135
+ G G GRG P
Sbjct: 116 QSAGRGAAPGRGAP 129
>gi|414865765|tpg|DAA44322.1| TPA: hypothetical protein ZEAMMB73_746512 [Zea mays]
Length = 126
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G LV C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + ++R K +G GRGR
Sbjct: 66 RGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGVGRGRA 106
>gi|378756041|gb|EHY66066.1| hypothetical protein NERG_00762 [Nematocida sp. 1 ERTm2]
Length = 82
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M PL++++ A+GH + VE+K+G Y G L CD WMNIH++ I K+G + ECY
Sbjct: 1 MYPLTVIRIARGHEVKVEMKSGSIYTGMLYKCDLWMNIHIKNAI---KNGTE--EIEECY 55
Query: 61 IRGNTIK 67
I+G+ IK
Sbjct: 56 IKGSAIK 62
>gi|18394883|ref|NP_564119.1| small nuclear ribonucleoprotein-like protein [Arabidopsis thaliana]
gi|8886923|gb|AAF80609.1|AC069251_2 F2D10.7 [Arabidopsis thaliana]
gi|15724292|gb|AAL06539.1|AF412086_1 At1g20580/F2D10_6 [Arabidopsis thaliana]
gi|20334748|gb|AAM16235.1| At1g20580/F2D10_6 [Arabidopsis thaliana]
gi|332191869|gb|AEE29990.1| small nuclear ribonucleoprotein-like protein [Arabidopsis thaliana]
Length = 131
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +I
Sbjct: 7 IPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD-----EVIDKVQEETKSRSDRKPPGVGRGRGRGR 102
RG+ ++++ +PD + ++ K +S GVGRGRG R
Sbjct: 66 RGSKVRFMVIPDILKHAPMFKRLDARIKGKSSSL--GVGRGRGAMR 109
>gi|339251454|ref|XP_003372749.1| putative LSM domain protein [Trichinella spiralis]
gi|316968905|gb|EFV53105.1| putative LSM domain protein [Trichinella spiralis]
Length = 133
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL +L A+GH +++E GE + G L+ + MN ++ +V T +DG + +M + YI
Sbjct: 5 VPLKILHEAEGHIVMLETTTGEVFRGKLLEAEDNMNCNMTDVTVTYRDG-QVAQMEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ I++L +PD + + T + K P RG+ + G GRG+ G
Sbjct: 64 RGSKIRFLILPDMLKNAPMFRTMLKGVPKVPAPPRGKAAAFKSKMFCHFKGGRGRGVFSG 123
Query: 122 GAKGAGGGRGRGGP 135
G RGR P
Sbjct: 124 -----RGFRGRAVP 132
>gi|168011639|ref|XP_001758510.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168011861|ref|XP_001758621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690120|gb|EDQ76488.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690231|gb|EDQ76599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 137
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+GH + VELK+GE Y G L+ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAEGHIVTVELKSGEVYRGSLIECEDNWNSQLESITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ ++Y+ +PD + + R D K G G AS Q K R G
Sbjct: 66 RGSKVRYMIIPDMLKNA---PMFKRLDAKIKGKGSSGVGVGRGRASTMQAK--ARSAARG 120
Query: 122 GAKGAGGGRGRGGP 135
GGRG P
Sbjct: 121 SVPPPMGGRGAAPP 134
>gi|384251125|gb|EIE24603.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169]
Length = 124
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNC-DTWMNIHLREVICTSKDGDRFWRMPECY 60
+P+ LL A+GH + VELK+GETY G L D+W N+ L++V T+KDG R + +
Sbjct: 9 VPVKLLHEAEGHVITVELKSGETYRGELAEAEDSW-NVQLKQVTATAKDG-RVSHLEHIF 66
Query: 61 IRGNTIKYLRVPD 73
+RG+ ++++ +PD
Sbjct: 67 VRGSRVRFVIIPD 79
>gi|6323176|ref|NP_013248.1| Smd3p [Saccharomyces cerevisiae S288c]
gi|1173457|sp|P43321.1|SMD3_YEAST RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|807056|gb|AAB32821.1| Smd3 protein, snRNP protein Smd3=D core small nuclear
ribonucleoprotein [Saccharomyces cerevisiae, BJ3434,
Peptide, 101 aa]
gi|1262307|gb|AAB82381.1| Smd3p: Small nuclear ribonucleoprotein D3 homolog [Saccharomyces
cerevisiae]
gi|1360574|emb|CAA97719.1| SMD3 [Saccharomyces cerevisiae]
gi|151941309|gb|EDN59687.1| Sm D3 [Saccharomyces cerevisiae YJM789]
gi|190406176|gb|EDV09443.1| small nuclear ribonucleoprotein Sm D3 [Saccharomyces cerevisiae
RM11-1a]
gi|256273010|gb|EEU07972.1| Smd3p [Saccharomyces cerevisiae JAY291]
gi|259148134|emb|CAY81383.1| Smd3p [Saccharomyces cerevisiae EC1118]
gi|285813562|tpg|DAA09458.1| TPA: Smd3p [Saccharomyces cerevisiae S288c]
gi|323303905|gb|EGA57686.1| Smd3p [Saccharomyces cerevisiae FostersB]
gi|323308144|gb|EGA61397.1| Smd3p [Saccharomyces cerevisiae FostersO]
gi|323332570|gb|EGA73978.1| Smd3p [Saccharomyces cerevisiae AWRI796]
gi|323336667|gb|EGA77933.1| Smd3p [Saccharomyces cerevisiae Vin13]
gi|323353994|gb|EGA85847.1| Smd3p [Saccharomyces cerevisiae VL3]
gi|349579868|dbj|GAA25029.1| K7_Smd3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764414|gb|EHN05938.1| Smd3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|392297664|gb|EIW08763.1| Smd3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 101
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL G TY G LV + MN+ LR+VI T G M + ++
Sbjct: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGA-VTHMDQIFV 64
Query: 62 RGNTIKYLRVPD 73
RG+ IK++ VPD
Sbjct: 65 RGSQIKFIVVPD 76
>gi|398407783|ref|XP_003855357.1| hypothetical protein MYCGRDRAFT_36580 [Zymoseptoria tritici IPO323]
gi|339475241|gb|EGP90333.1| hypothetical protein MYCGRDRAFT_36580 [Zymoseptoria tritici IPO323]
Length = 119
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VE+ +G+TY G L+ + MN+ L + T +DG R + YI
Sbjct: 7 IPIKLLNEATGHQVTVEITSGQTYRGKLIEAEDNMNVQLENINVTQRDG-RVTHLDRVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
RG+ ++ VPD + + +K R GVG RGR + A G
Sbjct: 66 RGSHVRLFIVPDMLRNAPMFRSKGVRGR---GVGLARGRATVNRARG 109
>gi|50545379|ref|XP_500227.1| YALI0A19030p [Yarrowia lipolytica]
gi|49646092|emb|CAG84160.1| YALI0A19030p [Yarrowia lipolytica CLIB122]
Length = 105
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL LL AQGH + VEL +G TY G L+ + MN+ +R+V T++ G R + + YI
Sbjct: 6 IPLKLLSEAQGHVVTVELTSGHTYRGKLIEAEDNMNVQIRDVTVTAR-GGRVSHLEQVYI 64
Query: 62 RGNTIKYLRVPD 73
RG+ +++ +P+
Sbjct: 65 RGSHVRFFSIPE 76
>gi|111226987|ref|XP_001134627.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|90971301|gb|EAS66961.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A GH + VELKNGE Y G L+ + MN ++ + T++DG R +M CY+
Sbjct: 5 IPVKILHEADGHIVTVELKNGELYRGTLIESEDNMNCRMKNITVTARDG-RNSQMEYCYV 63
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 64 RGSKVRFIILPD 75
>gi|367016010|ref|XP_003682504.1| hypothetical protein TDEL_0F04820 [Torulaspora delbrueckii]
gi|359750166|emb|CCE93293.1| hypothetical protein TDEL_0F04820 [Torulaspora delbrueckii]
Length = 100
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL GETY G LV + MN+ LR+ T D + RM ++
Sbjct: 4 IPVKLLNEAQGHIVSLELTTGETYRGKLVESEDNMNVQLRDATVTGADS-KVTRMNHVFV 62
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
RG+ I++ VPD + + +T +S PP
Sbjct: 63 RGSQIRFFVVPDMLENAPLFKTGPQSRPTPP 93
>gi|323454301|gb|EGB10171.1| hypothetical protein AURANDRAFT_36815 [Aureococcus anophagefferens]
Length = 113
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 12/100 (12%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL +GH + +ELKNGE Y GHL + MN + +V+ T++DG R ++ YI
Sbjct: 10 VPIKLLHEGEGHMVTIELKNGEIYRGHLDESEETMNCLVTDVVVTARDG-RVTKLENVYI 68
Query: 62 RGNTIK-----YLRVPD-----EVIDKVQEETKSRSDRKP 91
RG+ IK ++ +PD V +KV+E K+ D KP
Sbjct: 69 RGSQIKRERRAFMILPDLLKHSPVFEKVKELKKA-DDAKP 107
>gi|449455595|ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
sativus]
Length = 132
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDD 120
RG+ + ++ +PD + + + + +R K +G GRGR A +
Sbjct: 66 RGSKVSFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQ----------- 114
Query: 121 GGAKGAGGGRGRGGPGGKPGGSR 143
A G G GRG P P G R
Sbjct: 115 --AAGRGSAPGRGAP---PSGRR 132
>gi|45270956|gb|AAS56859.1| YLR147C [Saccharomyces cerevisiae]
Length = 101
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL G TY G LV + MN+ LR+VI T G M + ++
Sbjct: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGA-VTHMDQIFV 64
Query: 62 RGNTIKYLRVPD 73
RG+ IK++ VPD
Sbjct: 65 RGSQIKFIVVPD 76
>gi|261335446|emb|CBH18440.1| U6 snRNA-associated Sm-like protein LSm4p [Trypanosoma brucei
gambiense DAL972]
Length = 127
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ PL +L+ + + VEL GET NG +V D MN+ L++ I TS DG+ FWR E
Sbjct: 7 ITPLDVLRNCRAKVVSVELAGGETINGTVVRVDRAMNMVLKQCIRTSADGEAFWRSRESL 66
Query: 61 IRGNTIKYLRVPDEVI---DKVQEETKSRSDRK 90
IRG +++ +R+ + + D E S+S K
Sbjct: 67 IRGASVRNVRMDERAVIIADAQLREVTSKSKNK 99
>gi|357145745|ref|XP_003573751.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Brachypodium
distachyon]
Length = 134
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G ++ C+ N + + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + ++R K +G GRGR
Sbjct: 66 RGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGVGRGRA 106
>gi|223975955|gb|ACN32165.1| unknown [Zea mays]
gi|413935154|gb|AFW69705.1| hypothetical protein ZEAMMB73_559735 [Zea mays]
Length = 125
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + ++R K VG GRGR
Sbjct: 66 RGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAVGVGRGRA 106
>gi|224083270|ref|XP_002306975.1| predicted protein [Populus trichocarpa]
gi|222856424|gb|EEE93971.1| predicted protein [Populus trichocarpa]
Length = 132
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEASGHIVTVELKSGELYRGGMVECEDNWNCQLESITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + +R K +G GRGR
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASLGVGRGRS 106
>gi|74025772|ref|XP_829452.1| U6 snRNA-associated Sm-like protein LSm4p [Trypanosoma brucei
TREU927]
gi|45331345|gb|AAS57926.1| Lsm4p [Trypanosoma brucei]
gi|70834838|gb|EAN80340.1| U6 snRNA-associated Sm-like protein LSm4p [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 127
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ PL +L+ + + VEL GET NG +V D MN+ L++ I TS DG+ FWR E
Sbjct: 7 ITPLDVLRNCRAKVVSVELAGGETINGTVVRVDRAMNMVLKQCIRTSADGEAFWRSRESL 66
Query: 61 IRGNTIKYLRVPDEVI---DKVQEETKSRSDRK 90
IRG +++ +R+ + + D E S+S K
Sbjct: 67 IRGASVRNVRMDERAVIIADAQLREVTSKSKNK 99
>gi|15223010|ref|NP_177757.1| snRNP core protein SMD3 [Arabidopsis thaliana]
gi|6554488|gb|AAF16670.1|AC012394_19 putative small nuclear ribonucleoprotein Sm D3; 79504-78381
[Arabidopsis thaliana]
gi|6573711|gb|AAF17631.1|AC009978_7 T23E18.23 [Arabidopsis thaliana]
gi|14190503|gb|AAK55732.1|AF380651_1 At1g76300/F15M4_20 [Arabidopsis thaliana]
gi|15809764|gb|AAL06810.1| At1g76300/F15M4_20 [Arabidopsis thaliana]
gi|21592857|gb|AAM64807.1| small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
gi|332197701|gb|AEE35822.1| snRNP core protein SMD3 [Arabidopsis thaliana]
Length = 128
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHESSGHIVSVEMKSGELYRGSMIECEDNWNCQLENITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRG 99
RG+ +++L +PD + + + ++ + + GVGRGRG
Sbjct: 66 RGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLGVGRGRG 104
>gi|212538167|ref|XP_002149239.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
marneffei ATCC 18224]
gi|210068981|gb|EEA23072.1| small nuclear ribonucleoprotein SmD3, putative [Talaromyces
marneffei ATCC 18224]
Length = 114
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGQVYRGKLLEDN--MNVQLKDITVTARDG-RVSHLDQVYI 66
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RG+ +++ VPD + + T+ + R GVG RG+ + A G++
Sbjct: 67 RGSHVRFFIVPDMLRNAPMFRTRGQRGR---GVGLARGKATVNRARGQR 112
>gi|297845022|ref|XP_002890392.1| hypothetical protein ARALYDRAFT_335306 [Arabidopsis lyrata subsp.
lyrata]
gi|297336234|gb|EFH66651.1| hypothetical protein ARALYDRAFT_335306 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +I
Sbjct: 7 IPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEV-----IDKVQEETKSRSDRKPPGVGRGRGRGR 102
RG+ ++++ +PD + ++ K +S GVGRGR R
Sbjct: 66 RGSKVRFMVIPDILKHAPMFKRLDARIKGKSS--SLGVGRGRAAMR 109
>gi|226472944|emb|CAX71158.1| Small nuclear ribonucleoprotein SM D3 [Schistosoma japonicum]
Length = 147
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E +GE + G LV + MN+H+ ++I TS+DG R + + YI
Sbjct: 5 IPIKVLHDAEGHVVTLETVSGEVFRGKLVEAEDNMNVHMCDLIMTSRDG-RTSNLQQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGR 116
RG+ I++L +PD + K K K G GRG+ G GR T GR
Sbjct: 64 RGSKIRFLILPDML--KNSPMLKRPQGAKGLGTGRGKNAMLRAGVRGRGTLVRGR 116
>gi|357519697|ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
gi|355524159|gb|AET04613.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
gi|388503694|gb|AFK39913.1| unknown [Medicago truncatula]
Length = 131
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G+++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + +R K +G GRGR
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRA 106
>gi|157873766|ref|XP_001685387.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania major strain
Friedlin]
gi|68128459|emb|CAJ08573.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania major strain
Friedlin]
Length = 189
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ P+ +L+ +G + +EL +GET NG ++ D MN+ +++ T DG+ FW+ EC+
Sbjct: 81 ITPIEILRNCRGKEVSIELADGETVNGTVMRTDRAMNVVIKQCTRTGADGESFWKSRECF 140
Query: 61 IRGNTIKYLRVPDEVIDKV 79
IRG ++K +R+ D + V
Sbjct: 141 IRGASVKNVRMTDSALVAV 159
>gi|254584500|ref|XP_002497818.1| ZYRO0F14212p [Zygosaccharomyces rouxii]
gi|238940711|emb|CAR28885.1| ZYRO0F14212p [Zygosaccharomyces rouxii]
Length = 100
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL GETY G LV + MN+ LR+V T D + RM ++
Sbjct: 4 IPVKLLNEAQGHVVSLELTTGETYRGKLVESEDNMNVQLRDVTVTGVDS-QVTRMDHVFV 62
Query: 62 RGNTIKYLRVPD 73
RG+ +++ VPD
Sbjct: 63 RGSHVRFFVVPD 74
>gi|351721470|ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
gi|356525557|ref|XP_003531391.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Glycine max]
gi|255626793|gb|ACU13741.1| unknown [Glycine max]
Length = 131
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + +R K +G GRGR
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRA 106
>gi|358055777|dbj|GAA98122.1| hypothetical protein E5Q_04805 [Mixia osmundae IAM 14324]
Length = 128
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P LL + GH + +ELK G+TY G L++ + +NI + ++ T +DG R ++ + YI
Sbjct: 7 IPCKLLHESVGHVITIELKTGQTYRGKLLDAEDNLNISMSQITVTQRDG-RVTQLDQVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG I + VPD + + + + K G+G RGR
Sbjct: 66 RGPMINFFIVPDMLAHAPMFKRQGPNALKGRGIGTARGRA 105
>gi|440492904|gb|ELQ75435.1| Small nuclear ribonucleoprotein (snRNP) [Trachipleistophora
hominis]
Length = 91
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M P++L++ ++G + VELKN +TY G LV CD MN+ L+ V S DG++ + EC
Sbjct: 1 MYPVTLVRISKGSVIDVELKNNDTYRGTLVACDLLMNLRLKNVRLVSSDGEKDFN--ECI 58
Query: 61 IRGNTIKYLRVPDEVIDKVQE 81
+RG+ +K++++ ++V+ VQE
Sbjct: 59 LRGSAVKHIKLNNKVL-YVQE 78
>gi|339251460|ref|XP_003372752.1| putative LSM domain protein [Trichinella spiralis]
gi|316968894|gb|EFV53095.1| putative LSM domain protein [Trichinella spiralis]
Length = 133
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL +L A+GH +++E GE + G L+ + MN ++ +V T +DG + +M + YI
Sbjct: 5 VPLKILHEAEGHIVMLETTTGEVFRGKLLEAEDNMNCNMTDVTVTYRDG-QVTQMDQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ I++L +PD + + +T + K P RG+ + G GRG+
Sbjct: 64 RGSKIRFLILPDMLKNAPMFKTMLKGVPKVPAPPRGKAAAFKSKMFCHFEGGRGRGVFSS 123
Query: 122 -GAKGAGGGR 130
G +G+ R
Sbjct: 124 RGFRGSSAAR 133
>gi|313220248|emb|CBY31107.1| unnamed protein product [Oikopleura dioica]
gi|313235868|emb|CBY11255.1| unnamed protein product [Oikopleura dioica]
Length = 162
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + VE GE Y G L+ + MN+ LR+V T +DG R + +I
Sbjct: 5 VPVKVLHEAEGHTVTVESATGELYRGVLIEAEDNMNMQLRDVSATYRDG-RSAHLSNIFI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ +PD + + +S ++P G+GRG RG
Sbjct: 64 RGSQVRFAILPDMLKNAPMLNVDKKS-KQPRGLGRGAFRG 102
>gi|116780936|gb|ABK21888.1| unknown [Picea sitchensis]
Length = 133
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G+++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLEGITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRGREDGASGRQT 111
RG+ ++++ +PD + + + +R K +G GRGR A + T
Sbjct: 66 RGSKVRFMVIPDMLRNAPMFRRLDARIKGKGSSIGVGRGRAVAMRARAQAT 116
>gi|403213468|emb|CCK67970.1| hypothetical protein KNAG_0A02810 [Kazachstania naganishii CBS
8797]
Length = 100
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL+ AQGH + +EL GETY G L+ + MN+ L +V T DG R M ++
Sbjct: 3 IPIKLLQEAQGHIVDLELHTGETYRGRLIGSEDNMNVQLGDVTVTKVDGSR-TTMEHVFV 61
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGV 94
RG+ +++ +PD + + + R PP V
Sbjct: 62 RGSQVRFFTLPDMLRNAPLFKKAENQSRAPPPV 94
>gi|21555384|gb|AAM63846.1| small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
Length = 131
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +I
Sbjct: 7 IPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD-----EVIDKVQEETKSRSDRKPPGVGRGRGRGR 102
RG+ ++++ +PD + ++ K +S GVGRGR R
Sbjct: 66 RGSKVRFMVIPDILKHAPMFKRLDARIKGKSSSL--GVGRGRAAMR 109
>gi|366999829|ref|XP_003684650.1| hypothetical protein TPHA_0C00590 [Tetrapisispora phaffii CBS
4417]
gi|357522947|emb|CCE62216.1| hypothetical protein TPHA_0C00590 [Tetrapisispora phaffii CBS
4417]
Length = 100
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL GETY G LV+ + MN+ LR+V T + + RM + +I
Sbjct: 4 IPIKLLSEAQGHVVSLELSTGETYRGKLVDSEDNMNVQLRDVTHTGVNSE-VTRMDDVFI 62
Query: 62 RGNTIKYLRVPD 73
RG+ I++ +PD
Sbjct: 63 RGSQIRFFALPD 74
>gi|301108107|ref|XP_002903135.1| small nuclear ribonucleoprotein Sm D3 [Phytophthora infestans
T30-4]
gi|262097507|gb|EEY55559.1| small nuclear ribonucleoprotein Sm D3 [Phytophthora infestans
T30-4]
Length = 113
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+SLL +G + +ELKNGE Y GHL + MN L +V+ T +DG + ++ Y+
Sbjct: 7 VPISLLHEGEGRTVTIELKNGEVYRGHLTESEDSMNCQLSDVVLTQRDGQK-SKLELVYV 65
Query: 62 RGNTIKYLRVPD 73
RG+ IK + +PD
Sbjct: 66 RGSQIKLVILPD 77
>gi|429965895|gb|ELA47892.1| hypothetical protein VCUG_00612 [Vavraia culicis 'floridensis']
Length = 91
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M P++L++ ++G + VELKN +TY G LV CD MN+ LR V + DG++ + EC
Sbjct: 1 MYPVTLVRISKGSTIDVELKNNDTYRGTLVACDLLMNLRLRNVRLVNGDGEKDF--SECI 58
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSR 86
+RG+ +K++++ ++V+ VQE + +
Sbjct: 59 LRGSAVKHIKLNNKVL-YVQEMVEKK 83
>gi|67614518|ref|XP_667378.1| ENSANGP00000016613 [Cryptosporidium hominis TU502]
gi|126648602|ref|XP_001388069.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|54658514|gb|EAL37152.1| ENSANGP00000016613 [Cryptosporidium hominis]
gi|126117157|gb|EAZ51257.1| hypothetical protein cgd4_2710 [Cryptosporidium parvum Iowa II]
Length = 77
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 36 MNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVG 95
MN+ L VIC S+DG+ F++M ECYIRGN IK +R+ DE I+ +++ R + G
Sbjct: 1 MNLALNNVICNSRDGNGFFKMVECYIRGNNIKLIRISDENINTAKDDMTQRETARLGNRG 60
Query: 96 RGRGRGR 102
R R R
Sbjct: 61 RPRNETR 67
>gi|313214383|emb|CBY42774.1| unnamed protein product [Oikopleura dioica]
Length = 137
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + VE GE Y G L+ + MN+ LR+V T +DG R + +I
Sbjct: 5 VPVKVLHEAEGHTVTVESATGELYRGVLIEAEDNMNMQLRDVSATYRDG-RSAHLSNIFI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ +++ +PD + + +S ++P G+GRG RG
Sbjct: 64 RGSQVRFAILPDMLKNAPMLNVDKKS-KQPRGLGRGAFRG 102
>gi|401426861|ref|XP_003877914.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494161|emb|CBZ29458.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 190
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ P+ +L+ +G + +EL +GET NG ++ D MN+ +++ T DG+ FW+ EC+
Sbjct: 82 ITPIEILRNCRGKEVSIELADGETVNGTVMRTDRAMNVVIKQCTRTGADGESFWKARECF 141
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
+RG ++K +R+ D + +K RK G G+G +E +G
Sbjct: 142 VRGASVKNVRMTDSALVAAPVPSK----RKAAG-GKGAHAHKEKSVAG 184
>gi|401840421|gb|EJT43250.1| SMD3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 99
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL G TY G LV + MN+ LR+V T G M + ++
Sbjct: 4 VPVKLLNEAQGHVVTLELTTGATYRGKLVESEDSMNVQLRDVTATEPHGA-VTHMDQIFV 62
Query: 62 RGNTIKYLRVPD 73
RG+ IK++ VPD
Sbjct: 63 RGSQIKFIVVPD 74
>gi|159480580|ref|XP_001698360.1| small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158282100|gb|EDP07853.1| small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 127
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+GH + VELK+GE Y G L + + MN L++V T +DG R ++ +I
Sbjct: 10 IPVKLLHEAEGHVVTVELKSGEMYRGELCDAEDNMNCQLKDVTATGRDG-RVTQLAHLFI 68
Query: 62 RGNTIKYLRVPD 73
RG+ +++ +PD
Sbjct: 69 RGSRVRFFIIPD 80
>gi|363751767|ref|XP_003646100.1| hypothetical protein Ecym_4216 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889735|gb|AET39283.1| hypothetical protein Ecym_4216 [Eremothecium cymbalariae
DBVPG#7215]
Length = 102
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL GETY G LV + MN LR+V T+++G + M +I
Sbjct: 6 IPVKLLNEAQGHTVSLELTTGETYRGKLVESEDNMNCQLRDVTATARNG-QVTHMDHVFI 64
Query: 62 RGNTIKYLRVPD 73
RG+ +++ VPD
Sbjct: 65 RGSHVRFFVVPD 76
>gi|261193182|ref|XP_002622997.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces dermatitidis
SLH14081]
gi|239589132|gb|EEQ71775.1| small nuclear ribonucleoprotein Sm D3 [Ajellomyces dermatitidis
SLH14081]
Length = 124
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 10 IPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 68
Query: 62 RGNTIKYLRVPD 73
RG+ +++ VPD
Sbjct: 69 RGSHVRFFIVPD 80
>gi|91084331|ref|XP_972583.1| PREDICTED: similar to AGAP012380-PA [Tribolium castaneum]
Length = 137
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPDEVIDK--VQEETKS------RSDRKPPGVGRGRGRGREDGASGRQTKG 113
RG+ I++L +PD + + +++TK+ +S RGRGRG G
Sbjct: 64 RGSKIRFLILPDMLKNAPMFKKQTKAGTAGRGKSAILRAQAARGRGRGANPAVRG----- 118
Query: 114 IGR-GLDDGGAKGAGGGRGR 132
GR G +GA GRGR
Sbjct: 119 -GRGGAWQAPGQGAAAGRGR 137
>gi|146422975|ref|XP_001487421.1| hypothetical protein PGUG_00798 [Meyerozyma guilliermondii ATCC
6260]
gi|146388542|gb|EDK36700.1| hypothetical protein PGUG_00798 [Meyerozyma guilliermondii ATCC
6260]
Length = 105
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 36 MNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET 83
MN+ L++VI +S GD F ++PE YIRG IKY+R+PDE++D +E+
Sbjct: 1 MNLTLKDVIQSSASGDEFLKLPEIYIRGIHIKYMRMPDEIMDHAKEQN 48
>gi|387594121|gb|EIJ89145.1| hypothetical protein NEQG_00964 [Nematocida parisii ERTm3]
gi|387595679|gb|EIJ93302.1| hypothetical protein NEPG_01644 [Nematocida parisii ERTm1]
Length = 83
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M PL++++ A+GH + +E+K+G Y G L CD WMNIH++ + K+ + ECY
Sbjct: 1 MYPLTVIRIARGHEVKIEMKSGSVYTGTLHKCDLWMNIHMKNAV---KNASE--EIEECY 55
Query: 61 IRGNTIK 67
I+G+ IK
Sbjct: 56 IKGSAIK 62
>gi|45200940|ref|NP_986510.1| AGL157Cp [Ashbya gossypii ATCC 10895]
gi|44985710|gb|AAS54334.1| AGL157Cp [Ashbya gossypii ATCC 10895]
gi|374109756|gb|AEY98661.1| FAGL157Cp [Ashbya gossypii FDAG1]
Length = 102
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL GETY G LV + MN LR+V T+++G + M ++
Sbjct: 6 IPVKLLNEAQGHTVSLELTTGETYRGKLVGSEDNMNCQLRDVTATARNG-QVTHMDHVFV 64
Query: 62 RGNTIKYLRVPD 73
RG+ +++ VPD
Sbjct: 65 RGSHVRFFVVPD 76
>gi|19112491|ref|NP_595699.1| Sm snRNP core protein Smd3 [Schizosaccharomyces pombe 972h-]
gi|12230614|sp|Q9UUC6.1|SMD3_SCHPO RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|5689996|emb|CAB52041.1| Sm snRNP core protein Smd3 [Schizosaccharomyces pombe]
Length = 97
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
L + LL QGH + +EL+NG TY G L+ + MN +R++ T++DG R + + YI
Sbjct: 3 LCIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDG-RVSHLDQVYI 61
Query: 62 RGNTIKYLRVPD 73
RG+ I++L VPD
Sbjct: 62 RGSHIRFLIVPD 73
>gi|195657699|gb|ACG48317.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gi|414865766|tpg|DAA44323.1| TPA: small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G LV C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSRVRFMIIPD 77
>gi|340059607|emb|CCC53997.1| putative small nucleolar ribonucleoprotein-like protein
[Trypanosoma vivax Y486]
Length = 115
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+ PL +L+ +G + VEL GET NG +V D MN+ L++ I T+ DG FWR E
Sbjct: 7 VTPLDVLRNCRGKVVSVELAGGETVNGTVVRVDRAMNMVLKQCIRTASDGATFWRSRETL 66
Query: 61 IRGNTIKYLRVPDEVI 76
+RG +++ +R+ + +
Sbjct: 67 LRGASVRNVRMDERAL 82
>gi|195658123|gb|ACG48529.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G LV C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSRVRFMIIPD 77
>gi|225428263|ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
gi|297744494|emb|CBI37756.3| unnamed protein product [Vitis vinifera]
Length = 132
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSKVRFMVIPD 77
>gi|333656534|gb|AEF68170.1| Sm-D3-like protein [Physarum polycephalum]
Length = 134
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+GH + +ELK GE Y G L+ + MN L + T++DG R + Y+
Sbjct: 5 VPIKLLHEAEGHIVTIELKTGEVYRGQLIESEDNMNCQLGNITLTARDG-RISNLEHAYV 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|406867417|gb|EKD20455.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 115
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ +G+ Y G L+ + MN+ L+++ T++DG R + + YI
Sbjct: 7 IPIKLLNEAQGHVVTLEITSGQVYRGKLLEAEDNMNVQLKDITVTARDG-RVSHLDQVYI 65
Query: 62 RGNTIKYLRVPD 73
RG+ +++ VPD
Sbjct: 66 RGSHVRFFIVPD 77
>gi|453087211|gb|EMF15252.1| Sm-like ribonucleo protein, partial [Mycosphaerella populorum
SO2202]
Length = 115
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VE+ +G+TY G L+ + MN+ L + T +DG R + YI
Sbjct: 7 IPIKLLNEATGHQVTVEIDSGQTYRGKLIEAEDNMNVQLENINVTQRDG-RVTHLDRVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++ VPD + + +++ R GVG RGR
Sbjct: 66 RGSHVRLFIVPDMLRNAPMFRSRNARGR---GVGLARGRA 102
>gi|226507464|ref|NP_001150683.1| LOC100284316 [Zea mays]
gi|194696928|gb|ACF82548.1| unknown [Zea mays]
gi|195619600|gb|ACG31630.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gi|195641042|gb|ACG39989.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gi|413956400|gb|AFW89049.1| Small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSRVRFMIIPD 77
>gi|148909638|gb|ABR17910.1| unknown [Picea sitchensis]
Length = 133
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G+++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLEGITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEV-----IDKVQEETKSRSDRKPPGVGRGRG 99
RG+ ++++ +PD + ++ K R GVGRGR
Sbjct: 66 RGSKVRFMVIPDMLRNAPMFRRLDARIKGRGS--SLGVGRGRA 106
>gi|307192021|gb|EFN75405.1| Small nuclear ribonucleoprotein Sm D3 [Harpegnathos saltator]
Length = 142
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR-GREDGASGR-QTKGIGRGLD 119
RG+ I++L +PD + K+ K PG G+G G GR A R Q +G GRG +
Sbjct: 64 RGSKIRFLILPDML--------KNAPMFKRPG-GKGSGTAGRGKSAILRAQARGRGRGQN 114
Query: 120 DGGAKGAGGGRGRGGPGGKPGGSRGG 145
G KG G G+PGGS+ G
Sbjct: 115 QRG-KGTGSAPWL-NQQGQPGGSQAG 138
>gi|297839503|ref|XP_002887633.1| hypothetical protein ARALYDRAFT_476783 [Arabidopsis lyrata subsp.
lyrata]
gi|297333474|gb|EFH63892.1| hypothetical protein ARALYDRAFT_476783 [Arabidopsis lyrata subsp.
lyrata]
Length = 129
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + +KDG + ++ +I
Sbjct: 7 IPVKLLHESSGHIVSVEMKSGELYRGSMIECEDNWNCQLENITYKAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRG 99
RG+ ++++ +PD + + + ++ + + GVGRGRG
Sbjct: 66 RGSLVRFIVIPDMLKNAPMFKDVRGKGKSSSLGVGRGRG 104
>gi|226505392|ref|NP_001152085.1| LOC100285722 [Zea mays]
gi|194699166|gb|ACF83667.1| unknown [Zea mays]
gi|195652485|gb|ACG45710.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gi|413935155|gb|AFW69706.1| Small nuclear ribonucleoprotein Sm D3 [Zea mays]
Length = 132
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSRVRFMIIPD 77
>gi|320165991|gb|EFW42890.1| small nuclear ribonucleoprotein Sm D3 [Capsaspora owczarzaki ATCC
30864]
Length = 135
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
P+ +L A GH + +ELK E Y G L + MN L ++ TS+DG + R+ + YIR
Sbjct: 6 PIKVLHEAVGHIVTIELKTSEVYRGKLFQVEDNMNCQLEDITFTSRDG-QVSRLQQVYIR 64
Query: 63 GNTIKYLRVPDEV 75
G+ +++ VPD +
Sbjct: 65 GSKVRFFIVPDMI 77
>gi|401840547|gb|EJT43325.1| LSM4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 163
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSK----------DGDRFWRMPECYIRGN 64
M +ELKNGE G L N D WMN+ L V S+ D + ++ E Y+RG
Sbjct: 1 MQIELKNGEIIQGTLTNVDNWMNLTLSNVTEYSEENGIDSENNADKSKAIKLNEIYVRGT 60
Query: 65 TIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGR 98
IK++++ D +IDKV+++ S + G G R
Sbjct: 61 FIKFIKLQDNIIDKVKQQINSNNSSNNSGPGHKR 94
>gi|303388597|ref|XP_003072532.1| U6 snRNA associated Sm-like protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303301673|gb|ADM11172.1| U6 snRNA associated Sm-like protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 88
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M PL+LL+ ++ + +ELKN + G L CD MN+HL+ V +DG + + ECY
Sbjct: 1 MYPLTLLRISRNKIVELELKNNDHLRGLLYKCDMAMNLHLKSVTIQKEDGSSIF-INECY 59
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKS 85
++G +IK +++ +++ + +EE+ S
Sbjct: 60 LKGTSIKLVKLESKILLEQREESVS 84
>gi|396081027|gb|AFN82646.1| U6 snRNA associated Sm-like protein [Encephalitozoon romaleae
SJ-2008]
Length = 87
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M PL+LL+ ++ + +ELKN + G L CD MN+HL+ V +DG + + ECY
Sbjct: 1 MYPLTLLRISRNKIVELELKNNDHLRGLLYKCDMAMNLHLKSVTIQKEDGSSIF-INECY 59
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKS 85
++G +IK +++ +++ + +EE S
Sbjct: 60 LKGTSIKLVKLESKILLEQKEEAVS 84
>gi|388516583|gb|AFK46353.1| unknown [Lotus japonicus]
Length = 132
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + +R K +G GRGR
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARVKGKGASLGVGRGRA 106
>gi|242041599|ref|XP_002468194.1| hypothetical protein SORBIDRAFT_01g041430 [Sorghum bicolor]
gi|241922048|gb|EER95192.1| hypothetical protein SORBIDRAFT_01g041430 [Sorghum bicolor]
Length = 132
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSRVRFMIIPD 77
>gi|350293601|gb|EGZ74686.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 236
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLV-----------NCDTWMNIHLREVICTSKDG 50
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG
Sbjct: 116 IPIKLLNEAQGHIVTLEITSGQTYRGKLIEAMLTNALPPKTAEDNMNVQLKDITVTARDG 175
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
R + + YIRG+ +++ VPD + + +++ R GVG RGR
Sbjct: 176 -RVSHLEQVYIRGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 222
>gi|167524150|ref|XP_001746411.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775173|gb|EDQ88798.1| predicted protein [Monosiga brevicollis MX1]
Length = 325
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ ++ +GH + +ELKNGE Y G LV + MN LR+V T++DG + + YI
Sbjct: 177 VPIKIMHEGEGHVVTIELKNGEIYRGKLVEAEDNMNSQLRDVTFTARDG-QVAHVESVYI 235
Query: 62 RGNTIKYLRVPD 73
RG+ I++ +PD
Sbjct: 236 RGSKIRFFVLPD 247
>gi|344301770|gb|EGW32075.1| hypothetical protein SPAPADRAFT_138952 [Spathaspora passalidarum
NRRL Y-27907]
Length = 103
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTS-KDGDRFWRMPECY 60
+P+ LL AQGH + VEL G+TY G L+ + MN+ L +V+ T K GD + M + +
Sbjct: 6 IPVRLLNEAQGHVISVELTTGDTYRGKLLENEDNMNLSLYDVVITKGKTGDTTY-MNQVF 64
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
+RG+ I+++ VPD + + K KPP
Sbjct: 65 VRGSMIRFISVPDILKNAPMFFMKPGDKPKPP 96
>gi|241955335|ref|XP_002420388.1| small nuclear ribonucleoprotein, putative; snRNP core protein,
putative [Candida dubliniensis CD36]
gi|223643730|emb|CAX41466.1| small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
Length = 106
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL NG+TY G L+ + MN+ L E T + M + +I
Sbjct: 5 IPVRLLNEAQGHIISIELVNGDTYRGKLLENEDNMNLSLYEATITQGKSGKVSHMDQVFI 64
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ VPD
Sbjct: 65 RGSMIRFISVPD 76
>gi|388854781|emb|CCF51674.1| related to small nuclear ribonucleoprotein sm d3 [Ustilago hordei]
Length = 134
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ L+ A GH + VELK G Y G L + + N+ +++V T+ DG + + YI
Sbjct: 6 IPVKLIHEAVGHVITVELKGGACYRGTLYDAEDSFNVAMKDVTATAPDGKQ-SHLENIYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQ 110
RGN ++++ VPD + + + K G+G RGR A R+
Sbjct: 65 RGNMLRFIIVPDMLQQAPMFKRIGPNAMKGRGIGSARGRATILRAQARR 113
>gi|336473142|gb|EGO61302.1| hypothetical protein NEUTE1DRAFT_107812 [Neurospora tetrasperma
FGSC 2508]
Length = 247
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLV-----------NCDTWMNIHLREVICTSKDG 50
+P+ LL AQGH + +E+ +G+TY G L+ + MN+ L+++ T++DG
Sbjct: 127 IPIKLLNEAQGHIVTLEITSGQTYRGKLIEAMLTNALPPKTAEDNMNVQLKDITVTARDG 186
Query: 51 DRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
R + + YIRG+ +++ VPD + + +++ R GVG RGR
Sbjct: 187 -RVSHLEQVYIRGSHVRFFIVPDMLRNAPMFRSRNVRGR---GVGLARGRA 233
>gi|68489557|ref|XP_711397.1| hypothetical protein CaO19.11622 [Candida albicans SC5314]
gi|68489657|ref|XP_711350.1| hypothetical protein CaO19.4146 [Candida albicans SC5314]
gi|46432646|gb|EAK92119.1| hypothetical protein CaO19.4146 [Candida albicans SC5314]
gi|46432696|gb|EAK92167.1| hypothetical protein CaO19.11622 [Candida albicans SC5314]
gi|238882554|gb|EEQ46192.1| small nuclear ribonucleoprotein Sm D3 [Candida albicans WO-1]
Length = 106
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL NG+TY G L+ + MN+ L E T + M + +I
Sbjct: 5 IPVRLLNEAQGHIISIELINGDTYRGKLLENEDNMNLSLYEATITQGKSGKVSHMDQVFI 64
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ VPD
Sbjct: 65 RGSMIRFISVPD 76
>gi|303273780|ref|XP_003056242.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462326|gb|EEH59618.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 122
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+GH + +ELKNGETY G L+ + N L + T +DG R ++ YI
Sbjct: 11 IPVKLLHEAEGHTVTIELKNGETYRGTLLESEDNWNCQLEGITQTGRDG-RVNQLEHAYI 69
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 70 RGSKIRFLVIPD 81
>gi|452845934|gb|EME47867.1| hypothetical protein DOTSEDRAFT_42182 [Dothistroma septosporum
NZE10]
Length = 115
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VE+ +G+TY G L+ + MN+ L + T +DG R + YI
Sbjct: 7 IPIKLLNEATGHQVTVEIDSGQTYRGKLIEAEDNMNVQLENINVTQRDG-RVTHLDRVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++ VPD + + ++ R GVG RGR
Sbjct: 66 RGSHVRLFIVPDMLRNAPMFRSRGTRGR---GVGLARGRA 102
>gi|115443639|ref|NP_001045599.1| Os02g0102700 [Oryza sativa Japonica Group]
gi|41052905|dbj|BAD07817.1| putative small nuclear ribonucleoprotein polypeptide D3 [Oryza
sativa Japonica Group]
gi|41053239|dbj|BAD08200.1| putative small nuclear ribonucleoprotein polypeptide D3 [Oryza
sativa Japonica Group]
gi|113535130|dbj|BAF07513.1| Os02g0102700 [Oryza sativa Japonica Group]
gi|215692366|dbj|BAG87786.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692586|dbj|BAG88006.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737277|dbj|BAG96206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189864|gb|EEC72291.1| hypothetical protein OsI_05466 [Oryza sativa Indica Group]
gi|222621997|gb|EEE56129.1| hypothetical protein OsJ_05002 [Oryza sativa Japonica Group]
Length = 132
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLDNITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSRVRFMIIPD 77
>gi|308482400|ref|XP_003103403.1| CRE-SNR-1 protein [Caenorhabditis remanei]
gi|308259824|gb|EFP03777.1| CRE-SNR-1 protein [Caenorhabditis remanei]
Length = 152
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E GE Y G L+ + MN L E I T +DG R ++ +I
Sbjct: 6 VPIKILHEAEGHVVTLETVTGEVYRGKLIEAEDNMNCQLSETIVTFRDG-RSHQLENVFI 64
Query: 62 RGNTIK-----YLRVPDEVIDKVQEETKSRSDRKPP---GVGRGRGRGREDGASGRQTKG 113
RGN ++ YL +P I +++ + P +GR + G G +G
Sbjct: 65 RGNKVRFKALLYLELP--YIFQIRFMILPDMLKNAPMFKNIGRAQKGAIGMGLGGIDPRG 122
Query: 114 IGRGLDDGGAKGAGGGRGRGGPGGKP 139
GRG G GG RG PGG P
Sbjct: 123 RGRGTAFRRPMGRGGPRGMSRPGGAP 148
>gi|359491835|ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Vitis
vinifera]
gi|297745546|emb|CBI40711.3| unnamed protein product [Vitis vinifera]
Length = 132
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G+++ C+ N L + T KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLESITFTGKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSKVRFMVIPD 77
>gi|115451821|ref|NP_001049511.1| Os03g0240800 [Oryza sativa Japonica Group]
gi|108707095|gb|ABF94890.1| Small nuclear ribonucleoprotein Sm D3, putative, expressed [Oryza
sativa Japonica Group]
gi|113547982|dbj|BAF11425.1| Os03g0240800 [Oryza sativa Japonica Group]
gi|215686515|dbj|BAG87776.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765251|dbj|BAG86948.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768316|dbj|BAH00545.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSRVRFMIIPD 77
>gi|156402297|ref|XP_001639527.1| predicted protein [Nematostella vectensis]
gi|156226656|gb|EDO47464.1| predicted protein [Nematostella vectensis]
Length = 110
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E NGE Y G L+ + MN + + T++DG R ++ + ++
Sbjct: 5 VPIKILHEAEGHVITLETLNGEVYRGKLIEAEDNMNCQMSNITVTARDG-RVSQLEQVFV 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|328771488|gb|EGF81528.1| hypothetical protein BATDEDRAFT_7518, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 77
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 5 SLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGN 64
LL A GH + +ELK G Y G L+N + MN+ LR++ T+++G R ++ + +IRG+
Sbjct: 1 QLLHEAMGHIVTIELKTGSVYRGKLLNAEDNMNVQLRDITHTARNG-RVSQLTQVFIRGS 59
Query: 65 TIKYLRVPD 73
I+++ VPD
Sbjct: 60 QIRFVIVPD 68
>gi|300175666|emb|CBK20977.2| unnamed protein product [Blastocystis hominis]
Length = 108
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL +G+ ++VEL NGE Y GHLV + MN L V ++DG + ++ YI
Sbjct: 5 VPIKLLHEGEGNTVIVELTNGEKYRGHLVRAEDNMNCQLTNVTMRARDG-KLSKLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ ++Y+ +PD
Sbjct: 64 RGSRVRYVVLPD 75
>gi|406603808|emb|CCH44729.1| putative U6 snRNA-associated Sm-like protein [Wickerhamomyces
ciferrii]
Length = 178
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 13/80 (16%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LPL LL A+G P LVELK+GET NG L D MN+ L +VI TS
Sbjct: 23 LPLYLLTAAKGQPTLVELKSGETINGVLTEIDNLMNLTLTDVIETSP------------- 69
Query: 62 RGNTIKYLRVPDEVIDKVQE 81
+KYLR+P+E+I ++++
Sbjct: 70 VSKDVKYLRLPEELIGEIKQ 89
>gi|290983277|ref|XP_002674355.1| predicted protein [Naegleria gruberi]
gi|284087945|gb|EFC41611.1| predicted protein [Naegleria gruberi]
Length = 134
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+ H + +E K+GE Y G L+ + MN+ L +V T ++G + M YI
Sbjct: 7 IPIKLLHEAESHIISLETKSGELYRGKLIEAEDSMNVQLVDVTVTHRNGQQ-SAMNTVYI 65
Query: 62 RGNTIKYLRVPD 73
RG+ I+Y +PD
Sbjct: 66 RGSKIRYFVLPD 77
>gi|332028142|gb|EGI68193.1| Small nuclear ribonucleoprotein Sm D3 [Acromyrmex echinatior]
Length = 141
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG + ++ YI
Sbjct: 5 VPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG-QVGQLENVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR-GREDGASGR-QTKGIGRGLD 119
RG+ I++L +PD + K+ K PG G+G G GR A R Q +G GRG +
Sbjct: 64 RGSKIRFLILPDML--------KNAPMFKRPG-GKGSGTAGRGKSAILRAQARGRGRGQN 114
Query: 120 DGGAKGAGGG---RGRGGPGGKPGGSRG 144
G KG G + PG +PG RG
Sbjct: 115 QRG-KGTGSAPWLNQQNQPGSQPGRGRG 141
>gi|255726920|ref|XP_002548386.1| small nuclear ribonucleoprotein Sm D3 [Candida tropicalis
MYA-3404]
gi|240134310|gb|EER33865.1| small nuclear ribonucleoprotein Sm D3 [Candida tropicalis
MYA-3404]
Length = 106
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL NG+TY G L+ + MN+ L E T M + +I
Sbjct: 5 IPVRLLNEAQGHVISIELTNGDTYRGKLLENEDNMNLSLYEATVTKGKSGSVEHMDQVFI 64
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ VPD
Sbjct: 65 RGSMIRFVSVPD 76
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LP++LL+ AQG +++ELKNG Y G L CD MN+H+++ + DG +F ++ + +
Sbjct: 187 LPINLLENAQGKTIVLELKNGNKYTGTLEKCDRMMNLHVKDSVLIQPDGKKF-KVAKIIV 245
Query: 62 RGNTIKYLRVPDEVIDK 78
+G ++ V E++ K
Sbjct: 246 KGMAVRCFAVDGELLKK 262
>gi|145495655|ref|XP_001433820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145545630|ref|XP_001458499.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400940|emb|CAK66423.1| unnamed protein product [Paramecium tetraurelia]
gi|124426319|emb|CAK91102.1| unnamed protein product [Paramecium tetraurelia]
Length = 122
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL ++ A H + VELK GE + G++ + MN+ L EV ++DG R + + Y+
Sbjct: 5 VPLKIMHEAAHHIVTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDG-RPMSLEQVYL 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRE 103
RG+ I+++ +PD V K R++ K + + R + R+
Sbjct: 64 RGSQIRFVVIPD-VFKYAPMFKKIRANAKSKNMQQIREKARQ 104
>gi|328351139|emb|CCA37539.1| Calcium-binding mitochondrial carrier protein SCaMC-1-B
[Komagataella pastoris CBS 7435]
Length = 521
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + EL +GE+Y G LV + MNI L++V T++DG +F R P+ +
Sbjct: 5 IPVKLLNEAQGHIISAELTSGESYRGKLVESEDSMNIQLKDVTLTAQDGKKFSRTPQSSM 64
Query: 62 R 62
R
Sbjct: 65 R 65
>gi|307192020|gb|EFN75404.1| Small nuclear ribonucleoprotein Sm D3 [Harpegnathos saltator]
Length = 143
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR-GREDGASGR-QTKGIGRGLD 119
RG+ I++L +PD + K+ K PG G+G G GR A R Q +G GRG
Sbjct: 64 RGSKIRFLILPDML--------KNAPMFKRPG-GKGSGTAGRGKSAILRAQARGRGRGQQ 114
Query: 120 DGGAKGAG 127
KG G
Sbjct: 115 HQRNKGTG 122
>gi|410730161|ref|XP_003671258.2| hypothetical protein NDAI_0G02400 [Naumovozyma dairenensis CBS
421]
gi|401780078|emb|CCD26015.2| hypothetical protein NDAI_0G02400 [Naumovozyma dairenensis CBS
421]
Length = 67
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + VEL GETY G L+ + MNI LR+VI T D + RM ++
Sbjct: 4 IPVKLLNEAQGHIVSVELATGETYRGKLIESEDNMNIQLRDVIVTGTDS-KMTRMDHVFV 62
Query: 62 RG 63
RG
Sbjct: 63 RG 64
>gi|448515433|ref|XP_003867337.1| Smd3 core snRNP protein [Candida orthopsilosis Co 90-125]
gi|380351676|emb|CCG21899.1| Smd3 core snRNP protein [Candida orthopsilosis]
Length = 106
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL NG+TY G L+ + MN L +V T+ M + +I
Sbjct: 5 IPVRLLNEAQGHIITIELTNGDTYRGKLLENEDNMNSSLFDVTITNGRNGSLKHMDQVFI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR 100
RG+ I+++ VPD + K KPP G R R
Sbjct: 65 RGSMIRFVSVPDILRHAPMFYMKPGDKPKPPIRGPPRKR 103
>gi|302796635|ref|XP_002980079.1| hypothetical protein SELMODRAFT_112116 [Selaginella
moellendorffii]
gi|300152306|gb|EFJ18949.1| hypothetical protein SELMODRAFT_112116 [Selaginella
moellendorffii]
Length = 95
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNC-DTWMNIHLREVICTSKDGDRFWRMPECY 60
+P+ LL A+GH + VELK+GE Y G L+ C D W N L + T+KDG + ++ +
Sbjct: 7 IPVKLLHEAEGHVVTVELKSGELYRGTLIECEDNW-NCQLENITYTAKDG-KVSQLEHVF 64
Query: 61 IRGNTIKYLRVPD 73
+RG+ ++++ +PD
Sbjct: 65 VRGSKVRFMIIPD 77
>gi|156550773|ref|XP_001605596.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Nasonia
vitripennis]
Length = 142
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|449302555|gb|EMC98564.1| hypothetical protein BAUCODRAFT_137738 [Baudoinia compniacensis
UAMH 10762]
Length = 116
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VE+ +G+TY G L+ + MN L + T +DG R + YI
Sbjct: 7 IPIKLLNEATGHQVTVEIDSGQTYRGKLIEAEDNMNCQLENINVTQRDG-RVTHLDRVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++ VPD + + ++ R GVG RGR
Sbjct: 66 RGSHVRLFIVPDMLRNAPMFRQRANKGR---GVGLARGRA 102
>gi|325192510|emb|CCA26944.1| small nuclear ribonucleoprotein Sm D3 putative [Albugo laibachii
Nc14]
Length = 112
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P++LL +G + VELKNGE Y GHL + MN L V+ ++++G + ++ + Y+
Sbjct: 7 VPIALLHEGEGRNITVELKNGEIYRGHLEESEDSMNCQLSNVVLSARNGQK-CKLEQVYV 65
Query: 62 RGNTIKYLRVPD 73
RG+ IK++ +P+
Sbjct: 66 RGSQIKFIILPE 77
>gi|125543063|gb|EAY89202.1| hypothetical protein OsI_10698 [Oryza sativa Indica Group]
gi|125585557|gb|EAZ26221.1| hypothetical protein OsJ_10089 [Oryza sativa Japonica Group]
Length = 134
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y G +V C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 66 RGSRVRFMIIPD 77
>gi|331242127|ref|XP_003333710.1| small nuclear ribonucleoprotein D3 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309312700|gb|EFP89291.1| small nuclear ribonucleoprotein D3 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 131
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P LL A GH + VELK G+ Y G L + + +NI L+++ T +DG R ++ + YI
Sbjct: 7 VPTKLLHEALGHVITVELKTGQVYRGKLHDAEDNLNISLKDITVTHRDG-RVTQLDQVYI 65
Query: 62 RGNTIKYLRVPD 73
RG I+ VPD
Sbjct: 66 RGPMIRLYVVPD 77
>gi|145493031|ref|XP_001432512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399624|emb|CAK65115.1| unnamed protein product [Paramecium tetraurelia]
Length = 122
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL ++ A H + VELK GE + G++ + MN+ L EV ++DG R + + Y+
Sbjct: 5 VPLKIMHEAVHHIVTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDG-RPMSLEQVYL 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRE 103
RG+ I+++ +PD V K R++ K + + R + R+
Sbjct: 64 RGSQIRFVVIPD-VFKYAPMFKKIRANAKSKNMQQIREKARQ 104
>gi|452985910|gb|EME85666.1| hypothetical protein MYCFIDRAFT_52885 [Pseudocercospora fijiensis
CIRAD86]
Length = 115
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VE+ +G+TY G L+ + MN L + T +DG R + YI
Sbjct: 7 IPIKLLNEATGHQVTVEIDSGQTYRGRLIEAEDNMNCQLENINVTQRDG-RVTHLDRVYI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++ VPD + + KSR R GVG RGR
Sbjct: 66 RGSHVRLFIVPDML--RNAPMFKSRGTRG-RGVGLARGRA 102
>gi|432888006|ref|XP_004075020.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like, partial
[Oryzias latipes]
Length = 117
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
RG+ I++L +PD + K KS + K G G GRG+ A G
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKAAILKAQG 107
>gi|340729743|ref|XP_003403155.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Bombus
terrestris]
gi|350411432|ref|XP_003489349.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Bombus
impatiens]
Length = 142
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHTITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG-REAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|397638104|gb|EJK72932.1| hypothetical protein THAOC_05490 [Thalassiosira oceanica]
Length = 112
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+G + VE+K+GE Y G L+N + MN+ L EV+ T ++G + + Y+
Sbjct: 6 IPIKLLYEAEGMKVTVEMKSGEIYRGLLLNAEDTMNMTLSEVVRTGRNG-QVTKHSTVYL 64
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ +PD
Sbjct: 65 RGSGIRFIALPD 76
>gi|343427423|emb|CBQ70950.1| related to small nuclear ribonucleoprotein sm d3 [Sporisorium
reilianum SRZ2]
Length = 136
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ L+ A GH + VELK G Y G L + + NI ++++ T+ DG + + YI
Sbjct: 6 IPVKLIHEAVGHVITVELKGGAAYRGTLYDAEDNFNIAMKDITVTAPDGKQ-SHLENVYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RGN ++++ VPD + + + K G+G RGR
Sbjct: 65 RGNMLRFIIVPDMLQQAPMFKRIGPNGMKGRGIGSARGRA 104
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ L+ A GH + VELK G Y G L + + NI ++++ T+ DG + + YI
Sbjct: 6 IPVKLIHEAVGHVITVELKGGAAYRGTLYDAEDNFNIAMKDITVTAPDGKQS-HLENVYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RGN ++++ VPD + + + K G+G RGR
Sbjct: 65 RGNMLRFIIVPDMLQQAPMFKRIGPNAMKGRGIGSARGRA 104
>gi|147809809|emb|CAN60390.1| hypothetical protein VITISV_006493 [Vitis vinifera]
Length = 133
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNC-DTWMNIHLREVICTSKDGDRFWRMPECY 60
+P+ LL A GH + VELK+GE Y G ++ C D W N L + T KDG + ++ +
Sbjct: 8 IPVKLLHEAAGHVVXVELKSGELYRGSMIECKDNW-NCQLENITFTVKDG-KVSQLEHVF 65
Query: 61 IRGNTIKYLRVPD 73
IRG ++++ +PD
Sbjct: 66 IRGIKVRFMVIPD 78
>gi|238231831|ref|NP_001154102.1| Small nuclear ribonucleoprotein Sm D3 [Oncorhynchus mykiss]
gi|209734524|gb|ACI68131.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
gi|225704048|gb|ACO07870.1| Small nuclear ribonucleoprotein Sm D3 [Oncorhynchus mykiss]
Length = 128
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKILHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTHRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGTGAGRGKA 100
>gi|328866082|gb|EGG14468.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 170
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A H + +ELKNGE Y G L+ + MN L+ V T++DG + ++ + YI
Sbjct: 5 VPVKILHEADSHIVTIELKNGEMYRGTLMQSEDNMNCKLKIVTMTARDGKQ-SQLEQIYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ +PD
Sbjct: 64 RGSKIRFIILPD 75
>gi|328856039|gb|EGG05162.1| hypothetical protein MELLADRAFT_48913 [Melampsora larici-populina
98AG31]
Length = 138
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P LL A GH + VELK G+ Y G L + + +NI L+++ T +DG R ++ + YI
Sbjct: 7 VPTKLLHEALGHVITVELKTGQVYRGKLHDAEDNLNISLKDITVTHRDG-RVTQLDQVYI 65
Query: 62 RGNTIKYLRVPD 73
RG I+ +PD
Sbjct: 66 RGPMIRLYVIPD 77
>gi|19172997|ref|NP_597548.1| U6 snRNA ASSOCIATED SM-LIKE PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|19168664|emb|CAD26183.1| U6 snRNA ASSOCIATED SM-LIKE PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|449329730|gb|AGE96000.1| U6 snRNA associated sm-like protein [Encephalitozoon cuniculi]
Length = 88
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M PL+LL+ ++ + +ELKN + G L CD MN+HL+ V +DG + + ECY
Sbjct: 1 MYPLTLLRISRNRIVELELKNNDQLRGLLHKCDMAMNLHLKSVTIQKEDGSSIF-INECY 59
Query: 61 IRGNTIKYLRVPDEVIDKVQEETKS 85
++G +I+ +++ +++ + +EE S
Sbjct: 60 LKGTSIRLVKLESKILLEQREECVS 84
>gi|167393456|ref|XP_001740583.1| small nuclear ribonucleoprotein sm [Entamoeba dispar SAW760]
gi|165895275|gb|EDR23007.1| small nuclear ribonucleoprotein sm, putative [Entamoeba dispar
SAW760]
Length = 81
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LP++LL+ +QG + +ELKNG Y G L CD MNIHL+ + +GDRF + +
Sbjct: 2 VLPINLLENSQGTSVTLELKNGFKYTGTLDRCDRMMNIHLKNAVLIKPNGDRF-SVAKLI 60
Query: 61 IRGNTIKYLRVPDEVIDK 78
++G +I+ V + ++ K
Sbjct: 61 VKGISIRCFSVDESLLKK 78
>gi|145510771|ref|XP_001441315.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408561|emb|CAK73918.1| unnamed protein product [Paramecium tetraurelia]
Length = 363
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL ++ A H + VELK GE + G++ + MN+ L EV ++DG R + + Y+
Sbjct: 5 VPLKIMHEAVHHIVTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDG-RPMSLEQVYL 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRE 103
RG+ I+++ +PD V K R++ K + + R + R+
Sbjct: 64 RGSQIRFVVIPD-VFKYAPMFKKIRANAKSKNMQQIREKARQ 104
>gi|110758613|ref|XP_001120143.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Apis mellifera]
gi|380017261|ref|XP_003692578.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like isoform 1
[Apis florea]
gi|380017263|ref|XP_003692579.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like isoform 2
[Apis florea]
Length = 142
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG ++ YI
Sbjct: 5 VPIKVLHEAEGHTITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDGHEV-QLENVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ I++L +PD + K+ K PG G+ G +GR I R G
Sbjct: 64 RGSKIRFLILPDML--------KNAPMFKRPG-------GKGSGTAGRGKSAILRAQARG 108
Query: 122 GAKGAGG-GRGRGGP-----GGKPGGSRGG 145
+G GRG G +PGGS+ G
Sbjct: 109 RGRGQNQRGRGTGSAPWLNQQNQPGGSQAG 138
>gi|401825621|ref|XP_003886905.1| U6 snRNA associated Sm-like protein [Encephalitozoon hellem ATCC
50504]
gi|392998062|gb|AFM97924.1| U6 snRNA associated Sm-like protein [Encephalitozoon hellem ATCC
50504]
Length = 87
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M PL+LL+ ++ + +ELKN + G L CD MN+HL+ +DG + + ECY
Sbjct: 1 MYPLTLLRISRNKIVELELKNNDQLRGLLYKCDMAMNLHLKSATIQKEDGTSVF-INECY 59
Query: 61 IRGNTIKYLRVPDEVIDKVQEE 82
++G +IK +++ +++ + +EE
Sbjct: 60 LKGTSIKLVKLESKILLEQKEE 81
>gi|255731564|ref|XP_002550706.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131715|gb|EER31274.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 96
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 36 MNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET 83
MN+ L VI T+ +GD F ++PE YIRG IKYLR+PD+++ +E++
Sbjct: 1 MNLTLHNVIQTNSNGDEFTKIPEIYIRGMHIKYLRIPDDIMSYAKEQS 48
>gi|67601489|ref|XP_666403.1| aspartyl protease-like [Cryptosporidium hominis TU502]
gi|54657392|gb|EAL36172.1| aspartyl protease-like [Cryptosporidium hominis]
Length = 128
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL LL GH + +ELK+G+ Y G L + + MN L V T +DG + + +CY+
Sbjct: 5 IPLKLLYEGLGHIVTIELKSGDLYRGTLTHVEDNMNCMLEHVNATMRDG-KPVSLEQCYL 63
Query: 62 RGNTIKYLRVPDEV----IDKVQEETKSRSD------RKPPGVGRGRGRGREDGASGR 109
RG+ I++ +PD + + K+ K+R+ K R RG G SGR
Sbjct: 64 RGSQIRFCILPDMLKNAPMFKLAANAKNRASVLGAAGNKKAFAARFISRGTSRGRSGR 121
>gi|147822390|emb|CAN59901.1| hypothetical protein VITISV_002889 [Vitis vinifera]
Length = 116
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G ++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ + +L +PD + + + + +R K +G GRGR
Sbjct: 66 RGSKVPWL-IPDMLKNAPMFKRLDARVKGKGSALGVGRGRA 105
>gi|440901202|gb|ELR52187.1| Small nuclear ribonucleoprotein Sm D3, partial [Bos grunniens
mutus]
Length = 107
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
RG+ I++L +PD + K KS + K G G GRG+ A G
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKAAILKAQG 107
>gi|298714042|emb|CBJ27274.1| Small nuclear ribonucleoprotein-associated protein D3 [Ectocarpus
siliculosus]
Length = 113
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL +GH + VE+KNGE Y GHL + MN + V T +DG R ++ + Y+
Sbjct: 6 VPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDG-RVSKLEQVYL 64
Query: 62 RGNTIKYLRVPD 73
RG+ IK + +PD
Sbjct: 65 RGSHIKLVVLPD 76
>gi|67481025|ref|XP_655862.1| LSM domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|56473016|gb|EAL50464.1| LSM domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|449704561|gb|EMD44781.1| LSM domain containing protein [Entamoeba histolytica KU27]
Length = 81
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
+LP++LL+ +QG + +ELKNG Y G L CD MNIHL+ I GDRF + +
Sbjct: 2 VLPINLLENSQGTSVTLELKNGFKYTGILDRCDRMMNIHLKNAILIKPSGDRF-SVSKLI 60
Query: 61 IRGNTIKYLRVPDEVIDK 78
++G +I+ V + ++ K
Sbjct: 61 VKGISIRCFSVDESLLKK 78
>gi|354547206|emb|CCE43940.1| hypothetical protein CPAR2_501650 [Candida parapsilosis]
Length = 106
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL NG+TY G L+ + MN L +V T+ M + ++
Sbjct: 5 IPVRLLNEAQGHIITIELTNGDTYRGKLLENEDNMNASLFDVTITNGRNGSSKHMDQVFV 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR 100
RG+ I+++ VPD + K KPP G R R
Sbjct: 65 RGSMIRFVSVPDILRHAPMFYMKPGDKPKPPIRGPPRKR 103
>gi|209730588|gb|ACI66163.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
Length = 119
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKILHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTHRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
RG+ I++L +PD + K KS + K G G GRG+ A G
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGTGAGRGKAAILKAQG 107
>gi|391342640|ref|XP_003745624.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Metaseiulus
occidentalis]
Length = 138
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G LV + MN H++ + T +DG ++ YI
Sbjct: 5 VPIKVLHEAEGHIITCETNTGEVYRGKLVEAEDNMNCHMQGITVTYRDGST-SQLENVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPG----VGRGRGRGR 102
RG+ I++L +PD + + +KPPG G GRG+
Sbjct: 64 RGSKIRFLILPDML-------KNAPMFKKPPGKGMQTGAAAGRGK 101
>gi|383853962|ref|XP_003702491.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Megachile
rotundata]
Length = 142
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG-REVELENVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ I++L +PD + K+ K PG G+ G +GR I R G
Sbjct: 64 RGSKIRFLILPDML--------KNAPMFKRPG-------GKGSGTAGRGKSAILRAQARG 108
Query: 122 GAKGAGG-GRGRGGP-----GGKPGGSRGG 145
+G GRG G +PGGS+ G
Sbjct: 109 RGRGQNQRGRGTGSAPWLNQQNQPGGSQAG 138
>gi|444708595|gb|ELW49650.1| Small nuclear ribonucleoprotein Sm D3 [Tupaia chinensis]
Length = 112
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKA 100
>gi|221131194|ref|XP_002165640.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Hydra
magnipapillata]
Length = 130
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E GE Y G L+ + MN L + T++DG + ++ + +I
Sbjct: 7 VPIKVLHEAEGHIVTLETLTGEVYRGKLLEAEDNMNCQLTHITMTARDG-KVAQLEQIFI 65
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
RG+ I+++ +PD ++ K +K GVGRG+
Sbjct: 66 RGSKIRFVILPD-MLKNAPMFKKMLVSQKNTGVGRGKS 102
>gi|357113192|ref|XP_003558388.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein Sm
D3-like [Brachypodium distachyon]
Length = 132
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK GE Y ++ C+ N L + T+KDG + ++ +I
Sbjct: 7 IPVKLLHEAAGHVVTVELKTGEVYRXSMLECEDNWNCQLENISFTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIKYLRVPDEVIDK-VQEETKSRSDRKPPGVGRGRGRG 101
RG+ ++++ +PD + + + + ++R K +G GRG
Sbjct: 66 RGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGVGRGHA 106
>gi|332376959|gb|AEE63619.1| unknown [Dendroctonus ponderosae]
Length = 138
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN L ++ T +DG R ++ YI
Sbjct: 5 VPIKVLHDAEGHIVTCETITGEVYRGKLIEAEDNMNCQLTQITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|270008821|gb|EFA05269.1| hypothetical protein TcasGA2_TC015424 [Tribolium castaneum]
Length = 152
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|148227688|ref|NP_001079359.1| uncharacterized protein LOC379046 [Xenopus laevis]
gi|27371312|gb|AAH40973.1| MGC52856 protein [Xenopus laevis]
gi|133736997|gb|AAI33764.1| MGC52856 protein [Xenopus laevis]
Length = 126
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKA 100
>gi|440790083|gb|ELR11371.1| LSM domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 136
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ + A+GH + +ELK GE Y G L + + MN + + T++DG R + + YI
Sbjct: 5 IPIKVFHEAKGHTVTIELKTGEVYRGQLGDTEDNMNCQMANIQYTARDG-RVTNLEQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ +PD
Sbjct: 64 RGSKIRFMILPD 75
>gi|354492024|ref|XP_003508152.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cricetulus
griseus]
Length = 126
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGR 109
RG+ I++L +PD + K KS + K G G GRG+ A G+
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKAAILKAQGK 108
>gi|47211785|emb|CAF93753.1| unnamed protein product [Tetraodon nigroviridis]
Length = 127
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKA 100
>gi|348513729|ref|XP_003444394.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Oreochromis
niloticus]
Length = 127
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKA 100
>gi|4759160|ref|NP_004166.1| small nuclear ribonucleoprotein Sm D3 [Homo sapiens]
gi|13385598|ref|NP_080371.1| small nuclear ribonucleoprotein Sm D3 [Mus musculus]
gi|56119060|ref|NP_001007839.1| small nuclear ribonucleoprotein Sm D3 [Gallus gallus]
gi|62859245|ref|NP_001017093.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Xenopus
(Silurana) tropicalis]
gi|148230601|ref|NP_001084936.1| small nuclear ribonucleoprotein Sm D3 [Xenopus laevis]
gi|302563765|ref|NP_001180981.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|343478171|ref|NP_001230355.1| small nuclear ribonucleoprotein Sm D3 [Sus scrofa]
gi|73995845|ref|XP_849660.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Canis lupus
familiaris]
gi|109093572|ref|XP_001096170.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like isoform 1
[Macaca mulatta]
gi|109509970|ref|XP_001079870.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Rattus
norvegicus]
gi|126344584|ref|XP_001362481.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Monodelphis
domestica]
gi|149632566|ref|XP_001509901.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like
[Ornithorhynchus anatinus]
gi|149720126|ref|XP_001489110.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Equus
caballus]
gi|291412675|ref|XP_002722599.1| PREDICTED: small nuclear ribonucleoprotein polypeptide D3
[Oryctolagus cuniculus]
gi|296191500|ref|XP_002743645.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Callithrix
jacchus]
gi|297708452|ref|XP_002830980.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 1 [Pongo
abelii]
gi|301779389|ref|XP_002925102.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Ailuropoda
melanoleuca]
gi|332263674|ref|XP_003280877.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Nomascus
leucogenys]
gi|344294995|ref|XP_003419200.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Loxodonta
africana]
gi|348584590|ref|XP_003478055.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cavia
porcellus]
gi|392355294|ref|XP_003751996.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Rattus
norvegicus]
gi|395753126|ref|XP_003779546.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 2 [Pongo
abelii]
gi|395753128|ref|XP_003779547.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 3 [Pongo
abelii]
gi|395861839|ref|XP_003803182.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Otolemur
garnettii]
gi|397469575|ref|XP_003806425.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Pan paniscus]
gi|410055702|ref|XP_003953897.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 1 [Pan
troglodytes]
gi|410055704|ref|XP_003953898.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 2 [Pan
troglodytes]
gi|410976969|ref|XP_003994885.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Felis catus]
gi|426247570|ref|XP_004017554.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Ovis aries]
gi|426393867|ref|XP_004063231.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Gorilla gorilla
gorilla]
gi|51338667|sp|P62318.1|SMD3_HUMAN RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|54039609|sp|P62323.1|SMD3_XENLA RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|61246343|sp|P62320.1|SMD3_MOUSE RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|315583600|pdb|3PGW|Z Chain Z, Crystal Structure Of Human U1 Snrnp
gi|315583609|pdb|3PGW|W Chain W, Crystal Structure Of Human U1 Snrnp
gi|332639436|pdb|2Y9A|D Chain D, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639443|pdb|2Y9A|K Chain K, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639450|pdb|2Y9A|R Chain R, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639460|pdb|2Y9B|D Chain D, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639467|pdb|2Y9B|K Chain K, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639474|pdb|2Y9B|R Chain R, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639484|pdb|2Y9C|D Chain D, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639491|pdb|2Y9C|K Chain K, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639498|pdb|2Y9C|R Chain R, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639508|pdb|2Y9D|D Chain D, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639515|pdb|2Y9D|K Chain K, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639522|pdb|2Y9D|R Chain R, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|600750|gb|AAA57034.1| Sm D3 [Homo sapiens]
gi|12653375|gb|AAH00457.1| Small nuclear ribonucleoprotein D3 polypeptide 18kDa [Homo sapiens]
gi|12837822|dbj|BAB23963.1| unnamed protein product [Mus musculus]
gi|12839911|dbj|BAB24705.1| unnamed protein product [Mus musculus]
gi|12859667|dbj|BAB31729.1| unnamed protein product [Mus musculus]
gi|13111955|gb|AAH03150.1| Small nuclear ribonucleoprotein D3 polypeptide 18kDa [Homo sapiens]
gi|47122949|gb|AAH70616.1| MGC81359 protein [Xenopus laevis]
gi|47678697|emb|CAG30469.1| SNRPD3 [Homo sapiens]
gi|53130412|emb|CAG31535.1| hypothetical protein RCJMB04_7j2 [Gallus gallus]
gi|74227850|dbj|BAE35738.1| unnamed protein product [Mus musculus]
gi|89266931|emb|CAJ81806.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Xenopus
(Silurana) tropicalis]
gi|90085617|dbj|BAE91549.1| unnamed protein product [Macaca fascicularis]
gi|109451504|emb|CAK54613.1| SNRPD3 [synthetic construct]
gi|109452100|emb|CAK54912.1| SNRPD3 [synthetic construct]
gi|119580074|gb|EAW59670.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Homo sapiens]
gi|148699966|gb|EDL31913.1| small nuclear ribonucleoprotein D3, isoform CRA_b [Mus musculus]
gi|149043764|gb|EDL97215.1| rCG60635, isoform CRA_b [Rattus norvegicus]
gi|170285144|gb|AAI61305.1| hypothetical protein LOC549847 [Xenopus (Silurana) tropicalis]
gi|197129341|gb|ACH45839.1| putative small nuclear ribonucleoprotein D3 polypeptide 18 kDa
variant 2 [Taeniopygia guttata]
gi|197129342|gb|ACH45840.1| putative small nuclear ribonucleoprotein D3 polypeptide 18 kDa
variant 2 [Taeniopygia guttata]
gi|197129343|gb|ACH45841.1| putative small nuclear ribonucleoprotein D3 polypeptide 18 kDa
variant 2 [Taeniopygia guttata]
gi|197692199|dbj|BAG70063.1| small nuclear ribonucleoprotein polypeptide D3 [Homo sapiens]
gi|197692447|dbj|BAG70187.1| small nuclear ribonucleoprotein polypeptide D3 [Homo sapiens]
gi|208965532|dbj|BAG72780.1| small nuclear ribonucleoprotein D3 polypeptide [synthetic
construct]
gi|296478296|tpg|DAA20411.1| TPA: small nuclear ribonucleoprotein D3 polypeptide 18kDa [Bos
taurus]
gi|355563528|gb|EHH20090.1| hypothetical protein EGK_02876 [Macaca mulatta]
gi|355784846|gb|EHH65697.1| hypothetical protein EGM_02515 [Macaca fascicularis]
gi|380815844|gb|AFE79796.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|380815846|gb|AFE79797.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|380815848|gb|AFE79798.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|380815850|gb|AFE79799.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|380815852|gb|AFE79800.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|383420997|gb|AFH33712.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|384940658|gb|AFI33934.1| small nuclear ribonucleoprotein Sm D3 [Macaca mulatta]
gi|387018114|gb|AFJ51175.1| Small nuclear ribonucleoprotein D3 polypeptide [Crotalus
adamanteus]
gi|410211528|gb|JAA02983.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Pan
troglodytes]
gi|410264204|gb|JAA20068.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Pan
troglodytes]
gi|410264206|gb|JAA20069.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Pan
troglodytes]
gi|410302836|gb|JAA30018.1| small nuclear ribonucleoprotein D3 polypeptide 18kDa [Pan
troglodytes]
gi|417395981|gb|JAA45024.1| Putative small nuclear ribonucleoprotein sm d3 [Desmodus rotundus]
gi|432095017|gb|ELK26406.1| Small nuclear ribonucleoprotein Sm D3 [Myotis davidii]
gi|449281570|gb|EMC88617.1| Small nuclear ribonucleoprotein Sm D3 [Columba livia]
Length = 126
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKA 100
>gi|410932149|ref|XP_003979456.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like, partial
[Takifugu rubripes]
gi|281343886|gb|EFB19470.1| hypothetical protein PANDA_014546 [Ailuropoda melanoleuca]
Length = 106
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKA 100
>gi|322787518|gb|EFZ13606.1| hypothetical protein SINV_14465 [Solenopsis invicta]
Length = 115
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG R ++ YI
Sbjct: 15 VPIKVLHEAEGHTITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG-RVAQLENVYI 73
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 74 RGSKIRFLILPD 85
>gi|307185014|gb|EFN71243.1| Small nuclear ribonucleoprotein Sm D3 [Camponotus floridanus]
Length = 142
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG + ++ YI
Sbjct: 5 VPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG-QVGQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|332028955|gb|EGI68973.1| Small nuclear ribonucleoprotein Sm D3 [Acromyrmex echinatior]
Length = 142
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN ++ + T +DG + ++ YI
Sbjct: 5 VPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDG-QVGQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|307109545|gb|EFN57783.1| hypothetical protein CHLNCDRAFT_143127 [Chlorella variabilis]
Length = 126
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH VELK+GE Y G + + N+ L V T +DG + M +I
Sbjct: 14 VPIKLLHEATGHVCTVELKSGEIYRGEMYEAEDNWNVQLSNVQATGRDG-KVTHMEHIFI 72
Query: 62 RGNTIKYLRVPDEV-----IDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGR 116
RG ++++ VPD + ++ + K +S GVG GRGR D R + +GR
Sbjct: 73 RGGRVRFVIVPDMLKNAPMFKRIDPKNKMKS--AVLGVG-GRGRAVAD----RANRNVGR 125
>gi|66362186|ref|XP_628057.1| small nucealr riboprotein SMD3, SM domain [Cryptosporidium parvum
Iowa II]
gi|46227630|gb|EAK88565.1| small nucealr riboprotein SMD3, SM domain [Cryptosporidium parvum
Iowa II]
Length = 143
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+PL LL GH + +ELK+G+ Y G L + + MN L V T +DG + +CY+
Sbjct: 27 IPLKLLYEGLGHIVTIELKSGDLYRGTLTHVEDNMNCMLEHVNATMRDGKP-VSLEQCYL 85
Query: 62 RGNTIKYLRVPDEV----IDKVQEETKSRSD------RKPPGVGRGRGRGREDGASGR 109
RG+ I++ +PD + + K+ K+R+ K R RG G SGR
Sbjct: 86 RGSQIRFCILPDMLKNAPMFKLAANAKNRASVLGAAGNKKAFAARFISRGTSRGRSGR 143
>gi|209732182|gb|ACI66960.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
Length = 128
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKILHEAEGHIVTGETNTGEVYRGKLIGAEDNMNCQMSNITVTHRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGTGAGRGKA 100
>gi|401411081|ref|XP_003884988.1| hypothetical protein NCLIV_053870 [Neospora caninum Liverpool]
gi|325119407|emb|CBZ54960.1| hypothetical protein NCLIV_053870 [Neospora caninum Liverpool]
Length = 132
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
P+ LL GH + VE+K+GE Y G L N + MN L+ V T +DG R + + YIR
Sbjct: 7 PVKLLYEGLGHTVTVEIKSGEVYRGVLENAEDNMNCLLQTVTVTHRDG-RVVSLEQVYIR 65
Query: 63 GNTIKYLRVPD 73
G+ +K++ PD
Sbjct: 66 GSQVKFIVFPD 76
>gi|237829847|ref|XP_002364221.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211961885|gb|EEA97080.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221487294|gb|EEE25526.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii GT1]
gi|221507086|gb|EEE32690.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii VEG]
Length = 131
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
P+ LL GH + VE+K+GE Y G L N + MN L+ V T +DG R + + YIR
Sbjct: 7 PVKLLYEGLGHTVTVEIKSGEVYRGVLENAEDNMNCLLQTVTVTHRDG-RVVSLEQVYIR 65
Query: 63 GNTIKYLRVPD 73
G+ +K++ PD
Sbjct: 66 GSQVKFIVFPD 76
>gi|324540294|gb|ADY49583.1| Small nuclear ribonucleoprotein Sm D3, partial [Ascaris suum]
Length = 143
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E GE Y G L+ + MN + +V T +DG R ++ +I
Sbjct: 6 VPIKILHEAEGHIVTLETTIGEVYRGKLIEAEDNMNCQMSDVNVTYRDG-RTHQLDNVFI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQT 111
RG+ I+++ +PD + + + R+ + G+G G R GR T
Sbjct: 65 RGSKIRFMILPDMLKNAPMFKNIGRAQKGAVGMGMGDNRDGRAAFRGRGT 114
>gi|15079335|gb|AAH11510.1| Small nuclear ribonucleoprotein D3 [Mus musculus]
Length = 126
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGRKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKA 100
>gi|395753131|ref|XP_003779548.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 isoform 4 [Pongo
abelii]
Length = 120
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
RG+ I++L +PD + K KS + K G G GRG+ A G
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKAAILKAQG 107
>gi|170574009|ref|XP_001892634.1| small nuclear ribonucleoprotein Sm D3 [Brugia malayi]
gi|170579971|ref|XP_001895061.1| small nuclear ribonucleoprotein Sm D3 [Brugia malayi]
gi|312076574|ref|XP_003140922.1| small nuclear ribonucleoprotein Sm D3 [Loa loa]
gi|158598127|gb|EDP36091.1| small nuclear ribonucleoprotein Sm D3, putative [Brugia malayi]
gi|158601689|gb|EDP38531.1| small nuclear ribonucleoprotein Sm D3, putative [Brugia malayi]
gi|307763915|gb|EFO23149.1| small nuclear ribonucleoprotein Sm D3 [Loa loa]
gi|402590446|gb|EJW84376.1| small nuclear ribonucleoprotein Sm D3 [Wuchereria bancrofti]
Length = 138
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E GE Y G L + MN + EV T +DG R + +I
Sbjct: 6 VPIKILHEAEGHVITLETTIGEVYRGKLNEAEDNMNCQMSEVTVTYRDG-RTHHLDNVFI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRG 97
RG+ I+++ +PD + + + R+ + G+G G
Sbjct: 65 RGSKIRFMILPDMLKNAPMFKNIGRAQKGAVGMGMG 100
>gi|351701822|gb|EHB04741.1| Small nuclear ribonucleoprotein Sm D3, partial [Heterocephalus
glaber]
Length = 136
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
RG+ I++L +PD + K KS + K G G GRG+ A G
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKAAILKAQG 107
>gi|126133653|ref|XP_001383351.1| hypothetical protein PICST_13887 [Scheffersomyces stipitis CBS
6054]
gi|126095500|gb|ABN65322.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 97
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL G+TY G L+ + MN+ L +V+ T M + ++
Sbjct: 3 IPVRLLNEAQGHVISLELTTGDTYRGKLLENEDNMNLSLYDVVITKGRTGATSYMNQVFV 62
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
RG+ I+++ VPD + + K KPP
Sbjct: 63 RGSMIRFITVPDILKNAPMFFMKPGDKPKPP 93
>gi|194382308|dbj|BAG58909.1| unnamed protein product [Homo sapiens]
Length = 120
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
RG+ I++L +PD + K KS + K G G GRG+ A G
Sbjct: 64 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKAAILKAQG 107
>gi|167378504|ref|XP_001734822.1| small nuclear ribonucleoprotein Sm D3 [Entamoeba dispar SAW760]
gi|165903473|gb|EDR29003.1| small nuclear ribonucleoprotein Sm D3, putative [Entamoeba dispar
SAW760]
Length = 111
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
PL + ++G + +E+K GETY G +V + MN LR+V T+KDG + R +IR
Sbjct: 6 PLKIFHESKGTIVTIEVKTGETYRGRMVETEDNMNCQLRDVTITAKDGSQ-SRTEYIFIR 64
Query: 63 GNTIKYLRVPD 73
GN ++++ +P+
Sbjct: 65 GNQVRFVVLPE 75
>gi|407038001|gb|EKE38889.1| LSM domain containing protein [Entamoeba nuttalli P19]
Length = 111
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
PL + ++G + +E+K GETY G +V + MN LR+V T+KDG + R +IR
Sbjct: 6 PLKIFHESKGTIVTIEVKTGETYRGRMVETEDNMNCQLRDVTITAKDGSQ-SRTEYIFIR 64
Query: 63 GNTIKYLRVPD 73
GN ++++ +P+
Sbjct: 65 GNQVRFVVLPE 75
>gi|67476256|ref|XP_653731.1| small nuclear ribonucleoprotein [Entamoeba histolytica HM-1:IMSS]
gi|56470719|gb|EAL48353.1| small nuclear ribonucleoprotein, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709025|gb|EMD48372.1| small nuclear ribonucleoprotein, putative [Entamoeba histolytica
KU27]
Length = 111
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
PL + ++G + +E+K GETY G +V + MN LR+V T+KDG + R +IR
Sbjct: 6 PLKIFHESKGTIVTIEVKTGETYRGRMVETEDNMNCQLRDVTITAKDGSQ-SRTEYIFIR 64
Query: 63 GNTIKYLRVPD 73
GN ++++ +P+
Sbjct: 65 GNQVRFVVLPE 75
>gi|225734040|pdb|3CW1|D Chain D, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734049|pdb|3CW1|S Chain S, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734058|pdb|3CW1|T Chain T, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734067|pdb|3CW1|U Chain U, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 126
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG I++L +PD + K KS + K G G GRG+
Sbjct: 64 RGCKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKA 100
>gi|322706526|gb|EFY98106.1| small nuclear ribonucleoprotein Sm D3 [Metarhizium anisopliae ARSEF
23]
Length = 137
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 28/124 (22%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVN--------------CDTW----------MN 37
+P+ LL AQGH + +E+ +G+TY G L++ C MN
Sbjct: 7 IPIKLLNEAQGHIVTLEITSGQTYRGKLLDGTPPLGPLPRNIRTCRVLVLTSRLAEDNMN 66
Query: 38 IHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRG 97
+ L+++ T++DG R + + YIRG+ +++ VPD + + +++ R GVG
Sbjct: 67 VQLKDITVTARDG-RVSHLEQVYIRGSHVRFFIVPDMLRNAPMFRSRNLRGR---GVGLA 122
Query: 98 RGRG 101
RGR
Sbjct: 123 RGRA 126
>gi|291235317|ref|XP_002737590.1| PREDICTED: small nuclear ribonucleoprotein polypeptide D3-like
[Saccoglossus kowalevskii]
Length = 123
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E +GE Y G L+ + MN + + T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHIITCETSSGEVYRGKLIEAEDNMNCQMANITVTYRDG-RVSQLEHVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|281201849|gb|EFA76057.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 351
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 28/134 (20%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A H + +EL+NG+ Y G L+ + MN + + T+K+G + ++ + YI
Sbjct: 74 IPVKILHEADSHVITLELRNGDLYRGTLIESEDNMNCRMENITMTAKNGKQ-TQIEQIYI 132
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDG 121
RG+ I++ +PD + + P R GR G S GIGR +
Sbjct: 133 RGSKIRFFILPDML-------------KNAPMFKRIDGRTVLRGKS----LGIGRSV--- 172
Query: 122 GAKGAGGGRGRGGP 135
GR RGGP
Sbjct: 173 -------GRARGGP 179
>gi|115497280|ref|NP_001069947.1| small nuclear ribonucleoprotein Sm D3 [Bos taurus]
gi|86437979|gb|AAI12525.1| Small nuclear ribonucleoprotein D3 polypeptide 18kDa [Bos taurus]
Length = 125
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG--LAQLEQVYI 62
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
RG+ I++L +PD + K KS + K G G GRG+
Sbjct: 63 RGSKIRFLILPDML--KNAPMLKSMKN-KNQGSGAGRGKA 99
>gi|241690470|ref|XP_002411764.1| small nuclear ribonucleoprotein Sm D3, putative [Ixodes
scapularis]
gi|215504603|gb|EEC14097.1| small nuclear ribonucleoprotein Sm D3, putative [Ixodes
scapularis]
Length = 122
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G LV + MN + + T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLVEAEDNMNCQMANITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|255081394|ref|XP_002507919.1| predicted protein [Micromonas sp. RCC299]
gi|226523195|gb|ACO69177.1| predicted protein [Micromonas sp. RCC299]
Length = 123
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+GH + +ELK G+TY G L+ + N L + T +DG R ++ Y+
Sbjct: 11 IPVKLLHEAEGHTVTIELKTGDTYRGTLLEAEDNWNCQLEGITHTGRDG-RVNQLENVYV 69
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 70 RGSKIRFLIIPD 81
>gi|119605094|gb|EAW84688.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_c [Homo sapiens]
Length = 84
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 56 MPECYIRGNTIKYLRVPDEVIDKVQEETKSR 86
MPECYIRG+TIKYLR+PDE+ID V+EE ++
Sbjct: 1 MPECYIRGSTIKYLRIPDEIIDMVKEEVVAK 31
>gi|357631535|gb|EHJ79005.1| hypothetical protein KGM_15381 [Danaus plexippus]
Length = 130
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + V T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|149237821|ref|XP_001524787.1| small nuclear ribonucleoprotein Sm D3 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146451384|gb|EDK45640.1| small nuclear ribonucleoprotein Sm D3 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 106
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +E+ NG+ Y G L+ + MN L +V T+ M + +I
Sbjct: 5 IPVRLLNEAQGHIVSIEVNNGDVYRGKLLENEDNMNSSLYDVTITNGKNGSVKHMEQVFI 64
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ VPD
Sbjct: 65 RGSMIRFISVPD 76
>gi|346472269|gb|AEO35979.1| hypothetical protein [Amblyomma maculatum]
Length = 122
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G LV + MN + + T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHVVTCETNTGEVYRGKLVEAEDNMNCQMANITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ +PD
Sbjct: 64 RGSKIRFMILPD 75
>gi|146415963|ref|XP_001483951.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
gi|146391076|gb|EDK39234.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 106
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL G+TY G L+ + MN+ L +V+ T M + ++
Sbjct: 5 IPVKLLNEAQGHVVSLELVTGDTYRGKLLENEDNMNLSLYDVVVTKGRTGATTHMNQVFV 64
Query: 62 RGNTIKYLRVPD 73
RG+ I+Y+ VP+
Sbjct: 65 RGSMIRYISVPE 76
>gi|326428074|gb|EGD73644.1| LSM domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 112
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE-- 58
ML S KT G ++VELKN + G L + D ++NI L ++ T + D++ M
Sbjct: 18 MLFTSFFKTLVGKTVVVELKNDLSIQGTLTSVDQFLNIKLDDI--TVGNVDKYAHMVSVK 75
Query: 59 -CYIRGNTIKYLRVPDEVID 77
C+IRG+ I+Y+++P E +D
Sbjct: 76 NCFIRGSVIRYIQLPPEHVD 95
>gi|443687679|gb|ELT90579.1| hypothetical protein CAPTEDRAFT_221674 [Capitella teleta]
Length = 135
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E +GE Y G LV + MN + + T +DG R ++ +I
Sbjct: 5 VPIKVLHEAEGHIVTCETTSGEVYRGKLVEAEDNMNCQMANITVTYRDG-RVAQLENVFI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|313234834|emb|CBY24778.1| unnamed protein product [Oikopleura dioica]
gi|313246057|emb|CBY35020.1| unnamed protein product [Oikopleura dioica]
Length = 99
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD-RFWRMPEC 59
ML S K+ G + VELKN G L + D ++NI L ++ T ++ + C
Sbjct: 1 MLFYSFFKSLVGKEVTVELKNDLAITGTLHSVDQYLNIKLNDIFVTEQEKYPHLLSVKNC 60
Query: 60 YIRGNTIKYLRVPDEVID 77
+IRG+ ++Y+R+P E ID
Sbjct: 61 FIRGSVVRYVRLPAEEID 78
>gi|405976315|gb|EKC40827.1| Small nuclear ribonucleoprotein Sm D3 [Crassostrea gigas]
Length = 131
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G LV + MN + + T +DG R ++ Y+
Sbjct: 5 VPIKVLHEAEGHIVTCETTTGEVYRGKLVEAEDNMNCQMSAITVTYRDG-RVAQLENVYL 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|389610295|dbj|BAM18759.1| small ribonucleoprotein particle protein SmD3 [Papilio xuthus]
Length = 130
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + V T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHVVTCETITGEVYRGKLIEAEDNMNCQMTLVTVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|406607031|emb|CCH41546.1| Small nuclear ribonucleoprotein Sm D3 [Wickerhamomyces ciferrii]
Length = 95
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL +GETY + MN+ L ++ TS+DG + + +I
Sbjct: 5 IPVKLLNEAQGHIVSLELNSGETYRA-----EDNMNVQLNDITLTSRDG-KVTHLDHVFI 58
Query: 62 RGNTIKYLRVPD 73
RG+ I++ VPD
Sbjct: 59 RGSNIRFFVVPD 70
>gi|225706764|gb|ACO09228.1| Small nuclear ribonucleoprotein Sm D3 [Osmerus mordax]
gi|225707146|gb|ACO09419.1| Small nuclear ribonucleoprotein Sm D3 [Osmerus mordax]
Length = 127
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|260947028|ref|XP_002617811.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238847683|gb|EEQ37147.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 106
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +EL G+TY G L+ + MN+ L +V T M + ++
Sbjct: 5 VPVRLLNEAQGHIVSLELTTGDTYRGKLIENEDNMNLSLYDVTITKGRTGETSYMNQVFV 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
RG+ I+++ VPD + + K KPP
Sbjct: 65 RGSMIRFVSVPDILRNAPMFFMKPGEKPKPP 95
>gi|340383261|ref|XP_003390136.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Amphimedon
queenslandica]
Length = 131
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+GH + +E GE Y G L+ + MN L+ V T++ G + ++ + ++
Sbjct: 5 IPIKLLHEAEGHIVTLETVMGEIYRGKLLEAEDNMNCQLQNVTVTNRSG-QVSQLEQVFV 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L VPD
Sbjct: 64 RGSMIRFLIVPD 75
>gi|308321147|gb|ADO27727.1| small nuclear ribonucleoprotein sm d3 [Ictalurus furcatus]
Length = 128
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|225716266|gb|ACO13979.1| Small nuclear ribonucleoprotein Sm D3 [Esox lucius]
Length = 127
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|195455442|ref|XP_002074722.1| GK23009 [Drosophila willistoni]
gi|194170807|gb|EDW85708.1| GK23009 [Drosophila willistoni]
Length = 150
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|195384527|ref|XP_002050966.1| GJ19907 [Drosophila virilis]
gi|194145763|gb|EDW62159.1| GJ19907 [Drosophila virilis]
Length = 151
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|195030021|ref|XP_001987867.1| GH19718 [Drosophila grimshawi]
gi|195120652|ref|XP_002004838.1| GI20137 [Drosophila mojavensis]
gi|193903867|gb|EDW02734.1| GH19718 [Drosophila grimshawi]
gi|193909906|gb|EDW08773.1| GI20137 [Drosophila mojavensis]
Length = 151
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|240848533|ref|NP_001155808.1| small nuclear ribonucleoprotein Sm D3 [Acyrthosiphon pisum]
gi|239789870|dbj|BAH71532.1| ACYPI009639 [Acyrthosiphon pisum]
Length = 139
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E +GE Y G L+ + MN + V T +DG R +M Y+
Sbjct: 5 VPIKVLHEAEGHIVTCETIDGEVYRGKLIEAEDNMNCQVSHVTVTYRDG-RVAQMENVYV 63
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 64 RGSKVRFIILPD 75
>gi|209732980|gb|ACI67359.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
Length = 127
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|145340671|ref|XP_001415444.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575667|gb|ABO93736.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 130
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE--- 58
L S KT G P+ VELKN G LV+ D ++NI L T D R+ M
Sbjct: 39 LFYSYFKTLVGKPVTVELKNDLAIAGTLVSVDQYLNIKLENTRVT--DEARYPHMRSVRN 96
Query: 59 CYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+++P+ +D
Sbjct: 97 CFIRGSVVRYVQLPEAAVD 115
>gi|429962659|gb|ELA42203.1| hypothetical protein VICG_00846 [Vittaforma corneae ATCC 50505]
Length = 82
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M PL+L++ ++G + + LK+ + +G LV CD MN+HL+ K G++ + + +C+
Sbjct: 1 MYPLTLIRMSRGKVITMMLKDSQAVSGFLVKCDVAMNMHLQNATIQRKSGEKVF-VKQCF 59
Query: 61 IRGNTIKYLRVPDEVIDK 78
++G +K +++ +++ K
Sbjct: 60 LKGQNVKSVKIDPKILGK 77
>gi|145344044|ref|XP_001416549.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576775|gb|ABO94842.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 95
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL ++GH + VELK GETY G LV + N + +V +DG +M YI
Sbjct: 7 VPVKLLHESEGHVVTVELKTGETYRGQLVESEDNWNCQMTDVTHVGRDGKES-KMEHVYI 65
Query: 62 RGNTIKYLRVPD 73
RG+ ++ + +PD
Sbjct: 66 RGSKVRMMVIPD 77
>gi|260837085|ref|XP_002613536.1| hypothetical protein BRAFLDRAFT_114009 [Branchiostoma floridae]
gi|229298921|gb|EEN69545.1| hypothetical protein BRAFLDRAFT_114009 [Branchiostoma floridae]
Length = 120
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E GE Y G LV + MN + + T +DG R ++ +I
Sbjct: 5 VPIKVLHEAEGHIVTLETTTGEVYRGKLVEAEDNMNCQMANITVTYRDG-RVAQLEHVFI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ +PD
Sbjct: 64 RGSKIRFMILPD 75
>gi|209731578|gb|ACI66658.1| Small nuclear ribonucleoprotein Sm D3 [Salmo salar]
Length = 127
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|41054297|ref|NP_956054.1| small nuclear ribonucleoprotein D3 polypeptide, like [Danio
rerio]
gi|28278495|gb|AAH45929.1| Small nuclear ribonucleoprotein D3 polypeptide, like [Danio
rerio]
gi|182889668|gb|AAI65492.1| Snrpd3l protein [Danio rerio]
Length = 128
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVSQLEQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|301099937|ref|XP_002899059.1| 6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
gi|262104371|gb|EEY62423.1| 6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
Length = 134
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF---WRMP 57
M S KT G + VELKN G L + D ++NI L V + +GD+F M
Sbjct: 39 MFFYSFFKTLVGKEVAVELKNDVALMGVLDSVDQYLNIKLLNV--SVVEGDKFPQLMNMK 96
Query: 58 ECYIRGNTIKYLRVP 72
C+IRG++I+Y+++P
Sbjct: 97 NCFIRGSSIRYVQIP 111
>gi|24652901|ref|NP_725106.1| small ribonucleoprotein particle protein SmD3 [Drosophila
melanogaster]
gi|194883784|ref|XP_001975977.1| GG20251 [Drosophila erecta]
gi|195333626|ref|XP_002033491.1| GM21338 [Drosophila sechellia]
gi|195485512|ref|XP_002091120.1| GE12410 [Drosophila yakuba]
gi|195551839|ref|XP_002076307.1| GD15400 [Drosophila simulans]
gi|13124554|sp|O44437.1|SMD3_DROME RecName: Full=Small nuclear ribonucleoprotein Sm D3; Short=Sm-D3;
AltName: Full=snRNP core protein D3
gi|2708715|gb|AAB92621.1| small nuclear ribonucleoprotein Sm D3 [Drosophila melanogaster]
gi|7303511|gb|AAF58566.1| small ribonucleoprotein particle protein SmD3 [Drosophila
melanogaster]
gi|21064481|gb|AAM29470.1| RE39820p [Drosophila melanogaster]
gi|190659164|gb|EDV56377.1| GG20251 [Drosophila erecta]
gi|194125461|gb|EDW47504.1| GM21338 [Drosophila sechellia]
gi|194177221|gb|EDW90832.1| GE12410 [Drosophila yakuba]
gi|194201956|gb|EDX15532.1| GD15400 [Drosophila simulans]
gi|220948494|gb|ACL86790.1| SmD3-PA [synthetic construct]
gi|220957770|gb|ACL91428.1| SmD3-PA [synthetic construct]
Length = 151
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTANLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|321456914|gb|EFX68011.1| hypothetical protein DAPPUDRAFT_63450 [Daphnia pulex]
Length = 118
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G LV + MN + + T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHIITCETNTGEIYRGKLVEAEDNMNCQMTNITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|50759758|ref|XP_417768.1| PREDICTED: LSM10, U7 small nuclear RNA associated [Gallus gallus]
Length = 123
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
LL+ GH V+L++ T G + N D +MN+ L EV T + G+ ++ E ++ G
Sbjct: 20 LLQGLHGHVTTVDLRDESTATGRVANVDAFMNMRLAEVTFTDRRGE-VSQLDEIFVTGRN 78
Query: 66 IKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
++Y+ +PDEV + ++ +R+ + R R G
Sbjct: 79 VRYVHIPDEV------DIRATIERQLQAIHRVRYFG 108
>gi|58393584|ref|XP_320178.2| AGAP012380-PA [Anopheles gambiae str. PEST]
gi|55234277|gb|EAA00211.2| AGAP012380-PA [Anopheles gambiae str. PEST]
Length = 143
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHVVTCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RVGNLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|427786245|gb|JAA58574.1| Putative small nuclear ribonucleoprotein sm d3 [Rhipicephalus
pulchellus]
Length = 122
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G LV + MN + + T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLVEAEDNMNCQMCNITVTYRDG-RVAQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ +PD
Sbjct: 64 RGSKIRFMILPD 75
>gi|195148972|ref|XP_002015436.1| GL11081 [Drosophila persimilis]
gi|198455755|ref|XP_002138132.1| GA24604 [Drosophila pseudoobscura pseudoobscura]
gi|194109283|gb|EDW31326.1| GL11081 [Drosophila persimilis]
gi|198135383|gb|EDY68690.1| GA24604 [Drosophila pseudoobscura pseudoobscura]
Length = 150
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTGNLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|198436795|ref|XP_002126080.1| PREDICTED: similar to Small nuclear ribonucleoprotein Sm D3
(Sm-D3) (snRNP core protein D3) [Ciona intestinalis]
Length = 130
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN +++V T +DG R ++ YI
Sbjct: 5 VPIKVLHEAEGHVVTCESATGEVYRGKLIEAEDNMNSQMQDVTVTYRDG-RTAQLQNIYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 64 RGSQVRFMILPD 75
>gi|448082089|ref|XP_004195048.1| Piso0_005589 [Millerozyma farinosa CBS 7064]
gi|448086614|ref|XP_004196142.1| Piso0_005589 [Millerozyma farinosa CBS 7064]
gi|359376470|emb|CCE87052.1| Piso0_005589 [Millerozyma farinosa CBS 7064]
gi|359377564|emb|CCE85947.1| Piso0_005589 [Millerozyma farinosa CBS 7064]
Length = 106
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTS-KDGDRFWRMPECY 60
+P+ LL AQGH + VEL G+ Y G L+ + MN+ L +V T K G + M + +
Sbjct: 5 IPVKLLNEAQGHIISVELTTGDIYRGKLLENEDNMNLSLYDVTITKGKSGSTSY-MEQVF 63
Query: 61 IRGNTIKYLRVPD 73
+RG+ I+Y+ VP+
Sbjct: 64 VRGSMIRYVMVPE 76
>gi|401887212|gb|EJT51213.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS
2479]
Length = 200
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL + GH + VELK GE Y G L+ + +N+ L+++ T++DG R ++ + YI
Sbjct: 6 VPVKLLHESLGHIVTVELKTGEMYRGKLMEAEDSLNMALKDITVTARDG-RVSQLEQVYI 64
Query: 62 RGNTIKYLRVPDEVIDKVQEETKSR 86
RG+ L + ID ++ + R
Sbjct: 65 RGSMEWALCIEIWAIDTLRWARRVR 89
>gi|194753313|ref|XP_001958958.1| GF12297 [Drosophila ananassae]
gi|190620256|gb|EDV35780.1| GF12297 [Drosophila ananassae]
Length = 151
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RTASLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|170038404|ref|XP_001847040.1| small nuclear ribonucleoprotein SM D3 [Culex quinquefasciatus]
gi|167882083|gb|EDS45466.1| small nuclear ribonucleoprotein SM D3 [Culex quinquefasciatus]
Length = 155
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMTQLTVTFRDG-RTANLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|412993679|emb|CCO14190.1| small nuclear ribonucleoprotein LSM2 [Bathycoccus prasinos]
Length = 94
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP--- 57
ML S KT G + VELKN G LV+ D ++NI L V + D +++ M
Sbjct: 1 MLFYSFFKTLVGKQITVELKNDLEIRGTLVSVDQYLNIKLESV--SVLDEEKYPHMKSVR 58
Query: 58 ECYIRGNTIKYLRVPDEVID 77
+C++RG+ ++Y++ P+E +D
Sbjct: 59 DCFVRGSVVRYVQPPEESVD 78
>gi|328771463|gb|EGF81503.1| hypothetical protein BATDEDRAFT_10632 [Batrachochytrium
dendrobatidis JAM81]
Length = 111
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---PE 58
L S KT G +++ELKN G LV+ D ++N L + +D +RF M
Sbjct: 15 LFYSFFKTLVGQEVIIELKNDLAIVGKLVSVDQFLNFKLDNI--RVEDEERFPHMMSVKN 72
Query: 59 CYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+R+P +D
Sbjct: 73 CFIRGSVVRYVRIPASKVD 91
>gi|77022848|ref|XP_888868.1| hypothetical protein CaJ7_s010 [Candida albicans SC5314]
gi|76573681|dbj|BAE44765.1| hypothetical protein [Candida albicans]
Length = 95
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 36 MNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET 83
MN+ L VI T G++F ++PE YIRG IKYLR+PD+++ +E++
Sbjct: 1 MNLTLHNVIQTDSRGEKFMKIPEIYIRGIHIKYLRIPDDIMGYAKEQS 48
>gi|348672729|gb|EGZ12549.1| hypothetical protein PHYSODRAFT_317573 [Phytophthora sojae]
Length = 99
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF---WRMP 57
+L S KT G + VELKN G L + D ++NI L V + +GD+F M
Sbjct: 4 LLFYSFFKTLVGKEVAVELKNDVALMGVLDSVDQYLNIKLLNV--SVVEGDKFPQLMNMK 61
Query: 58 ECYIRGNTIKYLRVP 72
C+IRG++I+Y+++P
Sbjct: 62 NCFIRGSSIRYVQIP 76
>gi|238883402|gb|EEQ47040.1| hypothetical protein CAWG_05595 [Candida albicans WO-1]
Length = 97
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 36 MNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET 83
MN+ L VI T G++F ++PE YIRG IKYLR+PD+++ +E++
Sbjct: 1 MNLTLHNVIQTDSRGEKFMKIPEIYIRGIHIKYLRIPDDIMGYAKEQS 48
>gi|50555508|ref|XP_505162.1| YALI0F08459p [Yarrowia lipolytica]
gi|49651032|emb|CAG77969.1| YALI0F08459p [Yarrowia lipolytica CLIB122]
Length = 99
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP--- 57
ML SL KT H + VELKN G L + D +MNI L V T+ + D+F +
Sbjct: 1 MLFFSLFKTLVNHEITVELKNDLQIRGILKSVDQFMNIKLENV--TTVEEDKFPHLTAVR 58
Query: 58 ECYIRGNTIKYLRVPDEVIDKVQEETKSR 86
+ +IRG+ ++Y+ +P +D E +R
Sbjct: 59 DLFIRGSVVRYVHLPPGAVDTTLLEDATR 87
>gi|209881474|ref|XP_002142175.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209557781|gb|EEA07826.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 126
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L GH + +E+K+G+ Y G L + + MN L V T KDG R + +CY+
Sbjct: 5 IPVKILYEGLGHIISIEMKSGDLYRGTLAHVEDNMNCMLDTVNVTMKDG-RPLALEQCYL 63
Query: 62 RGNTIKYLRVPDEV----IDKVQEETKSRS 87
RG+ I++ +PD + + K+ K+R+
Sbjct: 64 RGSQIRFFILPDMLKNAPMFKLAANAKNRA 93
>gi|301093933|ref|XP_002997811.1| U6 snRNA-associated Sm-like protein LSm2, putative [Phytophthora
infestans T30-4]
gi|262109897|gb|EEY67949.1| U6 snRNA-associated Sm-like protein LSm2, putative [Phytophthora
infestans T30-4]
Length = 95
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF---WRMPE 58
L S KT G + VELKN G L + D ++NI L V + +GD+F M
Sbjct: 1 LFYSFFKTLVGKEVAVELKNDVALMGVLDSVDQYLNIKLLNV--SVVEGDKFPQLMNMKN 58
Query: 59 CYIRGNTIKYLRVP 72
C+IRG++I+Y+++P
Sbjct: 59 CFIRGSSIRYVQIP 72
>gi|294653209|gb|ADF28512.1| small nuclear robonucleoprotein SMD3 [Pelinobius muticus]
Length = 122
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ + A+GH + +E GE Y G LV + MN + +V T +DG R ++ YI
Sbjct: 5 VPVKVFHEAEGHVVTLETNTGEIYRGRLVEAEDNMNCQMADVTVTYRDG-RVGQLENIYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|392921511|ref|NP_001256511.1| Protein GUT-2, isoform a [Caenorhabditis elegans]
gi|58081790|emb|CAB03328.3| Protein GUT-2, isoform a [Caenorhabditis elegans]
Length = 97
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE-- 58
ML S K+ G ++VELKN + G L + D ++N+ L ++ T D +RF M
Sbjct: 1 MLFFSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDI--TVSDPERFPHMVSVK 58
Query: 59 -CYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+++P + +D
Sbjct: 59 NCFIRGSVVRYVQLPSDQVD 78
>gi|452822235|gb|EME29256.1| small nuclear ribonucleoprotein D3 [Galdieria sulphuraria]
Length = 125
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A + VE K+G+ Y G L + + MN L++V CT +DG + ++
Sbjct: 5 IPIKLLHEAISQTVTVETKSGDLYRGTLYDAEDNMNCQLKKVTCTGRDG-KITPFEHVFL 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++ VPD
Sbjct: 64 RGSKIRFFIVPD 75
>gi|308504419|ref|XP_003114393.1| CRE-GUT-2 protein [Caenorhabditis remanei]
gi|308261778|gb|EFP05731.1| CRE-GUT-2 protein [Caenorhabditis remanei]
Length = 97
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE-- 58
ML S K+ G +++ELKN + G L + D ++N+ L ++ T D +RF M
Sbjct: 1 MLFFSFFKSLVGKDVVIELKNDLSICGTLHSVDQYLNMKLTDI--TVSDPERFPHMVSVK 58
Query: 59 -CYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+++P + +D
Sbjct: 59 NCFIRGSVVRYVQLPSDQVD 78
>gi|428184458|gb|EKX53313.1| hypothetical protein GUITHDRAFT_84386 [Guillardia theta CCMP2712]
Length = 130
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+ H + VELK+GE Y G L + MN ++ V T +DG + + +I
Sbjct: 5 VPVKLLHEAESHIITVELKSGELYRGTLQEAEDNMNCNMTNVTMTGRDGS-ISTLEQVFI 63
Query: 62 RGNTIKYLRVPD 73
RG I+++ +PD
Sbjct: 64 RGGLIRFVILPD 75
>gi|384497172|gb|EIE87663.1| hypothetical protein RO3G_12374 [Rhizopus delemar RA 99-880]
Length = 119
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 11/74 (14%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + +ELK G+ Y G L L ++ T++DG R ++ + YI
Sbjct: 5 VPIKLLHEAQGHIISLELKTGQLYRGKL----------LEDITVTARDG-RVSQLDQVYI 53
Query: 62 RGNTIKYLRVPDEV 75
RG+ +++ VPD +
Sbjct: 54 RGSHVRFFIVPDML 67
>gi|6730225|pdb|1D3B|A Chain A, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730227|pdb|1D3B|C Chain C, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730229|pdb|1D3B|E Chain E, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730231|pdb|1D3B|G Chain G, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730233|pdb|1D3B|I Chain I, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
gi|6730235|pdb|1D3B|K Chain K, Crystal Structure Of The D3b Subcomplex Of The Human
Core Snrnp Domain At 2.0a Resolution
Length = 75
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG I++L +PD
Sbjct: 64 RGCKIRFLILPD 75
>gi|168003064|ref|XP_001754233.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694787|gb|EDQ81134.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 98
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNC-DTWMNIHLREVICTSKDGDRFWRMPECY 60
+ + LL A+GH + VELK+GE Y G L+ C D W N L V T+ DG + ++
Sbjct: 7 ILVKLLHEAEGHIVTVELKSGEAYRGSLIECEDNW-NSQLESVTYTAMDG-KVSQLEHVS 64
Query: 61 IRGNTIKYLRVPD 73
IRG+ ++++ +PD
Sbjct: 65 IRGSKVRFMIIPD 77
>gi|156365662|ref|XP_001626763.1| predicted protein [Nematostella vectensis]
gi|156213651|gb|EDO34663.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + +G L + D ++N+ L ++ T D D++ M
Sbjct: 1 MLFYSFFKSLVGKEVIVELKNDLSVHGTLDSVDQFLNLKLTDIDVT--DPDKYPHMLSVK 58
Query: 58 ECYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+++P E +D
Sbjct: 59 NCFIRGSVVRYVQLPSEEVD 78
>gi|167523208|ref|XP_001745941.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775742|gb|EDQ89365.1| predicted protein [Monosiga brevicollis MX1]
Length = 96
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S KT G + VELKN NG L + D ++NI L + D +R+ M
Sbjct: 1 MLFSSFFKTLIGKEVTVELKNDLQLNGVLKSVDQFLNIKLDSI--QVADIERYPHMMAVK 58
Query: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKSRS 87
C+IRG+ ++Y+ +P E +DK +Q+ T+ +
Sbjct: 59 NCFIRGSVVRYIHLPPEHVDKQLLQDATRKEA 90
>gi|50344816|ref|NP_001002081.1| small nuclear ribonucleoprotein Sm D3 [Danio rerio]
gi|47938090|gb|AAH71554.1| Small nuclear ribonucleoprotein D3 polypeptide [Danio rerio]
Length = 127
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + +N + + T +DG R ++ + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNVNCQMANITVTYRDG-RVAQLEQVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|121543877|gb|ABM55603.1| LSM2-like protein [Maconellicoccus hirsutus]
Length = 96
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDR---FWRMP 57
ML S K+ G +++ELKN + G L + D ++N+ L+EV T D ++ +
Sbjct: 1 MLFYSFFKSLVGKEVIIELKNDLSMCGTLSSVDQYLNLKLKEV--TVNDTEKHPHMLSVS 58
Query: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKSRSDR 89
C+IRG+ ++Y+++P + +D +Q+ T++ +++
Sbjct: 59 NCFIRGSVVRYVQLPADEVDTQLLQDATRNEAEK 92
>gi|226372678|gb|ACO51964.1| U7 snRNA-associated Sm-like protein LSm10 [Rana catesbeiana]
Length = 121
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
LL+ GH VEL++ + G ++N D +MN+ L +V T + G ++ + +I G
Sbjct: 20 LLQGLHGHATTVELRDESSAKGSVINVDAFMNVRLEKVTYTDRRGKE-SKLDDLFINGRN 78
Query: 66 IKYLRVPDEV--IDKVQEETKSRSDRKPPGVGRGRGRGREDGASGR 109
++Y+ +P+EV I ++E K K G+ G+GR++ S +
Sbjct: 79 VRYIHIPEEVDIIHTIEERLK-----KIQGIRGFGGKGRKEFVSKK 119
>gi|313228903|emb|CBY18055.1| unnamed protein product [Oikopleura dioica]
Length = 124
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+ H + E GE + G LV + MNI +++V T ++G ++ YI
Sbjct: 5 IPIKVLHEAESHVITCETSTGEVFRGKLVEAEEHMNIQMQDVTATYRNGST-AQLANIYI 63
Query: 62 RGNTIKYLRVPD 73
RG IK++ +P+
Sbjct: 64 RGTQIKFMILPE 75
>gi|71028700|ref|XP_763993.1| small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68350947|gb|EAN31710.1| small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 118
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
P+ LL GH + VEL+N Y G L N + MN L V+ T KDG R + + Y+R
Sbjct: 6 PIKLLYEGIGHVVTVELQNSNLYRGTLTNVEDNMNCLLEGVVMTMKDG-RTIALEQVYLR 64
Query: 63 GNTIKYLRVPD 73
G I+++ PD
Sbjct: 65 GAQIQFMIFPD 75
>gi|118387719|ref|XP_001026962.1| Sm protein [Tetrahymena thermophila]
gi|89308732|gb|EAS06720.1| Sm protein [Tetrahymena thermophila SB210]
Length = 2269
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LP+ +L+ ++ H + +ELK G+ + G+L + MN+ L V +++G + ++ Y+
Sbjct: 5 LPVKILRESESHVVTIELKTGDQFRGYLAESEDTMNVRLDNVTMINRNGKQS-QLQSVYL 63
Query: 62 RGNTIKYLRVPD-----EVIDKVQEETKSRS 87
RG I+++ +PD + +++ ++K+++
Sbjct: 64 RGAQIRFIVIPDFFKNAPMFKRIKAQSKNKN 94
>gi|221127676|ref|XP_002162398.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Hydra
magnipapillata]
Length = 103
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + +G L + D ++NI L ++ T D +R+ M
Sbjct: 1 MLFYSFFKSLVGKEVIVELKNDLSISGVLDSVDQFLNIKLTDISVT--DTERYPHMMSVK 58
Query: 58 ECYIRGNTIKYLRVPDEVID 77
C++RG+ ++Y+++P E ID
Sbjct: 59 NCFLRGSVVRYVQLPPEDID 78
>gi|344229960|gb|EGV61845.1| hypothetical protein CANTEDRAFT_107251 [Candida tenuis ATCC
10573]
Length = 108
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL AQGH + VEL G+TY G L+ + MN+ L +V+ T M + ++
Sbjct: 6 IPVRLLTEAQGHIVTVELVTGDTYRGKLLENEDNMNLSLYDVVITKGRSGTTSHMSQVFV 65
Query: 62 RGNTIKYLRVPD 73
RG+ I+ + VP+
Sbjct: 66 RGSMIRLVIVPE 77
>gi|440294352|gb|ELP87369.1| hypothetical protein EIN_096260 [Entamoeba invadens IP1]
Length = 95
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
ML S KT G + VELKN G L+ D +N+ + + + +F + C+
Sbjct: 1 MLFYSFFKTLIGKEVTVELKNDAIITGKLLAVDQLLNVKMDTLKSDNALFPQFQTLTNCF 60
Query: 61 IRGNTIKYLRVPDEVID 77
IRGNTI+Y+ + + +ID
Sbjct: 61 IRGNTIRYISMSESLID 77
>gi|84996607|ref|XP_953025.1| snRNP protein [Theileria annulata strain Ankara]
gi|65304021|emb|CAI76400.1| snRNP protein, putative [Theileria annulata]
Length = 118
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
P+ LL GH + VEL+N Y G L N + MN + V+ T KDG R + + Y+R
Sbjct: 6 PIKLLYEGIGHVVTVELQNSNLYRGTLTNVEDNMNCLMEGVVMTMKDG-RTLALEQVYLR 64
Query: 63 GNTIKYLRVPDEV 75
G I+++ PD +
Sbjct: 65 GAQIQFMIFPDML 77
>gi|331243742|ref|XP_003334513.1| U6 snRNA-associated Sm-like protein LSm2 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|309313503|gb|EFP90094.1| U6 snRNA-associated Sm-like protein LSm2 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 96
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREV-ICTSKDGDRFWRMPEC 59
ML S+ KT G + +ELKN G L + D ++N+ L + + + + C
Sbjct: 1 MLIFSVFKTLTGQEVTIELKNDLAIQGTLASVDQFLNLKLENIKVLDQERHPHMMAVKNC 60
Query: 60 YIRGNTIKYLRVPDEVIDKVQEETKSRSD 88
+IRG+ ++Y+++P +D E +R +
Sbjct: 61 FIRGSVVRYVQIPKAAVDTQLLEDATRKE 89
>gi|449016184|dbj|BAM79586.1| similar to U6 snRNA-associated Sm-like protein [Cyanidioschyzon
merolae strain 10D]
gi|449020060|dbj|BAM83462.1| similar to U6 snRNA-associated Sm-like protein [Cyanidioschyzon
merolae strain 10D]
Length = 97
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREV-------ICTSKDGDRF 53
MLP+ L++ A G + VELKNG+ G L D WMN++L T+ ++
Sbjct: 1 MLPVGLVRGAVGQQVTVELKNGKHCTGVLTGVDPWMNLNLESARVTGASRAATTDSVEQA 60
Query: 54 WRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRK 90
+IRG IK +++P + + Q+E K R R+
Sbjct: 61 ASYAALHIRGTMIKLVQLPSKSWEYAQDERKPRQLRE 97
>gi|242013355|ref|XP_002427375.1| Small nuclear ribonucleoprotein SM D3, putative [Pediculus
humanus corporis]
gi|212511744|gb|EEB14637.1| Small nuclear ribonucleoprotein SM D3, putative [Pediculus
humanus corporis]
Length = 136
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + T +DG + ++ YI
Sbjct: 5 VPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMVTCSVTYRDG-KVSQLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I++L +PD
Sbjct: 64 RGSKIRFLILPD 75
>gi|260943870|ref|XP_002616233.1| hypothetical protein CLUG_03474 [Clavispora lusitaniae ATCC 42720]
gi|238849882|gb|EEQ39346.1| hypothetical protein CLUG_03474 [Clavispora lusitaniae ATCC 42720]
Length = 115
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 4 LSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRG 63
L L +A P+ VELKNG + NG +++C MN+ ++ + D M IRG
Sbjct: 7 LMTLPSATNQPVTVELKNGNSVNGQILSCSPSMNLSMKNIKLIQPHQDP-QLMQFMNIRG 65
Query: 64 NTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGR 100
N I+ + +PD D E SRS K G G G G+
Sbjct: 66 NQIRQILLPD---DLNIESLLSRSTVKMKGSGAGPGK 99
>gi|448087362|ref|XP_004196309.1| Piso0_005764 [Millerozyma farinosa CBS 7064]
gi|359377731|emb|CCE86114.1| Piso0_005764 [Millerozyma farinosa CBS 7064]
Length = 129
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 33/141 (23%)
Query: 12 GHPMLVELKNGETYNGHLVNCDTWMNIHLREV--ICTSKDGDRFWRMPECYIRGNTIKYL 69
P+ +ELKNG + NG +++C MNI ++ V I +D M IRGN I+ +
Sbjct: 15 SQPVTLELKNGSSINGQILSCSPSMNISMKNVKLIRPHQDPQLLQYM---NIRGNQIRLV 71
Query: 70 RVPDEV-IDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIGRGLDDGGAKGAGG 128
+PD++ ID V ++ G+G G G ++ T GI G+KGA
Sbjct: 72 ILPDDLNIDSVLAKSAVTIK------GQGAGPGSQN------TNGI-------GSKGA-L 111
Query: 129 GRGRGGPGGKPGGSRGGGRSR 149
GR +G P RGG R+R
Sbjct: 112 GRNKGAP-------RGGARAR 125
>gi|294654851|ref|XP_456936.2| DEHA2A13948p [Debaryomyces hansenii CBS767]
gi|199429198|emb|CAG84914.2| DEHA2A13948p [Debaryomyces hansenii CBS767]
Length = 131
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 7 LKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTI 66
L A P+ VELKNG + NG +++C MN+ ++ + + D + IRGN I
Sbjct: 10 LPNATNQPITVELKNGNSINGQILSCSPSMNLSMKNIKLSQPHQDP-QLLQFINIRGNQI 68
Query: 67 KYLRVPDEV-IDKVQEETKSRSDRKPPGVGRGRGRGREDGASG 108
+ + +PDE+ +D V + + G G G G +D AS
Sbjct: 69 RQILLPDELNVDNVLARSVVKIK------GNGSGPGSKDLASS 105
>gi|157129367|ref|XP_001661657.1| small nuclear ribonucleoprotein sm d3 [Aedes aegypti]
gi|108872253|gb|EAT36478.1| AAEL011433-PA [Aedes aegypti]
Length = 147
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + E GE Y G L+ + MN + ++ T +DG R + YI
Sbjct: 5 VPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMTQLTVTYRDG-RTSNLENVYI 63
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ +PD
Sbjct: 64 RGSKIRFMILPD 75
>gi|346470701|gb|AEO35195.1| hypothetical protein [Amblyomma maculatum]
gi|427786045|gb|JAA58474.1| Putative u6 snrna-associated sm-like protein lsm2 [Rhipicephalus
pulchellus]
Length = 95
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD-RFWRMPEC 59
ML S K+ G ++VELKN + G L + D ++NI L ++ T +D + C
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSMCGTLHSVDQYLNIKLTDISVTEQDKYPHMLSVKNC 60
Query: 60 YIRGNTIKYLRVP-DEVIDKVQEET--KSRSDRKP 91
+IRG+ ++Y+++P DEV ++ ++ K S KP
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEASQSKP 95
>gi|442762477|gb|JAA73397.1| Putative small nuclear ribonucleoprotein sm d3, partial [Ixodes
ricinus]
Length = 119
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 4 LSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRG 63
+ +L A+GH + E GE Y G LV + MN + + T +DG R ++ YIRG
Sbjct: 4 IKVLHEAEGHIVTCETNTGEVYRGKLVEAEDNMNCQMANITVTYRDG-RVAQLENVYIRG 62
Query: 64 NTIKYLRVPD 73
+ I++L +PD
Sbjct: 63 SKIRFLILPD 72
>gi|50422631|ref|XP_459888.1| DEHA2E13420p [Debaryomyces hansenii CBS767]
gi|49655556|emb|CAG88129.1| DEHA2E13420p [Debaryomyces hansenii CBS767]
Length = 106
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTS-KDGDRFWRMPECY 60
+P+ LL AQGH + +EL G+TY G L+ + MN+ L +V T + G+ + M + +
Sbjct: 5 IPVKLLNEAQGHIISLELTTGDTYRGKLLENEDNMNLSLYDVTITKGRTGNTSY-MNQVF 63
Query: 61 IRGNTIKYLRVPD 73
+RG+ I+++ VP+
Sbjct: 64 VRGSMIRFVMVPE 76
>gi|118490850|ref|XP_001238734.1| small nuclear ribonucleoprotein (snrnp),putative [Eimeria tenella
strain Houghton]
gi|109238517|emb|CAK51481.1| small nuclear ribonucleoprotein (snrnp),putative [Eimeria
tenella]
Length = 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL GH + VE K G Y G L N + MN+ ++ V T KDG + + + YI
Sbjct: 9 IPVKLLHEGLGHTITVETKTGSLYRGTLENAEDNMNMLIQGVTVTHKDG-KVLSLEQVYI 67
Query: 62 RGNTIKYLRVPD 73
RG+ ++ + PD
Sbjct: 68 RGSQVQMVIFPD 79
>gi|340374852|ref|XP_003385951.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm2-like
[Amphimedon queenslandica]
Length = 112
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 2 LPL--SLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM--- 56
+PL S K+ G ++VELKN + +G L + D ++NI L ++ + D D++ M
Sbjct: 1 MPLFYSFFKSLVGKEVIVELKNDLSIHGTLHSVDQYLNIKLTDI--SIPDPDKYPHMLSV 58
Query: 57 PECYIRGNTIKYLRVPDEVID 77
C+IRG+ I+Y+++P E +D
Sbjct: 59 KNCFIRGSVIRYVQLPAEEVD 79
>gi|242007296|ref|XP_002424477.1| Surfeit locus protein, putative [Pediculus humanus corporis]
gi|212507895|gb|EEB11739.1| Surfeit locus protein, putative [Pediculus humanus corporis]
Length = 401
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + G L + D ++NI L E+ T D D++ M
Sbjct: 307 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTEISVT--DPDKYPHMLSIK 364
Query: 58 ECYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+++P + +D
Sbjct: 365 NCFIRGSVVRYVQLPADEVD 384
>gi|224008695|ref|XP_002293306.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970706|gb|EED89042.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 182
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 18 ELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD 73
++KNGE Y G L+N + MN+ L EV+ T+++G + ++P Y+RG+ ++++ +PD
Sbjct: 89 QMKNGEIYRGLLLNAEDTMNMTLSEVVRTARNG-QVSKLPTVYLRGSGVRFIALPD 143
>gi|348519431|ref|XP_003447234.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like isoform 1
[Oreochromis niloticus]
gi|348519433|ref|XP_003447235.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like isoform 2
[Oreochromis niloticus]
Length = 140
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
LL+ QG V+L+N T G +VN D +MNI L +V+ + G + ++ + +I G
Sbjct: 38 LLQGLQGEVTTVDLRNESTARGRVVNVDAFMNIRLEDVLYRDRRG-QLTQLQDLFITGRN 96
Query: 66 IKYLRVPDEV 75
I+Y+ +PD +
Sbjct: 97 IRYVHIPDHM 106
>gi|401825715|ref|XP_003886952.1| small nuclear ribonucleoprotein [Encephalitozoon hellem ATCC
50504]
gi|392998109|gb|AFM97971.1| small nuclear ribonucleoprotein [Encephalitozoon hellem ATCC
50504]
Length = 87
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP--EC 59
+PL LL AQG + VE NG+ Y G + D +MN+ L EV TS MP E
Sbjct: 5 VPLKLLHEAQGFVVTVETNNGDMYRGRMKEVDDYMNVVLDEVTVTSHSS----CMPKKEI 60
Query: 60 YIRGNTIKYLRVP 72
IRG++I++ +P
Sbjct: 61 VIRGSSIRFFVLP 73
>gi|354545656|emb|CCE42383.1| hypothetical protein CPAR2_200260 [Candida parapsilosis]
Length = 118
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 10 AQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYL 69
+ P+ VELKNG NG L++C MN++L+ V K D + +RGN I+ +
Sbjct: 13 STNQPVTVELKNGNIINGTLLSCTPSMNLNLKNVKLQQKYQDPIL-LQYINVRGNQIRQI 71
Query: 70 RVPDEV-IDKVQEETKSR 86
+P+++ ID V E++++R
Sbjct: 72 LLPEDLNIDSVLEKSQTR 89
>gi|125978707|ref|XP_001353386.1| GA10305 [Drosophila pseudoobscura pseudoobscura]
gi|195160603|ref|XP_002021164.1| GL25187 [Drosophila persimilis]
gi|54642144|gb|EAL30893.1| GA10305 [Drosophila pseudoobscura pseudoobscura]
gi|194118277|gb|EDW40320.1| GL25187 [Drosophila persimilis]
Length = 95
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 58
Query: 58 ECYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+++P E +D
Sbjct: 59 NCFIRGSVVRYVQLPGEEVD 78
>gi|321473278|gb|EFX84246.1| hypothetical protein DAPPUDRAFT_209723 [Daphnia pulex]
Length = 95
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISIT--DPDKYPHMLSVK 58
Query: 58 ECYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+++P E +D
Sbjct: 59 NCFIRGSVVRYVQLPPEEVD 78
>gi|345488169|ref|XP_001605095.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Nasonia
vitripennis]
Length = 95
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 58
Query: 58 ECYIRGNTIKYLRVP-DEV 75
C+IRG+ ++Y+++P DEV
Sbjct: 59 NCFIRGSVVRYVQLPGDEV 77
>gi|325182501|emb|CCA16956.1| 6 snRNAassociated Smlike protein putative [Albugo laibachii Nc14]
Length = 94
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREV-ICTSKDGDRFWRMPEC 59
ML S KT G + VELKN G L + D ++N+ L V + S + M C
Sbjct: 1 MLFYSFFKTLVGKEVAVELKNDVALMGTLHSVDQYLNMKLMGVSVVESDKYPQLMNMKNC 60
Query: 60 YIRGNTIKYLRVPDEVID 77
+IRG+ I+Y+++P + +D
Sbjct: 61 FIRGSVIRYVQIPAQEVD 78
>gi|430811877|emb|CCJ30671.1| unnamed protein product [Pneumocystis jirovecii]
Length = 114
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF 53
+PL LL A GH + EL NG TY G L+ + MNI L+++ T++DG F
Sbjct: 6 IPLKLLHEATGHIVTCELSNGSTYRGKLLEAEDNMNIQLKDITVTARDGRVF 57
>gi|21358381|ref|NP_648570.1| CG10418 [Drosophila melanogaster]
gi|195327103|ref|XP_002030261.1| GM25341 [Drosophila sechellia]
gi|195376259|ref|XP_002046914.1| GJ13149 [Drosophila virilis]
gi|195493810|ref|XP_002094573.1| GE21899 [Drosophila yakuba]
gi|195589798|ref|XP_002084636.1| GD14374 [Drosophila simulans]
gi|7294589|gb|AAF49929.1| CG10418 [Drosophila melanogaster]
gi|194119204|gb|EDW41247.1| GM25341 [Drosophila sechellia]
gi|194154072|gb|EDW69256.1| GJ13149 [Drosophila virilis]
gi|194180674|gb|EDW94285.1| GE21899 [Drosophila yakuba]
gi|194196645|gb|EDX10221.1| GD14374 [Drosophila simulans]
gi|220951570|gb|ACL88328.1| CG10418-PA [synthetic construct]
Length = 95
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 58
Query: 58 ECYIRGNTIKYLRVP-DEV 75
C+IRG+ ++Y+++P DEV
Sbjct: 59 NCFIRGSVVRYVQLPGDEV 77
>gi|312077154|ref|XP_003141178.1| small nuclear ribonucleoprotein sm d1 [Loa loa]
gi|307763657|gb|EFO22891.1| small nuclear ribonucleoprotein sm d1 [Loa loa]
Length = 123
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG G +V D MN HLR V T K+ + + IRGN
Sbjct: 7 LMKLAH-ESVTIELKNGTLVTGTIVGVDVAMNTHLRTVKMTLKNREPV-SLDSLSIRGNN 64
Query: 66 IKYLRVPDEV-IDKVQEETKSRSDRKPPGVGRGRG 99
I+Y+ +PD + +D + + + R +KP GRGR
Sbjct: 65 IRYIILPDTIPLDTLLVDDEPR--KKPARGGRGRA 97
>gi|270001426|gb|EEZ97873.1| hypothetical protein TcasGA2_TC000255 [Tribolium castaneum]
Length = 95
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + G L + D ++NI L ++ T D +++ M
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVT--DTEKYPHMLSVK 58
Query: 58 ECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92
C+IRG+ ++Y+++P + +D + +R + P
Sbjct: 59 NCFIRGSVVRYVQLPADEVDTQLLQDSARKEATAP 93
>gi|170585533|ref|XP_001897537.1| small nuclear ribonucleoprotein Sm D3 [Brugia malayi]
gi|158595042|gb|EDP33618.1| small nuclear ribonucleoprotein Sm D3, putative [Brugia malayi]
Length = 91
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E GE Y G L + MN + EV T +DG R + +I
Sbjct: 6 VPIKILHEAEGHVITLETTIGEVYRGKLNEAEDNMNCQMSEVTVTYRDG-RTHHLDNVFI 64
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ +PD
Sbjct: 65 RGSKIRFMILPD 76
>gi|393907050|gb|EFO18420.2| U6 snRNA-associated Sm-like protein LSm2 [Loa loa]
Length = 99
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + G L + D ++N+ L ++ T D +R+ M
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDISVT--DSERYPHMLSVK 58
Query: 58 ECYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+++P + +D
Sbjct: 59 NCFIRGSVVRYVQLPADQVD 78
>gi|269986972|gb|EEZ93248.1| Like-Sm ribonucleoprotein core [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 78
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
PL LL +A+G +LVELKNG G LV D +N+ L KD D ++ +IR
Sbjct: 9 PLDLLNSAKGKMVLVELKNGHAITGKLVAFDVHINVTLENA-EEKKDADTLRKLGNVFIR 67
Query: 63 GNTIKYL 69
G+TI +
Sbjct: 68 GDTIILI 74
>gi|328770984|gb|EGF81025.1| hypothetical protein BATDEDRAFT_11263 [Batrachochytrium
dendrobatidis JAM81]
Length = 124
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG T NG + D MN HL+ V T K+ D + IRGNTI+Y +PD +
Sbjct: 20 IELKNGTTINGTITGVDMQMNTHLKTVKMTVKNKDPV-HLETLSIRGNTIRYFILPDAL 77
>gi|8778615|gb|AAF79623.1|AC027665_24 F5M15.9 [Arabidopsis thaliana]
Length = 207
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +I
Sbjct: 7 IPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDG-KVSQLEHVFI 65
Query: 62 RGNTIK 67
RG+ ++
Sbjct: 66 RGSKVR 71
>gi|115725270|ref|XP_001200318.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Strongylocentrotus purpuratus]
gi|115896565|ref|XP_001200071.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Strongylocentrotus purpuratus]
Length = 124
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 4 LSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRG 63
+ LL+ G VEL+N + G++V+ D +MN+ + +V+ + DG++ M +I+
Sbjct: 18 VCLLRAVVGRITTVELRNECSATGYVVDVDGFMNVTMSKVLFVNMDGEK-THMDSIFIQA 76
Query: 64 NTIKYLRVPDEV--IDKVQEETKSRSDRKP 91
+ ++Y+++PD++ + +++E + R+P
Sbjct: 77 SLVRYVQIPDDINMVKAMKKELMMMNPRRP 106
>gi|388583883|gb|EIM24184.1| Sm-like ribonucleo protein, partial [Wallemia sebi CBS 633.66]
Length = 115
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC-----YIRGNTIKYLRV 71
+ELKNG +G ++NCD MN HLR V +++ +P C IRGN I+Y+ +
Sbjct: 10 IELKNGSVVHGTMINCDPSMNAHLRSVKLITRN------LPACNLDTISIRGNNIRYVIL 63
Query: 72 PDEV 75
PD +
Sbjct: 64 PDSL 67
>gi|448524829|ref|XP_003869020.1| Smd1 protein [Candida orthopsilosis Co 90-125]
gi|380353373|emb|CCG22883.1| Smd1 protein [Candida orthopsilosis]
Length = 116
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 10 AQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYL 69
+ P+ VELKNG NG L++C MN++L+ V K D + +RGN I+ +
Sbjct: 13 STNQPVTVELKNGNIINGTLLSCTPSMNLNLKNVKLQQKYQDPIL-LQYINVRGNQIRQI 71
Query: 70 RVPDEV-IDKVQEETKSR 86
+P+++ ID V E+++++
Sbjct: 72 LLPEDLNIDSVLEKSQTK 89
>gi|403224047|dbj|BAM42177.1| snRNP protein [Theileria orientalis strain Shintoku]
Length = 119
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
P+ LL GH + +EL+N Y G L N + MN L V T+KDG R + + Y+R
Sbjct: 6 PVKLLYEGIGHIVTIELQNSNLYRGTLTNVEDNMNCLLEGVTMTTKDG-RTLALEQVYLR 64
Query: 63 GNTIKYLRVPDEV 75
G I ++ PD +
Sbjct: 65 GAQILFMIFPDML 77
>gi|402591762|gb|EJW85691.1| small nuclear ribonucleoprotein LSM2 [Wuchereria bancrofti]
Length = 99
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
ML S K+ G ++VELKN + G L + D ++N+ L ++ T D +R+ M
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDISVT--DSERYPHMLSVK 58
Query: 58 ECYIRGNTIKYLRVPDEVID 77
C+IRG+ ++Y+++P + +D
Sbjct: 59 NCFIRGSVVRYVQLPADQVD 78
>gi|326933035|ref|XP_003212615.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like
[Meleagris gallopavo]
Length = 123
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
LL+ GH V+L++ T G + N D +MN+ L +V T + G ++ E ++ G
Sbjct: 20 LLQGLHGHVTTVDLRDESTATGRVANVDAFMNMRLAQVTFTDRRG-VVSQLDEIFVAGRN 78
Query: 66 IKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRG 101
++Y+ +PD+V + ++ +R+ + R R G
Sbjct: 79 VRYVHIPDQV------DIRATIERQLQAIHRVRYFG 108
>gi|432882999|ref|XP_004074183.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like isoform 1
[Oryzias latipes]
gi|432883001|ref|XP_004074184.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like isoform 2
[Oryzias latipes]
Length = 134
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 4 LSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRG 63
+ LL+ QG V+L++ + G ++N D +MNI L++V+ + G + ++ + +I G
Sbjct: 30 VVLLQGLQGEVTTVDLRDESSARGLVLNVDAFMNIRLKDVLFLDRRG-QTAQLQDLFITG 88
Query: 64 NTIKYLRVPDEV-IDKVQEETKSRSDRKPPGVGRGRGR 100
++Y+ +PD V I K E ++ R G G GR
Sbjct: 89 RNVRYVHIPDHVDIMKTMESQLAKIHRVRNFAGEGGGR 126
>gi|353239883|emb|CCA71776.1| related to LSM2-Sm-like (Lsm) protein [Piriformospora indica DSM
11827]
Length = 94
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREV-ICTSKDGDRFWRMPEC 59
ML S+ KT H + VELKN G L + D ++NI L + + ++ + C
Sbjct: 1 MLIFSVFKTLTDHTVTVELKNDLCITGVLKSVDQYLNIRLDAIKVENAEQHPHMMAVKNC 60
Query: 60 YIRGNTIKYLRVPDEVID 77
+IRG+ I+Y+++P +D
Sbjct: 61 FIRGSVIRYVQLPASAMD 78
>gi|393212701|gb|EJC98200.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 119
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L + +ELKNG +G + D MN HL+ V T ++ D + IRGN
Sbjct: 6 FLMKLNNETVTIELKNGSIVHGTITGVDMQMNTHLKTVKMTMRNRDP-QSLDTLSIRGNN 64
Query: 66 IKYLRVPDEV-IDK--VQEETKSRSDRKPPGVGRGRGRGRED 104
I+Y +PD + +D V + K ++ +K GRGRGR D
Sbjct: 65 IRYFVLPDALPLDTLLVDDAPKPKNRKKEEVRGRGRGRAVVD 106
>gi|402589501|gb|EJW83433.1| small nuclear ribonucleoprotein Sm D1 [Wuchereria bancrofti]
Length = 123
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG G +V D MN HLR V T K+ + + IRGN
Sbjct: 7 LMKLAH-ESVTIELKNGTLVTGTIVGVDVAMNTHLRTVKMTLKNREPV-SLDSLSIRGNN 64
Query: 66 IKYLRVPDEV-IDKVQEETKSRSDRKPPGVGRGR 98
I+Y+ +PD + +D + + + R +KP GRGR
Sbjct: 65 IRYIILPDTIPLDTLLVDDEPR--KKPARGGRGR 96
>gi|312077152|ref|XP_003141177.1| hypothetical protein LOAG_05592 [Loa loa]
gi|307763656|gb|EFO22890.1| hypothetical protein LOAG_05592 [Loa loa]
Length = 147
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 18/124 (14%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M+ + L + +ELKNG G++ D MN HL V T K+ + +
Sbjct: 10 MMLMRFLMRLHDKFVTIELKNGTVVTGYVSGVDMAMNFHLNRVGMTLKN-QKPVSLDAVS 68
Query: 61 IRGNTIKYLRVPDEV------IDKVQEETKSRSDRKPP----------GVGRGRGRGRED 104
+RGN I+Y+ P+ + ID Q++ ++R P GV RG GRGR
Sbjct: 69 VRGNNIRYIIFPNNLNLDALMIDVPQQKARTRKTPSQPRGQSNAIRGQGVTRG-GRGRNS 127
Query: 105 GASG 108
G G
Sbjct: 128 GKFG 131
>gi|429329451|gb|AFZ81210.1| LSM domain-containing protein [Babesia equi]
Length = 121
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL GH + EL+N + Y G L N + MN L V T KDG + + + Y+
Sbjct: 5 IPVKLLYEGIGHIVTAELQNSQLYRGTLTNVEDNMNCLLEGVTLTMKDG-KTLALEQVYL 63
Query: 62 RGNTIKYLRVPD 73
RG+ I+++ PD
Sbjct: 64 RGSQIRFMVFPD 75
>gi|196006814|ref|XP_002113273.1| hypothetical protein TRIADDRAFT_8416 [Trichoplax adhaerens]
gi|190583677|gb|EDV23747.1| hypothetical protein TRIADDRAFT_8416, partial [Trichoplax
adhaerens]
Length = 101
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ +L A+GH + +E +GE Y G L + MN + V T +DG R + + ++
Sbjct: 5 IPVKILHEAEGHVITLETVSGEVYRGKLSEAEDNMNCQMYSVNVTYRDG-RTAYLQQIFV 63
Query: 62 RGNTIKYLRVPD 73
RG+ ++++ +PD
Sbjct: 64 RGSKVRFIVIPD 75
>gi|68473251|ref|XP_719431.1| hypothetical protein CaO19.7673 [Candida albicans SC5314]
gi|46441248|gb|EAL00547.1| hypothetical protein CaO19.7673 [Candida albicans SC5314]
gi|238880442|gb|EEQ44080.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 116
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 10 AQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYL 69
+ P+ VELKNG +G L++C+ MN+HL+ V D + IRGN ++ +
Sbjct: 13 STNQPITVELKNGNIISGTLLSCNPSMNLHLKNVRLQQPLQDPIL-LQYINIRGNQVRQI 71
Query: 70 RVPDEVIDKVQEETKSRSDRKPPGVGRGRG 99
+PDE+ E ++S+ K G G G G
Sbjct: 72 LLPDEL---NIESVLAKSETKIKGSGAGPG 98
>gi|412990430|emb|CCO19748.1| Small nuclear ribonucleoprotein Sm D3 [Bathycoccus prasinos]
Length = 131
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
LSL KT VELK+GE Y G LV + N L V T++DG + + CY+
Sbjct: 36 FSLSLTKTFLSCAQQVELKSGELYRGTLVEAEDNWNCQLTNVSHTARDG-KHSSLENCYL 94
Query: 62 RGNTIKYLRVPDEV-----IDKVQEETKS 85
RG+ I+ + VPD + K+ TKS
Sbjct: 95 RGSKIRMVIVPDMLKNAPMFKKIDPRTKS 123
>gi|237839011|ref|XP_002368803.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211966467|gb|EEB01663.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221481300|gb|EEE19694.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii GT1]
gi|221502024|gb|EEE27770.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii VEG]
Length = 121
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
+++ELKNG +G +V D MN HL+ V T K G+ + IRGN I+Y +PD
Sbjct: 15 LVIELKNGTVIHGTVVGVDISMNTHLKNVKMTMKQGNP-TSLEHLTIRGNNIRYFILPDS 73
Query: 75 V 75
+
Sbjct: 74 L 74
>gi|255542740|ref|XP_002512433.1| conserved hypothetical protein [Ricinus communis]
gi|223548394|gb|EEF49885.1| conserved hypothetical protein [Ricinus communis]
Length = 107
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 45/89 (50%), Gaps = 20/89 (22%)
Query: 56 MPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGASGRQTKGIG 115
MPECYIRGNTIKYL VPDE G +G+ A+ R
Sbjct: 1 MPECYIRGNTIKYLHVPDE-----------------KATWSGLCKGKRWKAAKRHW---A 40
Query: 116 RGLDDGGAKGAGGGRGRGGPGGKPGGSRG 144
G+DDG AKG GGGRG+G GK +RG
Sbjct: 41 CGIDDGVAKGTGGGRGKGVSAGKTVANRG 69
>gi|401400718|ref|XP_003880841.1| sm protein, related [Neospora caninum Liverpool]
gi|325115253|emb|CBZ50808.1| sm protein, related [Neospora caninum Liverpool]
Length = 121
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
+++ELKNG +G +V D MN HL+ V T K G+ + IRGN I+Y +PD
Sbjct: 15 LVIELKNGTVIHGTVVGVDISMNTHLKNVKMTLKHGNP-TSLEHLTIRGNNIRYFILPDS 73
Query: 75 V 75
+
Sbjct: 74 L 74
>gi|449273124|gb|EMC82732.1| U7 snRNA-associated Sm-like protein LSm10 [Columba livia]
Length = 123
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
LL+ +G V+L++ T G + N D +MN+ L EV T + G + E ++ G
Sbjct: 20 LLQGLRGLVTTVDLRDESTATGRVTNVDAFMNVRLAEVTYTDRQGA-VSHLDELFVTGRN 78
Query: 66 IKYLRVPDEV 75
++Y+ +PDEV
Sbjct: 79 VRYVHIPDEV 88
>gi|296422411|ref|XP_002840754.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636977|emb|CAZ84945.1| unnamed protein product [Tuber melanosporum]
Length = 79
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 36 MNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVG 95
MN+ LR++ T++DG R + + YIRG+ +++ VPD + + +++ R GVG
Sbjct: 1 MNVQLRDITVTARDG-RVSHLDQVYIRGSHVRFFIVPDMLRNAPMFRSRAVRGR---GVG 56
Query: 96 RGRGRGREDGASGRQTKGIGRG 117
RGR + A G+Q +G GRG
Sbjct: 57 LARGRATVNRARGQQNRG-GRG 77
>gi|224082027|ref|XP_002198423.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Taeniopygia guttata]
Length = 123
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
LL+ +G VEL++ G + + D +MN+ L EV T + G ++ E ++ G
Sbjct: 20 LLQGLRGRVTTVELRDESAAAGRVTSVDAFMNVRLAEVTFTDRQGA-VSQLDELFVTGRN 78
Query: 66 IKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
I+Y+ +PDEV + E + ++ + G GR +GR +
Sbjct: 79 IRYVHIPDEVDIRATIEEQLQAIHRVRYFG-GRDKGRRE 116
>gi|169617530|ref|XP_001802179.1| hypothetical protein SNOG_11947 [Phaeosphaeria nodorum SN15]
gi|111059239|gb|EAT80359.1| hypothetical protein SNOG_11947 [Phaeosphaeria nodorum SN15]
Length = 137
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L Q + VELKNG NG + + MN+ LR V T K D + +RG+T
Sbjct: 6 FLMKCQNETVTVELKNGSIVNGTITSVSPLMNVALRTVKYTPKSRDTVT-LDSMTVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y+ +PD +
Sbjct: 65 IRYIILPDSL 74
>gi|357623693|gb|EHJ74743.1| small nuclear ribonucleoprotein Sm D1 [Danaus plexippus]
Length = 125
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNKEEL-QLETLSIRGNNIRYFLLPDSL 74
>gi|268531626|ref|XP_002630940.1| C. briggsae CBR-SNR-3 protein [Caenorhabditis briggsae]
Length = 127
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD 73
+ELKNG +G ++ D MN HLR V T K+ D ++ IRGN I+Y+ +PD
Sbjct: 17 IELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKDPV-KLDTLSIRGNNIRYIILPD 72
>gi|339250642|ref|XP_003374306.1| putative LSM domain protein [Trichinella spiralis]
gi|316969410|gb|EFV53511.1| putative LSM domain protein [Trichinella spiralis]
Length = 120
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HLR V T KDG ++ +RGN I+Y +P+ +
Sbjct: 17 IELKNGTILHGTISGVDVAMNTHLRAVKMTLKDGQTV-QLDVLSVRGNNIRYFILPETIP 75
Query: 76 IDKVQEETKSRSDRKP 91
+D+ + + RKP
Sbjct: 76 LDQYLVDDLPKPKRKP 91
>gi|149235059|ref|XP_001523408.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452817|gb|EDK47073.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 125
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 12 GHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRV 71
P+ VELKNG NG L++ + MN++L+ V D + IRGN I+ + +
Sbjct: 15 NQPITVELKNGNIVNGTLLSANPQMNLNLKNVKLQQLYQDPIL-LQYINIRGNQIRQILL 73
Query: 72 PDEV-IDKVQEETKSR 86
PD++ ID V E+++++
Sbjct: 74 PDDLNIDGVLEKSQTK 89
>gi|392589390|gb|EIW78721.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 125
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG NG + D MN HL+ V T+++ D + IRGN I+Y+ +PD +
Sbjct: 17 IELKNGSVVNGTITGVDMQMNTHLKTVKMTARNRDP-TSLDSLSIRGNNIRYIVLPDAL 74
>gi|326676382|ref|XP_003200562.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like [Danio
rerio]
Length = 120
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
LL+ G V+L++ T G ++N D +MNI L V+ + G R M + +I G
Sbjct: 20 LLQGLHGQVTTVDLRDESTARGRVINVDAFMNIRLENVLYRDRRG-RKSSMDDLFITGRN 78
Query: 66 IKYLRVPDEV 75
++Y+ +PD++
Sbjct: 79 VRYVHIPDQI 88
>gi|298709378|emb|CBJ31311.1| Small nuclear ribonucleoprotein-associated protein D3 [Ectocarpus
siliculosus]
Length = 177
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61
+P+ LL A+G + VELKNGE G L + MN+ L++ + T+ G + + + YI
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRG-KTSTLQQLYI 59
Query: 62 RGNTIKYLRVPD 73
RGN I + VP+
Sbjct: 60 RGNQIVFCIVPN 71
>gi|224082029|ref|XP_002198421.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Taeniopygia guttata]
Length = 123
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
LL+ +G VEL++ G + + D +MN+ L EV T + G ++ E ++ G
Sbjct: 20 LLQGLRGRVTTVELRDESAAAGRVTSVDAFMNVRLAEVTFTDRRGA-VSQLDELFVTGRN 78
Query: 66 IKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGRED 104
I+Y+ +PDEV + E + ++ + G GR +GR +
Sbjct: 79 IRYVHIPDEVDIRATIEEQLQAIHRVRYFG-GRDKGRRE 116
>gi|330943683|ref|XP_003306243.1| hypothetical protein PTT_19359 [Pyrenophora teres f. teres 0-1]
gi|311316316|gb|EFQ85673.1| hypothetical protein PTT_19359 [Pyrenophora teres f. teres 0-1]
Length = 132
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L Q + VELKNG NG + + MN+ LR V T K D + +RG+T
Sbjct: 6 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYTPKSRDTVA-LDTMTVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y+ +PD +
Sbjct: 65 IRYIILPDSL 74
>gi|189200737|ref|XP_001936705.1| small nuclear ribonucleoprotein Sm D1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983804|gb|EDU49292.1| small nuclear ribonucleoprotein Sm D1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 132
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L Q + VELKNG NG + + MN+ LR V T K D + +RG+T
Sbjct: 6 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYTPKSRDTVA-LDTMTVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y+ +PD +
Sbjct: 65 IRYIILPDSL 74
>gi|145345472|ref|XP_001417233.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577460|gb|ABO95526.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 114
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+ + +ELKNG T +G ++ D MN HL++V T K G + +RGNT
Sbjct: 6 FLQKLSNESVTIELKNGTTAHGTIMGVDVSMNTHLKQVKLTLK-GKNPTAVEHLSVRGNT 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|255722764|ref|XP_002546316.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240130833|gb|EER30395.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 129
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 7 LKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTI 66
+ + P+ VELKNG +G +++C+ MN++L+ V D + IRGN +
Sbjct: 10 IPNSTNQPVTVELKNGNVISGTMLSCNPSMNLNLKNVKLQQPLQDPIL-LDFINIRGNQV 68
Query: 67 KYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDG 105
+ + +PDE+ E S+S+ K G G G G E
Sbjct: 69 RQIILPDEL---NIESVLSKSETKIKGQGAGPGAKPESN 104
>gi|296089996|emb|CBI39815.3| unnamed protein product [Vitis vinifera]
Length = 107
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G M +RGN I+Y +PD +
Sbjct: 10 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTMDHLSVRGNNIRYYILPDSIN 68
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P GR
Sbjct: 69 LETLLVEETPRVKPKKPTAGR 89
>gi|302770463|ref|XP_002968650.1| hypothetical protein SELMODRAFT_145785 [Selaginella
moellendorffii]
gi|302816441|ref|XP_002989899.1| hypothetical protein SELMODRAFT_235902 [Selaginella
moellendorffii]
gi|300142210|gb|EFJ08912.1| hypothetical protein SELMODRAFT_235902 [Selaginella
moellendorffii]
gi|300163155|gb|EFJ29766.1| hypothetical protein SELMODRAFT_145785 [Selaginella
moellendorffii]
Length = 114
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG NG + D MN HL+ V K G M IRGN I+Y +PD +
Sbjct: 17 IELKNGTIVNGTITGVDISMNTHLKAVKLVLK-GKNPVTMDHLSIRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + + R +K P G+
Sbjct: 76 LETLLVDDTPRVKQKKPAAGK 96
>gi|290988841|ref|XP_002677099.1| predicted protein [Naegleria gruberi]
gi|284090705|gb|EFC44355.1| predicted protein [Naegleria gruberi]
Length = 118
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L G + +ELKNG G +V D MN HL+ V T K G + +RG+
Sbjct: 2 FLMKLSGESVTIELKNGTVIAGTIVGVDMSMNTHLKAVKMTLK-GKNPLPLEHMSVRGSN 60
Query: 66 IKYLRVPDEV-IDKVQEETKSRSDRKPPGVGRGRGRG 101
I+Y+ +P+ + +D + ++T K G+G +G
Sbjct: 61 IRYVILPETINLDNLLQDTTVHPKPKKKTAGQGPKKG 97
>gi|225462054|ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
vinifera]
Length = 114
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G M +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTMDHLSVRGNNIRYYILPDSIN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P GR
Sbjct: 76 LETLLVEETPRVKPKKPTAGR 96
>gi|403293073|ref|XP_003937547.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 [Saimiri
boliviensis boliviensis]
Length = 123
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 4 LSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRG 63
+ LL+ QG V+L++ +G + N D +MNI L EV T + G + ++ + ++ G
Sbjct: 18 IILLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAEVTYTDRWGHQV-KLDDLFVTG 76
Query: 64 NTIKYLRVPDEV-IDKVQEETKSRSDRKPPGVGRGRGR 100
++Y+ +PD+V I E+ R G+G+GR
Sbjct: 77 RNVRYVHIPDDVNITSTIEQQLQIIHRVRNFGGKGQGR 114
>gi|393234430|gb|EJD41993.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 123
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG NG + D MN HL+ V ++++ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGSVVNGTITGVDVQMNTHLKTVKLSTRNRDPV-SLDTLSIRGNNIRYFVLPDALP 75
Query: 76 IDK--VQEETKSRSDRK 90
+D V + K +S RK
Sbjct: 76 LDTLLVDDAPKPKSTRK 92
>gi|326511932|dbj|BAJ95947.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG T +G ++ D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTTVHGTIIGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEETPRVKPKKPTAGK 96
>gi|389609361|dbj|BAM18292.1| small ribonucleoprotein particle protein SmD1 [Papilio xuthus]
Length = 125
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNKEEL-QLETLSIRGNNIRYYLLPDSL 74
>gi|452004429|gb|EMD96885.1| hypothetical protein COCHEDRAFT_1163040 [Cochliobolus
heterostrophus C5]
Length = 130
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L Q + VELKNG NG + + MN+ LR V T K D + +RG+T
Sbjct: 6 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYTPKSRDTVA-LDTMTVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y+ +PD +
Sbjct: 65 IRYIILPDSL 74
>gi|451855386|gb|EMD68678.1| hypothetical protein COCSADRAFT_157089 [Cochliobolus sativus
ND90Pr]
Length = 131
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L Q + VELKNG NG + + MN+ LR V T K D + +RG+T
Sbjct: 6 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYTPKSRDTVA-LDTMTVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y+ +PD +
Sbjct: 65 IRYIILPDSL 74
>gi|302692404|ref|XP_003035881.1| hypothetical protein SCHCODRAFT_74336 [Schizophyllum commune
H4-8]
gi|300109577|gb|EFJ00979.1| hypothetical protein SCHCODRAFT_74336 [Schizophyllum commune
H4-8]
Length = 121
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T+++ D + +RGNTI+Y +PD +
Sbjct: 17 IELKNGSVVHGTITGVDMQMNTHLKTVKMTTRNRDP-THLDSLSLRGNTIRYFILPDAL 74
>gi|402589502|gb|EJW83434.1| Sm protein [Wuchereria bancrofti]
Length = 137
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
M+ + L + +ELKNG G++ + D MN HL V T K ++ M
Sbjct: 1 MMLMRFLMRLHDKFVTIELKNGTVVMGYVSSVDLAMNFHLNRVAMTLK-SEKPVSMDAVS 59
Query: 61 IRGNTIKYLRVPDEV------IDKVQEETKSR 86
IRGN I+Y+ P + ID Q+ K+R
Sbjct: 60 IRGNNIRYVIFPKNLNLDALMIDVPQQRKKTR 91
>gi|396483691|ref|XP_003841766.1| hypothetical protein LEMA_P096960.1 [Leptosphaeria maculans JN3]
gi|312218341|emb|CBX98287.1| hypothetical protein LEMA_P096960.1 [Leptosphaeria maculans JN3]
Length = 222
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L Q + VELKNG NG + + MN+ LR V T K D + +RG+T
Sbjct: 97 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYTPKSRDTVA-LDSMTVRGST 155
Query: 66 IKYLRVPDEV 75
I+Y+ +PD +
Sbjct: 156 IRYVILPDSL 165
>gi|449464778|ref|XP_004150106.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cucumis
sativus]
gi|449476727|ref|XP_004154817.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cucumis
sativus]
Length = 114
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G M +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKAVKLTLK-GKNPVTMDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P GR
Sbjct: 76 LETLLVEETPRVKPKKPTAGR 96
>gi|241959636|ref|XP_002422537.1| small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
gi|223645882|emb|CAX40545.1| small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
Length = 126
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 13 HPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVP 72
P+ VELKNG +G L++C+ MN++L+ V D + IRGN ++ + +P
Sbjct: 16 QPITVELKNGNIISGTLLSCNPPMNLNLKNVKLQQPLQDPIL-LQYINIRGNQVRQILLP 74
Query: 73 DEV-IDK--VQEETKSR 86
DE+ I+ V+ ETK +
Sbjct: 75 DELNIESVLVKSETKIK 91
>gi|341892180|gb|EGT48115.1| hypothetical protein CAEBREN_25098 [Caenorhabditis brenneri]
gi|341901485|gb|EGT57420.1| CBN-SNR-3 protein [Caenorhabditis brenneri]
Length = 126
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD 73
+ELKNG +G ++ D MN HLR V T K+ + ++ IRGN I+Y+ +PD
Sbjct: 17 IELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEPV-KLDTLSIRGNNIRYIILPD 72
>gi|308502654|ref|XP_003113511.1| CRE-SNR-3 protein [Caenorhabditis remanei]
gi|308263470|gb|EFP07423.1| CRE-SNR-3 protein [Caenorhabditis remanei]
Length = 127
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD 73
+ELKNG +G ++ D MN HLR V T K+ + ++ IRGN I+Y+ +PD
Sbjct: 17 IELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEPV-KLDTLSIRGNNIRYIILPD 72
>gi|17536583|ref|NP_495306.1| Protein SNR-3 [Caenorhabditis elegans]
gi|2833218|sp|Q10013.1|SMD1_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein Sm D1;
Short=Sm-D1; AltName: Full=snRNP core protein D1
gi|351064345|emb|CCD72707.1| Protein SNR-3 [Caenorhabditis elegans]
Length = 126
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD 73
+ELKNG +G ++ D MN HLR V T K+ + ++ IRGN I+Y+ +PD
Sbjct: 17 IELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEPV-KLDTLSIRGNNIRYIILPD 72
>gi|339250640|ref|XP_003374305.1| putative LSM domain protein [Trichinella spiralis]
gi|316969411|gb|EFV53512.1| putative LSM domain protein [Trichinella spiralis]
Length = 154
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HLR V T KDG+ ++ +RGN I+Y +PD V
Sbjct: 49 IELKNGTILHGTVTGVDIAMNTHLRAVKMTMKDGETV-QLDVMSVRGNNIRYFILPDTV 106
>gi|125540070|gb|EAY86465.1| hypothetical protein OsI_07847 [Oryza sativa Indica Group]
Length = 114
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG T +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTTVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEDTPRVKAKKPTAGK 96
>gi|428673180|gb|EKX74093.1| small ribonucleoprotein D1, putative [Babesia equi]
Length = 119
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG G ++ D MN HL+ V KD + +RGN+I+Y +PD +
Sbjct: 17 LELKNGTVMTGTIIGIDISMNTHLKNVKIVKKDNSVIL-LDHLTVRGNSIRYYLLPDSI 74
>gi|170596751|ref|XP_001902883.1| Sm protein [Brugia malayi]
gi|158589165|gb|EDP28269.1| Sm protein [Brugia malayi]
Length = 130
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG G++ + D MN HL V T K ++ + IRGN I+Y+ P+ +
Sbjct: 10 IELKNGTVVMGYVSSVDLAMNFHLNRVSMTLK-SEKPASVDAVSIRGNNIRYIIFPNNLN 68
Query: 76 IDKVQEET--KSRSDRKPPGVGRGRG---RGREDGASGR 109
+D + + ++R RK G +G RG D SGR
Sbjct: 69 LDALMIDIPQQTRRTRKTSGQAHSQGVAVRGGRDRNSGR 107
>gi|224066521|ref|XP_002302121.1| predicted protein [Populus trichocarpa]
gi|118482633|gb|ABK93236.1| unknown [Populus trichocarpa]
gi|118488779|gb|ABK96200.1| unknown [Populus trichocarpa]
gi|222843847|gb|EEE81394.1| predicted protein [Populus trichocarpa]
Length = 115
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTVK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGRG 97
++ + E R K P GR
Sbjct: 76 LETLLVEETPRVKPKKPTAGRA 97
>gi|114050791|ref|NP_001040404.1| small nuclear ribonucleoprotein Sm D1 [Bombyx mori]
gi|95102768|gb|ABF51325.1| small nuclear ribonucleoprotein Sm D1 [Bombyx mori]
Length = 126
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNREEL-QLETLSIRGNNIRYYLLPDSL 74
>gi|326498561|dbj|BAJ98708.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 181
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG T +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTTVHGTITGVDISMNTHLKTVKLTMK-GKNPVTLDHISVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGRGRGR 100
++ + E R K P G+ GR
Sbjct: 76 LETLLVEDTPRVKSKKPTTGKPMGR 100
>gi|391333356|ref|XP_003741082.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Metaseiulus occidentalis]
Length = 120
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTVTGVDVAMNTHLKNVKMTLKNAAEPVSLETLSIRGNNIRYYILPDSL 75
>gi|242216937|ref|XP_002474272.1| predicted protein [Postia placenta Mad-698-R]
gi|220726564|gb|EED80509.1| predicted protein [Postia placenta Mad-698-R]
Length = 121
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T+++ + IRGNTI+Y +PD +
Sbjct: 17 IELKNGSVVHGTITGVDMQMNTHLKTVKLTARNREPMAH-ETLTIRGNTIRYFVLPDAI 74
>gi|17945870|gb|AAL48981.1| RE39488p [Drosophila melanogaster]
Length = 124
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDHV-HLETLSIRGNNIRYFILPDSL 74
>gi|357017089|gb|AET50573.1| hypothetical protein [Eimeria tenella]
Length = 125
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
+++ELKNG +G +V D MN HL+ V T K + M IRG+ I+Y +PD
Sbjct: 15 LVLELKNGTVVHGTIVGVDVAMNTHLKNVKLTVKHSNPV-SMDHLTIRGSNIRYFILPDS 73
Query: 75 V 75
+
Sbjct: 74 L 74
>gi|336375284|gb|EGO03620.1| hypothetical protein SERLA73DRAFT_175163 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388346|gb|EGO29490.1| hypothetical protein SERLADRAFT_457290 [Serpula lacrymans var.
lacrymans S7.9]
Length = 121
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L + +ELKNG +G + D MN HL+ V T+++ D + IRGN
Sbjct: 6 FLMKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKTVKMTTRNRDP-TSLDSLSIRGNN 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFVLPDAL 74
>gi|357149831|ref|XP_003575247.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Brachypodium distachyon]
Length = 114
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG T +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTTVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLIEETPRVKPKKPTAGK 96
>gi|115446977|ref|NP_001047268.1| Os02g0586500 [Oryza sativa Japonica Group]
gi|46806276|dbj|BAD17484.1| putative small nuclear ribonucleoprotein D1 polypeptide 16kDa;
snRNP core protein D1; Sm-D autoantigen [Oryza sativa
Japonica Group]
gi|113536799|dbj|BAF09182.1| Os02g0586500 [Oryza sativa Japonica Group]
gi|125582674|gb|EAZ23605.1| hypothetical protein OsJ_07305 [Oryza sativa Japonica Group]
Length = 114
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG T +G + D MN HL+ V T K G +RGN I+Y +PD +
Sbjct: 17 IELKNGTTVHGTITGVDISMNTHLKTVKLTLK-GKNPVTFDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEDTPRVKAKKPTAGK 96
>gi|213401339|ref|XP_002171442.1| small nuclear ribonucleoprotein Sm D1 [Schizosaccharomyces
japonicus yFS275]
gi|211999489|gb|EEB05149.1| small nuclear ribonucleoprotein Sm D1 [Schizosaccharomyces
japonicus yFS275]
Length = 114
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG NG + + D MN HL+ V T KD + + IRG+ ++Y +PD +
Sbjct: 17 IELKNGTIVNGTITSVDMQMNTHLKAVKMTVKDREP-VPLETLSIRGSNVRYFILPDSL 74
>gi|297848542|ref|XP_002892152.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337994|gb|EFH68411.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 117
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDVSMNTHLKAVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P GR
Sbjct: 76 LETLLVEDTPRIKPKKPTAGR 96
>gi|225436986|ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
[Vitis vinifera]
gi|225436988|ref|XP_002277231.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2
[Vitis vinifera]
Length = 114
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P GR
Sbjct: 76 LETLLVEETPRVKPKKPTAGR 96
>gi|56758868|gb|AAW27574.1| unknown [Schistosoma japonicum]
gi|226468946|emb|CAX76501.1| Small nuclear ribonucleoprotein Sm D1 [Schistosoma japonicum]
gi|226472888|emb|CAX71130.1| Small nuclear ribonucleoprotein Sm D1 [Schistosoma japonicum]
Length = 118
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN H+R V T K+ D + +RGN I+Y +P+ +
Sbjct: 10 IELKNGTQVHGSIAGVDVSMNTHMRSVTLTLKNRDAI-NLDTLTVRGNNIRYFILPESL 67
>gi|307165950|gb|EFN60277.1| Probable malonyl CoA-acyl carrier protein transacylase,
mitochondrial [Camponotus floridanus]
Length = 463
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
P L+K + + +ELKNG G + D MN HL+ V T K+ D ++ +R
Sbjct: 344 PRFLMKLSH-ETVTIELKNGTQVTGTITGVDVAMNTHLKTVKMTIKNRDPI-QLETLSLR 401
Query: 63 GNTIKYLRVPDEV 75
GN I+Y +PD +
Sbjct: 402 GNNIRYYILPDSL 414
>gi|195160693|ref|XP_002021209.1| GL24936 [Drosophila persimilis]
gi|194118322|gb|EDW40365.1| GL24936 [Drosophila persimilis]
Length = 118
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D + IRGN I+Y +PD +
Sbjct: 10 IELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPV-HLESLSIRGNNIRYFILPDSL 67
>gi|313226324|emb|CBY21468.1| unnamed protein product [Oikopleura dioica]
gi|313241294|emb|CBY33571.1| unnamed protein product [Oikopleura dioica]
Length = 127
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG G + D MN HL+ V T K G ++ IRGN I+Y +PD V
Sbjct: 17 IELKNGTQVVGTIAGVDICMNTHLKNVRLTVK-GREPQQLDALSIRGNNIRYYILPDSV 74
>gi|321455706|gb|EFX66832.1| hypothetical protein DAPPUDRAFT_302421 [Daphnia pulex]
Length = 125
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
+++ELKNG +G + D MN HL+ V T K+ D ++ IRGN I+Y +PD
Sbjct: 15 VIIELKNGTQVHGTITGVDVAMNTHLKAVKMTVKNRDPV-QLETLSIRGNNIRYYILPDS 73
Query: 75 V 75
+
Sbjct: 74 L 74
>gi|320168484|gb|EFW45383.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 131
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
++VELKNG G +V D MN LR V T K+ D + IRGN I++ +PD
Sbjct: 15 VIVELKNGTVVQGTIVGVDHLMNTMLRNVKLTVKNKDPV-SLETLSIRGNNIRHYILPDS 73
Query: 75 V-IDKVQ-EETKSRSDRK 90
+ +D + EE +S +K
Sbjct: 74 LPLDSLLIEEVPKKSTKK 91
>gi|255559488|ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus
communis]
gi|223540149|gb|EEF41726.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus
communis]
Length = 114
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P GR
Sbjct: 76 LETLLVEETPRVKPKKPTAGR 96
>gi|443922492|gb|ELU41935.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 122
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G L D MN HL+ V TS++ + + IRGN I+Y +PD +
Sbjct: 17 VELKNGSVVHGTLTGVDVQMNTHLKNVKLTSRNREP-TALDTLSIRGNNIRYFVLPDAL 74
>gi|195019728|ref|XP_001985042.1| GH14721 [Drosophila grimshawi]
gi|193898524|gb|EDV97390.1| GH14721 [Drosophila grimshawi]
Length = 124
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + D MN HL+ V T K+ D + IRGN I+Y +PD +
Sbjct: 17 VELKNGTQIHGTITGVDVAMNTHLKSVKMTIKNRDPV-HLESLSIRGNNIRYFILPDSL 74
>gi|56757319|gb|AAW26831.1| SJCHGC01415 protein [Schistosoma japonicum]
gi|226468936|emb|CAX76496.1| Small nuclear ribonucleoprotein Sm D1 [Schistosoma japonicum]
Length = 127
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN H+R V T K+ D + +RGN I+Y +P+ +
Sbjct: 19 IELKNGTQVHGSIAGVDVSMNTHMRSVTLTLKNRDAI-NLDTLTVRGNNIRYFILPESL 76
>gi|389747560|gb|EIM88738.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 123
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T+++ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGSIVHGTITGVDMQMNTHLKTVKMTARNRDP-SSLDSLSIRGNNIRYFVLPDSL 74
>gi|226468938|emb|CAX76497.1| Small nuclear ribonucleoprotein Sm D1 [Schistosoma japonicum]
gi|226468940|emb|CAX76498.1| Small nuclear ribonucleoprotein Sm D1 [Schistosoma japonicum]
gi|226468942|emb|CAX76499.1| Small nuclear ribonucleoprotein Sm D1 [Schistosoma japonicum]
gi|226468944|emb|CAX76500.1| Small nuclear ribonucleoprotein Sm D1 [Schistosoma japonicum]
gi|226472890|emb|CAX71131.1| Small nuclear ribonucleoprotein Sm D1 [Schistosoma japonicum]
gi|226472892|emb|CAX71132.1| Small nuclear ribonucleoprotein Sm D1 [Schistosoma japonicum]
Length = 125
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN H+R V T K+ D + +RGN I+Y +P+ +
Sbjct: 17 IELKNGTQVHGSIAGVDVSMNTHMRSVTLTLKNRDAI-NLDTLTVRGNNIRYFILPESL 74
>gi|198464926|ref|XP_001353417.2| GA10544 [Drosophila pseudoobscura pseudoobscura]
gi|198149939|gb|EAL30924.2| GA10544 [Drosophila pseudoobscura pseudoobscura]
Length = 125
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPV-HLESLSIRGNNIRYFILPDSL 74
>gi|409048487|gb|EKM57965.1| hypothetical protein PHACADRAFT_251891 [Phanerochaete carnosa
HHB-10118-sp]
Length = 122
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T+++ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGSIVHGTITGVDMQMNTHLKTVKMTARNRDP-TSLDSLSIRGNNIRYFVLPDAL 74
>gi|195126373|ref|XP_002007645.1| GI12268 [Drosophila mojavensis]
gi|193919254|gb|EDW18121.1| GI12268 [Drosophila mojavensis]
Length = 124
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + D MN HL+ V T K+ D + IRGN I+Y +PD +
Sbjct: 17 VELKNGTQIHGTITGVDVAMNTHLKSVKMTIKNRDPV-HLESLSIRGNNIRYFILPDSL 74
>gi|412985751|emb|CCO16951.1| predicted protein [Bathycoccus prasinos]
Length = 158
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+ + +ELKNG T +G ++ D MN HL+ V T K G + IRGNT
Sbjct: 42 FLQKLNNETVTIELKNGTTCSGTILGVDISMNTHLKSVKLTVK-GRNPQTLDHLSIRGNT 100
Query: 66 IKYLRVPDEV 75
I+Y +P+ +
Sbjct: 101 IRYYILPESL 110
>gi|317135015|gb|ADV03070.1| SmD1 protein [Amphidinium carterae]
Length = 111
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L ++VELKN +G + D MN H++ + T K G M IRGN
Sbjct: 6 FLMKLSNESVVVELKNSTVVSGTITGVDVSMNTHMKNIKFTVK-GKPPIAMDHLTIRGNN 64
Query: 66 IKYLRVPDEV-IDKVQEETKSRS 87
I+Y+ +PD + +D + E R+
Sbjct: 65 IRYVVLPDSIPLDTLLIEDSKRA 87
>gi|170064026|ref|XP_001867355.1| small nuclear ribonucleoprotein Sm D1 [Culex quinquefasciatus]
gi|167881462|gb|EDS44845.1| small nuclear ribonucleoprotein Sm D1 [Culex quinquefasciatus]
Length = 126
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVAMNTHLKAVKMTIKNRDPV-QLDSLSIRGNNIRYYILPDSL 74
>gi|294950553|ref|XP_002786687.1| small nuclear ribonucleoprotein D1, putative [Perkinsus marinus
ATCC 50983]
gi|239900979|gb|EER18483.1| small nuclear ribonucleoprotein D1, putative [Perkinsus marinus
ATCC 50983]
Length = 114
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+ + VELKNG +G + D MN H++ V T + G M IRG+T
Sbjct: 6 FLQKLNSETVTVELKNGTVVHGTVTGVDVSMNTHMKNVKVTVR-GRNPVGMDHLTIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDHI 74
>gi|443713219|gb|ELU06184.1| hypothetical protein CAPTEDRAFT_162674 [Capitella teleta]
Length = 126
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTMVHGTITGVDVSMNTHLKSVKMTIKNRDPI-QLDTLSIRGNNIRYYLLPDSL 74
>gi|159486837|ref|XP_001701443.1| small nuclear ribonucleoprotein Sm D1 [Chlamydomonas reinhardtii]
gi|158271625|gb|EDO97440.1| small nuclear ribonucleoprotein Sm D1 [Chlamydomonas reinhardtii]
Length = 114
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG G + D MN HL+ V T++ G M +RGN I+Y +PD +
Sbjct: 13 IELKNGTVIQGTIAGVDIAMNTHLKAVKLTAR-GKNPVSMDHLSVRGNNIRYYILPDSL 70
>gi|157105264|ref|XP_001648790.1| small nuclear ribonucleoprotein sm d1 [Aedes aegypti]
gi|157118312|ref|XP_001653165.1| small nuclear ribonucleoprotein sm d1 [Aedes aegypti]
gi|108880134|gb|EAT44359.1| AAEL004263-PA [Aedes aegypti]
gi|108883288|gb|EAT47513.1| AAEL001382-PA [Aedes aegypti]
Length = 126
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVAMNTHLKAVKMTIKNRDPV-QLDSLSIRGNNIRYYILPDSL 74
>gi|17864386|ref|NP_524774.1| small ribonucleoprotein particle protein SmD1 [Drosophila
melanogaster]
gi|194747611|ref|XP_001956245.1| GF25112 [Drosophila ananassae]
gi|195327205|ref|XP_002030312.1| GM24635 [Drosophila sechellia]
gi|195493908|ref|XP_002094615.1| GE20102 [Drosophila yakuba]
gi|195589894|ref|XP_002084684.1| GD12704 [Drosophila simulans]
gi|33112453|sp|Q9VU02.1|SMD1_DROME RecName: Full=Probable small nuclear ribonucleoprotein Sm D1;
Short=Sm-D1; AltName: Full=snRNP core protein D1
gi|7294552|gb|AAF49893.1| small ribonucleoprotein particle protein SmD1 [Drosophila
melanogaster]
gi|189181777|gb|ACD81665.1| FI02845p [Drosophila melanogaster]
gi|190623527|gb|EDV39051.1| GF25112 [Drosophila ananassae]
gi|194119255|gb|EDW41298.1| GM24635 [Drosophila sechellia]
gi|194180716|gb|EDW94327.1| GE20102 [Drosophila yakuba]
gi|194196693|gb|EDX10269.1| GD12704 [Drosophila simulans]
Length = 124
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPV-HLETLSIRGNNIRYFILPDSL 74
>gi|194870009|ref|XP_001972567.1| GG13810 [Drosophila erecta]
gi|190654350|gb|EDV51593.1| GG13810 [Drosophila erecta]
Length = 124
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPV-HLETLSIRGNNIRYFILPDSL 74
>gi|294944597|ref|XP_002784335.1| small nuclear ribonucleoprotein D1, putative [Perkinsus marinus
ATCC 50983]
gi|239897369|gb|EER16131.1| small nuclear ribonucleoprotein D1, putative [Perkinsus marinus
ATCC 50983]
Length = 114
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+ + VELKNG +G + D MN H++ V T + G M IRG+T
Sbjct: 6 FLQKLNSETVTVELKNGTVVHGTVTGVDVSMNTHMKNVKVTVR-GRNPVGMDHLTIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDHI 74
>gi|297602887|ref|NP_001053049.2| Os04g0470200 [Oryza sativa Japonica Group]
gi|38344744|emb|CAE03048.2| OSJNBa0089K21.2 [Oryza sativa Japonica Group]
gi|116310018|emb|CAH67043.1| OSIGBa0124N08.5 [Oryza sativa Indica Group]
gi|222629031|gb|EEE61163.1| hypothetical protein OsJ_15131 [Oryza sativa Japonica Group]
gi|255675540|dbj|BAF14963.2| Os04g0470200 [Oryza sativa Japonica Group]
Length = 114
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEDTPRVKAKKPTAGK 96
>gi|296086730|emb|CBI32365.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 47 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 105
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P GR
Sbjct: 106 LETLLVEETPRVKPKKPTAGR 126
>gi|112253614|gb|ABI14393.1| small nuclear riboprotein Sm-D1 [Karlodinium micrum]
Length = 112
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L ++VELKN G + D MN H++ V T K G+ M IRGN
Sbjct: 6 FLMKLSNESVVVELKNSTVVAGTITGVDVSMNTHMKNVKFTVK-GEPPVSMDHLTIRGNN 64
Query: 66 IKYLRVPDEV 75
++Y+ +PD +
Sbjct: 65 VRYVILPDSI 74
>gi|307198074|gb|EFN79127.1| Probable small nuclear ribonucleoprotein Sm D1 [Harpegnathos
saltator]
Length = 123
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG NG + D MN HL+ V T K+ D ++ +RGN I+Y +PD +
Sbjct: 17 IELKNGTQVNGTITGVDVAMNTHLKTVKMTIKNRDPV-QLETLSLRGNNIRYYILPDSL 74
>gi|221125651|ref|XP_002163302.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Hydra
magnipapillata]
Length = 128
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
VELKNG +G + D MN HL+ V T K D ++ IRGN I+Y +P+ +
Sbjct: 17 VELKNGTVAHGTITGVDMSMNTHLKAVKMTLKGKDPV-QLETLSIRGNNIRYFILPESLP 75
Query: 76 IDK--VQEETKSRS 87
+D V +E KS++
Sbjct: 76 LDTLLVDDEPKSKA 89
>gi|72005990|ref|XP_785584.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Strongylocentrotus purpuratus]
Length = 132
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKSVKLTPKNRET-QQLESLSIRGNNIRYYILPDSL 74
>gi|242022404|ref|XP_002431630.1| small nuclear ribonucleoprotein sm D1, putative [Pediculus
humanus corporis]
gi|212516938|gb|EEB18892.1| small nuclear ribonucleoprotein sm D1, putative [Pediculus
humanus corporis]
Length = 122
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + + IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVAMNTHLKAVKMTIKNKEPVM-LETLTIRGNNIRYFILPDSL 74
>gi|414586803|tpg|DAA37374.1| TPA: hypothetical protein ZEAMMB73_218857 [Zea mays]
Length = 108
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 10 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 68
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 69 LETLLVEETPRVKPKKPTTGK 89
>gi|413918616|gb|AFW58548.1| hypothetical protein ZEAMMB73_336389 [Zea mays]
Length = 109
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 10 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 68
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 69 LETLLVEETPRVKPKKPTTGK 89
>gi|83272157|gb|ABC00745.1| putative small nuclear ribonucleoprotein D1 [Brassica napus]
Length = 118
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G M +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDVSMNTHLKTVKMTLK-GKNPVTMDHLSLRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEDTPRLKPKKPVAGK 96
>gi|52345462|ref|NP_001004780.1| small nuclear ribonucleoprotein Sm D1 [Xenopus (Silurana)
tropicalis]
gi|148227202|ref|NP_001085322.1| small nuclear ribonucleoprotein Sm D1 [Xenopus laevis]
gi|49250837|gb|AAH74514.1| MGC69276 protein [Xenopus (Silurana) tropicalis]
gi|49255946|gb|AAH71069.1| MGC78968 protein [Xenopus laevis]
gi|76779906|gb|AAI06262.1| MGC78968 protein [Xenopus laevis]
gi|118835457|gb|AAI28954.1| MGC78968 protein [Xenopus laevis]
Length = 119
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 VELKNGTQVHGTITGVDVSMNTHLKAVKMTVKNREPV-QLETLSIRGNNIRYFILPDSL 74
>gi|426195101|gb|EKV45031.1| hypothetical protein AGABI2DRAFT_73218, partial [Agaricus
bisporus var. bisporus H97]
Length = 118
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + D MN HL+ V T+++ + + IRGN I+Y +PD +
Sbjct: 13 VELKNGSLVHGTITGVDMQMNTHLKTVKMTTRNREP-QTLDSLSIRGNNIRYFTLPDAL 70
>gi|405973300|gb|EKC38022.1| Small nuclear ribonucleoprotein Sm D1 [Crassostrea gigas]
Length = 688
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D ++ IRGN I+Y +PD +
Sbjct: 584 IELKNGTQVHGTVTGVDVCMNTHLKAVKMTIKNKDPV-QVDTLSIRGNNIRYYILPDSL 641
>gi|32959908|emb|CAE11897.1| small nuclear ribonucleoprotein Sm D1 [Homo sapiens]
Length = 119
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 15 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE 74
+++ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD
Sbjct: 15 VIIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDS 73
Query: 75 V 75
+
Sbjct: 74 L 74
>gi|303277487|ref|XP_003058037.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460694|gb|EEH57988.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 116
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G ++ D MN HL+ V T K G M +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTIMGVDISMNTHLKNVKMTLK-GKNPVSMDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKP 91
+D + + + KP
Sbjct: 76 LDTLLVDDTPKIKSKP 91
>gi|224082616|ref|XP_002306766.1| predicted protein [Populus trichocarpa]
gi|222856215|gb|EEE93762.1| predicted protein [Populus trichocarpa]
Length = 112
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTVK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E + K P GR
Sbjct: 76 LETLLIEETPKVKPKKPTAGR 96
>gi|168068658|ref|XP_001786159.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662031|gb|EDQ49029.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 111
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + IRGN I+Y +PD +
Sbjct: 13 IELKNGTIVHGTITGVDISMNTHLKSVKLTLK-GKVPVSLDHLSIRGNNIRYYILPDSLN 71
Query: 76 IDKVQEETKSRSDRKPPGVG 95
+D + + R K P G
Sbjct: 72 LDTLLVDDTPRVKAKKPVAG 91
>gi|15235510|ref|NP_192193.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
gi|4263519|gb|AAD15345.1| small nuclear riboprotein Sm-D1 [Arabidopsis thaliana]
gi|7269769|emb|CAB77769.1| small nuclear riboprotein Sm-D1-like protein [Arabidopsis
thaliana]
gi|21536940|gb|AAM61281.1| small nuclear riboprotein Sm-D1-like protein [Arabidopsis
thaliana]
gi|26450421|dbj|BAC42325.1| putative small nuclear riboprotein Sm-D1 [Arabidopsis thaliana]
gi|114050553|gb|ABI49426.1| At4g02840 [Arabidopsis thaliana]
gi|332656836|gb|AEE82236.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
Length = 116
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDVSMNTHLKAVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEDTPRIKPKKPTAGK 96
>gi|332225775|ref|XP_003262059.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Nomascus
leucogenys]
Length = 119
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G ++ D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTILGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 74
>gi|395329081|gb|EJF61470.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 112
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + D MN HL+ V T+++ + + IRGN I+Y +PD +
Sbjct: 10 VELKNGSVIHGTITGVDMQMNTHLKTVKMTARNREP-TSLDSLSIRGNNIRYFVLPDAL 67
>gi|291394184|ref|XP_002713641.1| PREDICTED: small nuclear ribonucleoprotein D1 polypeptide
16kDa-like [Oryctolagus cuniculus]
Length = 236
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 134 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP-VQLETLSIRGNNIRYFILPDSL 191
>gi|357440765|ref|XP_003590660.1| Small nuclear ribonucleoprotein Sm D1 [Medicago truncatula]
gi|355479708|gb|AES60911.1| Small nuclear ribonucleoprotein Sm D1 [Medicago truncatula]
Length = 114
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEEAPRVKPKKPTAGK 96
>gi|409074771|gb|EKM75161.1| hypothetical protein AGABI1DRAFT_80275 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 122
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + D MN HL+ V T+++ + + IRGN I+Y +PD +
Sbjct: 17 VELKNGSLVHGTITGVDMQMNTHLKTVKMTTRNREP-QTLDSLSIRGNNIRYFTLPDAL 74
>gi|168034120|ref|XP_001769561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679103|gb|EDQ65554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 114
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN H++ V T K G + IRGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHMKSVKLTLK-GKVPVALDHLSIRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
+D + + R K P G+
Sbjct: 76 LDTLLVDDTPRVKSKKPVAGK 96
>gi|158285999|ref|XP_308555.4| AGAP007246-PA [Anopheles gambiae str. PEST]
gi|157020260|gb|EAA04383.5| AGAP007246-PA [Anopheles gambiae str. PEST]
Length = 126
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVAMNTHLKAVKMTIKNRDPVT-LDSLSIRGNNIRYYILPDSL 74
>gi|226507836|ref|NP_001151154.1| LOC100284787 [Zea mays]
gi|195644674|gb|ACG41805.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
Length = 116
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEETPRVKPKKPTTGK 96
>gi|226496545|ref|NP_001148353.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
gi|195618318|gb|ACG30989.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
gi|414586802|tpg|DAA37373.1| TPA: small nuclear ribonucleoprotein Sm D1 [Zea mays]
Length = 115
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEETPRVKPKKPTTGK 96
>gi|392562210|gb|EIW55391.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 122
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + D MN HL+ V T+++ + + IRGN I+Y +PD +
Sbjct: 17 VELKNGSVIHGTITGVDMQMNTHLKTVKMTARNREP-TSLDSLSIRGNNIRYFVLPDAL 74
>gi|301090235|ref|XP_002895342.1| small nuclear ribonucleoprotein Sm D1 [Phytophthora infestans
T30-4]
gi|262100456|gb|EEY58508.1| small nuclear ribonucleoprotein Sm D1 [Phytophthora infestans
T30-4]
Length = 105
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K G + IRGN I+Y +PD +
Sbjct: 10 IELKNGTLVHGTITGVDISMNTHLKAVKMTVK-GKNPVNLDSLSIRGNNIRYYILPDSL 67
>gi|432105433|gb|ELK31648.1| Small nuclear ribonucleoprotein Sm D1 [Myotis davidii]
Length = 221
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 119 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP-VQLETLSIRGNNIRYFILPDSL 176
>gi|410910972|ref|XP_003968964.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Takifugu
rubripes]
Length = 119
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKAVKMTPKNREP-TQLESLSIRGNNIRYFILPDSL 74
>gi|168013855|ref|XP_001759481.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689411|gb|EDQ75783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 114
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKSVKLTLK-GKVPVALDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
+D + + R K P G+
Sbjct: 76 LDTLLVDDTPRVKVKKPVAGK 96
>gi|440897495|gb|ELR49167.1| hypothetical protein M91_06507, partial [Bos grunniens mutus]
Length = 121
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 12 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 69
>gi|388508844|gb|AFK42488.1| unknown [Medicago truncatula]
Length = 115
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVG 95
++ + E R K P G
Sbjct: 76 LETLLVEEAPRVKPKKPTAG 95
>gi|363730104|ref|XP_001235936.2| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Gallus gallus]
Length = 112
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 10 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 67
>gi|325188130|emb|CCA22672.1| small nuclear ribonucleoprotein Sm D1 putative [Albugo laibachii
Nc14]
Length = 114
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T+K G + IRGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKAVKMTAK-GKNPQTLDTLSIRGNNIRYYILPDSL 74
>gi|149626991|ref|XP_001507555.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Ornithorhynchus anatinus]
Length = 125
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKD-----GDRFWRMPECYIRGNTIKYLRV 71
+ELKNG G ++ D MN HL+ V +K G F + IRGN+I+Y +
Sbjct: 17 IELKNGTVLTGIVLGVDISMNTHLKNVKIVNKTKAASKGPNFILLDHLTIRGNSIRYFIL 76
Query: 72 PDEV 75
D +
Sbjct: 77 SDSL 80
>gi|403221309|dbj|BAM39442.1| small ribonucleoprotein D1 [Theileria orientalis strain Shintoku]
Length = 125
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD-----RFWRMPECY 60
L+K A + VELKNG G ++ D MN HL+ V +K+ D +
Sbjct: 7 LMKLA-NESVTVELKNGTVLTGTVIGIDISMNTHLKNVKVVNKNSDGKDGPNVVLLDHLT 65
Query: 61 IRGNTIKYLRVPDEV 75
+RGN I+Y + D +
Sbjct: 66 VRGNNIRYFILSDSI 80
>gi|388509846|gb|AFK42989.1| unknown [Lotus japonicus]
Length = 116
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVG 95
++ + E R K P G
Sbjct: 76 LETLLVEETPRVKPKKPTAG 95
>gi|355721054|gb|AES07137.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Mustela
putorius furo]
Length = 139
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 37 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 94
>gi|351709761|gb|EHB12680.1| Small nuclear ribonucleoprotein Sm D1, partial [Heterocephalus
glaber]
Length = 115
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 13 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 70
>gi|302423008|ref|XP_003009334.1| pentatricopeptide repeat protein [Verticillium albo-atrum
VaMs.102]
gi|261352480|gb|EEY14908.1| pentatricopeptide repeat protein [Verticillium albo-atrum
VaMs.102]
Length = 710
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 22/59 (37%)
Query: 49 DGDRFWRMPECYIRGNT----------------------IKYLRVPDEVIDKVQEETKS 85
+GD+F ++PE Y++GN IKYLRVPD++ID V+E ++
Sbjct: 2 EGDKFVKIPEVYVKGNNVRLHLFSSIRPSANARLIAGLQIKYLRVPDDIIDIVKENQQN 60
>gi|27545253|ref|NP_775359.1| small nuclear ribonucleoprotein Sm D1 [Danio rerio]
gi|21105451|gb|AAM34669.1|AF506225_1 small nuclear ribonucleoprotein D1 [Danio rerio]
gi|47938075|gb|AAH71543.1| Snrpd1 protein [Danio rerio]
Length = 119
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP-TQLESLSIRGNNIRYFILPDSL 74
>gi|149720998|ref|XP_001492698.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Equus
caballus]
Length = 116
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 14 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 71
>gi|116784296|gb|ABK23291.1| unknown [Picea sitchensis]
Length = 114
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKSPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGRG 97
++ + E + K P GR
Sbjct: 76 LETLLVEDTPKIKPKRPTAGRA 97
>gi|348513171|ref|XP_003444116.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Oreochromis niloticus]
gi|432883312|ref|XP_004074261.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Oryzias
latipes]
Length = 119
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP-TQLESLSIRGNNIRYFILPDSL 74
>gi|326922125|ref|XP_003207302.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein
Sm D1-like [Meleagris gallopavo]
Length = 118
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 16 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 73
>gi|5902102|ref|NP_008869.1| small nuclear ribonucleoprotein Sm D1 [Homo sapiens]
gi|6678055|ref|NP_033252.1| small nuclear ribonucleoprotein Sm D1 [Mus musculus]
gi|78050059|ref|NP_001030237.1| small nuclear ribonucleoprotein Sm D1 [Bos taurus]
gi|157818069|ref|NP_001099633.1| small nuclear ribonucleoprotein Sm D1 [Rattus norvegicus]
gi|350535747|ref|NP_001232444.1| putative small nuclear ribonucleoprotein D1 [Taeniopygia guttata]
gi|386780612|ref|NP_001247758.1| small nuclear ribonucleoprotein Sm D1 [Macaca mulatta]
gi|57089749|ref|XP_537302.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Canis lupus
familiaris]
gi|114672526|ref|XP_512054.2| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Pan
troglodytes]
gi|126321779|ref|XP_001363297.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Monodelphis domestica]
gi|296222369|ref|XP_002757161.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Callithrix
jacchus]
gi|297702359|ref|XP_002828147.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Pongo abelii]
gi|301785950|ref|XP_002928390.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Ailuropoda
melanoleuca]
gi|311259030|ref|XP_003127902.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Sus
scrofa]
gi|327282141|ref|XP_003225802.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Anolis
carolinensis]
gi|348576770|ref|XP_003474159.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cavia
porcellus]
gi|354481732|ref|XP_003503055.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cricetulus
griseus]
gi|395511627|ref|XP_003760058.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Sarcophilus
harrisii]
gi|395823105|ref|XP_003784837.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Otolemur
garnettii]
gi|397489347|ref|XP_003815691.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Pan paniscus]
gi|403265201|ref|XP_003924835.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 isoform 1
[Saimiri boliviensis boliviensis]
gi|403265203|ref|XP_003924836.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410977436|ref|XP_003995111.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Felis catus]
gi|426253705|ref|XP_004020533.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Ovis aries]
gi|51338665|sp|P62314.1|SMD1_HUMAN RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=Sm-D autoantigen; AltName: Full=snRNP
core protein D1
gi|60413325|sp|P62315.1|SMD1_MOUSE RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=Sm-D autoantigen; AltName: Full=snRNP
core protein D1
gi|75076018|sp|Q4R5F6.1|SMD1_MACFA RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=snRNP core protein D1
gi|109894869|sp|Q3ZC10.1|SMD1_BOVIN RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=snRNP core protein D1
gi|6980598|pdb|1B34|A Chain A, Crystal Structure Of The D1d2 Sub-Complex From The Human
Snrnp Core Domain
gi|225734042|pdb|3CW1|B Chain B, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734051|pdb|3CW1|M Chain M, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734060|pdb|3CW1|N Chain N, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734069|pdb|3CW1|O Chain O, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583602|pdb|3PGW|X Chain X, Crystal Structure Of Human U1 Snrnp
gi|315583611|pdb|3PGW|U Chain U, Crystal Structure Of Human U1 Snrnp
gi|332639434|pdb|2Y9A|B Chain B, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639441|pdb|2Y9A|I Chain I, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639448|pdb|2Y9A|P Chain P, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639458|pdb|2Y9B|B Chain B, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639465|pdb|2Y9B|I Chain I, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639472|pdb|2Y9B|P Chain P, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639482|pdb|2Y9C|B Chain B, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639489|pdb|2Y9C|I Chain I, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639496|pdb|2Y9C|P Chain P, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639506|pdb|2Y9D|B Chain B, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639513|pdb|2Y9D|I Chain I, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639520|pdb|2Y9D|P Chain P, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781210|pdb|3S6N|A Chain A, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302196|pdb|4F7U|A Chain A, Macromolecular Machine 6
gi|444302198|pdb|4F7U|C Chain C, Macromolecular Machine 6
gi|453055422|pdb|1VU2|A Chain A, The 8s Snrnp Assembly Intermediate
gi|453055430|pdb|1VU2|I Chain I, The 8s Snrnp Assembly Intermediate
gi|453055438|pdb|1VU2|Q Chain Q, The 8s Snrnp Assembly Intermediate
gi|453055446|pdb|1VU2|Y Chain Y, The 8s Snrnp Assembly Intermediate
gi|453055454|pdb|1VU2|GG Chain g, The 8s Snrnp Assembly Intermediate
gi|453055462|pdb|1VU2|OO Chain o, The 8s Snrnp Assembly Intermediate
gi|453055474|pdb|1VU2|WW Chain w, The 8s Snrnp Assembly Intermediate
gi|453055478|pdb|1VU3|A Chain A, The 8s Snrnp Assembly Intermediate
gi|453055486|pdb|1VU3|I Chain I, The 8s Snrnp Assembly Intermediate
gi|453055494|pdb|1VU3|Q Chain Q, The 8s Snrnp Assembly Intermediate
gi|453055502|pdb|1VU3|Y Chain Y, The 8s Snrnp Assembly Intermediate
gi|453055510|pdb|1VU3|GG Chain g, The 8s Snrnp Assembly Intermediate
gi|453055518|pdb|1VU3|OO Chain o, The 8s Snrnp Assembly Intermediate
gi|453056010|pdb|4F77|I Chain I, The 8s Snrnp Assembly Intermediate
gi|453056018|pdb|4F77|A Chain A, The 8s Snrnp Assembly Intermediate
gi|453056026|pdb|4F77|Q Chain Q, The 8s Snrnp Assembly Intermediate
gi|453056034|pdb|4F77|Y Chain Y, The 8s Snrnp Assembly Intermediate
gi|453056042|pdb|4F77|GG Chain g, The 8s Snrnp Assembly Intermediate
gi|453056050|pdb|4F77|OO Chain o, The 8s Snrnp Assembly Intermediate
gi|453056062|pdb|4F77|WW Chain w, The 8s Snrnp Assembly Intermediate
gi|338265|gb|AAA36620.1| small nuclear riboprotein Sm-D [Homo sapiens]
gi|705366|gb|AAA85339.1| small nuclear ribonucleoprotein [Homo sapiens]
gi|1256741|gb|AAA96493.1| Sm-D autoantigen [Mus musculus]
gi|12804599|gb|AAH01721.1| Small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|12838127|dbj|BAB24092.1| unnamed protein product [Mus musculus]
gi|12841366|dbj|BAB25178.1| unnamed protein product [Mus musculus]
gi|12847588|dbj|BAB27628.1| unnamed protein product [Mus musculus]
gi|12850214|dbj|BAB28635.1| unnamed protein product [Mus musculus]
gi|19354162|gb|AAH24875.1| Small nuclear ribonucleoprotein D1 [Mus musculus]
gi|48734707|gb|AAH72427.1| Small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|49457472|emb|CAG47035.1| SNRPD1 [Homo sapiens]
gi|67970653|dbj|BAE01669.1| unnamed protein product [Macaca fascicularis]
gi|73586929|gb|AAI02988.1| Small nuclear ribonucleoprotein D1 polypeptide 16kDa [Bos taurus]
gi|74144965|dbj|BAE22192.1| unnamed protein product [Mus musculus]
gi|74193588|dbj|BAE22759.1| unnamed protein product [Mus musculus]
gi|119621535|gb|EAX01130.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|149031722|gb|EDL86672.1| small nuclear ribonucleoprotein D1 (predicted) [Rattus
norvegicus]
gi|187469818|gb|AAI67095.1| Small nuclear ribonucleoprotein D1 [Rattus norvegicus]
gi|197127450|gb|ACH43948.1| putative small nuclear ribonucleoprotein D1 [Taeniopygia guttata]
gi|197127451|gb|ACH43949.1| putative small nuclear ribonucleoprotein D1 [Taeniopygia guttata]
gi|197129948|gb|ACH46446.1| putative small nuclear ribonucleoprotein D1 [Taeniopygia guttata]
gi|197692155|dbj|BAG70041.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|197692401|dbj|BAG70164.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|208967432|dbj|BAG73730.1| small nuclear ribonucleoprotein D1 polypeptide [synthetic
construct]
gi|296473819|tpg|DAA15934.1| TPA: small nuclear ribonucleoprotein Sm D1 [Bos taurus]
gi|344251470|gb|EGW07574.1| Small nuclear ribonucleoprotein Sm D1 [Cricetulus griseus]
gi|380815842|gb|AFE79795.1| small nuclear ribonucleoprotein Sm D1 [Macaca mulatta]
gi|383420995|gb|AFH33711.1| small nuclear ribonucleoprotein Sm D1 [Macaca mulatta]
gi|384948966|gb|AFI38088.1| small nuclear ribonucleoprotein Sm D1 [Macaca mulatta]
gi|410215894|gb|JAA05166.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Pan
troglodytes]
gi|410253718|gb|JAA14826.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Pan
troglodytes]
gi|410297902|gb|JAA27551.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Pan
troglodytes]
gi|410328399|gb|JAA33146.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Pan
troglodytes]
Length = 119
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 74
>gi|260819208|ref|XP_002604929.1| hypothetical protein BRAFLDRAFT_264344 [Branchiostoma floridae]
gi|229290258|gb|EEN60939.1| hypothetical protein BRAFLDRAFT_264344 [Branchiostoma floridae]
Length = 121
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 VELKNGTQVHGTITGVDVSMNTHLKAVKMTIKNREPV-QLDSLSIRGNNIRYFILPDSL 74
>gi|170095247|ref|XP_001878844.1| small nuclear ribonucleoprotein SnRNP [Laccaria bicolor S238N-H82]
gi|164646148|gb|EDR10394.1| small nuclear ribonucleoprotein SnRNP [Laccaria bicolor S238N-H82]
Length = 127
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVI 76
+ELKNG +G + D MN HL+ V T ++ D + IRGNT++Y +PD
Sbjct: 17 IELKNGCIVHGTITGVDMQMNTHLKTVKMTMRNRDP-TTLDSLSIRGNTVRYFVLPDA-- 73
Query: 77 DKVQEETKSRSDRKPPGVGRGRGRGREDG 105
+ +T D P +GR +ED
Sbjct: 74 --LPLDTLLVDDAPKP-----KGRKKEDA 95
>gi|60832252|gb|AAX37003.1| small nuclear ribonucleoprotein D1 polypeptide [synthetic
construct]
Length = 120
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 74
>gi|358339785|dbj|GAA47780.1| small nuclear ribonucleoprotein D1 [Clonorchis sinensis]
Length = 124
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HLR V T K+ + + +RGN I+Y +P+ +
Sbjct: 17 MELKNGTQVHGSIAGVDVSMNTHLRSVTVTLKNRES-MNLDTLTVRGNNIRYFILPESL 74
>gi|431896295|gb|ELK05711.1| Small nuclear ribonucleoprotein Sm D1 [Pteropus alecto]
Length = 122
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 20 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 77
>gi|449269384|gb|EMC80160.1| Small nuclear ribonucleoprotein Sm D1, partial [Columba livia]
Length = 117
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 15 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP-VQLETLSIRGNNIRYFILPDSL 72
>gi|148691046|gb|EDL22993.1| mCG14669, isoform CRA_b [Mus musculus]
Length = 134
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 32 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 89
>gi|346324354|gb|EGX93951.1| small nuclear ribonucleoprotein Sm D1 [Cordyceps militaris CM01]
Length = 119
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L P+ +ELKNG NG + + MN LR V T + G + IRG+T
Sbjct: 6 FLMKCVNEPVTIELKNGTIVNGTISSVTPQMNTALRTVKMTPR-GQEPISLDTMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|242065592|ref|XP_002454085.1| hypothetical protein SORBIDRAFT_04g024330 [Sorghum bicolor]
gi|195604664|gb|ACG24162.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
gi|238011798|gb|ACR36934.1| unknown [Zea mays]
gi|241933916|gb|EES07061.1| hypothetical protein SORBIDRAFT_04g024330 [Sorghum bicolor]
gi|413922841|gb|AFW62773.1| Small nuclear ribonucleoprotein Sm D1 isoform 1 [Zea mays]
gi|413922842|gb|AFW62774.1| Small nuclear ribonucleoprotein Sm D1 isoform 2 [Zea mays]
Length = 114
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEETPRVKPKKPTSGK 96
>gi|294463522|gb|ADE77290.1| unknown [Picea sitchensis]
Length = 114
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKIPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEDTPRIKPKKPTAGK 96
>gi|440903491|gb|ELR54142.1| Small nuclear ribonucleoprotein Sm D1, partial [Bos grunniens
mutus]
Length = 117
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 15 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 72
>gi|355701859|gb|EHH29212.1| Small nuclear ribonucleoprotein Sm D1, partial [Macaca mulatta]
gi|355754930|gb|EHH58797.1| Small nuclear ribonucleoprotein Sm D1, partial [Macaca
fascicularis]
Length = 119
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 74
>gi|156086674|ref|XP_001610746.1| small nuclear ribonucleoprotein Sm subunit [Babesia bovis T2Bo]
gi|154797999|gb|EDO07178.1| small nuclear ribonucleoprotein Sm subunit, putative [Babesia
bovis]
Length = 125
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDG-----DRFWRMPECYIRGNTIKYLRV 71
VELKNG G ++ D MN HL+ V +KD + + +RGN I+Y +
Sbjct: 17 VELKNGTVLTGTVIGVDISMNTHLKNVKIVNKDSGSGSEPNYILLDHLTVRGNNIRYFIL 76
Query: 72 PDEV 75
D +
Sbjct: 77 SDSL 80
>gi|400602721|gb|EJP70323.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 119
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L P+ +ELKNG NG + + MN LR V T + D + IRG+T
Sbjct: 6 FLMKCVNEPVTIELKNGTIVNGTISSVTPQMNTALRTVKMTPRGQDPI-SLDTMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|198437112|ref|XP_002129287.1| PREDICTED: similar to AGAP007246-PA isoform 1 [Ciona
intestinalis]
gi|198437114|ref|XP_002129303.1| PREDICTED: similar to AGAP007246-PA isoform 2 [Ciona
intestinalis]
Length = 121
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDICMNTHLKSVKMTVKNRDPV-NLDTLSIRGNNIRYYILPDSL 74
>gi|363814443|ref|NP_001242856.1| uncharacterized protein LOC100778485 [Glycine max]
gi|255640505|gb|ACU20538.1| unknown [Glycine max]
Length = 114
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGAVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E + K P G+
Sbjct: 76 LETLLVEEAPKIKPKKPTAGK 96
>gi|356504916|ref|XP_003521240.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
[Glycine max]
gi|356504918|ref|XP_003521241.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2
[Glycine max]
Length = 114
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E + K P G+
Sbjct: 76 LETLLVEEAPKIKPKKPTAGK 96
>gi|195435704|ref|XP_002065819.1| GK18761 [Drosophila willistoni]
gi|194161904|gb|EDW76805.1| GK18761 [Drosophila willistoni]
Length = 124
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T ++ D + IRGN ++Y +PD +
Sbjct: 17 IELKNGTQIHGTITGVDVAMNTHLKSVRMTIRNRDPV-HLESLSIRGNNVRYFILPDSL 74
>gi|291243481|ref|XP_002741624.1| PREDICTED: small nuclear ribonucleoprotein D1 polypeptide
16kDa-like isoform 1 [Saccoglossus kowalevskii]
Length = 118
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG G + D MN HL+ V T ++ D ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTLVRGTITGVDVSMNTHLKAVKMTVRNKDPV-QIDTLSIRGNNIRYFILPDSL 74
>gi|353238410|emb|CCA70357.1| probable small nuclear ribonucleoprotein SNRPD1 [Piriformospora
indica DSM 11827]
Length = 123
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T+++ D + IRGN I+Y +PD +
Sbjct: 17 IELKNGSIVHGTITGVDMQMNTHLKTVRLTARNRDP-QPLDSLSIRGNNIRYFILPDAL 74
>gi|241644572|ref|XP_002409661.1| small nuclear ribonucleoprotein Sm D1, putative [Ixodes
scapularis]
gi|215501397|gb|EEC10891.1| small nuclear ribonucleoprotein Sm D1, putative [Ixodes
scapularis]
Length = 111
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 10 IELKNGTQVHGTITGVDVAMNTHLKAVKMTMKNREPV-QLDSLSIRGNNIRYYLLPDSL 67
>gi|388516873|gb|AFK46498.1| unknown [Lotus japonicus]
Length = 115
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RG I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKAVKLTLK-GKNPVTLDHLSVRGTNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E R K P G+
Sbjct: 76 LETLLVEEAPRVKSKKPTAGK 96
>gi|255637946|gb|ACU19289.1| unknown [Glycine max]
Length = 116
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYVLPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E + K P G+
Sbjct: 76 LETLLVEETPKIKPKKPTAGK 96
>gi|401884158|gb|EJT48330.1| hypothetical protein A1Q1_02613 [Trichosporon asahii var. asahii
CBS 2479]
Length = 264
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDG---DRFWRMPECYIRGNTIKYLRVPD 73
+ELKNG +G + + D MN HL+ V + ++ + IRGN I+Y +PD
Sbjct: 159 IELKNGSVIHGTITSVDPQMNTHLKSVKMSLRNAAPNTPSTHLDSIAIRGNNIRYFILPD 218
Query: 74 EV 75
+
Sbjct: 219 SL 220
>gi|356499683|ref|XP_003518666.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
[Glycine max]
Length = 116
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E + K P G+
Sbjct: 76 LETLLVEETPKIKPKKPTAGK 96
>gi|359806624|ref|NP_001241019.1| uncharacterized protein LOC100819089 [Glycine max]
gi|255647733|gb|ACU24327.1| unknown [Glycine max]
Length = 115
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDISMNTHLKTVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGR 96
++ + E + K P G+
Sbjct: 76 LETLLVEETPKIKPKKPTAGK 96
>gi|427786235|gb|JAA58569.1| Putative small nuclear ribonucleoprotein d1 [Rhipicephalus
pulchellus]
Length = 120
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVAMNTHLKAVKMTMKNREPV-QLDSLSIRGNNIRYYLLPDSL 74
>gi|442757617|gb|JAA70967.1| Putative small nuclear ribonucleoprotein d1 [Ixodes ricinus]
Length = 118
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVAMNTHLKAVKMTMKNREPV-QLDSLSIRGNNIRYYLLPDSL 74
>gi|328873443|gb|EGG21810.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 185
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 4 LSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRG 63
L L + +ELKNG +G +V D MN HL+ V T K G + IRG
Sbjct: 37 LRFLMKLHNETVTIELKNGTIIHGTIVGVDVSMNTHLKTVKLTLK-GKNPINLDTLSIRG 95
Query: 64 NTIKYLRVPDEV 75
N I+Y +P+ +
Sbjct: 96 NNIRYYILPESL 107
>gi|255075581|ref|XP_002501465.1| predicted protein [Micromonas sp. RCC299]
gi|226516729|gb|ACO62723.1| predicted protein [Micromonas sp. RCC299]
Length = 117
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG G ++ D MN HL+ V T K G M +RGN I+Y +PD +
Sbjct: 17 IELKNGTVIAGTIMGVDVSMNTHLKNVKMTLK-GKNPVSMDHLSVRGNNIRYYILPDSL 74
>gi|307111075|gb|EFN59310.1| hypothetical protein CHLNCDRAFT_29459 [Chlorella variabilis]
Length = 115
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE-- 74
+ELKNG G + D MN HL+ V K G + + IRGN I+Y +PD
Sbjct: 18 IELKNGTVVYGTITGVDVAMNTHLKTVKLVPK-GQNPITVAQMSIRGNNIRYYILPDSLN 76
Query: 75 ----VIDKVQEETKSRSDRKP 91
++D Q +T+ + +P
Sbjct: 77 LDTLLVDLDQPKTRPKRPERP 97
>gi|15231485|ref|NP_187416.1| small nuclear ribonucleoprotein D1 [Arabidopsis thaliana]
gi|334185166|ref|NP_001189837.1| small nuclear ribonucleoprotein D1 [Arabidopsis thaliana]
gi|6466942|gb|AAF13077.1|AC009176_4 putative small nuclear ribonucleoprotein (Sm-D1) [Arabidopsis
thaliana]
gi|17978995|gb|AAL47458.1| AT3g07590/MLP3_4 [Arabidopsis thaliana]
gi|21593161|gb|AAM65110.1| putative small nuclear ribonucleoprotein Sm-D1 [Arabidopsis
thaliana]
gi|21700847|gb|AAM70547.1| AT3g07590/MLP3_4 [Arabidopsis thaliana]
gi|332641049|gb|AEE74570.1| small nuclear ribonucleoprotein D1 [Arabidopsis thaliana]
gi|332641050|gb|AEE74571.1| small nuclear ribonucleoprotein D1 [Arabidopsis thaliana]
Length = 114
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V + K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTITGVDVSMNTHLKTVKMSLK-GKNPVTLDHLSLRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRKPPGVGRG 97
++ + E R K P G+
Sbjct: 76 LETLLVEDTPRVKPKKPVAGKA 97
>gi|328720327|ref|XP_003247002.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Acyrthosiphon pisum]
Length = 134
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY----IRGNTIKYLRVP 72
+ELKNG + +G + D MN HL+ V T K+ P Y +RGN I+Y +P
Sbjct: 17 LELKNGTSVHGTITGVDVAMNTHLKTVKMTMKNNQ-----PIHYDTLSVRGNNIRYFILP 71
Query: 73 DEVIDK---VQEETKSRSDR 89
D + + V + KSR +R
Sbjct: 72 DSLTLETLLVDDAPKSRLNR 91
>gi|428180768|gb|EKX49634.1| hypothetical protein GUITHDRAFT_151418 [Guillardia theta
CCMP2712]
Length = 117
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G +V D MN HL+ V T ++ + + IRG+ I+Y +PD +
Sbjct: 17 IELKNGSVVHGTIVGIDMAMNTHLKAVKLTMRNKTPV-PLEQLSIRGSNIRYYLLPDNL 74
>gi|66816135|ref|XP_642077.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|60470206|gb|EAL68186.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 131
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG G + D MN HL+ V T K G + IRGN I+Y +P+ +
Sbjct: 17 IELKNGTIVQGSVAGVDVSMNTHLKTVKLTLK-GKNPVNLDTLSIRGNNIRYFILPESL 74
>gi|326430943|gb|EGD76513.1| small nuclear ribonucleoprotein Sm D1 [Salpingoeca sp. ATCC 50818]
Length = 161
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + D MN+H++ V + K G + +RGNTI+++ +PD +
Sbjct: 61 VELKNGTVVHGTVAGVDVAMNMHMKTVKMSIK-GREATALDTLTVRGNTIRHVILPDSL 118
>gi|47028291|gb|AAT09078.1| small nuclear ribonucleoprotein Sm-D1 [Bigelowiella natans]
Length = 120
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE-- 74
VELKNG G + D MN HL+ V T K G + IRGN I+Y +PD
Sbjct: 17 VELKNGTVVQGTISGVDMSMNTHLKIVKMTLK-GKNPVHLDTLSIRGNNIRYFILPDSLN 75
Query: 75 ----VIDKVQEETKS 85
++++V+++T S
Sbjct: 76 LDALLVEEVKKKTTS 90
>gi|66509459|ref|XP_624938.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Apis mellifera]
gi|340728072|ref|XP_003402355.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Bombus terrestris]
gi|350424394|ref|XP_003493781.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Bombus impatiens]
gi|383861733|ref|XP_003706339.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Megachile rotundata]
Length = 123
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D ++ +RGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVAMNTHLKTVKMTIKNRDPV-QLDTLSLRGNNIRYYILPDSL 74
>gi|156538102|ref|XP_001608160.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Nasonia vitripennis]
Length = 123
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ D ++ +RGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVAMNTHLKTVKMTIKNRDPV-QLDTLSLRGNNIRYYILPDSL 74
>gi|296490547|tpg|DAA32660.1| TPA: small nuclear ribonucleoprotein D1 polypeptide 16kDa-like
[Bos taurus]
Length = 134
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ I+GN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIQGNNIRYFILPDSL 74
>gi|156369567|ref|XP_001628047.1| predicted protein [Nematostella vectensis]
gi|156215013|gb|EDO35984.1| predicted protein [Nematostella vectensis]
Length = 120
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +P+ +
Sbjct: 17 IELKNGTVIHGTITGVDMSMNTHLKTVKMTVKNREP-MQLESLSIRGNNIRYFILPESL 74
>gi|392577177|gb|EIW70307.1| hypothetical protein TREMEDRAFT_29897 [Tremella mesenterica DSM
1558]
Length = 126
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICT---SKDGDRFWRMPECYIRGNTIKYLRVPD 73
+ELKNG +G + + D M HL+ V T S G + IRGN I+Y +PD
Sbjct: 10 MELKNGTVIHGTITSVDPAMTTHLKSVKMTLRSSPPGTPPISLDSIAIRGNNIRYYVLPD 69
Query: 74 EV-IDKVQEETKSRSDRK 90
+ +D + + R+ ++
Sbjct: 70 SLPLDTLLVDDAPRAKKR 87
>gi|443897891|dbj|GAC75230.1| small nuclear ribonucleoprotein SMD1 and related snRNPs
[Pseudozyma antarctica T-34]
Length = 124
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T + G + IRGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTVTGVDIQMNTHLKTVKMTVR-GRPAVTLDTLSIRGNNIRYWILPDALP 75
Query: 76 --IDKVQEETKSRSDRKPPG 93
+ V + K + RK P
Sbjct: 76 LDMLLVDDAPKPKGKRKDPA 95
>gi|291401386|ref|XP_002717263.1| PREDICTED: small nuclear ribonucleoprotein D1 polypeptide
16kDa-like [Oryctolagus cuniculus]
Length = 144
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I Y +PD +
Sbjct: 42 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNICYFILPDSL 99
>gi|344269970|ref|XP_003406820.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Loxodonta
africana]
Length = 133
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 31 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 88
>gi|358391553|gb|EHK40957.1| hypothetical protein TRIATDRAFT_301687 [Trichoderma atroviride
IMI 206040]
Length = 120
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VELKNG +G + + MN+ LR V T++ D + IRG+TI+Y +PD +
Sbjct: 17 VELKNGTIVHGTISSVSPQMNVALRTVKMTARGQDSLA-LDTMNIRGSTIRYFILPDSL 74
>gi|19115525|ref|NP_594613.1| Sm snRNP core protein Smd1 [Schizosaccharomyces pombe 972h-]
gi|12230564|sp|O42661.1|SMD1_SCHPO RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=snRNP core protein D1
gi|2664241|emb|CAA15826.1| Sm snRNP core protein Smd1 [Schizosaccharomyces pombe]
Length = 117
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + + D MN HL+ V T K G + IRGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITSVDMQMNTHLKAVKMTVK-GREPVPVETLSIRGNNIRYYILPDSL 74
>gi|321252513|ref|XP_003192431.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|317458899|gb|ADV20644.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
Length = 121
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSK---DGDRFWRMPECYIRGNTIKYLRVPD 73
+ELKNG +G + + D MN HL+ V T + + IRGN I+Y +PD
Sbjct: 10 IELKNGTVIHGTITSVDPQMNTHLKSVKLTLRSQPSSQPPLSLDSIAIRGNNIRYFILPD 69
Query: 74 EV 75
+
Sbjct: 70 SL 71
>gi|58262702|ref|XP_568761.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108736|ref|XP_777021.1| hypothetical protein CNBB5470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259704|gb|EAL22374.1| hypothetical protein CNBB5470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223411|gb|AAW41454.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 121
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSK---DGDRFWRMPECYIRGNTIKYLRVPD 73
+ELKNG +G + + D MN HL+ V T + + IRGN I+Y +PD
Sbjct: 10 IELKNGTVIHGTITSVDPQMNTHLKSVKLTLRSQPSSQPPLSLDSIAIRGNNIRYFILPD 69
Query: 74 EV 75
+
Sbjct: 70 SL 71
>gi|71018117|ref|XP_759289.1| hypothetical protein UM03142.1 [Ustilago maydis 521]
gi|46099139|gb|EAK84372.1| hypothetical protein UM03142.1 [Ustilago maydis 521]
Length = 192
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T + G + IRGN I+Y +PD +
Sbjct: 84 IELKNGTVVHGTVTGVDIQMNTHLKTVKMTVR-GRPAVTLDTLSIRGNNIRYWILPDALP 142
Query: 76 --IDKVQEETKSRSDRKPPGVGRG 97
+ V + K + RK P V RG
Sbjct: 143 LDMLLVDDAPKPKGKRKDP-VARG 165
>gi|296473074|tpg|DAA15189.1| TPA: small nuclear ribonucleoprotein D1 polypeptide 16kDa-like
[Bos taurus]
Length = 119
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + + MN HL+ V T K+ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITCVNVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIRYFILPDSL 74
>gi|332028488|gb|EGI68529.1| Putative small nuclear ribonucleoprotein Sm D1 [Acromyrmex
echinatior]
Length = 116
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG G + D MN HL+ V T K+ + ++ +RGN I+Y +PD +
Sbjct: 10 IELKNGTQVTGTITGVDVAMNTHLKTVKMTIKNREPI-QLETLSLRGNNIRYYILPDSL 67
>gi|325303250|tpg|DAA34761.1| TPA_inf: small nuclear ribonucleoprotein SMD1 [Amblyomma
variegatum]
gi|346469165|gb|AEO34427.1| hypothetical protein [Amblyomma maculatum]
gi|346469167|gb|AEO34428.1| hypothetical protein [Amblyomma maculatum]
Length = 120
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T ++ + ++ IRGN I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVAMNTHLKAVKMTMRNREPV-QLDSLSIRGNNIRYYLLPDSL 74
>gi|346978140|gb|EGY21592.1| small nuclear ribonucleoprotein Sm D1 [Verticillium dahliae
VdLs.17]
Length = 121
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG NG + + MN LR V T+K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIVNGTISSVSPQMNTALRIVKMTTKGQDPIA-LDTMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|405118247|gb|AFR93021.1| pre-mRNA splicing factor [Cryptococcus neoformans var. grubii
H99]
Length = 129
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSK---DGDRFWRMPECYIRGNTIKYLRVPD 73
+ELKNG +G + + D MN HL+ V T + + IRGN I+Y +PD
Sbjct: 17 IELKNGTVIHGTITSVDPQMNTHLKSVKLTLRSQPSSQPPLSLDSIAIRGNNIRYFILPD 76
Query: 74 EV 75
+
Sbjct: 77 SL 78
>gi|422295210|gb|EKU22509.1| small nuclear ribonucleoprotein D1, partial [Nannochloropsis
gaditana CCMP526]
Length = 108
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L + +ELKNG T G + D MN +L+ V T K G IRGN
Sbjct: 6 FLMKLNNETVTIELKNGTTIQGTISGVDVSMNTYLKNVKVTLK-GKNPVSYESLSIRGNN 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDAL 74
>gi|407917344|gb|EKG10658.1| hypothetical protein MPH_12237 [Macrophomina phaseolina MS6]
Length = 122
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L Q + +ELKNG NG + + MN LR V T K+ + + IRG+
Sbjct: 6 FLMKCQNETVTIELKNGTVVNGTIASVSPTMNTALRTVKMTPKNRETMT-LDTINIRGSN 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|358420583|ref|XP_003584662.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Bos
taurus]
Length = 111
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K+ + ++ IRGN I Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIRGNNIWYFILPDSLP 75
Query: 76 IDK--VQEETKSRSDRK 90
+D V E K +S ++
Sbjct: 76 LDTLLVHVEPKVKSKKR 92
>gi|302411190|ref|XP_003003428.1| small nuclear ribonucleoprotein Sm D1 [Verticillium albo-atrum
VaMs.102]
gi|261357333|gb|EEY19761.1| small nuclear ribonucleoprotein Sm D1 [Verticillium albo-atrum
VaMs.102]
Length = 121
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG NG + + MN LR V T+K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIVNGTISSVSPQMNTALRIVKMTTKGQDPVA-LDTMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|425777993|gb|EKV16140.1| Small nuclear ribonucleoprotein SmD1, putative [Penicillium
digitatum Pd1]
gi|425780629|gb|EKV18635.1| Small nuclear ribonucleoprotein SmD1, putative [Penicillium
digitatum PHI26]
Length = 125
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + VELKNG +G +V+ MN LR V T K D + IRG+T
Sbjct: 7 LMKCAN-ETVTVELKNGTILHGTIVSVSPQMNTSLRAVKMTPKGRDTI-SLDTINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|196003304|ref|XP_002111519.1| hypothetical protein TRIADDRAFT_55621 [Trichoplax adhaerens]
gi|190585418|gb|EDV25486.1| hypothetical protein TRIADDRAFT_55621 [Trichoplax adhaerens]
Length = 130
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + + IRGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTVWGVDMSMNTHLKSVKMTVKNREPV-TLDTLAIRGNNIRYFILPDNL 74
>gi|320592072|gb|EFX04511.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 348
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K D + +RG+T
Sbjct: 223 LMKCAN-ETVTIELKNGTIVHGTIASVSPQMNTALRNVKMTPKGQDPV-PLDTINLRGST 280
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 281 IRYFILPDSL 290
>gi|358378050|gb|EHK15733.1| hypothetical protein TRIVIDRAFT_64379 [Trichoderma virens Gv29-8]
Length = 120
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN+ LR V T++ D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIVHGTISSVTPQMNVALRTVKMTARGQDSIA-LDTMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|300176808|emb|CBK25377.2| unnamed protein product [Blastocystis hominis]
Length = 100
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG G + D MN HL+ V T K G + +RG+ I+Y+ +PD +
Sbjct: 10 IELKNGTIIVGTITGVDVAMNTHLKAVKMTIK-GRNPVSLDSMSVRGSNIRYVILPDSI 67
>gi|164657680|ref|XP_001729966.1| hypothetical protein MGL_2952 [Malassezia globosa CBS 7966]
gi|159103860|gb|EDP42752.1| hypothetical protein MGL_2952 [Malassezia globosa CBS 7966]
Length = 120
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T + G+ + IRGN +Y +PD +
Sbjct: 17 IELKNGTVIHGTVTGVDVQMNTHLKAVKMTVRGGEPI-SLDTLSIRGNNTRYWILPDAL 74
>gi|340513813|gb|EGR44094.1| predicted protein [Trichoderma reesei QM6a]
Length = 120
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN+ LR V T++ D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIAHGTISSVTPQMNVALRTVKMTARGQDSIA-LDTMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|340381476|ref|XP_003389247.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Amphimedon queenslandica]
Length = 119
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +P+ V
Sbjct: 17 IELKNGTVVHGTVAGVDMSMNTHLKSVKLTLK-GREPLALDTLSLRGNNIRYYILPESVP 75
Query: 76 IDKVQEETKSRSDRKPPGVG 95
+D + + +R K V
Sbjct: 76 LDTLLVDDTTRRKTKKKEVA 95
>gi|388854491|emb|CCF51878.1| probable small nuclear ribonucleoprotein SNRPD1 [Ustilago hordei]
Length = 134
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T + G + IRGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGSVTGVDIQMNTHLKTVKMTLR-GRPAVALDTLSIRGNNIRYWILPDALP 75
Query: 76 --IDKVQEETKSRSDRKPP 92
+ V + K + RK P
Sbjct: 76 LDMLLVDDAPKPKGKRKEP 94
>gi|367042806|ref|XP_003651783.1| hypothetical protein THITE_2112439 [Thielavia terrestris NRRL
8126]
gi|346999045|gb|AEO65447.1| hypothetical protein THITE_2112439 [Thielavia terrestris NRRL
8126]
Length = 121
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K D + +RG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTVVHGTIASVSPQMNTALRNVKMTPKGQDAI-SLETLNVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|91093211|ref|XP_969739.1| PREDICTED: similar to small nuclear ribonucleoprotein at 69D
CG10753-PA [Tribolium castaneum]
gi|270016480|gb|EFA12926.1| hypothetical protein TcasGA2_TC010472 [Tribolium castaneum]
Length = 121
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + + +RGN I+Y +PD +
Sbjct: 17 MELKNGTQVHGTITGVDVAMNTHLKAVKVTVKNRNPV-NLDTLTVRGNNIRYYILPDSL 74
>gi|149250230|ref|XP_001481216.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2
[Mus musculus]
gi|309264642|ref|XP_003086326.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Mus
musculus]
Length = 119
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ I+G I+Y +PD +
Sbjct: 17 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIQGTNIRYFILPDSL 74
>gi|388854881|emb|CCF51562.1| probable small nuclear ribonucleoprotein SNRPD1 [Ustilago hordei]
Length = 134
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T + G + IRGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTVTGVDIQMNTHLKTVKMTLR-GRPAVALDTLSIRGNNIRYWILPDALP 75
Query: 76 --IDKVQEETKSRSDRKPP 92
+ V + K + RK P
Sbjct: 76 LDMLLVDDAPKPKGKRKEP 94
>gi|384496149|gb|EIE86640.1| small nuclear ribonucleoprotein Sm D1 [Rhizopus delemar RA
99-880]
Length = 108
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VE+KNG +G + D MN HL+ V T K+ D + IRGN I+ + +PD +
Sbjct: 10 VEMKNGTVVHGTITGVDMSMNTHLKTVKMTIKNRDPV-SLDSLSIRGNNIRCVILPDSL 67
>gi|326368279|ref|NP_001191919.1| small nuclear ribonucleoprotein Sm D1 [Acyrthosiphon pisum]
Length = 135
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY----IRGNTIKYLRVP 72
+ELKNG + +G + D MN HL+ V T ++ + P Y IRGN I+Y +P
Sbjct: 17 LELKNGTSVHGTITGVDVAMNTHLKAVKMTVRN-----QQPIHYETLSIRGNNIRYYILP 71
Query: 73 DEV 75
D +
Sbjct: 72 DSL 74
>gi|239789454|dbj|BAH71352.1| ACYPI007411 [Acyrthosiphon pisum]
Length = 122
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY----IRGNTIKYLRVP 72
+ELKNG + +G + D MN HL+ V T ++ + P Y IRGN I+Y +P
Sbjct: 17 LELKNGTSVHGTITGVDVAMNTHLKAVKMTVRN-----QQPIHYETLSIRGNNIRYYILP 71
Query: 73 DEV 75
D +
Sbjct: 72 DSL 74
>gi|380495060|emb|CCF32683.1| small nuclear ribonucleoprotein Sm D1 [Colletotrichum
higginsianum]
Length = 124
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K G + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIVHGTITSVSPQMNTALRTVKMTPK-GQDAVSLDTMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|310793785|gb|EFQ29246.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 124
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K G + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIVHGTITSVSPQMNTALRTVKMTPK-GQDAVSLDTMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|154297620|ref|XP_001549236.1| hypothetical protein BC1G_12655 [Botryotinia fuckeliana B05.10]
gi|347842491|emb|CCD57063.1| hypothetical protein [Botryotinia fuckeliana]
Length = 137
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K+G + +RG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIIHGTITSVSPQMNTALRTVKMTPKNGTSL-TLDVINLRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|390599258|gb|EIN08655.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 144
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIR 62
P L + +ELKNG +G + D MN HL+ V + ++ + + IR
Sbjct: 27 PDRFLMKLNNESVTIELKNGSVVHGTITGVDMQMNTHLKTVKMSMRNREPV-SLDTLSIR 85
Query: 63 GNTIKYLRVPDEV 75
GN I+Y +PD +
Sbjct: 86 GNNIRYFVLPDAL 98
>gi|299742717|ref|XP_001832694.2| small nuclear riboprotein Sm-D [Coprinopsis cinerea okayama7#130]
gi|298405314|gb|EAU89114.2| small nuclear riboprotein Sm-D [Coprinopsis cinerea okayama7#130]
Length = 136
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 5 SLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGN 64
+ L + +ELKNG +G + D MN L+ V T ++ + + IRGN
Sbjct: 21 AFLMKLNNETVTIELKNGAVVHGTITGVDMQMNTFLKTVKMTMRNREP-TSLDTLSIRGN 79
Query: 65 TIKYLRVPDEV 75
I+Y +PD +
Sbjct: 80 NIRYFILPDAL 90
>gi|255932631|ref|XP_002557872.1| Pc12g10510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582491|emb|CAP80678.1| Pc12g10510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 123
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + VELKNG +G +V+ MN LR V T K D + +RG+T
Sbjct: 7 LMKCAN-ETVTVELKNGTILHGTIVSVSPQMNTSLRAVKMTPKGRDPV-SLDTINVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|156030963|ref|XP_001584807.1| hypothetical protein SS1G_14262 [Sclerotinia sclerotiorum 1980]
gi|154700653|gb|EDO00392.1| hypothetical protein SS1G_14262 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 136
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K+G + +RG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIIHGTITSVSPQMNTALRTVKMTPKNGASL-SLDTINLRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|148674280|gb|EDL06227.1| mCG21971 [Mus musculus]
Length = 134
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T K+ + ++ I+G I+Y +PD +
Sbjct: 32 IELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPV-QLETLSIQGTNIRYFILPDSL 89
>gi|341038646|gb|EGS23638.1| putative small nuclear ribonucleoprotein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 118
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + M+ LR V T K G+ + + +RGNT
Sbjct: 7 LMKCAN-ETVTIELKNGAIVHGTIASVTPKMDTALRNVRYTPK-GEEPYSVESLTVRGNT 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|331241854|ref|XP_003333574.1| small nuclear ribonucleoprotein D1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309312564|gb|EFP89155.1| small nuclear ribonucleoprotein D1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 122
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + D MN HL+ V T ++ + ++ IRG+ ++Y+ +PD +
Sbjct: 17 IELKNGTVVHGTISGVDVAMNTHLKAVKMTVRNREPV-QLDSLSIRGSNVRYIILPDSL 74
>gi|121710142|ref|XP_001272687.1| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
clavatus NRRL 1]
gi|119400837|gb|EAW11261.1| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
clavatus NRRL 1]
Length = 123
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G +++ MN LR V T K D + +RG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTILHGTIISVSPQMNTALRTVKMTPKGRDPI-SLDTINVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|224003195|ref|XP_002291269.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973045|gb|EED91376.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 120
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G +V D MN HL++ T+K G +RG+T++ +PD +
Sbjct: 17 IELKNGTVISGTVVGVDATMNAHLKKAKLTAK-GKNPVSYATLSVRGSTVRSWILPDGLN 75
Query: 76 IDKVQEETKSRSDRKPPGVG 95
+D + E ++ +K VG
Sbjct: 76 LDALLVEDAPKNVQKSAPVG 95
>gi|302923356|ref|XP_003053658.1| hypothetical protein NECHADRAFT_75034 [Nectria haematococca mpVI
77-13-4]
gi|256734599|gb|EEU47945.1| hypothetical protein NECHADRAFT_75034 [Nectria haematococca mpVI
77-13-4]
Length = 114
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + + MN LR V T K D + IRG+TI+Y +PD +
Sbjct: 10 IELKNGTIVHGTISSVSPQMNTALRNVKMTIKGQDPV-SLDTMNIRGSTIRYFILPDSL 67
>gi|384484598|gb|EIE76778.1| small nuclear ribonucleoprotein Sm D1 [Rhizopus delemar RA
99-880]
Length = 115
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
VE+KNG +G + D MN HL+ V T K+ D + IRGN I+ + +PD +
Sbjct: 17 VEMKNGTVVHGTITGVDMSMNTHLKTVKMTIKNRDPV-SLDSLSIRGNNIRCVILPDSL 74
>gi|46105460|ref|XP_380534.1| hypothetical protein FG00358.1 [Gibberella zeae PH-1]
gi|408400659|gb|EKJ79736.1| hypothetical protein FPSE_00016 [Fusarium pseudograminearum
CS3096]
Length = 126
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K G + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIIHGTISSVSPQMNTALRNVKMTIK-GQEPISLETMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|295673314|ref|XP_002797203.1| small nuclear ribonucleoprotein Sm D1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|225681042|gb|EEH19326.1| small nuclear ribonucleoprotein Sm D1 [Paracoccidioides
brasiliensis Pb03]
gi|226282575|gb|EEH38141.1| small nuclear ribonucleoprotein Sm D1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226292265|gb|EEH47685.1| small nuclear ribonucleoprotein Sm D1 [Paracoccidioides
brasiliensis Pb18]
Length = 121
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T+K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTILHGTITSVSPQMNTALRTVKMTTKGRDPI-SLDTINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|154281585|ref|XP_001541605.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411784|gb|EDN07172.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225563163|gb|EEH11442.1| small nuclear ribonucleoprotein Sm D1 [Ajellomyces capsulatus
G186AR]
Length = 123
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T+K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTILHGTIASVSPQMNTALRTVKMTAKGRDPI-SLDTINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|239789452|dbj|BAH71351.1| ACYPI007411 [Acyrthosiphon pisum]
Length = 155
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY----IRGNTIKYLRVP 72
+ELKNG + +G + D MN HL+ V T ++ + P Y IRGN I+Y +P
Sbjct: 17 LELKNGTSVHGTITGVDVAMNTHLKAVKMTVRN-----QQPIHYETLSIRGNNIRYYILP 71
Query: 73 DEV 75
D +
Sbjct: 72 DSL 74
>gi|342874370|gb|EGU76384.1| hypothetical protein FOXB_13062 [Fusarium oxysporum Fo5176]
Length = 123
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K G + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIVHGTISSVSPQMNTALRTVKMTIK-GQEPISLETMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|212528972|ref|XP_002144643.1| small nuclear ribonucleoprotein SmD1, putative [Talaromyces
marneffei ATCC 18224]
gi|210074041|gb|EEA28128.1| small nuclear ribonucleoprotein SmD1, putative [Talaromyces
marneffei ATCC 18224]
Length = 126
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75
+ELKNG +G + + MN LR V T K G + IRG+TI+Y +PD +
Sbjct: 17 IELKNGTILSGTIASVSPQMNTALRTVKMTPK-GREPISLDTINIRGSTIRYYILPDSL 74
>gi|242764900|ref|XP_002340864.1| small nuclear ribonucleoprotein SmD1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724060|gb|EED23477.1| small nuclear ribonucleoprotein SmD1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 124
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L + +ELKNG +G + + MN LR V T K G + IRG+T
Sbjct: 6 FLMKCMNETVTIELKNGTILSGTIASVSPQMNTALRTVKMTPK-GREPISLDTINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|319411531|emb|CBQ73575.1| probable small nuclear ribonucleoprotein SNRPD1 [Sporisorium
reilianum SRZ2]
Length = 125
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V + + G + IRGN I+Y +PD +
Sbjct: 17 IELKNGTVVHGTVTGVDIQMNTHLKTVKMSVR-GRPAVTLDTLSIRGNNIRYWILPDALP 75
Query: 76 --IDKVQEETKSRSDRKPP 92
+ V + K + RK P
Sbjct: 76 LDMLLVDDAPKPKGKRKDP 94
>gi|378731678|gb|EHY58137.1| small nuclear ribonucleoprotein D1 [Exophiala dermatitidis
NIH/UT8656]
Length = 130
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD------RFWRMPEC 59
L+K A + +ELKNG +G + + MN LR V T+K+ +
Sbjct: 6 LMKCA-NETVTIELKNGTIVHGTITSVSPQMNTALRAVKMTTKNRSSPSAPGETISLDTI 64
Query: 60 YIRGNTIKYLRVPDEV-IDKVQEETKSRSDRKPPGVGRGRGRGREDGAS 107
IRG+TI+Y +PD + +D + D +P + R G DGA+
Sbjct: 65 NIRGSTIRYFILPDSLPLDTLL------IDDQPKPKNKARKEG--DGAA 105
>gi|171684873|ref|XP_001907378.1| hypothetical protein [Podospora anserina S mat+]
gi|170942397|emb|CAP68049.1| unnamed protein product [Podospora anserina S mat+]
Length = 125
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L Q + +ELK G +G + + MN LR V T + G ++ +RG+T
Sbjct: 6 FLMKCQNESVTIELKGGTIISGTIASVSPQMNTALRNVKMTPR-GQETIQLETLNVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|429859869|gb|ELA34627.1| small nuclear ribonucleoprotein sm d1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 177
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K D + IRG+T
Sbjct: 62 LMKCAN-ETVTIELKNGTIVHGTITSVSPQMNTALRTVKMTPKGQDAV-SLDTMNIRGST 119
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 120 IRYFILPDSL 129
>gi|315050300|ref|XP_003174524.1| small nuclear ribonucleoprotein Sm D1 [Arthroderma gypseum CBS
118893]
gi|327303162|ref|XP_003236273.1| small nuclear ribonucleoprotein Sm D1 [Trichophyton rubrum CBS
118892]
gi|311339839|gb|EFQ99041.1| small nuclear ribonucleoprotein Sm D1 [Arthroderma gypseum CBS
118893]
gi|326461615|gb|EGD87068.1| small nuclear ribonucleoprotein Sm D1 [Trichophyton rubrum CBS
118892]
gi|326471350|gb|EGD95359.1| small nuclear ribonucleoprotein Sm D1 [Trichophyton tonsurans CBS
112818]
Length = 125
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTILHGTIASVSPQMNTALRTVKMTPKGRDPI-SLDSINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|296813285|ref|XP_002846980.1| small nuclear ribonucleoprotein Sm D1 [Arthroderma otae CBS
113480]
gi|238842236|gb|EEQ31898.1| small nuclear ribonucleoprotein Sm D1 [Arthroderma otae CBS
113480]
Length = 125
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTILHGTIASVSPQMNTALRTVKMTPKGRDPI-SLDSINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|169770091|ref|XP_001819515.1| small nuclear ribonucleoprotein Sm D1 [Aspergillus oryzae RIB40]
gi|238487546|ref|XP_002375011.1| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
flavus NRRL3357]
gi|83767374|dbj|BAE57513.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699890|gb|EED56229.1| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
flavus NRRL3357]
gi|391864024|gb|EIT73322.1| small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 123
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTILHGTITSVSPQMNTSLRTVKMTPKGRDPI-SLDTINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|145243932|ref|XP_001394478.1| small nuclear ribonucleoprotein Sm D1 [Aspergillus niger CBS
513.88]
gi|134079163|emb|CAK40691.1| unnamed protein product [Aspergillus niger]
gi|350631277|gb|EHA19648.1| hypothetical protein ASPNIDRAFT_47972 [Aspergillus niger ATCC
1015]
gi|358367165|dbj|GAA83784.1| small nuclear ribonucleoprotein Sm D1 [Aspergillus kawachii IFO
4308]
Length = 121
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTILHGTITSVSPQMNTSLRTVKMTPKGRDPI-SLDTINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|67523297|ref|XP_659709.1| hypothetical protein AN2105.2 [Aspergillus nidulans FGSC A4]
gi|40745781|gb|EAA64937.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259487477|tpe|CBF86187.1| TPA: small nuclear ribonucleoprotein SmD1, putative
(AFU_orthologue; AFUA_2G05110) [Aspergillus nidulans
FGSC A4]
Length = 121
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTILHGTITSVSPQMNTSLRTVKMTPKGRDPI-SLDTINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|261195138|ref|XP_002623973.1| small nuclear ribonucleoprotein Sm D1 [Ajellomyces dermatitidis
SLH14081]
gi|239587845|gb|EEQ70488.1| small nuclear ribonucleoprotein Sm D1 [Ajellomyces dermatitidis
SLH14081]
gi|239610667|gb|EEQ87654.1| small nuclear ribonucleoprotein Sm D1 [Ajellomyces dermatitidis
ER-3]
Length = 123
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T K D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTILHGTITSVSPQMNTALRTVKMTPKGRDPI-SLDTINIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYYILPDSL 74
>gi|116192449|ref|XP_001222037.1| hypothetical protein CHGG_05942 [Chaetomium globosum CBS 148.51]
gi|88181855|gb|EAQ89323.1| hypothetical protein CHGG_05942 [Chaetomium globosum CBS 148.51]
Length = 125
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T + G + +RG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIVHGTIASVSPQMNTALRNVKMTPR-GQEPIHLETLNVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|297814015|ref|XP_002874891.1| hypothetical protein ARALYDRAFT_490274 [Arabidopsis lyrata subsp.
lyrata]
gi|297320728|gb|EFH51150.1| hypothetical protein ARALYDRAFT_490274 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 17 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV- 75
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +
Sbjct: 17 IELKNGTIVHGTITGVDVSMNTHLKAVKLTLK-GKNPVTLDHLSVRGNNIRYYILPDSLN 75
Query: 76 IDKVQEETKSRSDRK-------PPGVGR 96
++ + E R K PPG GR
Sbjct: 76 LETLLVEDTPRIKPKKPTAGNIPPGRGR 103
>gi|322693984|gb|EFY85827.1| small nuclear ribonucleoprotein Sm D1 [Metarhizium acridum CQMa
102]
gi|322708999|gb|EFZ00576.1| small nuclear ribonucleoprotein Sm D1 [Metarhizium anisopliae
ARSEF 23]
Length = 121
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T + D + IRG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIVHGTISSVSPQMNTALRTVKMTPRGQDPI-SLDTMNIRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|345564647|gb|EGX47607.1| hypothetical protein AOL_s00083g115 [Arthrobotrys oligospora ATCC
24927]
Length = 132
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY----I 61
L+K A + VELKNG +G + MN LR V T ++ R P+ I
Sbjct: 7 LMKCAN-ETVTVELKNGTIIHGTITTVTPTMNTSLRTVRMTVRN-----REPQTLDTINI 60
Query: 62 RGNTIKYLRVPDEV 75
RG+TI+Y +PD +
Sbjct: 61 RGSTIRYFILPDSL 74
>gi|367020776|ref|XP_003659673.1| hypothetical protein MYCTH_2296998 [Myceliophthora thermophila
ATCC 42464]
gi|347006940|gb|AEO54428.1| hypothetical protein MYCTH_2296998 [Myceliophthora thermophila
ATCC 42464]
Length = 118
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 6 LLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNT 65
L+K A + +ELKNG +G + + MN LR V T + D + +RG+T
Sbjct: 7 LMKCAN-ETVTIELKNGTIVHGTIASVSPQMNTALRNVKMTPRGQDPIP-LETLNVRGST 64
Query: 66 IKYLRVPDEV 75
I+Y +PD +
Sbjct: 65 IRYFILPDSL 74
>gi|334186331|ref|NP_001190664.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
gi|332656837|gb|AEE82237.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
Length = 126
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 17 VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTI 66
+ELKNG +G + + D MN HL+ V T K G + +RGN I
Sbjct: 17 IELKNGTIVHGTITDEYTRFYLNRGVDVSMNTHLKAVKLTLK-GKNPVTLDHLSVRGNNI 75
Query: 67 KYLRVPDEV-IDKVQEETKSRSDRKPPGVGR 96
+Y +PD + ++ + E R K P G+
Sbjct: 76 RYYILPDSLNLETLLVEDTPRIKPKKPTAGK 106
>gi|158263375|gb|ABW24416.1| small nuclear ribonucleoprotein [Riftia pachyptila]
Length = 104
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 27 GHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD 73
G L+ + MN + ++ CT +DG R ++ ++RG+ I++L +PD
Sbjct: 2 GKLLEAEDNMNCQMSDITCTYRDG-RTAQLENVFVRGSKIRFLILPD 47
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.142 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,180,624,613
Number of Sequences: 23463169
Number of extensions: 171672377
Number of successful extensions: 2700879
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13671
Number of HSP's successfully gapped in prelim test: 15452
Number of HSP's that attempted gapping in prelim test: 1573439
Number of HSP's gapped (non-prelim): 665752
length of query: 150
length of database: 8,064,228,071
effective HSP length: 113
effective length of query: 37
effective length of database: 9,707,857,270
effective search space: 359190718990
effective search space used: 359190718990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)