Query 031924
Match_columns 150
No_of_seqs 254 out of 1227
Neff 11.7
Searched_HMMs 29240
Date Mon Mar 25 11:22:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031924.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031924hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 3.3E-32 1.1E-36 179.6 17.7 145 1-148 170-315 (321)
2 2ynn_A Coatomer subunit beta'; 100.0 2.3E-31 7.7E-36 174.3 18.5 145 1-148 19-166 (304)
3 3ow8_A WD repeat-containing pr 100.0 2.3E-30 7.7E-35 170.8 18.1 145 1-148 128-273 (321)
4 1vyh_C Platelet-activating fac 100.0 1.2E-30 3.9E-35 177.2 16.4 145 1-148 114-259 (410)
5 1got_B GT-beta; complex (GTP-b 100.0 3.8E-30 1.3E-34 170.8 17.8 146 1-148 190-337 (340)
6 4ery_A WD repeat-containing pr 100.0 8.1E-30 2.8E-34 167.1 18.5 145 1-148 29-174 (312)
7 3frx_A Guanine nucleotide-bind 100.0 7.9E-30 2.7E-34 168.0 18.2 144 1-148 71-221 (319)
8 4gqb_B Methylosome protein 50; 100.0 6.4E-30 2.2E-34 170.1 17.2 145 1-148 133-283 (344)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.1E-30 3.1E-34 169.3 17.2 146 1-148 22-175 (345)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.9E-29 6.6E-34 167.7 17.9 146 1-148 67-219 (345)
11 2ynn_A Coatomer subunit beta'; 100.0 2.8E-29 9.6E-34 164.3 17.7 146 1-148 61-211 (304)
12 2hes_X YDR267CP; beta-propelle 100.0 3.6E-29 1.2E-33 165.5 18.0 146 1-148 64-224 (330)
13 1vyh_C Platelet-activating fac 100.0 2E-29 7E-34 171.0 16.7 145 1-148 240-405 (410)
14 4h5i_A Guanine nucleotide-exch 100.0 2.9E-29 9.9E-34 168.1 16.9 146 1-149 139-338 (365)
15 4ery_A WD repeat-containing pr 100.0 9.5E-29 3.2E-33 162.0 18.5 146 1-148 71-217 (312)
16 1got_B GT-beta; complex (GTP-b 100.0 1.5E-28 5E-33 163.1 18.6 146 1-148 61-209 (340)
17 2pbi_B Guanine nucleotide-bind 100.0 1.2E-28 4E-33 164.5 17.9 145 2-148 203-351 (354)
18 4g56_B MGC81050 protein; prote 100.0 7.6E-29 2.6E-33 165.6 16.8 145 1-148 145-337 (357)
19 1erj_A Transcriptional repress 100.0 1.9E-28 6.5E-33 165.4 18.4 144 1-148 129-281 (393)
20 2xzm_R RACK1; ribosome, transl 100.0 3.2E-28 1.1E-32 161.6 18.6 145 1-148 82-238 (343)
21 2ymu_A WD-40 repeat protein; u 100.0 1.5E-28 5E-33 172.3 17.0 142 1-148 432-574 (577)
22 2pbi_B Guanine nucleotide-bind 100.0 5.8E-28 2E-32 161.2 18.9 146 1-148 160-309 (354)
23 3iz6_a 40S ribosomal protein R 100.0 2E-28 7E-33 164.6 16.0 144 2-148 212-369 (380)
24 4gqb_B Methylosome protein 50; 100.0 4.6E-28 1.6E-32 161.2 16.9 145 1-148 88-240 (344)
25 1nr0_A Actin interacting prote 100.0 6.1E-28 2.1E-32 170.9 18.1 145 1-148 153-349 (611)
26 2hes_X YDR267CP; beta-propelle 100.0 1.6E-27 5.5E-32 157.6 18.1 143 2-148 21-178 (330)
27 3iz6_a 40S ribosomal protein R 100.0 1.8E-27 6.2E-32 160.0 17.9 146 2-148 164-323 (380)
28 2pm7_B Protein transport prote 100.0 2.4E-27 8.1E-32 154.8 17.6 146 1-148 15-183 (297)
29 3dm0_A Maltose-binding peripla 100.0 1.9E-27 6.4E-32 170.4 17.9 146 1-148 436-586 (694)
30 2pm7_B Protein transport prote 100.0 4.4E-27 1.5E-31 153.5 18.2 146 1-148 59-232 (297)
31 1erj_A Transcriptional repress 100.0 2.5E-27 8.5E-32 160.0 17.4 146 1-148 212-383 (393)
32 3dwl_C Actin-related protein 2 100.0 1.5E-28 5E-33 164.5 11.1 146 1-148 17-171 (377)
33 2w18_A PALB2, fancn, partner a 100.0 3.2E-27 1.1E-31 155.1 17.0 144 2-148 185-351 (356)
34 2aq5_A Coronin-1A; WD40 repeat 100.0 4.9E-27 1.7E-31 158.7 16.9 146 1-148 87-248 (402)
35 1nr0_A Actin interacting prote 100.0 3.9E-27 1.3E-31 166.8 16.8 144 1-148 454-605 (611)
36 2ymu_A WD-40 repeat protein; u 100.0 5.1E-27 1.8E-31 164.5 17.0 142 1-148 391-533 (577)
37 3vl1_A 26S proteasome regulato 100.0 4.4E-27 1.5E-31 159.3 15.5 145 2-148 104-272 (420)
38 3bg1_A Protein SEC13 homolog; 100.0 3.5E-27 1.2E-31 155.2 14.6 146 1-148 19-192 (316)
39 3dwl_C Actin-related protein 2 100.0 1E-27 3.5E-32 160.5 11.9 143 1-146 106-274 (377)
40 3frx_A Guanine nucleotide-bind 100.0 1.4E-26 4.8E-31 152.5 17.0 144 1-148 23-179 (319)
41 3f3f_A Nucleoporin SEH1; struc 100.0 1.7E-26 5.7E-31 152.1 17.4 146 1-148 63-331 (351)
42 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-26 8E-31 151.4 18.1 146 1-148 17-243 (351)
43 2xzm_R RACK1; ribosome, transl 100.0 2.7E-26 9.1E-31 152.4 18.0 142 4-148 35-197 (343)
44 3vl1_A 26S proteasome regulato 100.0 7.2E-27 2.4E-31 158.2 15.5 146 1-148 145-316 (420)
45 3mkq_A Coatomer beta'-subunit; 99.9 2E-26 6.9E-31 166.9 17.6 145 1-148 19-166 (814)
46 3sfz_A APAF-1, apoptotic pepti 99.9 2.6E-26 9E-31 172.5 18.4 145 1-148 621-768 (1249)
47 3mmy_A MRNA export factor; mRN 99.9 4.3E-26 1.5E-30 151.5 16.7 144 1-147 92-339 (368)
48 4e54_B DNA damage-binding prot 99.9 2.1E-26 7.3E-31 157.2 15.5 144 1-148 125-276 (435)
49 2j04_B YDR362CP, TAU91; beta p 99.9 5.9E-27 2E-31 163.2 12.6 144 1-148 272-422 (524)
50 1k8k_C P40, ARP2/3 complex 41 99.9 9.1E-26 3.1E-30 150.4 17.8 146 1-148 14-167 (372)
51 2pm9_A Protein WEB1, protein t 99.9 4.4E-26 1.5E-30 154.0 16.3 146 1-148 171-331 (416)
52 3bg1_A Protein SEC13 homolog; 99.9 1E-26 3.5E-31 152.9 12.9 146 1-148 63-241 (316)
53 4ggc_A P55CDC, cell division c 99.9 1.5E-25 5.1E-30 146.6 18.2 144 1-148 31-309 (318)
54 4e54_B DNA damage-binding prot 99.9 1.6E-26 5.5E-31 157.8 14.1 144 1-148 170-321 (435)
55 2oaj_A Protein SNI1; WD40 repe 99.9 3.2E-26 1.1E-30 167.9 16.1 145 1-148 441-655 (902)
56 4aow_A Guanine nucleotide-bind 99.9 2.1E-25 7.3E-30 147.1 18.4 146 1-148 44-240 (340)
57 3lrv_A PRE-mRNA-splicing facto 99.9 3.8E-26 1.3E-30 151.6 14.9 144 1-147 131-285 (343)
58 1gxr_A ESG1, transducin-like e 99.9 1E-25 3.4E-30 148.3 16.8 145 1-148 57-208 (337)
59 1gxr_A ESG1, transducin-like e 99.9 2.3E-25 7.7E-30 146.6 18.2 144 1-148 103-249 (337)
60 3ei3_B DNA damage-binding prot 99.9 1.3E-25 4.4E-30 150.7 17.0 144 1-148 79-230 (383)
61 1sq9_A Antiviral protein SKI8; 99.9 1.5E-25 5.3E-30 150.6 17.1 145 1-148 192-389 (397)
62 1r5m_A SIR4-interacting protei 99.9 8.5E-26 2.9E-30 152.6 15.9 145 1-148 253-419 (425)
63 3jrp_A Fusion protein of prote 99.9 1.1E-25 3.9E-30 150.1 16.1 146 1-148 17-185 (379)
64 1k8k_C P40, ARP2/3 complex 41 99.9 2.1E-25 7.1E-30 148.7 16.7 144 1-147 102-267 (372)
65 3ei3_B DNA damage-binding prot 99.9 3.5E-25 1.2E-29 148.6 17.5 142 1-148 124-276 (383)
66 4g56_B MGC81050 protein; prote 99.9 1.4E-25 4.8E-30 149.8 15.4 145 1-148 48-207 (357)
67 3jrp_A Fusion protein of prote 99.9 4.3E-25 1.5E-29 147.3 17.7 146 1-148 61-234 (379)
68 4aez_A CDC20, WD repeat-contai 99.9 3.6E-25 1.2E-29 149.6 17.5 144 1-148 140-287 (401)
69 2j04_B YDR362CP, TAU91; beta p 99.9 7.1E-26 2.4E-30 157.8 13.6 146 1-148 213-380 (524)
70 3zwl_B Eukaryotic translation 99.9 8.6E-25 2.9E-29 145.3 18.1 144 1-148 181-340 (369)
71 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.2E-25 1.4E-29 151.3 16.9 145 1-148 108-265 (450)
72 2xyi_A Probable histone-bindin 99.9 5.6E-25 1.9E-29 150.0 17.4 146 1-148 237-404 (430)
73 3dw8_B Serine/threonine-protei 99.9 3.4E-25 1.2E-29 150.9 16.0 145 1-148 34-252 (447)
74 3i2n_A WD repeat-containing pr 99.9 5.7E-25 1.9E-29 145.8 16.6 143 2-148 175-347 (357)
75 2aq5_A Coronin-1A; WD40 repeat 99.9 2.6E-25 8.9E-30 150.3 15.1 145 2-148 41-201 (402)
76 3k26_A Polycomb protein EED; W 99.9 5.7E-25 2E-29 146.1 16.5 145 1-148 24-186 (366)
77 3v7d_B Cell division control p 99.9 1.2E-24 4E-29 149.3 18.4 144 1-148 168-335 (464)
78 4aow_A Guanine nucleotide-bind 99.9 1.1E-24 3.7E-29 143.7 17.5 142 2-148 178-331 (340)
79 3k26_A Polycomb protein EED; W 99.9 1.6E-25 5.4E-30 148.8 13.5 143 1-148 75-254 (366)
80 3dw8_B Serine/threonine-protei 99.9 3.3E-25 1.1E-29 151.0 14.9 145 1-148 99-309 (447)
81 4gq1_A NUP37; propeller, trans 99.9 2.6E-25 9.1E-30 150.2 14.2 139 6-146 155-382 (393)
82 3mkq_A Coatomer beta'-subunit; 99.9 5.5E-25 1.9E-29 159.4 16.4 147 1-148 61-211 (814)
83 3dm0_A Maltose-binding peripla 99.9 1.7E-24 5.7E-29 155.2 18.1 145 1-148 388-544 (694)
84 3lrv_A PRE-mRNA-splicing facto 99.9 1.8E-24 6.3E-29 143.5 16.9 140 2-147 83-237 (343)
85 3zwl_B Eukaryotic translation 99.9 3E-24 1E-28 142.7 17.6 145 1-148 80-243 (369)
86 3gre_A Serine/threonine-protei 99.9 6.9E-25 2.4E-29 149.4 14.8 142 3-148 178-353 (437)
87 2xyi_A Probable histone-bindin 99.9 3.5E-24 1.2E-28 146.1 17.5 146 1-148 187-347 (430)
88 2pm9_A Protein WEB1, protein t 99.9 1.4E-24 4.6E-29 146.7 15.2 143 1-145 73-237 (416)
89 3gre_A Serine/threonine-protei 99.9 8.1E-25 2.8E-29 149.1 13.8 147 1-148 69-239 (437)
90 4a11_B DNA excision repair pro 99.9 7.1E-24 2.4E-28 142.6 18.1 141 6-148 155-359 (408)
91 1r5m_A SIR4-interacting protei 99.9 4.4E-24 1.5E-28 144.2 17.1 143 1-148 212-355 (425)
92 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.6E-24 1.2E-28 146.7 16.6 144 1-147 155-332 (450)
93 2j04_A TAU60, YPL007P, hypothe 99.9 1.8E-24 6.1E-29 150.1 14.8 136 1-147 91-247 (588)
94 3jro_A Fusion protein of prote 99.9 3.9E-24 1.3E-28 154.6 17.2 146 1-148 59-232 (753)
95 2oaj_A Protein SNI1; WD40 repe 99.9 2.4E-24 8.2E-29 158.1 16.2 142 1-148 64-236 (902)
96 3odt_A Protein DOA1; ubiquitin 99.9 9.7E-24 3.3E-28 137.6 17.4 142 1-148 24-168 (313)
97 3mmy_A MRNA export factor; mRN 99.9 4.5E-24 1.6E-28 141.7 16.0 110 1-113 45-162 (368)
98 4aez_A CDC20, WD repeat-contai 99.9 7.8E-24 2.7E-28 143.1 17.3 142 3-148 99-242 (401)
99 1pgu_A Actin interacting prote 99.9 3.7E-24 1.3E-28 150.6 16.3 139 7-148 456-608 (615)
100 3odt_A Protein DOA1; ubiquitin 99.9 1.2E-23 4E-28 137.2 17.2 139 2-148 149-290 (313)
101 3i2n_A WD repeat-containing pr 99.9 2.3E-24 8E-29 142.8 13.9 143 2-148 124-285 (357)
102 1pgu_A Actin interacting prote 99.9 1.5E-23 5.3E-28 147.5 18.6 147 1-148 24-232 (615)
103 3jro_A Fusion protein of prote 99.9 2.7E-24 9.4E-29 155.4 15.1 146 1-148 15-183 (753)
104 1sq9_A Antiviral protein SKI8; 99.9 4.6E-24 1.6E-28 143.4 14.9 145 1-148 68-261 (397)
105 4gga_A P55CDC, cell division c 99.9 2.3E-23 7.8E-28 141.6 17.6 142 1-148 111-255 (420)
106 4gga_A P55CDC, cell division c 99.9 1.5E-23 5E-28 142.6 16.3 143 2-148 237-389 (420)
107 3vu4_A KMHSV2; beta-propeller 99.9 2.5E-23 8.7E-28 138.8 16.9 144 2-148 65-265 (355)
108 2j04_A TAU60, YPL007P, hypothe 99.9 1.8E-23 6.3E-28 145.1 16.0 140 1-146 135-290 (588)
109 1yfq_A Cell cycle arrest prote 99.9 3.5E-23 1.2E-27 136.6 16.8 140 1-146 156-315 (342)
110 4gq1_A NUP37; propeller, trans 99.9 1E-23 3.4E-28 142.4 14.1 143 3-148 97-280 (393)
111 3v7d_B Cell division control p 99.9 4.3E-23 1.5E-27 141.5 17.5 141 2-148 275-415 (464)
112 4a11_B DNA excision repair pro 99.9 2.6E-23 8.8E-28 139.9 15.8 144 1-148 49-212 (408)
113 1yfq_A Cell cycle arrest prote 99.9 1.9E-23 6.6E-28 137.9 14.8 141 1-148 17-173 (342)
114 3sfz_A APAF-1, apoptotic pepti 99.9 3.8E-23 1.3E-27 155.5 18.0 145 1-148 663-865 (1249)
115 3vu4_A KMHSV2; beta-propeller 99.9 6.3E-23 2.1E-27 136.9 16.1 140 8-148 148-330 (355)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.4E-22 4.6E-27 138.6 17.6 139 2-148 124-262 (445)
117 1p22_A F-BOX/WD-repeat protein 99.9 1.2E-22 4E-27 138.6 15.2 137 4-148 263-408 (435)
118 1p22_A F-BOX/WD-repeat protein 99.9 3.5E-22 1.2E-26 136.3 17.3 139 2-148 138-279 (435)
119 2oit_A Nucleoporin 214KDA; NH2 99.9 6.9E-23 2.4E-27 140.0 11.9 138 1-141 98-258 (434)
120 4h5i_A Guanine nucleotide-exch 99.9 1.9E-22 6.6E-27 135.1 13.2 109 1-111 225-343 (365)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3.5E-21 1.2E-25 131.6 18.2 135 6-148 168-302 (445)
122 2oit_A Nucleoporin 214KDA; NH2 99.9 2.9E-22 9.9E-27 137.0 11.1 145 1-148 42-217 (434)
123 3bws_A Protein LP49; two-domai 99.9 1.7E-20 5.8E-25 127.5 16.2 139 1-143 128-273 (433)
124 1l0q_A Surface layer protein; 99.9 8.5E-20 2.9E-24 122.6 17.9 141 1-147 37-182 (391)
125 1l0q_A Surface layer protein; 99.8 3.6E-19 1.2E-23 119.6 18.1 142 1-148 121-269 (391)
126 2w18_A PALB2, fancn, partner a 99.8 3.5E-19 1.2E-23 117.2 15.1 129 15-148 155-308 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.8 8.8E-19 3E-23 119.2 17.6 138 1-144 184-331 (415)
128 3bws_A Protein LP49; two-domai 99.8 4.4E-19 1.5E-23 120.6 15.9 142 1-147 175-327 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.8 8.4E-18 2.9E-22 114.4 15.8 138 1-145 228-375 (415)
130 2ecf_A Dipeptidyl peptidase IV 99.8 4.6E-18 1.6E-22 122.5 14.6 141 1-145 42-230 (741)
131 2ojh_A Uncharacterized protein 99.8 3.6E-18 1.2E-22 110.1 11.6 143 1-145 134-293 (297)
132 1xfd_A DIP, dipeptidyl aminope 99.8 1.8E-18 6.2E-23 124.3 10.4 140 1-144 22-193 (723)
133 2ojh_A Uncharacterized protein 99.8 5.6E-17 1.9E-21 104.5 14.8 140 1-144 90-237 (297)
134 1nir_A Nitrite reductase; hemo 99.8 9.6E-17 3.3E-21 112.5 16.5 142 2-147 144-304 (543)
135 4ggc_A P55CDC, cell division c 99.8 3.1E-17 1.1E-21 107.1 12.5 108 2-112 203-316 (318)
136 3vgz_A Uncharacterized protein 99.7 9.2E-16 3.1E-20 101.5 19.0 139 1-144 190-334 (353)
137 3vgz_A Uncharacterized protein 99.7 6E-16 2E-20 102.4 17.3 140 1-143 94-250 (353)
138 1ri6_A Putative isomerase YBHE 99.7 4.4E-16 1.5E-20 102.5 14.9 144 1-147 43-202 (343)
139 1k32_A Tricorn protease; prote 99.7 3.4E-16 1.2E-20 116.8 15.4 137 2-144 344-492 (1045)
140 3u4y_A Uncharacterized protein 99.7 1.5E-15 5.1E-20 99.9 16.6 135 3-142 5-146 (331)
141 1nir_A Nitrite reductase; hemo 99.7 5.9E-16 2E-20 108.6 15.3 143 1-147 184-348 (543)
142 3u4y_A Uncharacterized protein 99.7 1E-15 3.5E-20 100.7 15.2 137 1-142 89-239 (331)
143 1pby_B Quinohemoprotein amine 99.7 1.4E-15 4.9E-20 99.8 15.0 140 1-148 87-304 (337)
144 1xfd_A DIP, dipeptidyl aminope 99.7 1.5E-16 5.1E-21 114.4 10.8 137 1-142 66-273 (723)
145 3hfq_A Uncharacterized protein 99.7 1.2E-15 4.2E-20 101.1 14.2 140 1-141 45-204 (347)
146 1ri6_A Putative isomerase YBHE 99.7 7E-15 2.4E-19 96.8 17.2 145 1-147 134-301 (343)
147 1k32_A Tricorn protease; prote 99.7 7.3E-16 2.5E-20 115.0 13.7 137 1-144 301-441 (1045)
148 1z68_A Fibroblast activation p 99.7 2.5E-16 8.5E-21 113.3 10.9 137 1-144 21-189 (719)
149 2ecf_A Dipeptidyl peptidase IV 99.7 8.6E-16 2.9E-20 110.8 13.4 137 1-143 114-305 (741)
150 3o4h_A Acylamino-acid-releasin 99.7 5.2E-16 1.8E-20 109.4 11.7 133 1-144 155-302 (582)
151 3o4h_A Acylamino-acid-releasin 99.7 5.3E-16 1.8E-20 109.3 11.3 138 2-147 116-269 (582)
152 2z3z_A Dipeptidyl aminopeptida 99.7 3.7E-15 1.3E-19 107.0 14.5 141 1-143 186-375 (706)
153 3hfq_A Uncharacterized protein 99.7 2.6E-14 8.9E-19 94.7 17.5 142 1-144 146-306 (347)
154 3scy_A Hypothetical bacterial 99.7 2E-14 7E-19 95.7 17.1 139 1-142 160-324 (361)
155 2z3z_A Dipeptidyl aminopeptida 99.7 1.6E-15 5.5E-20 108.9 12.5 143 1-146 126-334 (706)
156 4a5s_A Dipeptidyl peptidase 4 99.7 3E-15 1E-19 108.3 13.4 138 1-144 22-191 (740)
157 1z68_A Fibroblast activation p 99.6 4.3E-16 1.5E-20 112.1 8.5 134 1-141 65-270 (719)
158 1jmx_B Amine dehydrogenase; ox 99.6 1.2E-14 4.1E-19 95.9 13.4 136 1-139 5-163 (349)
159 1pby_B Quinohemoprotein amine 99.6 3.8E-14 1.3E-18 93.0 14.5 132 8-142 2-153 (337)
160 1jmx_B Amine dehydrogenase; ox 99.6 1.2E-14 4E-19 96.0 11.6 138 1-148 97-319 (349)
161 1jof_A Carboxy-CIS,CIS-muconat 99.6 2.4E-14 8.2E-19 95.8 11.8 139 1-142 45-211 (365)
162 3azo_A Aminopeptidase; POP fam 99.6 3.7E-14 1.3E-18 101.2 12.7 141 1-143 135-313 (662)
163 1jof_A Carboxy-CIS,CIS-muconat 99.6 6.3E-13 2.2E-17 88.9 16.9 143 1-143 88-274 (365)
164 3pe7_A Oligogalacturonate lyas 99.6 1.4E-13 4.8E-18 92.3 13.4 138 2-143 42-208 (388)
165 4a5s_A Dipeptidyl peptidase 4 99.6 1.2E-13 4.2E-18 100.0 13.7 135 2-141 68-277 (740)
166 1q7f_A NHL, brain tumor CG1071 99.5 2.2E-12 7.4E-17 83.4 16.6 142 1-147 126-273 (286)
167 3fvz_A Peptidyl-glycine alpha- 99.5 2.1E-12 7.1E-17 85.3 16.8 145 1-147 29-220 (329)
168 3scy_A Hypothetical bacterial 99.5 8.4E-13 2.9E-17 87.9 14.6 129 1-132 216-360 (361)
169 3azo_A Aminopeptidase; POP fam 99.5 3.7E-13 1.3E-17 96.1 13.2 139 4-145 87-263 (662)
170 3pe7_A Oligogalacturonate lyas 99.5 2.2E-12 7.6E-17 86.4 15.3 137 2-142 87-256 (388)
171 1xip_A Nucleoporin NUP159; bet 99.5 5.4E-13 1.9E-17 89.8 12.1 132 1-147 43-184 (388)
172 3fvz_A Peptidyl-glycine alpha- 99.5 1.8E-12 6E-17 85.7 14.2 144 1-148 148-316 (329)
173 1xip_A Nucleoporin NUP159; bet 99.5 3E-12 1E-16 86.2 13.9 126 1-140 93-230 (388)
174 2xdw_A Prolyl endopeptidase; a 99.4 2.9E-12 1E-16 92.4 12.6 137 2-142 131-304 (710)
175 2dg1_A DRP35, lactonase; beta 99.4 2.6E-11 9E-16 79.8 16.1 135 1-139 50-197 (333)
176 3no2_A Uncharacterized protein 99.4 7.5E-12 2.6E-16 80.9 12.4 135 6-147 4-148 (276)
177 1q7f_A NHL, brain tumor CG1071 99.4 3.6E-11 1.2E-15 77.6 15.5 138 2-145 83-228 (286)
178 1rwi_B Serine/threonine-protei 99.4 2.6E-11 8.7E-16 77.6 14.0 145 1-148 113-258 (270)
179 3no2_A Uncharacterized protein 99.4 4E-11 1.4E-15 77.5 14.0 138 2-147 43-188 (276)
180 2gop_A Trilobed protease; beta 99.4 2E-11 6.8E-16 80.7 13.0 133 1-146 109-284 (347)
181 2xdw_A Prolyl endopeptidase; a 99.4 8.2E-11 2.8E-15 84.9 16.9 144 1-145 176-357 (710)
182 1qks_A Cytochrome CD1 nitrite 99.4 1.1E-10 3.9E-15 82.3 16.6 112 5-118 165-282 (567)
183 3e5z_A Putative gluconolactona 99.4 7.1E-11 2.4E-15 76.7 14.5 141 1-147 33-195 (296)
184 3c5m_A Oligogalacturonate lyas 99.4 5.2E-12 1.8E-16 84.7 9.3 139 2-143 87-257 (396)
185 3e5z_A Putative gluconolactona 99.3 7.8E-11 2.7E-15 76.5 14.3 137 1-145 120-278 (296)
186 3c5m_A Oligogalacturonate lyas 99.3 4.1E-12 1.4E-16 85.2 8.2 138 1-142 41-207 (396)
187 3dsm_A Uncharacterized protein 99.3 1.8E-10 6.2E-15 76.1 15.5 137 1-142 89-243 (328)
188 1rwi_B Serine/threonine-protei 99.3 2.5E-10 8.4E-15 73.0 15.4 143 1-147 72-215 (270)
189 2dg1_A DRP35, lactonase; beta 99.3 5.3E-11 1.8E-15 78.4 12.1 136 1-142 11-153 (333)
190 2oiz_A Aromatic amine dehydrog 99.3 4.3E-10 1.5E-14 75.3 15.6 127 4-136 208-360 (361)
191 2bkl_A Prolyl endopeptidase; m 99.3 2.8E-10 9.7E-15 82.0 15.5 141 1-145 173-340 (695)
192 2bkl_A Prolyl endopeptidase; m 99.3 3.5E-11 1.2E-15 86.7 10.8 135 2-141 127-288 (695)
193 3g4e_A Regucalcin; six bladed 99.3 3.2E-10 1.1E-14 73.8 14.2 139 1-142 103-260 (297)
194 3dsm_A Uncharacterized protein 99.3 8.2E-10 2.8E-14 72.9 15.5 133 7-144 54-192 (328)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 4.2E-10 1.4E-14 73.3 13.8 139 1-143 122-288 (314)
196 2oiz_A Aromatic amine dehydrog 99.2 4.1E-10 1.4E-14 75.4 13.4 111 5-119 13-149 (361)
197 2z2n_A Virginiamycin B lyase; 99.2 3.7E-09 1.3E-13 68.2 17.3 139 1-145 62-204 (299)
198 2gop_A Trilobed protease; beta 99.2 2.1E-10 7.1E-15 75.8 11.4 125 6-143 23-189 (347)
199 2z2n_A Virginiamycin B lyase; 99.2 5.7E-09 2E-13 67.3 17.4 138 1-144 104-245 (299)
200 1yr2_A Prolyl oligopeptidase; 99.2 2.8E-10 9.7E-15 82.6 10.8 137 2-143 169-335 (741)
201 1yr2_A Prolyl oligopeptidase; 99.2 6E-09 2.1E-13 75.7 17.0 141 1-145 214-384 (741)
202 3hrp_A Uncharacterized protein 99.2 4.2E-09 1.4E-13 71.7 15.2 143 1-147 136-291 (409)
203 2hz6_A Endoplasmic reticulum t 99.1 1.4E-11 4.6E-16 82.8 2.0 134 6-148 8-143 (369)
204 2qc5_A Streptogramin B lactona 99.1 3.1E-08 1.1E-12 63.9 17.8 138 1-144 25-166 (300)
205 3sjl_D Methylamine dehydrogena 99.1 5.3E-09 1.8E-13 70.4 14.2 137 3-143 40-207 (386)
206 2qc5_A Streptogramin B lactona 99.1 3E-08 1E-12 63.9 17.4 137 2-144 68-208 (300)
207 3hrp_A Uncharacterized protein 99.1 3.8E-08 1.3E-12 67.0 17.2 143 1-149 224-405 (409)
208 1qks_A Cytochrome CD1 nitrite 99.1 1.8E-08 6.1E-13 71.3 15.6 67 1-68 202-275 (567)
209 2ghs_A AGR_C_1268P; regucalcin 99.1 2.9E-08 1E-12 65.5 15.7 135 2-142 140-290 (326)
210 2qe8_A Uncharacterized protein 99.0 7.8E-08 2.7E-12 63.8 14.9 141 2-144 126-311 (343)
211 2mad_H Methylamine dehydrogena 99.0 1.5E-07 5.1E-12 63.4 16.3 109 1-115 71-199 (373)
212 3dr2_A Exported gluconolactona 99.0 5.9E-08 2E-12 63.3 14.0 134 2-142 51-206 (305)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 8.3E-08 2.8E-12 62.4 13.6 133 1-139 23-191 (314)
214 3sjl_D Methylamine dehydrogena 98.9 1.9E-08 6.6E-13 67.7 10.6 110 1-114 83-212 (386)
215 3c75_H MADH, methylamine dehyd 98.9 4.5E-08 1.5E-12 66.9 12.3 136 5-144 82-248 (426)
216 3dr2_A Exported gluconolactona 98.9 6.5E-08 2.2E-12 63.1 12.6 136 1-143 136-296 (305)
217 2mad_H Methylamine dehydrogena 98.9 3.9E-07 1.3E-11 61.3 16.6 111 4-119 29-165 (373)
218 2iwa_A Glutamine cyclotransfer 98.9 5.4E-07 1.9E-11 57.8 16.0 139 1-146 26-173 (266)
219 2qe8_A Uncharacterized protein 98.9 1.4E-07 4.7E-12 62.7 13.7 142 1-144 22-215 (343)
220 3iuj_A Prolyl endopeptidase; h 98.9 3.3E-08 1.1E-12 71.4 11.4 132 2-137 135-293 (693)
221 3iuj_A Prolyl endopeptidase; h 98.8 2.3E-07 7.8E-12 67.1 14.5 138 1-143 180-345 (693)
222 3g4e_A Regucalcin; six bladed 98.8 5E-07 1.7E-11 58.7 14.8 139 1-144 59-219 (297)
223 3c75_H MADH, methylamine dehyd 98.8 5E-08 1.7E-12 66.7 10.0 110 1-115 123-252 (426)
224 2iwa_A Glutamine cyclotransfer 98.8 6.9E-07 2.3E-11 57.3 14.3 139 6-147 74-230 (266)
225 1yiq_A Quinohemoprotein alcoho 98.8 2.4E-07 8.2E-12 67.0 13.5 128 9-138 321-532 (689)
226 2ghs_A AGR_C_1268P; regucalcin 98.8 1.4E-06 4.9E-11 57.4 16.0 133 1-141 95-247 (326)
227 2ece_A 462AA long hypothetical 98.8 6.9E-07 2.4E-11 61.2 14.4 139 2-142 194-399 (462)
228 3mbr_X Glutamine cyclotransfer 98.8 2.5E-06 8.7E-11 53.9 16.0 129 9-141 77-222 (243)
229 1kb0_A Quinohemoprotein alcoho 98.8 3.2E-07 1.1E-11 66.3 13.3 129 8-139 328-535 (677)
230 3nol_A Glutamine cyclotransfer 98.8 1.1E-06 3.8E-11 56.0 14.2 133 5-141 94-242 (262)
231 3nok_A Glutaminyl cyclase; bet 98.7 8.4E-07 2.9E-11 56.7 13.2 131 7-144 65-200 (268)
232 3nok_A Glutaminyl cyclase; bet 98.7 2.8E-06 9.6E-11 54.3 14.8 133 5-141 103-253 (268)
233 1fwx_A Nitrous oxide reductase 98.7 9E-08 3.1E-12 67.5 8.5 122 18-142 255-406 (595)
234 2ece_A 462AA long hypothetical 98.7 1.4E-06 4.8E-11 59.7 14.0 136 5-142 93-271 (462)
235 1mda_H Methylamine dehydrogena 98.7 7.6E-08 2.6E-12 64.6 7.8 66 1-66 70-156 (368)
236 3tc9_A Hypothetical hydrolase; 98.7 4.3E-06 1.5E-10 57.3 16.1 135 1-140 142-287 (430)
237 3nol_A Glutamine cyclotransfer 98.7 3E-06 1E-10 54.1 14.2 136 2-144 49-191 (262)
238 1npe_A Nidogen, entactin; glyc 98.6 2.3E-05 7.9E-10 50.0 16.7 133 1-136 127-263 (267)
239 3mbr_X Glutamine cyclotransfer 98.5 4E-05 1.4E-09 48.5 16.5 133 2-141 27-166 (243)
240 2hz6_A Endoplasmic reticulum t 98.5 8.3E-08 2.8E-12 64.4 4.0 122 6-137 91-217 (369)
241 1fwx_A Nitrous oxide reductase 98.5 7.3E-06 2.5E-10 58.0 13.4 139 5-147 145-354 (595)
242 2ad6_A Methanol dehydrogenase 98.5 1.1E-05 3.9E-10 57.2 14.0 128 9-139 318-522 (571)
243 1yiq_A Quinohemoprotein alcoho 98.4 1.9E-05 6.4E-10 57.3 14.7 71 2-73 241-342 (689)
244 2fp8_A Strictosidine synthase; 98.4 4.3E-05 1.5E-09 50.1 15.2 134 1-139 24-200 (322)
245 1npe_A Nidogen, entactin; glyc 98.4 9.2E-05 3.1E-09 47.2 18.6 141 1-145 41-189 (267)
246 3hxj_A Pyrrolo-quinoline quino 98.4 8.8E-06 3E-10 53.2 11.2 124 7-140 107-231 (330)
247 1kv9_A Type II quinohemoprotei 98.4 2E-05 6.9E-10 57.0 13.6 132 9-142 316-520 (668)
248 3q7m_A Lipoprotein YFGL, BAMB; 98.4 3E-05 1E-09 51.8 13.7 110 6-119 52-170 (376)
249 3hxj_A Pyrrolo-quinoline quino 98.4 8.7E-06 3E-10 53.2 10.7 132 5-147 186-317 (330)
250 1kb0_A Quinohemoprotein alcoho 98.4 2.8E-05 9.6E-10 56.3 14.1 143 2-148 249-501 (677)
251 1flg_A Protein (quinoprotein e 98.3 2.3E-05 7.9E-10 55.8 12.7 80 58-139 465-545 (582)
252 3q7m_A Lipoprotein YFGL, BAMB; 98.3 5.4E-05 1.8E-09 50.6 13.7 108 7-120 239-346 (376)
253 2xe4_A Oligopeptidase B; hydro 98.2 2.9E-05 9.8E-10 56.9 12.1 136 2-140 180-336 (751)
254 1mda_H Methylamine dehydrogena 98.2 6.3E-06 2.2E-10 55.4 7.8 90 18-111 47-158 (368)
255 3kya_A Putative phosphatase; s 98.2 0.00026 8.9E-09 49.4 15.8 136 1-137 144-323 (496)
256 1w6s_A Methanol dehydrogenase 98.2 0.00014 4.7E-09 52.0 14.3 79 58-139 452-532 (599)
257 4hw6_A Hypothetical protein, I 98.1 0.00024 8.3E-09 48.8 14.5 132 1-138 144-287 (433)
258 2fp8_A Strictosidine synthase; 98.1 0.0003 1E-08 46.1 13.3 140 2-146 132-305 (322)
259 2p9w_A MAL S 1 allergenic prot 98.0 0.00066 2.3E-08 44.9 13.9 145 2-147 19-208 (334)
260 2xe4_A Oligopeptidase B; hydro 98.0 0.00076 2.6E-08 49.5 15.5 111 1-111 226-354 (751)
261 1kv9_A Type II quinohemoprotei 98.0 0.00035 1.2E-08 50.6 13.1 71 2-73 236-337 (668)
262 3qqz_A Putative uncharacterize 97.9 0.0013 4.5E-08 42.0 14.7 139 1-140 75-240 (255)
263 3v64_C Agrin; beta propeller, 97.8 0.0024 8.1E-08 42.6 17.2 134 1-138 78-217 (349)
264 3v65_B Low-density lipoprotein 97.8 0.0027 9.2E-08 42.9 15.9 134 1-138 121-260 (386)
265 1k3i_A Galactose oxidase precu 97.7 0.00097 3.3E-08 48.1 11.7 111 2-113 192-325 (656)
266 1k3i_A Galactose oxidase precu 97.7 0.00078 2.7E-08 48.6 11.2 124 17-143 369-530 (656)
267 3tc9_A Hypothetical hydrolase; 97.7 0.0049 1.7E-07 42.3 15.5 146 1-148 231-424 (430)
268 2ism_A Putative oxidoreductase 97.6 0.0029 9.9E-08 42.2 12.2 64 1-67 36-113 (352)
269 2p4o_A Hypothetical protein; p 97.6 0.0055 1.9E-07 39.9 16.2 108 1-112 37-148 (306)
270 1ijq_A LDL receptor, low-densi 97.6 0.0059 2E-07 40.0 17.5 133 1-138 35-178 (316)
271 2p4o_A Hypothetical protein; p 97.6 0.0062 2.1E-07 39.6 16.3 128 7-140 128-274 (306)
272 4hw6_A Hypothetical protein, I 97.5 0.0091 3.1E-07 41.0 16.4 145 1-148 233-427 (433)
273 2ad6_A Methanol dehydrogenase 97.5 0.0088 3E-07 42.6 14.2 55 18-73 273-339 (571)
274 3amr_A 3-phytase; beta-propell 97.5 0.0097 3.3E-07 39.8 16.8 131 6-141 39-197 (355)
275 3v65_B Low-density lipoprotein 97.5 0.01 3.6E-07 40.1 15.5 136 2-141 165-305 (386)
276 3p5b_L Low density lipoprotein 97.4 0.013 4.4E-07 39.9 17.9 135 1-139 117-261 (400)
277 3a9g_A Putative uncharacterize 97.4 0.012 4.3E-07 39.3 13.1 65 1-67 34-113 (354)
278 3qqz_A Putative uncharacterize 97.3 0.013 4.4E-07 37.4 16.5 134 1-136 32-185 (255)
279 3v64_C Agrin; beta propeller, 97.3 0.017 5.7E-07 38.5 17.4 135 2-140 122-261 (349)
280 1tl2_A L10, protein (tachylect 97.2 0.0076 2.6E-07 37.7 9.8 133 1-141 46-199 (236)
281 1flg_A Protein (quinoprotein e 97.2 0.015 5.1E-07 41.6 12.5 55 17-73 291-359 (582)
282 3das_A Putative oxidoreductase 97.2 0.022 7.5E-07 38.1 14.4 67 1-67 37-115 (347)
283 1cru_A Protein (soluble quinop 97.2 0.029 1E-06 38.8 15.1 55 1-55 32-97 (454)
284 1n7d_A LDL receptor, low-densi 97.2 0.0023 7.9E-08 46.7 8.0 133 1-136 411-552 (699)
285 2p9w_A MAL S 1 allergenic prot 97.1 0.021 7E-07 37.9 11.4 106 4-111 74-215 (334)
286 2g8s_A Glucose/sorbosone dehyd 97.0 0.023 8E-07 37.9 11.2 54 1-55 23-86 (353)
287 3m0c_C LDL receptor, low-densi 97.0 0.066 2.3E-06 39.8 17.0 133 2-137 430-571 (791)
288 3pbp_A Nucleoporin NUP82; beta 97.0 0.023 7.9E-07 39.1 11.0 66 2-68 72-158 (452)
289 1w6s_A Methanol dehydrogenase 96.9 0.016 5.4E-07 41.6 10.5 111 7-119 62-199 (599)
290 3kya_A Putative phosphatase; s 96.9 0.053 1.8E-06 38.1 14.5 143 2-147 253-468 (496)
291 1n7d_A LDL receptor, low-densi 96.9 0.0049 1.7E-07 45.0 8.1 116 2-119 502-622 (699)
292 3p5b_L Low density lipoprotein 96.9 0.045 1.6E-06 37.2 17.0 117 1-119 207-328 (400)
293 4a2l_A BT_4663, two-component 96.9 0.075 2.6E-06 39.3 18.1 131 5-141 366-515 (795)
294 3sov_A LRP-6, low-density lipo 96.8 0.046 1.6E-06 36.0 15.9 115 1-118 127-245 (318)
295 1ijq_A LDL receptor, low-densi 96.8 0.045 1.5E-06 35.8 16.7 116 1-118 125-245 (316)
296 2be1_A Serine/threonine-protei 96.8 0.0034 1.2E-07 41.8 6.1 112 8-120 11-139 (339)
297 3pbp_A Nucleoporin NUP82; beta 96.8 0.06 2.1E-06 37.1 14.6 138 6-147 31-205 (452)
298 3sbq_A Nitrous-oxide reductase 96.8 0.029 1E-06 40.0 10.4 121 19-142 300-453 (638)
299 3sov_A LRP-6, low-density lipo 96.6 0.073 2.5E-06 35.0 17.7 108 2-111 85-197 (318)
300 4a2l_A BT_4663, two-component 96.5 0.15 5.1E-06 37.7 17.7 128 5-140 415-559 (795)
301 1tl2_A L10, protein (tachylect 96.5 0.066 2.3E-06 33.6 10.7 128 6-141 3-152 (236)
302 3v9f_A Two-component system se 96.5 0.15 5.2E-06 37.6 15.1 130 5-141 459-600 (781)
303 3sre_A PON1, serum paraoxonase 96.4 0.11 3.6E-06 34.9 16.5 136 2-141 56-238 (355)
304 3a9g_A Putative uncharacterize 96.4 0.11 3.7E-06 34.8 12.8 103 37-143 28-154 (354)
305 2xn4_A Kelch-like protein 2; s 96.3 0.1 3.5E-06 33.6 13.4 133 6-145 108-262 (302)
306 3sre_A PON1, serum paraoxonase 96.3 0.035 1.2E-06 37.2 8.3 72 37-110 220-297 (355)
307 2xbg_A YCF48-like protein; pho 96.3 0.12 4.1E-06 34.0 16.5 104 35-142 160-268 (327)
308 3amr_A 3-phytase; beta-propell 96.3 0.13 4.5E-06 34.4 15.6 125 16-142 98-250 (355)
309 3s94_A LRP-6, low-density lipo 96.3 0.2 6.7E-06 36.3 13.8 110 1-112 89-203 (619)
310 3ii7_A Kelch-like protein 7; p 96.2 0.13 4.5E-06 33.2 14.0 133 6-145 55-211 (306)
311 3s94_A LRP-6, low-density lipo 96.1 0.26 8.7E-06 35.7 17.2 134 1-138 45-185 (619)
312 2vpj_A Kelch-like protein 12; 96.1 0.15 5E-06 32.8 14.8 132 6-144 112-263 (301)
313 3m0c_C LDL receptor, low-densi 96.0 0.33 1.1E-05 36.2 17.0 110 1-112 476-590 (791)
314 2ism_A Putative oxidoreductase 95.9 0.2 6.8E-06 33.4 12.8 104 37-143 30-154 (352)
315 1zgk_A Kelch-like ECH-associat 95.9 0.18 6.2E-06 32.7 13.3 133 6-145 121-273 (308)
316 3ei3_A DNA damage-binding prot 95.9 0.18 6.1E-06 39.3 11.2 95 17-115 807-917 (1158)
317 4asc_A Kelch repeat and BTB do 95.8 0.21 7.3E-06 32.4 12.7 123 17-144 117-253 (315)
318 4a0p_A LRP6, LRP-6, low-densit 95.7 0.36 1.2E-05 35.0 17.7 133 1-138 42-180 (628)
319 3ei3_A DNA damage-binding prot 95.7 0.53 1.8E-05 36.7 13.4 101 9-111 897-999 (1158)
320 2xbg_A YCF48-like protein; pho 95.6 0.25 8.6E-06 32.4 16.3 134 2-142 169-311 (327)
321 3s25_A Hypothetical 7-bladed b 95.6 0.25 8.5E-06 32.3 12.1 124 3-140 60-200 (302)
322 2vpj_A Kelch-like protein 12; 95.5 0.26 8.7E-06 31.7 14.4 133 6-145 62-217 (301)
323 3sbq_A Nitrous-oxide reductase 95.3 0.33 1.1E-05 34.9 10.0 65 2-67 329-407 (638)
324 2woz_A Kelch repeat and BTB do 95.3 0.34 1.1E-05 31.5 12.6 135 6-145 109-264 (318)
325 2xn4_A Kelch-like protein 2; s 95.3 0.32 1.1E-05 31.3 13.5 133 6-145 61-215 (302)
326 4a0p_A LRP6, LRP-6, low-densit 95.1 0.65 2.2E-05 33.7 16.9 133 2-140 86-223 (628)
327 3v9f_A Two-component system se 95.0 0.73 2.5E-05 34.0 15.7 126 10-141 376-512 (781)
328 3ii7_A Kelch-like protein 7; p 95.0 0.4 1.4E-05 30.9 14.6 131 8-145 13-160 (306)
329 2uvk_A YJHT; unknown function, 94.9 0.48 1.6E-05 31.3 11.8 124 17-145 168-327 (357)
330 1zgk_A Kelch-like ECH-associat 94.6 0.53 1.8E-05 30.5 12.4 121 17-144 90-225 (308)
331 4asc_A Kelch repeat and BTB do 93.8 0.82 2.8E-05 29.6 13.2 120 19-144 69-206 (315)
332 3zwu_A Alkaline phosphatase PH 93.6 0.4 1.4E-05 34.5 7.5 55 1-55 481-548 (592)
333 2xzh_A Clathrin heavy chain 1; 93.5 1.1 3.8E-05 30.0 12.2 113 3-121 74-198 (365)
334 2woz_A Kelch repeat and BTB do 93.1 1.1 3.9E-05 29.0 13.4 119 19-144 80-216 (318)
335 2uvk_A YJHT; unknown function, 92.9 1.3 4.3E-05 29.2 13.4 83 59-144 168-262 (357)
336 3das_A Putative oxidoreductase 92.4 1.6 5.6E-05 29.2 13.3 110 33-144 27-160 (347)
337 1cru_A Protein (soluble quinop 92.3 2 6.8E-05 29.8 12.9 107 37-143 26-163 (454)
338 2xzh_A Clathrin heavy chain 1; 92.2 1.8 6E-05 29.1 9.7 65 3-67 267-331 (365)
339 2zwa_A Leucine carboxyl methyl 92.0 2.7 9.3E-05 30.9 15.0 135 6-143 397-559 (695)
340 4a9v_A PHOX; hydrolase, beta-p 90.2 1.8 6.1E-05 31.2 7.4 55 1-55 481-548 (592)
341 2zwa_A Leucine carboxyl methyl 90.1 4.4 0.00015 29.8 13.3 137 6-145 451-618 (695)
342 1bpo_A Protein (clathrin); cla 89.8 3.9 0.00013 28.7 10.1 65 3-67 266-330 (494)
343 4gq2_M Nucleoporin NUP120; bet 88.6 4.9 0.00017 30.8 9.3 35 84-118 238-273 (950)
344 2g8s_A Glucose/sorbosone dehyd 88.5 4 0.00014 27.2 14.8 56 91-147 288-347 (353)
345 4fhn_B Nucleoporin NUP120; pro 87.3 1.2 4.2E-05 34.7 5.5 30 3-32 245-274 (1139)
346 4fhn_B Nucleoporin NUP120; pro 86.5 4.5 0.00016 31.6 8.2 30 89-118 246-275 (1139)
347 4gq2_M Nucleoporin NUP120; bet 85.4 1.4 4.8E-05 33.7 4.9 30 3-32 243-272 (950)
348 1bpo_A Protein (clathrin); cla 85.2 7.9 0.00027 27.3 14.9 114 4-118 159-296 (494)
349 1xi4_A Clathrin heavy chain; a 84.7 5.6 0.00019 32.4 7.8 104 3-111 73-188 (1630)
350 1xi4_A Clathrin heavy chain; a 84.2 15 0.00053 30.0 9.9 122 15-144 46-171 (1630)
351 3f7f_A Nucleoporin NUP120; nuc 83.7 2.2 7.6E-05 31.6 5.1 30 4-33 228-257 (729)
352 3f7f_A Nucleoporin NUP120; nuc 82.8 3.2 0.00011 30.8 5.6 30 89-118 228-257 (729)
353 3zwu_A Alkaline phosphatase PH 75.1 21 0.00073 25.9 8.1 53 89-141 484-548 (592)
354 2wg3_C Hedgehog-interacting pr 74.1 20 0.00067 25.1 10.1 48 1-48 19-79 (463)
355 2wg3_C Hedgehog-interacting pr 73.7 20 0.00069 25.0 12.3 29 38-66 14-43 (463)
356 2be1_A Serine/threonine-protei 71.5 18 0.00063 24.1 6.4 65 49-115 10-80 (339)
357 3ott_A Two-component system se 70.7 29 0.001 25.6 15.7 104 5-114 481-589 (758)
358 3s25_A Hypothetical 7-bladed b 68.0 22 0.00076 23.1 11.4 99 2-110 151-254 (302)
359 4a9v_A PHOX; hydrolase, beta-p 67.4 33 0.0011 25.0 8.0 39 103-141 510-548 (592)
360 1q47_A Semaphorin 3A; beta pro 51.3 63 0.0021 22.9 7.2 55 9-63 423-487 (495)
361 3nvq_A Semaphorin-7A; beta-pro 44.7 90 0.0031 22.8 7.2 56 9-64 382-445 (590)
362 3ott_A Two-component system se 42.0 1E+02 0.0035 22.8 15.1 124 10-140 115-248 (758)
363 3al9_A Plexin-A2; beta-propell 38.7 68 0.0023 23.0 5.1 56 8-63 414-476 (539)
364 4gz8_A Semaphorin-3A; multi-do 37.0 1.3E+02 0.0044 22.4 7.2 55 9-63 431-495 (667)
365 3al9_A Plexin-A2; beta-propell 35.0 71 0.0024 22.9 4.7 53 93-145 414-472 (539)
366 4hvt_A Ritya.17583.B, post-pro 32.4 1.6E+02 0.0054 22.1 12.3 67 3-69 137-226 (711)
367 1q47_A Semaphorin 3A; beta pro 31.9 1.4E+02 0.0047 21.2 6.0 52 94-145 423-483 (495)
368 1olz_A Semaphorin 4D; developm 29.1 1.8E+02 0.0061 21.6 7.8 55 9-63 417-477 (663)
369 3uc1_A DNA gyrase subunit A; D 23.4 1.7E+02 0.0057 19.4 16.9 102 6-110 108-227 (327)
370 3qhy_B Beta-lactamase inhibito 21.7 1.6E+02 0.0056 18.7 12.6 87 16-109 41-127 (282)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-32 Score=179.57 Aligned_cols=145 Identities=12% Similarity=0.165 Sum_probs=135.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|+.|++||+++++.+..+.+|..++.+++|+|++++|++++.|++|++||++ .++....+.+ |
T Consensus 170 ~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~-h 247 (321)
T 3ow8_A 170 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGTLSG-H 247 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT-TCCEEEEECC-C
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC-CcceeEEEcC-C
Confidence 4789999999999999999999999999999999999999999999999999999999999999986 4466777888 9
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...|.++. +|++++|++++.|+.|++||+.+++++..+..|.. +|.+++|+|++++|++++.++.|.
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~g~~l~s~~~d~~i~ 315 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD-QVWGVKYNGNGSKIVSVGDDQEIH 315 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTCCEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC-cEEEEEECCCCCEEEEEeCCCeEE
Confidence 99999988 88999999999999999999999999999988988 699999999999999999998875
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.3e-31 Score=174.27 Aligned_cols=145 Identities=14% Similarity=0.202 Sum_probs=132.2
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|++|++||+++++.+..+..|..++.+++|+|++++|++|+.|++|++||+. .++....+.+ |
T Consensus 19 ~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~-~~~~~~~~~~-h 96 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-TGEKVVDFEA-H 96 (304)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-TCCEEEEEEC-C
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC-CCcEEEEEeC-C
Confidence 5799999999999999999999999999888899999999999999999999999999999999986 4577778888 9
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCC-eeeeeccCCCCcceeEEEEcC-CccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLGIAS-VLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~~~~~v~ 148 (150)
...|.++. +|+++++++++.|+.|++||++++ ...+.+..|.. .|.+++|+| ++.+|++|+.++.|.
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVK 166 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS-CEEEEEECTTCTTEEEEEETTSEEE
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC-cEEEEEECCCCCCEEEEEeCCCeEE
Confidence 99999998 889999999999999999999876 45677788888 699999999 679999999988764
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=170.80 Aligned_cols=145 Identities=12% Similarity=0.220 Sum_probs=134.1
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|+.+++||+++++....+..+...+.+++|+|++++|++++.|+.|++||++ .++....+.+ |
T Consensus 128 ~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~-~~~~~~~~~~-h 205 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA-TGKLLHTLEG-H 205 (321)
T ss_dssp EEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEECC-C
T ss_pred EEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECC-CCcEEEEEcc-c
Confidence 4789999999999999999999999998888888888999999999999999999999999999986 4577778888 9
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...|.++. +|++++|++++.|+.|++||+++++....+..|.. .|.+++|+|++++|++|+.++.|.
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~-~v~~~~~sp~~~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS-WVLNVAFCPDDTHFVSSSSDKSVK 273 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC-ceEEEEECCCCCEEEEEeCCCcEE
Confidence 99999988 89999999999999999999999998889989988 699999999999999999988764
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=1.2e-30 Score=177.16 Aligned_cols=145 Identities=14% Similarity=0.193 Sum_probs=134.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|+++++++++.|++|++||+.+++....+.+|.+.|.+++|+|++++|++|+.|++|++||+. ..+.+..+.+ |
T Consensus 114 ~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~-~~~~~~~~~~-h 191 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRTMHG-H 191 (410)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT-SSCEEECCCC-C
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceeEEEcC-C
Confidence 4799999999999999999999999999889999999999999999999999999999999999986 4477788888 9
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...|.++. +|+++++++++.|+.|++||+++++++..+..|.. .|..+.++|++.++++|+.++.|.
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE-WVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCeEE
Confidence 99999988 88999999999999999999999999999989988 599999999999999999988764
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=3.8e-30 Score=170.78 Aligned_cols=146 Identities=12% Similarity=0.167 Sum_probs=129.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc-c
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-L 79 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~ 79 (150)
++|+|+++++++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.|++|++||++.. +....+.. .
T Consensus 190 ~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~~~ 268 (340)
T 1got_B 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD-QELMTYSHDN 268 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTT
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC-cEEEEEccCC
Confidence 468999999999999999999999999988899999999999999999999999999999999999643 43333331 0
Q ss_pred cccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 80 SPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 80 ~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+...+.++. +|+++++++|+.|+.|++||+.+++.+..+..|.. +|.+++|+|+|.+|++|+.++.|.
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~-~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN-RVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEE
T ss_pred cccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC-cEEEEEEcCCCCEEEEEcCCccEE
Confidence 334688877 89999999999999999999999988889989988 699999999999999999998875
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=8.1e-30 Score=167.09 Aligned_cols=145 Identities=13% Similarity=0.196 Sum_probs=133.9
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|+.|++|+..+++....+..|...+.+++|+|++++|++++.|+.|++||++ .++....+.+ |
T Consensus 29 ~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~-~ 106 (312)
T 4ery_A 29 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS-SGKCLKTLKG-H 106 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEEEC-C
T ss_pred EEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC-CCcEEEEEcC-C
Confidence 4799999999999999999999999998888889999999999999999999999999999999986 4567778888 9
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...+.++. +++++++++++.|+.|++||+++++.+..+..|.. +|.+++|+|+++++++|+.++.|.
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC-cEEEEEEcCCCCEEEEEeCCCcEE
Confidence 99999887 88999999999999999999999998889988887 699999999999999999988764
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=7.9e-30 Score=167.99 Aligned_cols=144 Identities=18% Similarity=0.211 Sum_probs=130.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|++|++||+++++....+.+|...|.+++|+|++.+|++++.|++|++||++ ++....+.+ |
T Consensus 71 ~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~--~~~~~~~~~-h 147 (319)
T 3frx_A 71 CTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK--GQCLATLLG-H 147 (319)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT--SCEEEEECC-C
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeEEEEec-c
Confidence 4689999999999999999999999999999999999999999999999999999999999999985 466677778 8
Q ss_pred ccceeEee-ec------CCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KL------DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~------~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...+.++. .+ ++..+++++.|+.|++||+++.+....+..|.. +|.+++|+|++++|++|+.++.|.
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~sp~g~~l~s~~~dg~i~ 221 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNS-NINTLTASPDGTLIASAGKDGEIM 221 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCS-CEEEEEECTTSSEEEEEETTCEEE
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCC-cEEEEEEcCCCCEEEEEeCCCeEE
Confidence 88888876 44 345899999999999999999988888888988 699999999999999999988764
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=6.4e-30 Score=170.11 Aligned_cols=145 Identities=17% Similarity=0.172 Sum_probs=123.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCC-CEEEeecCCCeEEEEEcccccccccccc--
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSDRFV-- 77 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~-- 77 (150)
++|+|++++|++++.|++|++||+++++.+..+.+|.+.|.+++|++++ ..|++++.|++|++||++. ++....+.
T Consensus 133 v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~ 211 (344)
T 4gqb_B 133 VSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCS 211 (344)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS-SSCEEECC--
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc-cceeeeeecc
Confidence 4799999999999999999999999999999999999999999999987 4789999999999999964 34444443
Q ss_pred cccccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCc-cEEEecccccccc
Q 031924 78 GLSPNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVL-CFINSGFLSLNVN 148 (150)
Q Consensus 78 ~~~~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~~~~~~v~ 148 (150)
. +...+.++. ++ +++++++|+.||.|++||+++++++..+..|.. +|.+++|+|++ ++|++|+.++.|.
T Consensus 212 ~-~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 212 A-PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ-CVTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp ---CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS-CEEEEEECSSSSCCEEEEETTSCEE
T ss_pred e-eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCeEEEEEeCCCeEE
Confidence 3 445677776 55 567899999999999999999999999999988 69999999998 5899999988775
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=9.1e-30 Score=169.29 Aligned_cols=146 Identities=12% Similarity=0.153 Sum_probs=126.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeee---eeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc-cccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ---TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK-DCSDRF 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~ 76 (150)
++|+|++++|++++.|++|++||++.++.. ....+|...|.+++|+|++++|++++.|+++++|+..... +....+
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 579999999999999999999999887643 2236789999999999999999999999999999986432 456677
Q ss_pred ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCe---eeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 77 VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNR---IIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 77 ~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.+ |...|.++. +|++++|++++.|+.|++||+..+. .+..+..|.. +|.+++|+|++++|++|+.++.|.
T Consensus 102 ~~-h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d~~i~ 175 (345)
T 3fm0_A 102 EG-HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ-DVKHVVWHPSQELLASASYDDTVK 175 (345)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS-CEEEEEECSSSSCEEEEETTSCEE
T ss_pred cC-CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC-CeEEEEECCCCCEEEEEeCCCcEE
Confidence 88 999999998 8999999999999999999997653 4566778877 699999999999999999988764
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=1.9e-29 Score=167.72 Aligned_cols=146 Identities=15% Similarity=0.135 Sum_probs=127.7
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe--eeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc--cccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--DCSDRF 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~ 76 (150)
++|+|++++|++++.|+++++||...+. .+..+.+|...|.+++|+|++++|++++.|++|++||++... .....+
T Consensus 67 ~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 4799999999999999999999998764 567788999999999999999999999999999999986432 334566
Q ss_pred ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCe--eeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 77 VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 77 ~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.+ |...|.++. +|++++|++++.|+.|++||...++ ....+..|.. +|.+++|+|+|++|++|+.++.|.
T Consensus 147 ~~-h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~-~v~~l~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 147 NS-HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHES-TVWSLAFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp CC-CCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred cC-cCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCC-ceEEEEECCCCCEEEEEeCCCeEE
Confidence 67 889999988 8899999999999999999998765 4567778888 699999999999999999988764
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=2.8e-29 Score=164.33 Aligned_cols=146 Identities=14% Similarity=0.129 Sum_probs=126.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|++|++||+++++.+..+.+|.+.|.+++|+|++++|++|+.|++|++||++........+.+ |
T Consensus 61 ~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~-h 139 (304)
T 2ynn_A 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-H 139 (304)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC-C
T ss_pred EEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc-c
Confidence 368999999999999999999999999999999999999999999999999999999999999999754455667788 9
Q ss_pred ccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeecc-CCCCcceeEEEEcC--CccEEEecccccccc
Q 031924 81 PNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPIA-EHSEYPIESLGIAS--VLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~--~~~~l~s~~~~~~v~ 148 (150)
...|.++. +| ++..+++++.|+.|++||++.......+. .|.. ++..+.|+| ++.+|++|+.++.|.
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQER-GVNYVDYYPLPDKPYMITASDDLTIK 211 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTT-CEEEEEECCSTTCCEEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcC-cEEEEEEEEcCCCCEEEEEcCCCeEE
Confidence 99999988 66 67899999999999999998766554443 3434 689999986 788999999988764
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.6e-29 Score=165.53 Aligned_cols=146 Identities=14% Similarity=0.145 Sum_probs=122.2
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCC-------CeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc---
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRK-------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--- 70 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~--- 70 (150)
++|+|++++|++++.|++|++||++. .+....+.+|...|.+++|+|++++|++++.|++|++||++..+
T Consensus 64 v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~ 143 (330)
T 2hes_X 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY 143 (330)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe
Confidence 47999999999999999999999853 34566778999999999999999999999999999999984332
Q ss_pred ccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCC--eeeeeccCCCCcceeEEEEcCC--ccEEEeccccc
Q 031924 71 DCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPN--RIIQPIAEHSEYPIESLGIASV--LCFINSGFLSL 145 (150)
Q Consensus 71 ~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~~~~--~~~l~s~~~~~ 145 (150)
+....+.+ |...|.++. +|++++|++++.|+.|++||...+ +++..+..|.. +|.+++|+|+ +.+|++|+.++
T Consensus 144 ~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 144 ECISVLQE-HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG-TVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp EEEEEECC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECCSSSSCEEEEEETTS
T ss_pred EEEEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC-cEEEEEecCCCCeeEEEEEeCCC
Confidence 34556778 999999988 889999999999999999998766 57788888988 6999999998 77899999988
Q ss_pred ccc
Q 031924 146 NVN 148 (150)
Q Consensus 146 ~v~ 148 (150)
.|.
T Consensus 222 ~v~ 224 (330)
T 2hes_X 222 TVR 224 (330)
T ss_dssp CEE
T ss_pred eEE
Confidence 764
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=2e-29 Score=171.04 Aligned_cols=145 Identities=14% Similarity=0.222 Sum_probs=133.2
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeC--------------------CCEEEeecCCCe
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKN--------------------GRKVVCGSQSGT 60 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~d~~ 60 (150)
+.|+|+++++++++.|++|++||+.+++....+..|...+.+++|+|+ +.+|++|+.|++
T Consensus 240 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 357899999999999999999999999888889999999999999996 678999999999
Q ss_pred EEEEEcccccccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEE
Q 031924 61 VLLYSWGYFKDCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFIN 139 (150)
Q Consensus 61 i~i~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (150)
|++||++ .+.+...+.+ |...|.++. ++++++|++++.|+.|++||+.+++.+..+..|.. .|.+++|+|++.+|+
T Consensus 320 i~iwd~~-~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~l~ 396 (410)
T 1vyh_C 320 IKMWDVS-TGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH-FVTSLDFHKTAPYVV 396 (410)
T ss_dssp EEEEETT-TTEEEEEEEC-CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS-CEEEEEECSSSSCEE
T ss_pred EEEEECC-CCceEEEEEC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC-cEEEEEEcCCCCEEE
Confidence 9999986 4577788888 999999988 88999999999999999999999998899989988 699999999999999
Q ss_pred ecccccccc
Q 031924 140 SGFLSLNVN 148 (150)
Q Consensus 140 s~~~~~~v~ 148 (150)
+|+.++.|.
T Consensus 397 sgs~D~~i~ 405 (410)
T 1vyh_C 397 TGSVDQTVK 405 (410)
T ss_dssp EEETTSEEE
T ss_pred EEeCCCcEE
Confidence 999998875
No 14
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2.9e-29 Score=168.10 Aligned_cols=146 Identities=11% Similarity=0.083 Sum_probs=114.0
Q ss_pred CeeecCcceEEEE--cCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccc---------
Q 031924 1 MTFAADAMKLLGT--SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF--------- 69 (150)
Q Consensus 1 i~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~--------- 69 (150)
++|+||+++++++ +.|++|++||+++++.+..+. |...|.+++|+|+|+++++++.++.+.+|.....
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~ 217 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFD 217 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCC
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCC
Confidence 4799999998754 468999999999988776664 5667888888888888888876554444332110
Q ss_pred --------------------------------------c---ccccccccccccceeEee-ecCCCEEEEecCCCcEEEE
Q 031924 70 --------------------------------------K---DCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLV 107 (150)
Q Consensus 70 --------------------------------------~---~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~ 107 (150)
. .....+.+ |...|+++. +|++++|++|+.|+.|++|
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~D~~V~iw 296 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLASNDNSIALV 296 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence 0 00112334 667788887 8999999999999999999
Q ss_pred eccCCeeeeec-cCCCCcceeEEEEcCCccEEEeccccccccC
Q 031924 108 GILPNRIIQPI-AEHSEYPIESLGIASVLCFINSGFLSLNVNP 149 (150)
Q Consensus 108 d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~~ 149 (150)
|+++++++..+ ..|.. +|++++|+|||++|||||.++.|+.
T Consensus 297 d~~~~~~~~~~~~gH~~-~V~~v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 297 KLKDLSMSKIFKQAHSF-AITEVTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp ETTTTEEEEEETTSSSS-CEEEEEECTTSCEEEEEETTSEEEE
T ss_pred ECCCCcEEEEecCcccC-CEEEEEECCCCCEEEEEeCCCeEEE
Confidence 99999988875 67888 6999999999999999999988763
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=9.5e-29 Score=162.01 Aligned_cols=146 Identities=14% Similarity=0.222 Sum_probs=130.5
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|+.|++||+++++.+..+..|...+.+++|+|++++|++++.|+.|++||++ .++....+.. |
T Consensus 71 ~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~-~ 148 (312)
T 4ery_A 71 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK-TGKCLKTLPA-H 148 (312)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-TCCEEEEECC-C
T ss_pred EEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCEEEEEecC-C
Confidence 4799999999999999999999999999998999999999999999999999999999999999996 4466777778 8
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...+.++. +++++++++++.|+.|++||+++++.+..+..+...++..++|+|+++++++++.++.|.
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 217 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 217 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 88999888 889999999999999999999988877766444343699999999999999999888764
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=1.5e-28 Score=163.14 Aligned_cols=146 Identities=18% Similarity=0.258 Sum_probs=129.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc---ccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK---DCSDRFV 77 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~---~~~~~~~ 77 (150)
++|+|++++|++++.|++|++||+.+++....+..|...+.+++|+|+++++++++.|+.+++|++.... +....+.
T Consensus 61 ~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~ 140 (340)
T 1got_B 61 MHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA 140 (340)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec
Confidence 4789999999999999999999999998888888999999999999999999999999999999986432 2345566
Q ss_pred cccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 78 GLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 78 ~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+ |...+.++...++..+++++.|+.|++||+.+++.+..+..|.. +|.+++|+|+++++++|+.++.|.
T Consensus 141 ~-h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sg~~d~~v~ 209 (340)
T 1got_B 141 G-HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGACDASAK 209 (340)
T ss_dssp C-CSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred C-CCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCC-ceEEEEECCCCCEEEEEeCCCcEE
Confidence 7 88899988744445689999999999999999999999988988 699999999999999999988764
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1.2e-28 Score=164.49 Aligned_cols=145 Identities=15% Similarity=0.151 Sum_probs=125.2
Q ss_pred eeec--CcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc-
Q 031924 2 TFAA--DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (150)
Q Consensus 2 ~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~- 78 (150)
+|+| ++++|++++.|++|++||+++++.+..+..|...|.+++|+|++..|++++.|+++++||++.. +....+..
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~~ 281 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD-REVAIYSKE 281 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCT
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCC
Confidence 4555 5789999999999999999999999889999999999999999999999999999999999643 33333332
Q ss_pred ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 79 LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.+...+.++. +++++++++++.|+.|++||+.+++.+..+..|.. +|.+++|+|+|++|++|+.++.|.
T Consensus 282 ~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~-~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 282 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN-RVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS-CEEEEEECTTSSCEEEEETTSEEE
T ss_pred CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCC-cEEEEEECCCCCEEEEEcCCCCEE
Confidence 0234566776 88999999999999999999999988888889988 699999999999999999998775
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=7.6e-29 Score=165.60 Aligned_cols=145 Identities=11% Similarity=0.120 Sum_probs=117.5
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCC-EEEeecCCCeEEEEEcccc----------
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYF---------- 69 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~---------- 69 (150)
++|+|++++|++++.|+.|++||+++++.+..+..|...+.+++|++++. .+++++.|++|++||++..
T Consensus 145 v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~ 224 (357)
T 4g56_B 145 LSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA 224 (357)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecc
Confidence 47999999999999999999999999888777777777777777777653 5667777777777766421
Q ss_pred ----------------------------------cccccccccccccceeEee-ecCC-CEEEEecCCCcEEEEeccCCe
Q 031924 70 ----------------------------------KDCSDRFVGLSPNSVDALL-KLDE-DRVITGSENGLISLVGILPNR 113 (150)
Q Consensus 70 ----------------------------------~~~~~~~~~~~~~~v~~~~-~~~~-~~l~~~~~dg~i~~~d~~~~~ 113 (150)
++....+.+ |...|.++. +|++ ++|++++.|+.|++||+++++
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 234445556 778888887 6766 578999999999999999998
Q ss_pred eeeeccCCCCcceeEEEEcC-CccEEEecccccccc
Q 031924 114 IIQPIAEHSEYPIESLGIAS-VLCFINSGFLSLNVN 148 (150)
Q Consensus 114 ~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~~~~~v~ 148 (150)
.++.+ .|.+ +|++++|+| ++.+|++|+.++.|.
T Consensus 304 ~~~~~-~H~~-~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 304 VFRDL-SHRD-FVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEEC-CCSS-CEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EeEEC-CCCC-CEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 88776 7888 699999998 899999999998774
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1.9e-28 Score=165.43 Aligned_cols=144 Identities=17% Similarity=0.236 Sum_probs=125.5
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.|+++++||++. ++....+. +
T Consensus 129 v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~--~ 205 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT-GQCSLTLS--I 205 (393)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEE--C
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC-CeeEEEEE--c
Confidence 47899999999999999999999999998889999999999999999999999999999999999963 45555554 4
Q ss_pred ccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeec-------cCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPI-------AEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...+.++. ++ +++++++++.|+.|++||+++++.+..+ ..|.. .|.+++|+|++++|++|+.++.|.
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD-SVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS-CEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC-CEEEEEECCCCCEEEEEeCCCEEE
Confidence 55677766 66 8899999999999999999988776665 45767 699999999999999999988764
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=3.2e-28 Score=161.63 Aligned_cols=145 Identities=15% Similarity=0.117 Sum_probs=123.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccc-cccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-CSDRFVGL 79 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~ 79 (150)
++|+|+++++++++.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+..... ......+
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~- 160 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKEN- 160 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTS-
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccC-
Confidence 46899999999999999999999999999989999999999999999999999999999999999852211 1112235
Q ss_pred cccceeEee-ecCC----------CEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 80 SPNSVDALL-KLDE----------DRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 80 ~~~~v~~~~-~~~~----------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
|...+.++. ++++ .++++++.|+.|++||. ..+....+..|.. +|.+++|+|+|++|++|+.++.|.
T Consensus 161 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~-~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHES-NVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSS-CEEEEEECTTSSEEEEEETTCEEE
T ss_pred CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccc-cceEEEECCCCCEEEEEcCCCeEE
Confidence 778888887 6654 68999999999999994 5666677778888 699999999999999999988764
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.96 E-value=1.5e-28 Score=172.32 Aligned_cols=142 Identities=17% Similarity=0.240 Sum_probs=129.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|+.|++||.. ++.+..+..|...+.+++|+|++++|++++.|+.|++||.. ++..+.+.+ |
T Consensus 432 ~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~--~~~~~~~~~-h 507 (577)
T 2ymu_A 432 VAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTG-H 507 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT--SCEEEEEEC-C
T ss_pred EEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC--CCEEEEEeC-C
Confidence 4789999999999999999999964 56777888999999999999999999999999999999963 577888888 9
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...|+++. +|++++|++++.|+.|++||. +++.+..+..|.+ +|.+++|+|||++|+|++.++.|.
T Consensus 508 ~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~-~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 508 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEE
T ss_pred CCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCC-CEEEEEEcCCCCEEEEEeCCCEEE
Confidence 99999998 899999999999999999996 6788888889988 699999999999999999988764
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=5.8e-28 Score=161.17 Aligned_cols=146 Identities=16% Similarity=0.290 Sum_probs=128.7
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEe--CCCEEEeecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
+.|+|+++.|++++.|++|++||+++++.+..+.+|...+.+++|+| ++++|++|+.||++++||++ .++....+.+
T Consensus 160 ~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~-~~~~~~~~~~ 238 (354)
T 2pbi_B 160 CSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR-SGQCVQAFET 238 (354)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT-TCCEEEEECC
T ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC-CCcEEEEecC
Confidence 36889999999999999999999999999999999999999999987 47899999999999999996 4577778888
Q ss_pred ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCC-CcceeEEEEcCCccEEEecccccccc
Q 031924 79 LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
|...|.++. +|+++.|++++.|+.|++||++..+.+..+..+. ..++.+++|+|+++++++|+.++.|.
T Consensus 239 -h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~ 309 (354)
T 2pbi_B 239 -HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN 309 (354)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred -CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEE
Confidence 999999988 8899999999999999999999887766664332 23589999999999999999988765
No 23
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=2e-28 Score=164.63 Aligned_cols=144 Identities=19% Similarity=0.247 Sum_probs=120.9
Q ss_pred eeec-CcceEEEEcCCCeEEEEEcCC-CeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccc
Q 031924 2 TFAA-DAMKLLGTSGDGTLSVCNLRK-NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (150)
Q Consensus 2 ~~~~-~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 79 (150)
.|+| +++++++++.|++|++||++. ++.+..+.+|...|.+++|+|++++|++++.|++|++||++. ++....+..
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~- 289 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT-GHQLQVYNR- 289 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-TEEEEEECC-
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-CcEEEEecc-
Confidence 4555 788999999999999999984 466778889999999999999999999999999999999964 344444432
Q ss_pred c-------ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeec----cCCCCcceeEEEEcCCccEEEeccccccc
Q 031924 80 S-------PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPI----AEHSEYPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 80 ~-------~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
+ ...+.++. +++++++++|+.||.|++||+..++.+..+ ..|.. .|.+++|+|+|++|++|+.++.|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG-RISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC-CCCEEEECSSSSEEEEECTTSCE
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC-ceEEEEECCCCCEEEEeeCCCCE
Confidence 2 22367777 899999999999999999999888766655 56777 69999999999999999999887
Q ss_pred c
Q 031924 148 N 148 (150)
Q Consensus 148 ~ 148 (150)
.
T Consensus 369 ~ 369 (380)
T 3iz6_a 369 K 369 (380)
T ss_dssp E
T ss_pred E
Confidence 5
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=4.6e-28 Score=161.20 Aligned_cols=145 Identities=15% Similarity=0.160 Sum_probs=120.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeee----eeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT----RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 76 (150)
++|+|++ .|++++.||+|++||+++++... ...+|.+.|++++|+|+|++|++|+.|++|++||++ .++.+..+
T Consensus 88 ~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~-~~~~~~~~ 165 (344)
T 4gqb_B 88 LTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA-QQVVLSSY 165 (344)
T ss_dssp EEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEE
T ss_pred EEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEE
Confidence 4688885 67788999999999999886442 345799999999999999999999999999999996 45788888
Q ss_pred ccccccceeEee-ecCC-CEEEEecCCCcEEEEeccCCeeeeeccCC-CCcceeEEEEcC-CccEEEecccccccc
Q 031924 77 VGLSPNSVDALL-KLDE-DRVITGSENGLISLVGILPNRIIQPIAEH-SEYPIESLGIAS-VLCFINSGFLSLNVN 148 (150)
Q Consensus 77 ~~~~~~~v~~~~-~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~l~s~~~~~~v~ 148 (150)
.+ |...|.++. ++++ .++++++.|+.|++||+++++....+..+ ....+.+++|+| +++++++|+.++.|.
T Consensus 166 ~~-h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 166 RA-HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp CC-CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred cC-cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 89 999999988 6766 57899999999999999998877766422 222589999998 567899999888764
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=6.1e-28 Score=170.88 Aligned_cols=145 Identities=16% Similarity=0.149 Sum_probs=125.4
Q ss_pred CeeecCcc-eEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccc--
Q 031924 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV-- 77 (150)
Q Consensus 1 i~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-- 77 (150)
++|+|+++ .|++++.|++|++||.++++....+.+|...|.+++|+|+|++|++++.|++|++||... ++....+.
T Consensus 153 v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~-g~~~~~~~~~ 231 (611)
T 1nr0_A 153 VDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDD 231 (611)
T ss_dssp EEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCT
T ss_pred EEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC-CcEeeeeccc
Confidence 47899987 599999999999999999988888999999999999999999999999999999999853 34444442
Q ss_pred -----cccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeee----------------------------------
Q 031924 78 -----GLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQP---------------------------------- 117 (150)
Q Consensus 78 -----~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~---------------------------------- 117 (150)
+ |...|.++. +|++++|++++.|++|++||+.+++.+..
T Consensus 232 ~~~~~~-h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~ 310 (611)
T 1nr0_A 232 SLKNVA-HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 310 (611)
T ss_dssp TSSSCS-SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEE
T ss_pred cccccc-cCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEe
Confidence 6 899999988 89999999999999999999987664432
Q ss_pred ---------ccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 118 ---------IAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 118 ---------~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+..|.. +|.+++|+|+|++|++++.++.|.
T Consensus 311 ~~~~~~~~~~~gh~~-~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 311 PELGSIDQVRYGHNK-AITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp TTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCCcceEEcCCCC-CEEEEEEeCCCCEEEEEeCCCcEE
Confidence 335766 699999999999999999988764
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-27 Score=157.61 Aligned_cols=143 Identities=17% Similarity=0.140 Sum_probs=115.7
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCC--eeeeee-cc-CCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccc------cc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKN--TVQTRS-EF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF------KD 71 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~------~~ 71 (150)
+|+|+ +|++++.|++|++||++.+ +....+ .. |...|.+++|+|++++|++++.|++|++||+... .+
T Consensus 21 ~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 21 DFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCE
T ss_pred ccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccce
Confidence 46666 9999999999999999875 344444 34 8899999999999999999999999999998421 13
Q ss_pred cccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccC----CeeeeeccCCCCcceeEEEEcCCccEEEecccccc
Q 031924 72 CSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILP----NRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLN 146 (150)
Q Consensus 72 ~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~ 146 (150)
....+.+ |...|.++. +|++++|++++.|+.|++||++. .+.+..+..|.. +|.+++|+|++.+|++|+.++.
T Consensus 99 ~~~~~~~-h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 99 LLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ-DVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp EEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS-CEEEEEECSSSSEEEEEETTSC
T ss_pred eEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC-ceEEEEECCCCCEEEEEcCCCe
Confidence 4456778 999999988 89999999999999999999943 246677888888 6999999999999999999887
Q ss_pred cc
Q 031924 147 VN 148 (150)
Q Consensus 147 v~ 148 (150)
|.
T Consensus 177 i~ 178 (330)
T 2hes_X 177 VR 178 (330)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 27
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=1.8e-27 Score=160.04 Aligned_cols=146 Identities=16% Similarity=0.224 Sum_probs=125.8
Q ss_pred eeecC-cceEEEEcCCCeEEEEEcCCCeeeeee-----ccCCCcEEEEEEEe-CCCEEEeecCCCeEEEEEccccccccc
Q 031924 2 TFAAD-AMKLLGTSGDGTLSVCNLRKNTVQTRS-----EFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSD 74 (150)
Q Consensus 2 ~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~ 74 (150)
.|.|+ +..|++++.|++|++||+++++.+..+ .+|...+.+++|++ +++.|++|+.|++|++||++...+...
T Consensus 164 ~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~ 243 (380)
T 3iz6_a 164 QYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR 243 (380)
T ss_dssp BCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE
T ss_pred EEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE
Confidence 56775 557999999999999999999877655 56888999999987 789999999999999999975557777
Q ss_pred ccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCC------cceeEEEEcCCccEEEeccccccc
Q 031924 75 RFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSE------YPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 75 ~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
.+.+ |...|.++. +|++++|++++.|+.|++||+++++.+..+..+.. ..+.+++|+|+|+++++|+.++.|
T Consensus 244 ~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i 322 (380)
T 3iz6_a 244 TYHG-HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDC 322 (380)
T ss_dssp EECC-CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCE
T ss_pred EECC-cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCE
Confidence 8888 999999998 89999999999999999999999988777654322 138899999999999999998876
Q ss_pred c
Q 031924 148 N 148 (150)
Q Consensus 148 ~ 148 (150)
.
T Consensus 323 ~ 323 (380)
T 3iz6_a 323 Y 323 (380)
T ss_dssp E
T ss_pred E
Confidence 4
No 28
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=2.4e-27 Score=154.76 Aligned_cols=146 Identities=15% Similarity=0.086 Sum_probs=122.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCC--eeeeeeccCCCcEEEEEEEeC--CCEEEeecCCCeEEEEEccccc-ccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKN--TVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~-~~~~~ 75 (150)
++|+|++++|++++.|++|++||++.+ +.+..+.+|.++|.+++|+++ +++|++++.|++|++||++... .....
T Consensus 15 ~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~ 94 (297)
T 2pm7_B 15 AVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAV 94 (297)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEE
Confidence 479999999999999999999999753 567788999999999999864 8999999999999999986332 34455
Q ss_pred cccccccceeEee-ecC--CCEEEEecCCCcEEEEeccCCe--eeeeccCCCCcceeEEEEcCC-------------ccE
Q 031924 76 FVGLSPNSVDALL-KLD--EDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLGIASV-------------LCF 137 (150)
Q Consensus 76 ~~~~~~~~v~~~~-~~~--~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~~-------------~~~ 137 (150)
+.+ |...|.++. +|+ +.+|++++.|+.|++||+++.. ....+..|.. +|.+++|+|+ +++
T Consensus 95 ~~~-h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 95 HAV-HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp ECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS-CEEEEEECCCC------------CCE
T ss_pred eec-CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC-ccceEeecCCcccccccCCCCCCcce
Confidence 667 888999888 665 7899999999999999998653 2345567877 6999999997 579
Q ss_pred EEecccccccc
Q 031924 138 INSGFLSLNVN 148 (150)
Q Consensus 138 l~s~~~~~~v~ 148 (150)
|++|+.++.|.
T Consensus 173 l~sgs~D~~v~ 183 (297)
T 2pm7_B 173 FVTGGADNLVK 183 (297)
T ss_dssp EEEEETTSCEE
T ss_pred EEEEcCCCcEE
Confidence 99999988764
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=1.9e-27 Score=170.36 Aligned_cols=146 Identities=16% Similarity=0.152 Sum_probs=128.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccc--ccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD--CSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~ 78 (150)
++|+|++++|++++.|++|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||...... ......+
T Consensus 436 v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 515 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEG 515 (694)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTS
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCC
Confidence 47899999999999999999999999999889999999999999999999999999999999999752211 1122246
Q ss_pred ccccceeEee-ecCC--CEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 79 LSPNSVDALL-KLDE--DRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~--~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
|...|.++. ++++ ..+++++.|+.|++||+++++....+..|.. .|.+++|+|++++|++|+.++.|.
T Consensus 516 -h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~-~v~~v~~spdg~~l~sg~~Dg~i~ 586 (694)
T 3dm0_A 516 -HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG-YVSTVAVSPDGSLCASGGKDGVVL 586 (694)
T ss_dssp -CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSBCE
T ss_pred -CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC-CEEEEEEeCCCCEEEEEeCCCeEE
Confidence 788899887 6665 5899999999999999999998889989988 699999999999999999998775
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=4.4e-27 Score=153.50 Aligned_cols=146 Identities=12% Similarity=0.136 Sum_probs=120.9
Q ss_pred Ceeec--CcceEEEEcCCCeEEEEEcCCCe--eeeeeccCCCcEEEEEEEeC--CCEEEeecCCCeEEEEEcccccc-cc
Q 031924 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFKD-CS 73 (150)
Q Consensus 1 i~~~~--~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~~-~~ 73 (150)
++|+| ++++|++++.|++|++||+++++ .+..+..|...|.+++|+|+ +.+|++++.|++|++||++.... ..
T Consensus 59 v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 59 VDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp EEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC
T ss_pred EEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee
Confidence 36765 38899999999999999998874 45566788999999999997 89999999999999999964322 23
Q ss_pred cccccccccceeEee-ecC-------------CCEEEEecCCCcEEEEeccCCe----eeeeccCCCCcceeEEEEcCCc
Q 031924 74 DRFVGLSPNSVDALL-KLD-------------EDRVITGSENGLISLVGILPNR----IIQPIAEHSEYPIESLGIASVL 135 (150)
Q Consensus 74 ~~~~~~~~~~v~~~~-~~~-------------~~~l~~~~~dg~i~~~d~~~~~----~~~~~~~~~~~~i~~~~~~~~~ 135 (150)
..+.+ |...+.++. +|+ +++|++++.|+.|++||+++++ ....+..|.. +|.+++|+|++
T Consensus 139 ~~~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~-~V~~v~~sp~~ 216 (297)
T 2pm7_B 139 IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTV 216 (297)
T ss_dssp EEEEC-CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-CEEEEEECCCC
T ss_pred eeeec-ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC-ceEEEEECCCC
Confidence 44567 888898887 554 5799999999999999998755 5567788988 69999999984
Q ss_pred ---cEEEecccccccc
Q 031924 136 ---CFINSGFLSLNVN 148 (150)
Q Consensus 136 ---~~l~s~~~~~~v~ 148 (150)
.+|++|+.++.|.
T Consensus 217 ~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCI 232 (297)
T ss_dssp SSSEEEEEEETTSCEE
T ss_pred CCceEEEEEECCCcEE
Confidence 8999999988764
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=2.5e-27 Score=159.98 Aligned_cols=146 Identities=16% Similarity=0.250 Sum_probs=125.5
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCCeeeeee-------ccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccc---
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRS-------EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF--- 69 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~--- 69 (150)
++|+| ++++|++++.|+.|++||+++++.+..+ .+|...|.+++|+|++++|++++.|++|++||++..
T Consensus 212 ~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~ 291 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 291 (393)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCc
Confidence 36788 8999999999999999999998776655 568889999999999999999999999999998632
Q ss_pred --------cccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcC------C
Q 031924 70 --------KDCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIAS------V 134 (150)
Q Consensus 70 --------~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~------~ 134 (150)
+.+...+.+ |...+.++. ++++.+|++++.|+.|++||..+++.+..+..|.. +|.+++|++ +
T Consensus 292 ~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~-~v~~v~~~~~~~~~p~ 369 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN-SVISVAVANGSSLGPE 369 (393)
T ss_dssp ---------CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECSSCTTCTT
T ss_pred ccccCCCCCcceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC-CEEEEEecCCcCcCCC
Confidence 123345667 888898888 88999999999999999999999999999989988 699999886 7
Q ss_pred ccEEEecccccccc
Q 031924 135 LCFINSGFLSLNVN 148 (150)
Q Consensus 135 ~~~l~s~~~~~~v~ 148 (150)
+++|++|+.++.|.
T Consensus 370 ~~~l~sgs~Dg~i~ 383 (393)
T 1erj_A 370 YNVFATGSGDCKAR 383 (393)
T ss_dssp CEEEEEEETTSEEE
T ss_pred CCEEEEECCCCcEE
Confidence 89999999998775
No 32
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.5e-28 Score=164.55 Aligned_cols=146 Identities=13% Similarity=0.116 Sum_probs=121.5
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCC--eeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc--cccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKN--TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--DCSDRF 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~ 76 (150)
++|+|++++|++++.|+.|++||+.++ +....+..|...|.+++|+|++++|++++.|++|++||+.... .....+
T Consensus 17 ~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp CEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEEC
T ss_pred EEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEe
Confidence 589999999999999999999999988 6777888999999999999999999999999999999986432 134556
Q ss_pred ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCe---eeeeccC-CCCcceeEEEEcCCccEEEecccccccc
Q 031924 77 VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNR---IIQPIAE-HSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 77 ~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~-~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.. |...+.++. ++++++|++++.|+.|++||+++++ ....+.. |.. +|.+++|+|++++|++|+.++.|.
T Consensus 97 ~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 97 LR-LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS-TILSLDWHPNNVLLAAGCADRKAY 171 (377)
T ss_dssp CC-CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS-CEEEEEECTTSSEEEEEESSSCEE
T ss_pred cc-cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC-CeEEEEEcCCCCEEEEEeCCCEEE
Confidence 67 889999998 8899999999999999999998776 3566666 777 699999999999999999988764
No 33
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=3.2e-27 Score=155.10 Aligned_cols=144 Identities=13% Similarity=0.072 Sum_probs=111.5
Q ss_pred eeec---CcceEEEEcCCCeEEEEEcCCCeeeeeeccCC---CcEEEEEEEeCCCEE------------EeecCCCeEEE
Q 031924 2 TFAA---DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE---EELTSVVLMKNGRKV------------VCGSQSGTVLL 63 (150)
Q Consensus 2 ~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~d~~i~i 63 (150)
+|+| ++++|++++.|++|++||+++++.+..+.++. ..+.+++|+|+|.++ ++|+.|+++++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 5667 67899999999999999999999988887643 367788999999886 56788999999
Q ss_pred EEccccccccccc-----ccccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE
Q 031924 64 YSWGYFKDCSDRF-----VGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 64 ~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
||.. .++.+..+ .+ |.....+. ...+.++++++.|++|++||+.++++++++..|.+..+..++|+|||++|
T Consensus 265 Wd~~-tgk~l~v~~~~~p~G-h~~~~lsg-~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 265 INPK-TTLSVGVMLYCLPPG-QAGRFLEG-DVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp EETT-TTEEEEEEEECCCTT-CCCCEEEE-EEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred EECC-CCEEEEEEEeeccCC-CcceeEcc-ccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 9985 44544333 24 54443222 33478899999999999999999999999988877435568999999999
Q ss_pred Eecccccccc
Q 031924 139 NSGFLSLNVN 148 (150)
Q Consensus 139 ~s~~~~~~v~ 148 (150)
++|+.++.|.
T Consensus 342 aSGS~D~TIk 351 (356)
T 2w18_A 342 LAGQKDGNIF 351 (356)
T ss_dssp EEECTTSCEE
T ss_pred EEEECCCcEE
Confidence 9999999875
No 34
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=4.9e-27 Score=158.68 Aligned_cols=146 Identities=10% Similarity=0.094 Sum_probs=128.0
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCC-------eeeeeeccCCCcEEEEEEEeCC-CEEEeecCCCeEEEEEcccccc
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKN-------TVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKD 71 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~~~~~~~~ 71 (150)
++|+| ++++|++++.|+.|++||+.++ +.+..+.+|...|.+++|+|++ +.|++++.|+.|++||++. ++
T Consensus 87 ~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~ 165 (402)
T 2aq5_A 87 IAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-GA 165 (402)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT-TE
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC-CC
Confidence 47899 8999999999999999999987 5567788999999999999997 6999999999999999964 46
Q ss_pred ccccc--ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeec-cCCCCcceeEEEEcCCccEEEec---ccc
Q 031924 72 CSDRF--VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPI-AEHSEYPIESLGIASVLCFINSG---FLS 144 (150)
Q Consensus 72 ~~~~~--~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~---~~~ 144 (150)
....+ .. |...+.++. ++++++|++++.|+.|++||+++++.+..+ ..|.+..+.+++|+|+++++++| +.+
T Consensus 166 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d 244 (402)
T 2aq5_A 166 AVLTLGPDV-HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSE 244 (402)
T ss_dssp EEEEECTTT-CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCC
T ss_pred ccEEEecCC-CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCC
Confidence 66677 67 889999988 889999999999999999999999988887 67776448999999999999998 566
Q ss_pred cccc
Q 031924 145 LNVN 148 (150)
Q Consensus 145 ~~v~ 148 (150)
+.|.
T Consensus 245 ~~i~ 248 (402)
T 2aq5_A 245 RQVA 248 (402)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 6553
No 35
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=3.9e-27 Score=166.76 Aligned_cols=144 Identities=19% Similarity=0.147 Sum_probs=122.1
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCee--eeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccc--c
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV--QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR--F 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~--~ 76 (150)
++|+|++++|++++.|++|++||+..++. ... ..|...|++++|+|+|++|++++.|+++++|++...++.... +
T Consensus 454 va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~ 532 (611)
T 1nr0_A 454 VALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW 532 (611)
T ss_dssp EEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCC
T ss_pred EEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeee
Confidence 47899999999999999999999987653 233 678899999999999999999999999999998642444433 4
Q ss_pred ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCe-ee-eeccCC-CCcceeEEEEcCCccEEEecccccccc
Q 031924 77 VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNR-II-QPIAEH-SEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 77 ~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~-~~-~~~~~~-~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.+ |...|.++. +|++++|++++.|+.|++||+.++. .. ..+..| .. .|.+++|+|+++ |++++.++.|.
T Consensus 533 ~~-H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~-~v~~v~fs~d~~-l~s~~~D~~i~ 605 (611)
T 1nr0_A 533 TF-HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMS-SVNSVIWLNETT-IVSAGQDSNIK 605 (611)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTS-CEEEEEEEETTE-EEEEETTSCEE
T ss_pred ee-cccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCccc-CeeEEEEcCCCE-EEEecCCCCEE
Confidence 45 889999998 8999999999999999999998754 33 566678 56 699999999999 99999988764
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=5.1e-27 Score=164.49 Aligned_cols=142 Identities=16% Similarity=0.226 Sum_probs=128.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|+.|++||. +++.+..+..|...+.+++|+|++++|++++.|+.+++||.. ++....+.+ |
T Consensus 391 ~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~~~~~~~~-~ 466 (577)
T 2ymu_A 391 VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--GQLLQTLTG-H 466 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--SCEEEEEEC-C
T ss_pred EEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--CCEEEEEcC-C
Confidence 478999999999999999999995 466777888999999999999999999999999999999964 567777888 9
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...+.++. +|++++|++++.|+.|++||. +++.++.+..|.. +|++++|+|+|++|++++.++.|.
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~-~v~~l~~s~dg~~l~s~~~dg~v~ 533 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVRGVAFSPDGQTIASASDDKTVK 533 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCC-CEEEEEEcCCCCEEEEEECcCEEE
Confidence 99999988 899999999999999999995 6788888889988 699999999999999999988764
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=4.4e-27 Score=159.28 Aligned_cols=145 Identities=14% Similarity=0.176 Sum_probs=126.7
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~ 81 (150)
.|+|++++|++++.|+.|++||+++++....+..|...|.+++|+|++++|++++.|+.|++||++ .++....+.+ |.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~-h~ 181 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK-DGSNPRTLIG-HR 181 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCCCEEEEC-CS
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC-CCcCceEEcC-CC
Confidence 478999999999999999999999998888878999999999999999999999999999999996 4567778888 99
Q ss_pred cceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCC---C--------------------cceeEEEEcCCccE
Q 031924 82 NSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHS---E--------------------YPIESLGIASVLCF 137 (150)
Q Consensus 82 ~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~---~--------------------~~i~~~~~~~~~~~ 137 (150)
..|.++. ++++++|++++.|+.|++||+++++.+..+..+. . .++.+++|+|++++
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY 261 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE
Confidence 9999988 8899999999999999999999998888776432 1 13555566899999
Q ss_pred EEecccccccc
Q 031924 138 INSGFLSLNVN 148 (150)
Q Consensus 138 l~s~~~~~~v~ 148 (150)
+++|+.++.|.
T Consensus 262 l~~~~~dg~i~ 272 (420)
T 3vl1_A 262 VIAGHVSGVIT 272 (420)
T ss_dssp EEEEETTSCEE
T ss_pred EEEEcCCCeEE
Confidence 99999988764
No 38
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=3.5e-27 Score=155.18 Aligned_cols=146 Identities=16% Similarity=0.133 Sum_probs=122.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe--eeeeeccCCCcEEEEEEEe--CCCEEEeecCCCeEEEEEccccc-ccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~~~~~~~-~~~~~ 75 (150)
++|+|++++|++++.|++|++||+++++ .+..+.+|.+.|.+++|++ ++++|++++.|++|++||++... .....
T Consensus 19 v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~ 98 (316)
T 3bg1_A 19 AQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE 98 (316)
T ss_dssp EEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEE
T ss_pred eeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEE
Confidence 4799999999999999999999998875 4567889999999999986 48999999999999999986422 34456
Q ss_pred cccccccceeEee-ecC--CCEEEEecCCCcEEEEeccCCe---eeeeccCCCCcceeEEEEcCC---------------
Q 031924 76 FVGLSPNSVDALL-KLD--EDRVITGSENGLISLVGILPNR---IIQPIAEHSEYPIESLGIASV--------------- 134 (150)
Q Consensus 76 ~~~~~~~~v~~~~-~~~--~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~~~~--------------- 134 (150)
+.+ |...|.++. +|+ +.+|++++.|+.|++||++.+. ....+..|.. ++.+++|+|+
T Consensus 99 ~~~-h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
T 3bg1_A 99 HAG-HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI-GCNAVSWAPAVVPGSLIDHPSGQKP 176 (316)
T ss_dssp ECC-CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS-CBCCCEECCCCCC------CCSCCC
T ss_pred ccC-CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC-CcceEEEccccCCccccccccccCc
Confidence 677 899999988 666 7899999999999999998653 2455567777 6999999997
Q ss_pred --ccEEEecccccccc
Q 031924 135 --LCFINSGFLSLNVN 148 (150)
Q Consensus 135 --~~~l~s~~~~~~v~ 148 (150)
+++|++|+.++.|.
T Consensus 177 ~~~~~l~sgs~D~~v~ 192 (316)
T 3bg1_A 177 NYIKRFASGGCDNLIK 192 (316)
T ss_dssp CCCCBEECCBTTSBCC
T ss_pred cccceEEEecCCCeEE
Confidence 47899999988764
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1e-27 Score=160.48 Aligned_cols=143 Identities=14% Similarity=0.156 Sum_probs=120.1
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe---eeeeecc-CCCcEEEEEEEeCCCEEEeecCCCeEEEEEccc--------
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT---VQTRSEF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY-------- 68 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~-------- 68 (150)
++|+|++++|++++.|+.|++||++.++ ....+.. |...+.+++|+|++++|++++.|+.+++||++.
T Consensus 106 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 185 (377)
T 3dwl_C 106 VRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPE 185 (377)
T ss_dssp EECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCC
T ss_pred EEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcc
Confidence 4789999999999999999999999876 3566666 899999999999999999999999999999841
Q ss_pred ---------ccccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCee----eeeccCCCCcceeEEEEcCC
Q 031924 69 ---------FKDCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRI----IQPIAEHSEYPIESLGIASV 134 (150)
Q Consensus 69 ---------~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~----~~~~~~~~~~~i~~~~~~~~ 134 (150)
.++....+ + |...+.++. +|++++|++++.|+.|++||+.+++. +..+..|.. +|.+++|+|+
T Consensus 186 ~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~ 262 (377)
T 3dwl_C 186 ASVWGSRLPFNTVCAEY-P-SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQL-PLRSLLWANE 262 (377)
T ss_dssp SCSSCSCCCEEEEEECC-C-CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSS-CEEEEEEEET
T ss_pred ccccccccchhhhhhcc-c-CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCC-ceEEEEEcCC
Confidence 23455555 6 889999988 89999999999999999999998876 777878877 6999999999
Q ss_pred ccEEEecccccc
Q 031924 135 LCFINSGFLSLN 146 (150)
Q Consensus 135 ~~~l~s~~~~~~ 146 (150)
+++|++|+.+..
T Consensus 263 ~~~l~~~~~~~~ 274 (377)
T 3dwl_C 263 SAIVAAGYNYSP 274 (377)
T ss_dssp TEEEEEESSSSE
T ss_pred CCEEEEEcCCcE
Confidence 999999976543
No 40
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.4e-26 Score=152.50 Aligned_cols=144 Identities=19% Similarity=0.175 Sum_probs=124.3
Q ss_pred CeeecCc-ceEEEEcCCCeEEEEEcCC-----CeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccc
Q 031924 1 MTFAADA-MKLLGTSGDGTLSVCNLRK-----NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD 74 (150)
Q Consensus 1 i~~~~~~-~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~ 74 (150)
++|+|++ ++|++++.|++|++|++.. +..+..+.+|...|.+++|+|++++|++++.|++|++||++ .++...
T Consensus 23 l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~-~~~~~~ 101 (319)
T 3frx_A 23 LATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVA-TGETYQ 101 (319)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEE
T ss_pred EEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECC-CCCeeE
Confidence 4688864 8999999999999999864 23456788999999999999999999999999999999996 457778
Q ss_pred ccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCC------ccEEEeccccccc
Q 031924 75 RFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASV------LCFINSGFLSLNV 147 (150)
Q Consensus 75 ~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~s~~~~~~v 147 (150)
.+.+ |...|.++. +++++++++++.|+.|++||++ ++.+..+..|.. .+.+++|+|. +.++++++.++.|
T Consensus 102 ~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 102 RFVG-HKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHND-WVSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp EEEC-CSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSS-CEEEEEECCC------CCEEEEEETTSCE
T ss_pred EEcc-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCC-cEEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 8888 999999998 8899999999999999999996 456677778888 5999999985 4489999988876
Q ss_pred c
Q 031924 148 N 148 (150)
Q Consensus 148 ~ 148 (150)
.
T Consensus 179 ~ 179 (319)
T 3frx_A 179 K 179 (319)
T ss_dssp E
T ss_pred E
Confidence 4
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=1.7e-26 Score=152.13 Aligned_cols=146 Identities=17% Similarity=0.180 Sum_probs=123.3
Q ss_pred Ceeec--CcceEEEEcCCCeEEEEEcCCC---------eeeeeeccCCCcEEEEEEEeC--CCEEEeecCCCeEEEEEcc
Q 031924 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKN---------TVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWG 67 (150)
Q Consensus 1 i~~~~--~~~~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~~~~ 67 (150)
++|+| ++++|++++.|+.|++||++.+ +....+..|...+.+++|+|+ +.++++++.||.|++||++
T Consensus 63 ~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 142 (351)
T 3f3f_A 63 IDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDAL 142 (351)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred EEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence 46888 6899999999999999999886 456777889999999999999 9999999999999999975
Q ss_pred cccc-----------------------------------------------------------cccccccccccceeEee
Q 031924 68 YFKD-----------------------------------------------------------CSDRFVGLSPNSVDALL 88 (150)
Q Consensus 68 ~~~~-----------------------------------------------------------~~~~~~~~~~~~v~~~~ 88 (150)
.... ....+.+ |...|.++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~ 221 (351)
T 3f3f_A 143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG-HKSLIRSIS 221 (351)
T ss_dssp STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC-CCSCEEEEE
T ss_pred ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC-CCcceeEEE
Confidence 3210 1233446 788888888
Q ss_pred -ecCC----CEEEEecCCCcEEEEeccCC----------------------------------------------eeeee
Q 031924 89 -KLDE----DRVITGSENGLISLVGILPN----------------------------------------------RIIQP 117 (150)
Q Consensus 89 -~~~~----~~l~~~~~dg~i~~~d~~~~----------------------------------------------~~~~~ 117 (150)
++++ ++|++++.||.|++||++.+ +.+..
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE 301 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence 7777 79999999999999999764 56667
Q ss_pred ccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 118 IAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 118 ~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+..|.. +|.+++|+|++++|++|+.++.|.
T Consensus 302 ~~~h~~-~v~~~~~s~~~~~l~s~~~dg~v~ 331 (351)
T 3f3f_A 302 HDDHNG-EVWSVSWNLTGTILSSAGDDGKVR 331 (351)
T ss_dssp ECTTSS-CEEEEEECSSSCCEEEEETTSCEE
T ss_pred Eecccc-cEEEEEEcCCCCEEEEecCCCcEE
Confidence 778878 699999999999999999998774
No 42
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2.3e-26 Score=151.42 Aligned_cols=146 Identities=15% Similarity=0.156 Sum_probs=121.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCC----eeeeeeccCCCcEEEEEEEe--CCCEEEeecCCCeEEEEEccccc----
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFK---- 70 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~~~~~~~---- 70 (150)
++|+|++++|++++.|+.|++||+.++ +....+..|...|.+++|+| ++++|++++.||.|++||++...
T Consensus 17 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~ 96 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS 96 (351)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS
T ss_pred EEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc
Confidence 579999999999999999999999876 35667788999999999999 69999999999999999996432
Q ss_pred ----ccccccccccccceeEee-ecC--CCEEEEecCCCcEEEEeccCCee-----------------------------
Q 031924 71 ----DCSDRFVGLSPNSVDALL-KLD--EDRVITGSENGLISLVGILPNRI----------------------------- 114 (150)
Q Consensus 71 ----~~~~~~~~~~~~~v~~~~-~~~--~~~l~~~~~dg~i~~~d~~~~~~----------------------------- 114 (150)
+....+.. |...+.++. .++ ++++++++.||.|++||+++++.
T Consensus 97 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 97 GRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred ccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 33555667 889999988 777 89999999999999999865431
Q ss_pred -------------------------------eeeccCCCCcceeEEEEcCCc----cEEEecccccccc
Q 031924 115 -------------------------------IQPIAEHSEYPIESLGIASVL----CFINSGFLSLNVN 148 (150)
Q Consensus 115 -------------------------------~~~~~~~~~~~i~~~~~~~~~----~~l~s~~~~~~v~ 148 (150)
+..+..|.. +|.+++|+|++ ++|++|+.++.|.
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS-LIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS-CEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc-ceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 334445666 59999999998 8899999888764
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=2.7e-26 Score=152.42 Aligned_cols=142 Identities=16% Similarity=0.185 Sum_probs=120.5
Q ss_pred ec-CcceEEEEcCCCeEEEEEcCCC-------eeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccc
Q 031924 4 AA-DAMKLLGTSGDGTLSVCNLRKN-------TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (150)
Q Consensus 4 ~~-~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 75 (150)
++ ++++|++++.|++|++||+..+ .....+.+|...|.+++|+|++.++++++.|++|++||++ .++....
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~-~~~~~~~ 113 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLR-TGTTYKR 113 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETT-SSCEEEE
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-CCcEEEE
Confidence 55 8899999999999999999753 3456778999999999999999999999999999999996 4577778
Q ss_pred cccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeee--ccCCCCcceeEEEEcCCc----------cEEEecc
Q 031924 76 FVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQP--IAEHSEYPIESLGIASVL----------CFINSGF 142 (150)
Q Consensus 76 ~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~~~~~----------~~l~s~~ 142 (150)
+.+ |...|.++. +|++++|++++.|+.|++||+........ ...|.. .|.+++|+|++ .++++++
T Consensus 114 ~~~-h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 114 FVG-HQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSD-WVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp EEC-CCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSS-CEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred EcC-CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCc-eeeeeeeccccccccccCCCCCEEEEEc
Confidence 888 999999988 89999999999999999999974433222 225666 59999999987 7899999
Q ss_pred cccccc
Q 031924 143 LSLNVN 148 (150)
Q Consensus 143 ~~~~v~ 148 (150)
.++.|.
T Consensus 192 ~d~~i~ 197 (343)
T 2xzm_R 192 WDGRLK 197 (343)
T ss_dssp TTSEEE
T ss_pred CCCEEE
Confidence 888764
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=7.2e-27 Score=158.23 Aligned_cols=146 Identities=18% Similarity=0.281 Sum_probs=121.9
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc--
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-- 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-- 78 (150)
++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.+++||++. ++....+..
T Consensus 145 ~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~ 223 (420)
T 3vl1_A 145 LKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT-GTTIHTFNRKE 223 (420)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECBTT
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC-CceeEEeecCC
Confidence 47999999999999999999999999988888899999999999999999999999999999999863 355554442
Q ss_pred cccccee---------------------Eee-ecCCCEEEEecCCCcEEEEeccCCeeeeecc-CCCCcceeEEEEcCCc
Q 031924 79 LSPNSVD---------------------ALL-KLDEDRVITGSENGLISLVGILPNRIIQPIA-EHSEYPIESLGIASVL 135 (150)
Q Consensus 79 ~~~~~v~---------------------~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 135 (150)
.+...+. ++. +++++++++++.||.|++||+++++.+..+. .|.. ++.+++|+|++
T Consensus 224 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~ 302 (420)
T 3vl1_A 224 NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC-SCNSLTVDGNN 302 (420)
T ss_dssp BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS-CEEEEEECSSC
T ss_pred CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCC-CceeEEEeCCC
Confidence 0223333 333 5788899999999999999999887666654 4556 69999999999
Q ss_pred c-EEEecccccccc
Q 031924 136 C-FINSGFLSLNVN 148 (150)
Q Consensus 136 ~-~l~s~~~~~~v~ 148 (150)
. +|++|+.++.|.
T Consensus 303 ~~~l~~g~~dg~i~ 316 (420)
T 3vl1_A 303 ANYIYAGYENGMLA 316 (420)
T ss_dssp TTEEEEEETTSEEE
T ss_pred CCEEEEEeCCCeEE
Confidence 9 999999988764
No 45
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=2e-26 Score=166.85 Aligned_cols=145 Identities=14% Similarity=0.205 Sum_probs=132.2
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.||.|++||+.+++.+..+..|...+.+++|+|++++|++++.||.|++||+. .++....+.+ |
T Consensus 19 i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~-~~~~~~~~~~-~ 96 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-TGEKVVDFEA-H 96 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-TCCEEEEEEC-C
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC-CCcEEEEEec-C
Confidence 5799999999999999999999999999999999999999999999999999999999999999986 4577778888 9
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCC-eeeeeccCCCCcceeEEEEcC-CccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLGIAS-VLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~~~~~v~ 148 (150)
...+.++. +++++.+++++.||.|++||+.++ .....+..|.. +|.+++|+| ++..+++++.++.|.
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS-CEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC-cEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 99999988 889999999999999999999876 66777778877 699999999 899999999888764
No 46
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=2.6e-26 Score=172.47 Aligned_cols=145 Identities=12% Similarity=0.119 Sum_probs=133.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|+++++++++.||+|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+. .++....+.+ |
T Consensus 621 ~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~-~~~~~~~~~~-~ 698 (1249)
T 3sfz_A 621 ACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA-TGKLVHTYDE-H 698 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEEEC-C
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC-CCceEEEEcC-C
Confidence 4799999999999999999999999999999999999999999999999999999999999999996 4577888888 9
Q ss_pred ccceeEee-ec--CCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KL--DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...+.++. ++ ++..+++++.|+.|++||+.+++....+..|.. +|.+++|+|+++++++|+.++.|.
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~-~v~~~~~sp~~~~l~s~s~dg~v~ 768 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN-SVNHCRFSPDDELLASCSADGTLR 768 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS-CEEEEEECSSTTEEEEEESSSEEE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC-CEEEEEEecCCCEEEEEECCCeEE
Confidence 99999888 56 556899999999999999999999999989988 699999999999999999988764
No 47
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=4.3e-26 Score=151.47 Aligned_cols=144 Identities=13% Similarity=0.075 Sum_probs=120.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEE--EeCCCEEEeecCCCeEEEEEccccc--------
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVL--MKNGRKVVCGSQSGTVLLYSWGYFK-------- 70 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~i~~~~~~~-------- 70 (150)
++|+|++++|++++.|+.|++||+++++... ...|...+.+++| ++++++|++++.|+.|++||++...
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 170 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP 170 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC
Confidence 4799999999999999999999999987665 5668899999999 8889999999999999999975321
Q ss_pred --------------------------------------------------------------------------------
Q 031924 71 -------------------------------------------------------------------------------- 70 (150)
Q Consensus 71 -------------------------------------------------------------------------------- 70 (150)
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 171 ERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp SCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH
T ss_pred CCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc
Confidence
Q ss_pred -cccccccccccc------------ceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc
Q 031924 71 -DCSDRFVGLSPN------------SVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC 136 (150)
Q Consensus 71 -~~~~~~~~~~~~------------~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (150)
.....+.+ |.. .+.++. ++++++|++++.||.|++||+.+++.+..+..|.. +|.+++|+|+|+
T Consensus 251 ~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g~ 328 (368)
T 3mmy_A 251 AKDNFTFKC-HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ-PISACCFNHNGN 328 (368)
T ss_dssp HHHSEEEEC-SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS-CEEEEEECTTSS
T ss_pred cccceeeee-eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC-CceEEEECCCCC
Confidence 00111122 222 577777 88999999999999999999999999999988888 699999999999
Q ss_pred EEEeccccccc
Q 031924 137 FINSGFLSLNV 147 (150)
Q Consensus 137 ~l~s~~~~~~v 147 (150)
+|++|+.++..
T Consensus 329 ~l~~~s~d~~~ 339 (368)
T 3mmy_A 329 IFAYASSYDWS 339 (368)
T ss_dssp CEEEEECCCST
T ss_pred eEEEEeccccc
Confidence 99999887644
No 48
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=2.1e-26 Score=157.18 Aligned_cols=144 Identities=13% Similarity=0.145 Sum_probs=115.6
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCCee--eeeeccCCCcEEEEEEEe-CCCEEEeecCCCeEEEEEccccccccccc
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTV--QTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 76 (150)
|+|+| ++++|++|+.||.|++||+.+++. ...+.+|.+.|++++|+| ++++|++++.||+|++||++. .....+
T Consensus 125 l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~--~~~~~~ 202 (435)
T 4e54_B 125 LAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG--NILRVF 202 (435)
T ss_dssp EEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS--CEEEEE
T ss_pred EEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC--CceeEE
Confidence 57999 567999999999999999987653 345568999999999998 689999999999999999863 222222
Q ss_pred ccc--cccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc-EEEecccccccc
Q 031924 77 VGL--SPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC-FINSGFLSLNVN 148 (150)
Q Consensus 77 ~~~--~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~~~~v~ 148 (150)
... +...+.++. ++++++|++|+.||.|++||++ ++.+..+..|.. +|.+++|+|++. ++++|+.++.|.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~-~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 203 ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKK-KVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSS-CEEEEEECTTCSSEEEEEETTSBCC
T ss_pred eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccc-eEEeeeecCCCceEEEEecCcceee
Confidence 210 233455666 8899999999999999999986 456677778888 699999999876 788998888764
No 49
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.9e-27 Score=163.19 Aligned_cols=144 Identities=10% Similarity=0.081 Sum_probs=120.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe-eeeeeccCCCcEEEE--EEEeCC-CEEEeecCCCeEEEEEccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-VQTRSEFSEEELTSV--VLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~ 76 (150)
++|+|+ ..|++|+.||+|++||+++++ +...+..|...|.++ .|+|++ .+|++++.|++|++||++. ++....+
T Consensus 272 v~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~ 349 (524)
T 2j04_B 272 FDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTT 349 (524)
T ss_dssp EEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEE
T ss_pred EEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCccccc
Confidence 367775 479999999999999998764 445678899999999 567887 8999999999999999963 3555555
Q ss_pred cccccc--ceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 77 VGLSPN--SVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 77 ~~~~~~--~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.+ |.. .+.++. +|+++.+++++.|+.|++||++++.++..+..|.. +|.+++|+|+|++|++|+.++.|.
T Consensus 350 ~~-~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~-~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 350 VS-RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRET-TITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp EE-ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSS-CEEEEECCSSCCBCEEEETTTEEE
T ss_pred cc-ccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCC-ceEEEEeCCCCCeEEEEECCCEEE
Confidence 55 543 366666 88899999999999999999999888777878988 699999999999999999998875
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=9.1e-26 Score=150.42 Aligned_cols=146 Identities=9% Similarity=0.090 Sum_probs=123.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe--eeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc-ccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK-DCSDRFV 77 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~ 77 (150)
++|+|++++|++++.|+.|++||+.+++ ....+..|...+.+++|+|++++|++++.|+.|++||++... .....+.
T Consensus 14 ~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 93 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL 93 (372)
T ss_dssp EEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECC
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee
Confidence 4799999999999999999999999987 778888999999999999999999999999999999986432 1122335
Q ss_pred cccccceeEee-ecCCCEEEEecCCCcEEEEeccCCe---eeee-ccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 78 GLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNR---IIQP-IAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 78 ~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~---~~~~-~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
. |...+.++. +++++++++++.|+.|++||+..++ .... ...|.. +|.+++|+|+++++++++.++.|.
T Consensus 94 ~-~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~ 167 (372)
T 1k8k_C 94 R-INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS-TVLSLDWHPNSVLLAAGSCDFKCR 167 (372)
T ss_dssp C-CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred c-CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC-CeeEEEEcCCCCEEEEEcCCCCEE
Confidence 5 788899888 8899999999999999999998765 2233 345666 699999999999999999887764
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.4e-26 Score=154.03 Aligned_cols=146 Identities=10% Similarity=0.130 Sum_probs=129.8
Q ss_pred CeeecC-cceEEEEcCCCeEEEEEcCCCeeeeeeccC------CCcEEEEEEEeCC-CEEEeecCCC---eEEEEEcccc
Q 031924 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKNTVQTRSEFS------EEELTSVVLMKNG-RKVVCGSQSG---TVLLYSWGYF 69 (150)
Q Consensus 1 i~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~i~i~~~~~~ 69 (150)
++|+|+ +.++++++.|+.|++||+++++.+..+..+ ...+.+++|+|++ ..+++++.|+ .|++||++..
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 478998 789999999999999999999888777766 7889999999997 6899999998 9999999754
Q ss_pred cccccccc-cccccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCc-cEEEeccccc
Q 031924 70 KDCSDRFV-GLSPNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVL-CFINSGFLSL 145 (150)
Q Consensus 70 ~~~~~~~~-~~~~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~~~~~ 145 (150)
......+. + |...+.++. ++ ++++|++++.|+.|++||+++++.+..+..|.. +|.+++|+|++ .++++++.++
T Consensus 251 ~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 251 NTPLQTLNQG-HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN-WCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp TSCSBCCCSC-CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS-CCCCEEECTTCTTEEEECCSSS
T ss_pred CCCcEEeecC-ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC-ceEEEEECCCCCCEEEEEecCC
Confidence 46677777 7 899999988 77 899999999999999999999999999988888 69999999999 8999999988
Q ss_pred ccc
Q 031924 146 NVN 148 (150)
Q Consensus 146 ~v~ 148 (150)
.|.
T Consensus 329 ~i~ 331 (416)
T 2pm9_A 329 KIE 331 (416)
T ss_dssp EEE
T ss_pred cEE
Confidence 764
No 52
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=1e-26 Score=152.95 Aligned_cols=146 Identities=18% Similarity=0.149 Sum_probs=119.8
Q ss_pred Ceeec--CcceEEEEcCCCeEEEEEcCCCe--eeeeeccCCCcEEEEEEEeC--CCEEEeecCCCeEEEEEcccccc--c
Q 031924 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFKD--C 72 (150)
Q Consensus 1 i~~~~--~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~~--~ 72 (150)
++|+| ++++|++++.|++|++||+++++ ....+.+|...|.+++|+|+ +.+|++++.|++|++||++.... .
T Consensus 63 v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 63 VAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp EEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred EEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 36765 48899999999999999998874 45667789999999999998 78999999999999999864322 2
Q ss_pred ccccccccccceeEee-ecC-----------------CCEEEEecCCCcEEEEeccCC---eeeeeccCCCCcceeEEEE
Q 031924 73 SDRFVGLSPNSVDALL-KLD-----------------EDRVITGSENGLISLVGILPN---RIIQPIAEHSEYPIESLGI 131 (150)
Q Consensus 73 ~~~~~~~~~~~v~~~~-~~~-----------------~~~l~~~~~dg~i~~~d~~~~---~~~~~~~~~~~~~i~~~~~ 131 (150)
...+.+ |...+.++. +|+ +++|++++.|+.|++||++.. +.+..+..|.. +|.+++|
T Consensus 143 ~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~-~V~~v~~ 220 (316)
T 3bg1_A 143 KKINNA-HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD-WVRDVAW 220 (316)
T ss_dssp CCBTTS-SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS-CEEEEEC
T ss_pred eeeecc-ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC-ceEEEEe
Confidence 345556 777777766 554 468999999999999999754 46677888988 6999999
Q ss_pred cCCc----cEEEecccccccc
Q 031924 132 ASVL----CFINSGFLSLNVN 148 (150)
Q Consensus 132 ~~~~----~~l~s~~~~~~v~ 148 (150)
+|++ .+|++|+.++.|.
T Consensus 221 sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEE
T ss_pred cCCCCCCCceEEEEcCCCeEE
Confidence 9987 8999999988764
No 53
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=1.5e-25 Score=146.60 Aligned_cols=144 Identities=15% Similarity=0.171 Sum_probs=109.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeec--cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccc---------
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF--------- 69 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~--------- 69 (150)
|+||+++ +|++| .|++|++||+++++.+..+. .|...|++++|+|++++|++|+.||+|++||++..
T Consensus 31 l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h 108 (318)
T 4ggc_A 31 VDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH 108 (318)
T ss_dssp EEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCc
Confidence 4788875 66666 58999999999998776554 66778999999999999999999999999997532
Q ss_pred -------------------------------------------------------------------------ccc----
Q 031924 70 -------------------------------------------------------------------------KDC---- 72 (150)
Q Consensus 70 -------------------------------------------------------------------------~~~---- 72 (150)
++.
T Consensus 109 ~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 188 (318)
T 4ggc_A 109 SARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP 188 (318)
T ss_dssp SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCC
T ss_pred cceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccc
Confidence 000
Q ss_pred cccc--------------------------------------------ccccccceeEee-ecCCCEEEE--ecCCCcEE
Q 031924 73 SDRF--------------------------------------------VGLSPNSVDALL-KLDEDRVIT--GSENGLIS 105 (150)
Q Consensus 73 ~~~~--------------------------------------------~~~~~~~v~~~~-~~~~~~l~~--~~~dg~i~ 105 (150)
.... .. +...+..+. .++++.+++ ++.|+.|+
T Consensus 189 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 189 LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLV 267 (318)
T ss_dssp SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEE
Confidence 0000 00 111222233 445555554 44799999
Q ss_pred EEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 106 LVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 106 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+||+++++.+..+.+|.+ +|.+++|+|+|++|+||+.++.|.
T Consensus 268 iwd~~~~~~~~~l~gH~~-~V~~l~~spdg~~l~S~s~D~~v~ 309 (318)
T 4ggc_A 268 IWKYPTMAKVAELKGHTS-RVLSLTMSPDGATVASAAADETLR 309 (318)
T ss_dssp EEETTTCCEEEEECCCSS-CEEEEEECTTSSCEEEEETTTEEE
T ss_pred EEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEecCCeEE
Confidence 999999999999999988 699999999999999999998774
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=1.6e-26 Score=157.78 Aligned_cols=144 Identities=14% Similarity=0.119 Sum_probs=118.9
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCCeeeeeec--cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccc
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV 77 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~ 77 (150)
|+|+| ++++|++++.|++|++||++++....... .+...+.+++|+|++++|++|+.||.|++||++ ++.+..+.
T Consensus 170 l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~--~~~~~~~~ 247 (435)
T 4e54_B 170 LKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD--GKELWNLR 247 (435)
T ss_dssp EEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS--SCBCCCSB
T ss_pred EEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC--cceeEEEe
Confidence 47898 68899999999999999998765433332 234467899999999999999999999999985 46677788
Q ss_pred cccccceeEee-ecCCC-EEEEecCCCcEEEEeccCCeeeee---ccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 78 GLSPNSVDALL-KLDED-RVITGSENGLISLVGILPNRIIQP---IAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 78 ~~~~~~v~~~~-~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+ |...|.++. +|+++ ++++++.|+.|++||+++.+.... ...|.. +|.+++|+|+|++|++|+.++.|.
T Consensus 248 ~-h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~spdg~~l~s~~~D~~i~ 321 (435)
T 4e54_B 248 M-HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRH-PVNAACFSPDGARLLTTDQKSEIR 321 (435)
T ss_dssp C-CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSS-CEEECCBCTTSSEEEEEESSSCEE
T ss_pred c-ccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccc-cccceeECCCCCeeEEEcCCCEEE
Confidence 8 999999988 77665 788999999999999987654333 346777 699999999999999999988764
No 55
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.2e-26 Score=167.95 Aligned_cols=145 Identities=12% Similarity=0.090 Sum_probs=120.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeee----ee--ec-----cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ----TR--SE-----FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~----~~--~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~ 69 (150)
++|+|++++|++++.|++|++||+.++... .. +. +|...|.+++|+|++++|++|+.||+|++|++...
T Consensus 441 v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 441 KLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp CCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred ccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence 468999999999999999999999887421 11 11 67889999999999999999999999999998632
Q ss_pred c--------------------------------------------ccccccccccccceeEee-ecCCCEEEEecCCCcE
Q 031924 70 K--------------------------------------------DCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLI 104 (150)
Q Consensus 70 ~--------------------------------------------~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i 104 (150)
. ++...+.+ |...|.++. +|+| +|++|+.|++|
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~-h~~~V~svafSpdG-~lAsgs~D~tv 598 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA-NKGKTSAINNSNIG-FVGIAYAAGSL 598 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC-CSCSEEEEEECBTS-EEEEEETTSEE
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc-CCCcEEEEEecCCc-EEEEEeCCCcE
Confidence 1 12455667 899999998 8999 99999999999
Q ss_pred EEEeccCCeeee-----ecc-CCCCcceeEEEEc-----CCc---cEEEecccccccc
Q 031924 105 SLVGILPNRIIQ-----PIA-EHSEYPIESLGIA-----SVL---CFINSGFLSLNVN 148 (150)
Q Consensus 105 ~~~d~~~~~~~~-----~~~-~~~~~~i~~~~~~-----~~~---~~l~s~~~~~~v~ 148 (150)
++||+++...+. .+. .|.. .|++++|+ ||| ++|++|+.++.|.
T Consensus 599 ~lwd~~~~~~~~~~~~~~~~~gh~~-~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~ 655 (902)
T 2oaj_A 599 MLIDRRGPAIIYMENIREISGAQSA-CVTCIEFVIMEYGDDGYSSILMVCGTDMGEVI 655 (902)
T ss_dssp EEEETTTTEEEEEEEGGGTCSSCCC-CEEEEEEEEEECTTSSSEEEEEEEEETTSEEE
T ss_pred EEEECCCCeEEEEeehhHhcccccc-ceEEEEEEEEecCCCCCcceEEEEEecCCcEE
Confidence 999998776543 343 6777 59999999 885 8999999998774
No 56
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.94 E-value=2.1e-25 Score=147.06 Aligned_cols=146 Identities=13% Similarity=0.125 Sum_probs=118.1
Q ss_pred CeeecC-cceEEEEcCCCeEEEEEcCCCe-----eeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc----
Q 031924 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKNT-----VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK---- 70 (150)
Q Consensus 1 i~~~~~-~~~l~~~~~d~~i~i~d~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~---- 70 (150)
|+|+|+ +++|++++.|++|++||+.+.+ +...+.+|...|.+++|+|++++|++++.|+.+++|+.....
T Consensus 44 v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~ 123 (340)
T 4aow_A 44 IATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR 123 (340)
T ss_dssp EEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeee
Confidence 579997 6899999999999999998753 456778899999999999999999999999999999874320
Q ss_pred --------------------------------------ccccccccccccceeEee-ec--CCCEEEEecCCCcEEEEec
Q 031924 71 --------------------------------------DCSDRFVGLSPNSVDALL-KL--DEDRVITGSENGLISLVGI 109 (150)
Q Consensus 71 --------------------------------------~~~~~~~~~~~~~v~~~~-~~--~~~~l~~~~~dg~i~~~d~ 109 (150)
.......+ |...+..+. .+ ...++++++.|+.|++||+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~ 202 (340)
T 4aow_A 124 FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 202 (340)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSS-CSSCEEEEEECSCSSSCEEEEEETTSCEEEEET
T ss_pred ecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEecc-ccCcccceEEccCCCCcEEEEEcCCCEEEEEEC
Confidence 00111223 455566554 33 3457889999999999999
Q ss_pred cCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 110 LPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 110 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
++++.+..+..|.. +|.+++|+|++++|++|+.++.|.
T Consensus 203 ~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~Dg~i~ 240 (340)
T 4aow_A 203 ANCKLKTNHIGHTG-YLNTVTVSPDGSLCASGGKDGQAM 240 (340)
T ss_dssp TTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTCEEE
T ss_pred CCCceeeEecCCCC-cEEEEEECCCCCEEEEEeCCCeEE
Confidence 99999999988988 699999999999999999988764
No 57
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.8e-26 Score=151.61 Aligned_cols=144 Identities=12% Similarity=0.015 Sum_probs=113.5
Q ss_pred Ceeec--CcceEEEEcCCCeEEEEEcCCCeeeeeec-cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccc-ccc
Q 031924 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCS-DRF 76 (150)
Q Consensus 1 i~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~-~~~ 76 (150)
++|+| +++++++++.|++|++||+++++...... .+...+.+++|+|++.+|++|+.||.|++||++.. +.. ..+
T Consensus 131 ~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~-~~~~~~~ 209 (343)
T 3lrv_A 131 MYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP-DQASSRF 209 (343)
T ss_dssp EECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT-TSCCEEC
T ss_pred EEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-CCCccEE
Confidence 46889 99999999999999999999988765553 44557999999999999999999999999999744 433 445
Q ss_pred ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccC---CCCccee--EEEEcCCccEEEeccc-cccc
Q 031924 77 VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAE---HSEYPIE--SLGIASVLCFINSGFL-SLNV 147 (150)
Q Consensus 77 ~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---~~~~~i~--~~~~~~~~~~l~s~~~-~~~v 147 (150)
...|...|.++. ++++.+|++++ ++.|++||+++.+....+.. |.. ++. +++|+|+|++|++++. ++.+
T Consensus 210 ~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~s~~d~~i 285 (343)
T 3lrv_A 210 PVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEF-KTGTVTYDIDDSGKNMIAYSNESNSL 285 (343)
T ss_dssp CCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC------CCEEEEECTTSSEEEEEETTTTEE
T ss_pred eccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccc-cccceEEEECCCCCEEEEecCCCCcE
Confidence 432788999998 89999999999 55999999998876555543 322 344 5999999999999776 5544
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=1e-25 Score=148.25 Aligned_cols=145 Identities=13% Similarity=0.218 Sum_probs=124.2
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeee---eeec--cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc-cccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ---TRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK-DCSD 74 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~-~~~~ 74 (150)
++|+|+++++++++ |+.|++||+.+++.. ..+. .|...+.+++|+|+++++++++.|+.+++||++... ....
T Consensus 57 ~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 135 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA 135 (337)
T ss_dssp EEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEE
T ss_pred EEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceee
Confidence 47899999999998 999999999876532 2222 688899999999999999999999999999986432 1445
Q ss_pred ccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 75 RFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 75 ~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.+.. |...+.++. +++++.+++++.|+.|++||+++++.+..+..|.. ++.+++|+|+++++++++.++.|.
T Consensus 136 ~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~ 208 (337)
T 1gxr_A 136 ELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-GASCIDISNDGTKLWTGGLDNTVR 208 (337)
T ss_dssp EEEC-SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEE
T ss_pred eccc-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC-ceEEEEECCCCCEEEEEecCCcEE
Confidence 5667 888898887 88999999999999999999999999888888888 699999999999999999887764
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=2.3e-25 Score=146.57 Aligned_cols=144 Identities=17% Similarity=0.232 Sum_probs=126.7
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe--eeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
++|+|+++++++++.|+.|++||+++++ ....+..|...+.+++|+|+++++++++.|+.+++||++ .++....+..
T Consensus 103 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~-~~~~~~~~~~ 181 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQG 181 (337)
T ss_dssp EEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEECC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC-CCceeeeeec
Confidence 4789999999999999999999999876 556677888999999999999999999999999999986 3466777778
Q ss_pred ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 79 LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
|...+.++. +++++.+++++.|+.|++||+++++.+..+ .+.. ++.+++|+|+++++++++.++.|.
T Consensus 182 -~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~-~v~~~~~s~~~~~l~~~~~~~~i~ 249 (337)
T 1gxr_A 182 -HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTS-QIFSLGYCPTGEWLAVGMESSNVE 249 (337)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred -ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee-cCCC-ceEEEEECCCCCEEEEEcCCCcEE
Confidence 889999988 889999999999999999999998887777 4555 599999999999999999887664
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=1.3e-25 Score=150.70 Aligned_cols=144 Identities=11% Similarity=0.119 Sum_probs=122.5
Q ss_pred CeeecCc-ceEEEEcCCCeEEEEEcCCCeeeeeec--cCCCcEEEEEEEe-CCCEEEeecCCCeEEEEEccccccccccc
Q 031924 1 MTFAADA-MKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 1 i~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 76 (150)
++|+|++ ++|++++.|+.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.|++||++. .....+
T Consensus 79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~ 156 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG--SVIQVF 156 (383)
T ss_dssp EEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS--CEEEEE
T ss_pred EEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC--CceEEE
Confidence 4789998 899999999999999999887665554 6899999999999 789999999999999999963 444444
Q ss_pred cc--ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc-EEEecccccccc
Q 031924 77 VG--LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC-FINSGFLSLNVN 148 (150)
Q Consensus 77 ~~--~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~~~~v~ 148 (150)
.. .+...+.++. +++++.+++++.|+.|++||+ +++.+..+..|.. .|.+++|+|+++ ++++|+.++.|.
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d~~i~ 230 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA-KVTHAEFNPRCDWLMATSSVDATVK 230 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS-CEEEEEECSSCTTEEEEEETTSEEE
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC-cEEEEEECCCCCCEEEEEeCCCEEE
Confidence 33 0347788888 899999999999999999999 5677788888888 699999999999 999999887764
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.94 E-value=1.5e-25 Score=150.63 Aligned_cols=145 Identities=12% Similarity=0.105 Sum_probs=126.2
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeecc---C---CCcEEEEEEEeCCCEEEeecCC---CeEEEEEcccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF---S---EEELTSVVLMKNGRKVVCGSQS---GTVLLYSWGYFKD 71 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~i~i~~~~~~~~ 71 (150)
++|+|++ ++++++.|+.|++||+++++.+..+.. | ...+.+++|+|++++|++++.| +.|++||++. ++
T Consensus 192 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~ 269 (397)
T 1sq9_A 192 VDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GE 269 (397)
T ss_dssp EEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CC
T ss_pred EEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC-Cc
Confidence 4689999 999999999999999999988888888 8 8999999999999999999999 9999999864 35
Q ss_pred cccccccc------------cccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeecc------CC-----------
Q 031924 72 CSDRFVGL------------SPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIA------EH----------- 121 (150)
Q Consensus 72 ~~~~~~~~------------~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~------~~----------- 121 (150)
....+.+. |...+.++. ++++++|++++.||.|++||+.+++.+..+. .|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 349 (397)
T 1sq9_A 270 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG 349 (397)
T ss_dssp EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccc
Confidence 55555431 567788887 8899999999999999999999999888887 66
Q ss_pred ----CCcceeEEEEcCCc----------cEEEecccccccc
Q 031924 122 ----SEYPIESLGIASVL----------CFINSGFLSLNVN 148 (150)
Q Consensus 122 ----~~~~i~~~~~~~~~----------~~l~s~~~~~~v~ 148 (150)
.. +|.+++|+|++ ++|++|+.++.|.
T Consensus 350 ~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 350 DSLAEP-GVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp CBCSSC-CEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred ccccCC-ceeEEEeccccccccccccccceEEEecCCCcEE
Confidence 66 69999999998 7999999988775
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.5e-26 Score=152.56 Aligned_cols=145 Identities=16% Similarity=0.103 Sum_probs=129.9
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|+.|++||+++++....+..|...+.+++|+|++ .+++++.|+.+++||++ .++....+.. |
T Consensus 253 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~-~~~~~~~~~~-~ 329 (425)
T 1r5m_A 253 LEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLK-QNTLLALSIV-D 329 (425)
T ss_dssp EEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETT-TTEEEEEEEC-T
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECC-CCcEeEeccc-C
Confidence 4789999999999999999999999988888888899999999999999 99999999999999986 3466777777 8
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCe--------------------eeeeccCCCCc-ceeEEEEcCCccEE
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNR--------------------IIQPIAEHSEY-PIESLGIASVLCFI 138 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~--------------------~~~~~~~~~~~-~i~~~~~~~~~~~l 138 (150)
...+.++. ++++++|++++.||.|++||+.+++ .+..+..|... +|.+++|+|++++|
T Consensus 330 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 409 (425)
T 1r5m_A 330 GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKI 409 (425)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEE
T ss_pred CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceE
Confidence 88999887 8899999999999999999998877 78888777552 59999999999999
Q ss_pred Eecccccccc
Q 031924 139 NSGFLSLNVN 148 (150)
Q Consensus 139 ~s~~~~~~v~ 148 (150)
++++.++.|.
T Consensus 410 ~~~~~dg~i~ 419 (425)
T 1r5m_A 410 SVAYSLQEGS 419 (425)
T ss_dssp EEEESSSCCE
T ss_pred EEEecCceEE
Confidence 9999998775
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.1e-25 Score=150.07 Aligned_cols=146 Identities=16% Similarity=0.090 Sum_probs=124.7
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcC--CCeeeeeeccCCCcEEEEEEEeC--CCEEEeecCCCeEEEEEccccc-ccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLR--KNTVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~-~~~~~ 75 (150)
++|+|++++|++++.|+.|++||+. +++....+..|...|.+++|+++ +++|++++.||.|++||+.... .....
T Consensus 17 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 96 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 96 (379)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeee
Confidence 4799999999999999999999998 45567788899999999999987 9999999999999999996432 25566
Q ss_pred cccccccceeEee-ecC--CCEEEEecCCCcEEEEeccCCe--eeeeccCCCCcceeEEEEcC-------------CccE
Q 031924 76 FVGLSPNSVDALL-KLD--EDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLGIAS-------------VLCF 137 (150)
Q Consensus 76 ~~~~~~~~v~~~~-~~~--~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~-------------~~~~ 137 (150)
+.. |...+.++. +++ ++++++++.|+.|++||+.... ....+..|.. +|.+++|+| ++.+
T Consensus 97 ~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T 3jrp_A 97 HAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRK 174 (379)
T ss_dssp ECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT-CEEEEEECCCC----------CTTCE
T ss_pred ecC-CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC-ceEEEEEcCccccccccccCCCCCCE
Confidence 667 888999988 777 8999999999999999998763 3344557777 699999999 6999
Q ss_pred EEecccccccc
Q 031924 138 INSGFLSLNVN 148 (150)
Q Consensus 138 l~s~~~~~~v~ 148 (150)
+++|+.++.|.
T Consensus 175 l~~~~~dg~i~ 185 (379)
T 3jrp_A 175 FVTGGADNLVK 185 (379)
T ss_dssp EEEEETTSCEE
T ss_pred EEEEeCCCeEE
Confidence 99999988764
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=2.1e-25 Score=148.68 Aligned_cols=144 Identities=15% Similarity=0.124 Sum_probs=123.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCee---e-eeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcc---------
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV---Q-TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG--------- 67 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~--------- 67 (150)
++|+|++++|++++.|+.|++||++.++. . .....|...+.+++|+|++++|++++.|+.+++||++
T Consensus 102 ~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 181 (372)
T 1k8k_C 102 VRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA 181 (372)
T ss_dssp EEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC
T ss_pred EEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccc
Confidence 47899999999999999999999988752 2 3335678899999999999999999999999999963
Q ss_pred --------cccccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE
Q 031924 68 --------YFKDCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 68 --------~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
..++....+.. |...+.++. ++++++|++++.|+.|++||+++++.+..+..|.. ++.+++|+|+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l 259 (372)
T 1k8k_C 182 PTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETL-PLLAVTFITESSLV 259 (372)
T ss_dssp CBTTBSCCCTTCEEEECCC-CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSC-CEEEEEEEETTEEE
T ss_pred ccccccccchhhheEecCC-CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCC-CeEEEEEecCCCEE
Confidence 12355666667 888899988 88999999999999999999999999888888877 69999999999999
Q ss_pred Eeccccccc
Q 031924 139 NSGFLSLNV 147 (150)
Q Consensus 139 ~s~~~~~~v 147 (150)
++| .++.|
T Consensus 260 ~~~-~d~~i 267 (372)
T 1k8k_C 260 AAG-HDCFP 267 (372)
T ss_dssp EEE-TTSSC
T ss_pred EEE-eCCeE
Confidence 988 56554
No 65
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=3.5e-25 Score=148.58 Aligned_cols=142 Identities=14% Similarity=0.083 Sum_probs=121.7
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCCeeeeeecc---CCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccc
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSEF---SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 76 (150)
++|+| ++++|++++.|+.|++||++.. ....+.. +...+.+++|+|++++|++++.|+.|++||++ ++....+
T Consensus 124 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~ 200 (383)
T 3ei3_B 124 MKFNQFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--GHEIFKE 200 (383)
T ss_dssp EEEETTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--SCEEEEE
T ss_pred EEeCCCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--CCEEEEe
Confidence 47899 7899999999999999999964 4444433 34789999999999999999999999999984 5677778
Q ss_pred ccccccceeEee-ecCCC-EEEEecCCCcEEEEeccC----CeeeeeccCCCCcceeEEEEcC-CccEEEecccccccc
Q 031924 77 VGLSPNSVDALL-KLDED-RVITGSENGLISLVGILP----NRIIQPIAEHSEYPIESLGIAS-VLCFINSGFLSLNVN 148 (150)
Q Consensus 77 ~~~~~~~v~~~~-~~~~~-~l~~~~~dg~i~~~d~~~----~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~~~~~v~ 148 (150)
.+ |...+.++. +++++ ++++++.|+.|++||+++ +..+..+ .|.. +|.+++|+| ++++|++++.++.|.
T Consensus 201 ~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~-~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 201 KL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK-PVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS-CEEEEEECTTTSCEEEEEESSSEEE
T ss_pred cc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC-ceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 88 999999988 88888 999999999999999987 5566666 6777 699999999 999999999887764
No 66
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.94 E-value=1.4e-25 Score=149.84 Aligned_cols=145 Identities=15% Similarity=0.138 Sum_probs=113.8
Q ss_pred CeeecCcceEEEEcC------CCeEEEEEcCCCeee----eeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc
Q 031924 1 MTFAADAMKLLGTSG------DGTLSVCNLRKNTVQ----TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK 70 (150)
Q Consensus 1 i~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~ 70 (150)
++|+|||++|++++. |+.+++|+..++... .....|...|.+++|+|++++ ++++.||+|++||+....
T Consensus 48 v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~ 126 (357)
T 4g56_B 48 VRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKE 126 (357)
T ss_dssp EEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC------
T ss_pred EEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccc
Confidence 579999999999987 788999998876533 334467888999999999864 567789999999986432
Q ss_pred cc-cc--ccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc-EEEeccccc
Q 031924 71 DC-SD--RFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC-FINSGFLSL 145 (150)
Q Consensus 71 ~~-~~--~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~~~ 145 (150)
.. .. ...+ |...|.++. +|++++|++++.|+.|++||+.+++.+..+..|.. .|.+++|+|++. ++++++.++
T Consensus 127 ~~~~~~~~~~~-h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~~~s~~~dg 204 (357)
T 4g56_B 127 SLLVNKFAKYE-HDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS-EVNCVAACPGKDTIFLSCGEDG 204 (357)
T ss_dssp --CCCCEEECC-CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTCSSCEEEEETTS
T ss_pred eeEEEeeccCC-CCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCceeeeeccCC
Confidence 11 11 2236 888999998 89999999999999999999999999999999988 699999999875 788998887
Q ss_pred ccc
Q 031924 146 NVN 148 (150)
Q Consensus 146 ~v~ 148 (150)
.|.
T Consensus 205 ~v~ 207 (357)
T 4g56_B 205 RIL 207 (357)
T ss_dssp CEE
T ss_pred ceE
Confidence 664
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.3e-25 Score=147.30 Aligned_cols=146 Identities=12% Similarity=0.140 Sum_probs=123.8
Q ss_pred CeeecC--cceEEEEcCCCeEEEEEcCCCe--eeeeeccCCCcEEEEEEEeC--CCEEEeecCCCeEEEEEccccc-ccc
Q 031924 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCS 73 (150)
Q Consensus 1 i~~~~~--~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~-~~~ 73 (150)
++|+|+ +++|++++.|+.|++||+++++ ....+..|...+.+++|+|+ +.+|++++.|+.|++||++... ...
T Consensus 61 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 140 (379)
T 3jrp_A 61 VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 140 (379)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE
T ss_pred EEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee
Confidence 467776 8999999999999999999987 66777788999999999999 9999999999999999996442 223
Q ss_pred cccccccccceeEee-ec-------------CCCEEEEecCCCcEEEEeccCCe----eeeeccCCCCcceeEEEEcCC-
Q 031924 74 DRFVGLSPNSVDALL-KL-------------DEDRVITGSENGLISLVGILPNR----IIQPIAEHSEYPIESLGIASV- 134 (150)
Q Consensus 74 ~~~~~~~~~~v~~~~-~~-------------~~~~l~~~~~dg~i~~~d~~~~~----~~~~~~~~~~~~i~~~~~~~~- 134 (150)
..+.. |...+.++. ++ +++.+++++.|+.|++||+++++ ....+..|.. +|.+++|+|+
T Consensus 141 ~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~-~v~~~~~sp~~ 218 (379)
T 3jrp_A 141 IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTV 218 (379)
T ss_dssp EEEEC-CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-CEEEEEECCCC
T ss_pred EEecC-CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC-cEeEEEECCCC
Confidence 34456 888899888 66 58999999999999999997653 4556777877 6999999999
Q ss_pred --ccEEEecccccccc
Q 031924 135 --LCFINSGFLSLNVN 148 (150)
Q Consensus 135 --~~~l~s~~~~~~v~ 148 (150)
+++|++++.++.|.
T Consensus 219 ~~~~~l~s~~~dg~i~ 234 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCI 234 (379)
T ss_dssp SSSEEEEEEETTSCEE
T ss_pred CCCCeEEEEeCCCEEE
Confidence 89999999988764
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=3.6e-25 Score=149.64 Aligned_cols=144 Identities=12% Similarity=0.171 Sum_probs=126.7
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.||.|++||+++++.+..+..|...+.+++| ++..+++++.||.|++||++........+.+ |
T Consensus 140 v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~ 216 (401)
T 4aez_A 140 VKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQG-H 216 (401)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC-C
T ss_pred EEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcC-C
Confidence 479999999999999999999999999999899999999999999 4679999999999999999755566777788 9
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCc-cEEEecc--cccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVL-CFINSGF--LSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~~--~~~~v~ 148 (150)
...+.++. +++++++++++.|+.|++||+++++.+..+..|.. +|.+++|+|++ .++++|+ .++.|.
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA-AVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS-CCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc-eEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 99999988 88999999999999999999999888888888877 69999999976 5666654 566553
No 69
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.1e-26 Score=157.75 Aligned_cols=146 Identities=12% Similarity=0.023 Sum_probs=117.4
Q ss_pred CeeecC------cceEEEEcCCCeEEEEEcCCCee-----------eeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEE
Q 031924 1 MTFAAD------AMKLLGTSGDGTLSVCNLRKNTV-----------QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (150)
Q Consensus 1 i~~~~~------~~~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 63 (150)
++|+|+ +.+|++++.|++|++||+..++. ...+.+|...+++++|+++ ..|++|+.||+|++
T Consensus 213 v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~l 291 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAE 291 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEE
T ss_pred EEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEE
Confidence 467875 57999999999999999987532 2356778899999999986 47999999999999
Q ss_pred EEcccccccccccccccccceeEe--e-ecCC-CEEEEecCCCcEEEEeccCCeeeeeccCCCC-cceeEEEEcCCccEE
Q 031924 64 YSWGYFKDCSDRFVGLSPNSVDAL--L-KLDE-DRVITGSENGLISLVGILPNRIIQPIAEHSE-YPIESLGIASVLCFI 138 (150)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~v~~~--~-~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l 138 (150)
||++........+.+ |...|.++ . ++++ ++|++++.|++|++||+++++....+..|.. ..+.+++|+|+++.+
T Consensus 292 WD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 292 FDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred EECCCCCCceEEeec-ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 999644344455778 99999988 4 5666 8999999999999999998776666655532 137899999999999
Q ss_pred Eecccccccc
Q 031924 139 NSGFLSLNVN 148 (150)
Q Consensus 139 ~s~~~~~~v~ 148 (150)
++++.+..|.
T Consensus 371 ~s~~~d~tv~ 380 (524)
T 2j04_B 371 IYSDGASSLR 380 (524)
T ss_dssp EEECSSSEEE
T ss_pred EEeCCCCcEE
Confidence 9988876553
No 70
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.6e-25 Score=145.27 Aligned_cols=144 Identities=10% Similarity=0.127 Sum_probs=127.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCC-CeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRK-NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 79 (150)
++|+|+++++++++.|+.|++||+.+ ++....+..|...+.+++|+|++++|++++.|+.|++||++. ++....+.
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~-- 257 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST-LQVLKKYE-- 257 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEE--
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC-Cceeeeec--
Confidence 36899999999999999999999998 677888888999999999999999999999999999999863 45555554
Q ss_pred cccceeEee-ecCCCEEEEecCCC--------------cEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 80 SPNSVDALL-KLDEDRVITGSENG--------------LISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 80 ~~~~v~~~~-~~~~~~l~~~~~dg--------------~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
+...+..+. +++++.+++++.++ .+++||..+++.+..+..|.. +|.+++|+|++++|++++.+
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG-PLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSEEEEEETT
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC-cEEEEEECCCCCEEEEEcCC
Confidence 456677776 89999999999888 899999999999999988888 69999999999999999999
Q ss_pred cccc
Q 031924 145 LNVN 148 (150)
Q Consensus 145 ~~v~ 148 (150)
+.|.
T Consensus 337 g~v~ 340 (369)
T 3zwl_B 337 GFIR 340 (369)
T ss_dssp SEEE
T ss_pred CeEE
Confidence 8775
No 71
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.2e-25 Score=151.32 Aligned_cols=145 Identities=12% Similarity=0.150 Sum_probs=124.1
Q ss_pred CeeecCcceE-EEEcCCCeEEEEEcC--CCeeeeeec--cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccc---c
Q 031924 1 MTFAADAMKL-LGTSGDGTLSVCNLR--KNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD---C 72 (150)
Q Consensus 1 i~~~~~~~~l-~~~~~d~~i~i~d~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~---~ 72 (150)
++|+|++++| ++++.|+.|++||+. +++.+..+. .+...+.+++|+|++++|++++.+|.+++|++..... .
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc
Confidence 4799999996 888899999999999 777776665 5678899999999999999999999999999864321 2
Q ss_pred ccccccccccceeEee-ecC---CCEEEEecCCCcEEEEeccCCeeeee-ccCCCCcceeEEEEcCCccEEEeccccccc
Q 031924 73 SDRFVGLSPNSVDALL-KLD---EDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 73 ~~~~~~~~~~~v~~~~-~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
...+.+ |...+.++. +++ +++|++++.|+.|++||+.+++.+.. +..|.. +|.+++|+ ++++|++|+.++.|
T Consensus 188 ~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~-~v~~~~~s-d~~~l~s~~~d~~v 264 (450)
T 2vdu_B 188 QEPILG-HVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH-FVSSICCG-KDYLLLSAGGDDKI 264 (450)
T ss_dssp CCCSEE-CSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS-CEEEEEEC-STTEEEEEESSSEE
T ss_pred ceeeec-ccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC-ceEEEEEC-CCCEEEEEeCCCeE
Confidence 236677 889999988 888 88999999999999999998887766 557877 69999999 99999999988876
Q ss_pred c
Q 031924 148 N 148 (150)
Q Consensus 148 ~ 148 (150)
.
T Consensus 265 ~ 265 (450)
T 2vdu_B 265 F 265 (450)
T ss_dssp E
T ss_pred E
Confidence 4
No 72
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=5.6e-25 Score=150.02 Aligned_cols=146 Identities=11% Similarity=0.086 Sum_probs=125.3
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCC---eeeeeeccCCCcEEEEEEEeCCC-EEEeecCCCeEEEEEcccccccccc
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKN---TVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDR 75 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~ 75 (150)
++|+| ++.++++++.|+.|++||++++ +....+..|...+++++|+|++. .+++|+.||.|++||++..+..+..
T Consensus 237 v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 237 VAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 316 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred eEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE
Confidence 46888 6788999999999999999987 45667778899999999999987 6889999999999999865567778
Q ss_pred cccccccceeEee-ecCC-CEEEEecCCCcEEEEeccC--------------CeeeeeccCCCCcceeEEEEcCCcc-EE
Q 031924 76 FVGLSPNSVDALL-KLDE-DRVITGSENGLISLVGILP--------------NRIIQPIAEHSEYPIESLGIASVLC-FI 138 (150)
Q Consensus 76 ~~~~~~~~v~~~~-~~~~-~~l~~~~~dg~i~~~d~~~--------------~~~~~~~~~~~~~~i~~~~~~~~~~-~l 138 (150)
+.. |...+.++. +|++ .++++++.|+.|++||+.. .+.+..+..|.. +|.+++|+|++. ++
T Consensus 317 ~~~-h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~l 394 (430)
T 2xyi_A 317 FES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA-KISDFSWNPNEPWII 394 (430)
T ss_dssp EEC-CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSS-CEEEEEECSSSTTEE
T ss_pred eec-CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCC-CceEEEECCCCCCEE
Confidence 888 999999988 7777 4799999999999999976 256667777877 699999999999 89
Q ss_pred Eecccccccc
Q 031924 139 NSGFLSLNVN 148 (150)
Q Consensus 139 ~s~~~~~~v~ 148 (150)
++++.++.|.
T Consensus 395 ~s~s~dg~i~ 404 (430)
T 2xyi_A 395 CSVSEDNIMQ 404 (430)
T ss_dssp EEEETTSEEE
T ss_pred EEEECCCCEE
Confidence 9999888764
No 73
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=3.4e-25 Score=150.95 Aligned_cols=145 Identities=10% Similarity=0.100 Sum_probs=118.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe-----------eeeeeccCC------------CcEEEEEEEeCC--CEEEee
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-----------VQTRSEFSE------------EELTSVVLMKNG--RKVVCG 55 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~--~~l~~~ 55 (150)
++|+|++++|++++.||.|++||+.+++ ....+.+|. +.|.+++|+|++ ..|+++
T Consensus 34 v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~ 113 (447)
T 3dw8_B 34 VEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS 113 (447)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence 4799999999999999999999999876 466778887 889999999998 799999
Q ss_pred cCCCeEEEEEccccccc--------------------------------------ccc-cccccccceeEee-ecCCCEE
Q 031924 56 SQSGTVLLYSWGYFKDC--------------------------------------SDR-FVGLSPNSVDALL-KLDEDRV 95 (150)
Q Consensus 56 ~~d~~i~i~~~~~~~~~--------------------------------------~~~-~~~~~~~~v~~~~-~~~~~~l 95 (150)
+.|++|++||+...... ... ..+ |...|.++. ++++++|
T Consensus 114 s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l 192 (447)
T 3dw8_B 114 TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA-HTYHINSISINSDYETY 192 (447)
T ss_dssp ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC-CSSCCCEEEECTTSSEE
T ss_pred CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC-CCcceEEEEEcCCCCEE
Confidence 99999999998632110 012 246 888899988 8899999
Q ss_pred EEecCCCcEEEEeccC-Ceeee-------eccCCCCcceeEEEEcCCc-cEEEecccccccc
Q 031924 96 ITGSENGLISLVGILP-NRIIQ-------PIAEHSEYPIESLGIASVL-CFINSGFLSLNVN 148 (150)
Q Consensus 96 ~~~~~dg~i~~~d~~~-~~~~~-------~~~~~~~~~i~~~~~~~~~-~~l~s~~~~~~v~ 148 (150)
+++ .|+.|++||++. ++.+. .+..|.. .|.+++|+|++ ++|++|+.++.|.
T Consensus 193 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 193 LSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE-VITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp EEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC-CEEEEEECSSCTTEEEEEETTSCEE
T ss_pred EEe-CCCeEEEEECCCCCceeeeeecccccccccCc-ceEEEEECCCCCcEEEEEeCCCeEE
Confidence 998 799999999984 44444 3557777 69999999998 9999999988764
No 74
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.94 E-value=5.7e-25 Score=145.78 Aligned_cols=143 Identities=13% Similarity=0.156 Sum_probs=120.6
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEe---CCCEEEeecCCCeEEEEEcccccccccccc-
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYFKDCSDRFV- 77 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~- 77 (150)
+|+|+++++++++.|+.|++||+++++... ...+...+.+++|+| ++.++++++.||.|++||++. ++....+.
T Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~ 252 (357)
T 3i2n_A 175 AYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT-QHPTKGFAS 252 (357)
T ss_dssp CCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE-EETTTEEEE
T ss_pred ccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC-CCcccceee
Confidence 378999999999999999999999987644 356788999999999 999999999999999999864 34444444
Q ss_pred ----cccccceeEee-ecCCC-EEEEecCCCcEEEEeccCC-------------------eeeeeccCCCCcceeEEEEc
Q 031924 78 ----GLSPNSVDALL-KLDED-RVITGSENGLISLVGILPN-------------------RIIQPIAEHSEYPIESLGIA 132 (150)
Q Consensus 78 ----~~~~~~v~~~~-~~~~~-~l~~~~~dg~i~~~d~~~~-------------------~~~~~~~~~~~~~i~~~~~~ 132 (150)
+ |...+.++. +++++ ++++++.||.|++||++.. +.+..+..|.. +|.+++|+
T Consensus 253 ~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~v~~~~~s 330 (357)
T 3i2n_A 253 VSEKA-HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ-PISSLDWS 330 (357)
T ss_dssp EEEEC-CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS-CEEEEEEC
T ss_pred eccCC-CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC-CeeEEEEc
Confidence 7 889999988 88888 8999999999999999753 35666777877 69999999
Q ss_pred CCccEEE-ecccccccc
Q 031924 133 SVLCFIN-SGFLSLNVN 148 (150)
Q Consensus 133 ~~~~~l~-s~~~~~~v~ 148 (150)
|++++|+ +++.++.|.
T Consensus 331 ~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp SSSTTEEEEEETTSEEE
T ss_pred CCCCeEEEEecCCCcEE
Confidence 9999998 898887764
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=2.6e-25 Score=150.28 Aligned_cols=145 Identities=14% Similarity=0.142 Sum_probs=121.6
Q ss_pred eeecCcceEE-EEcCCCeEEEEEcCCCe----eeeeeccCCCcEEEEEEEe-CCCEEEeecCCCeEEEEEccccc-----
Q 031924 2 TFAADAMKLL-GTSGDGTLSVCNLRKNT----VQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFK----- 70 (150)
Q Consensus 2 ~~~~~~~~l~-~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~----- 70 (150)
+++|+...++ +++.||.|++|++.... ....+.+|.+.|.+++|+| ++++|++++.||+|++||+...+
T Consensus 41 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~ 120 (402)
T 2aq5_A 41 AVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL 120 (402)
T ss_dssp EECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB
T ss_pred EECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc
Confidence 4566655444 46889999999996642 2345678999999999999 89999999999999999986432
Q ss_pred -ccccccccccccceeEee-ecCC-CEEEEecCCCcEEEEeccCCeeeeec--cCCCCcceeEEEEcCCccEEEeccccc
Q 031924 71 -DCSDRFVGLSPNSVDALL-KLDE-DRVITGSENGLISLVGILPNRIIQPI--AEHSEYPIESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 71 -~~~~~~~~~~~~~v~~~~-~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~s~~~~~ 145 (150)
+....+.+ |...|.++. ++++ +++++++.|+.|++||+.+++.+..+ ..|.. .|.+++|+|++++|++++.++
T Consensus 121 ~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 121 REPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD-TIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp CSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS-CEEEEEECTTSSCEEEEETTS
T ss_pred CCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC-ceEEEEECCCCCEEEEEecCC
Confidence 44566778 999999998 7887 69999999999999999999988888 67877 699999999999999999888
Q ss_pred ccc
Q 031924 146 NVN 148 (150)
Q Consensus 146 ~v~ 148 (150)
.|.
T Consensus 199 ~i~ 201 (402)
T 2aq5_A 199 RVR 201 (402)
T ss_dssp EEE
T ss_pred cEE
Confidence 764
No 76
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=5.7e-25 Score=146.09 Aligned_cols=145 Identities=12% Similarity=0.161 Sum_probs=122.4
Q ss_pred CeeecC----cceEEEEcCCCeEEEEEcCCCeeeeeecc-----CCCcEEEEEEEeC----CCEEEeecCCCeEEEEEcc
Q 031924 1 MTFAAD----AMKLLGTSGDGTLSVCNLRKNTVQTRSEF-----SEEELTSVVLMKN----GRKVVCGSQSGTVLLYSWG 67 (150)
Q Consensus 1 i~~~~~----~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~d~~i~i~~~~ 67 (150)
++|+|+ ...+++++.++.|++||+.+++.+..+.. +...+.+++|+|+ +++|++++.||.|++||+.
T Consensus 24 i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~ 103 (366)
T 3k26_A 24 VQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI 103 (366)
T ss_dssp EEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT
T ss_pred EEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch
Confidence 468873 45666666777999999998766544442 5578999999999 6799999999999999986
Q ss_pred cccccccccccccccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeec---cCCCCcceeEEEEcCCccEEEecc
Q 031924 68 YFKDCSDRFVGLSPNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPI---AEHSEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 68 ~~~~~~~~~~~~~~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~s~~ 142 (150)
.++....+.+ |...|.++. ++ +++++++++.||.|++||+++++.+..+ ..|.. +|.+++|+|++++|++++
T Consensus 104 -~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 104 -TMQCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD-EVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp -TCCEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS-CEEEEEECTTSSEEEEEE
T ss_pred -hceEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC-ceeEEEECCCCCEEEEec
Confidence 4567777888 999999998 77 8899999999999999999998888777 57777 699999999999999999
Q ss_pred cccccc
Q 031924 143 LSLNVN 148 (150)
Q Consensus 143 ~~~~v~ 148 (150)
.++.|.
T Consensus 181 ~dg~i~ 186 (366)
T 3k26_A 181 MDHSLK 186 (366)
T ss_dssp TTSCEE
T ss_pred CCCCEE
Confidence 988764
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.94 E-value=1.2e-24 Score=149.26 Aligned_cols=144 Identities=16% Similarity=0.171 Sum_probs=124.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEe--CCCEEEeecCCCeEEEEEccccccc------
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFKDC------ 72 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~~~~~~~~~------ 72 (150)
++|+|++ .+++++.|++|++||+++++....+.+|.+.+.+++|++ ++.++++++.|+.+++||++.....
T Consensus 168 l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 246 (464)
T 3v7d_B 168 LKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 246 (464)
T ss_dssp EEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------
T ss_pred EEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc
Confidence 3677877 899999999999999999999999999999999999995 6789999999999999998643211
Q ss_pred ----------------ccccccccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc
Q 031924 73 ----------------SDRFVGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC 136 (150)
Q Consensus 73 ----------------~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (150)
...+.+ |...+.++ +++++.+++++.|+.|++||+.+++.+..+..|.. +|.+++|+|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~-~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 323 (464)
T 3v7d_B 247 HDYPLVFHTPEENPYFVGVLRG-HMASVRTV-SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD-RIYSTIYDHERK 323 (464)
T ss_dssp CCSSEEESCGGGCTTEEEEECC-CSSCEEEE-EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEEETTTT
T ss_pred CCcceEeeccCCCeEEEEEccC-ccceEEEE-cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC-CEEEEEEcCCCC
Confidence 233455 66777666 67789999999999999999999999999988888 699999999999
Q ss_pred EEEecccccccc
Q 031924 137 FINSGFLSLNVN 148 (150)
Q Consensus 137 ~l~s~~~~~~v~ 148 (150)
++++|+.++.|.
T Consensus 324 ~l~sg~~dg~i~ 335 (464)
T 3v7d_B 324 RCISASMDTTIR 335 (464)
T ss_dssp EEEEEETTSCEE
T ss_pred EEEEEeCCCcEE
Confidence 999999988764
No 78
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.94 E-value=1.1e-24 Score=143.70 Aligned_cols=142 Identities=15% Similarity=0.170 Sum_probs=117.2
Q ss_pred eeecC--cceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccc
Q 031924 2 TFAAD--AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (150)
Q Consensus 2 ~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 79 (150)
+|+++ ..++++++.|+.|++||+++++....+.+|.+.|++++|+|++++|++++.|+.|++||++. .+.+..+..
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~~- 255 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE-GKHLYTLDG- 255 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TEEEEEEEC-
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc-CceeeeecC-
Confidence 45554 45788899999999999999999999999999999999999999999999999999999964 455566654
Q ss_pred cccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeecc---------CCCCcceeEEEEcCCccEEEecccccccc
Q 031924 80 SPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIA---------EHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 80 ~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...+.++. +++ ..+++++.|+.|++||++++..+..+. .|.. .|.+++|+|+|++|++|+.++.|.
T Consensus 256 -~~~v~~~~~~~~-~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 256 -GDIINALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-QCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp -SSCEEEEEECSS-SSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCC-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred -CceEEeeecCCC-CceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCC-CEEEEEECCCCCEEEEEeCCCEEE
Confidence 45677777 555 456667789999999998876655543 4556 599999999999999999998875
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=1.6e-25 Score=148.77 Aligned_cols=143 Identities=13% Similarity=0.097 Sum_probs=122.8
Q ss_pred CeeecC----cceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEe-CCCEEEeecCCCeEEEEEcccccccccc
Q 031924 1 MTFAAD----AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (150)
Q Consensus 1 i~~~~~----~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 75 (150)
++|+|+ +++|++++.|+.|++||+++++.+..+..|...+.+++|+| ++++|++++.||.|++||++. ++....
T Consensus 75 ~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~ 153 (366)
T 3k26_A 75 CAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT-DTLVAI 153 (366)
T ss_dssp EEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT-TEEEEE
T ss_pred EEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec-CeEEEE
Confidence 468888 67999999999999999999999888899999999999999 899999999999999999964 455555
Q ss_pred c---ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccC----------------------------CCC
Q 031924 76 F---VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAE----------------------------HSE 123 (150)
Q Consensus 76 ~---~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----------------------------~~~ 123 (150)
+ .+ |...+.++. +++++.+++++.||.|++||+++++....+.. |..
T Consensus 154 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 154 FGGVEG-HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp ECSTTS-CSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred eccccc-ccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 5 57 889999988 88999999999999999999987665444332 767
Q ss_pred cceeEEEEcCCccEEEecccccccc
Q 031924 124 YPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 124 ~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+|.+++|+ ++++++++.++.|.
T Consensus 233 -~v~~~~~~--~~~l~~~~~d~~i~ 254 (366)
T 3k26_A 233 -YVDCVRWL--GDLILSKSCENAIV 254 (366)
T ss_dssp -CCCEEEEE--TTEEEEECSSSEEE
T ss_pred -eEEEEEEc--CCEEEEEecCCEEE
Confidence 69999999 77999999887664
No 80
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=3.3e-25 Score=151.03 Aligned_cols=145 Identities=10% Similarity=0.147 Sum_probs=118.2
Q ss_pred CeeecCc--ceEEEEcCCCeEEEEEcCCCeee----------------------------------------eeeccCCC
Q 031924 1 MTFAADA--MKLLGTSGDGTLSVCNLRKNTVQ----------------------------------------TRSEFSEE 38 (150)
Q Consensus 1 i~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~----------------------------------------~~~~~~~~ 38 (150)
++|+|++ ..+++++.|+.|++||+..++.. ....+|..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 4789987 78999999999999998764331 11357889
Q ss_pred cEEEEEEEeCCCEEEeecCCCeEEEEEccccccccc-------ccccccccceeEee-ecCC-CEEEEecCCCcEEEEec
Q 031924 39 ELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD-------RFVGLSPNSVDALL-KLDE-DRVITGSENGLISLVGI 109 (150)
Q Consensus 39 ~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~-------~~~~~~~~~v~~~~-~~~~-~~l~~~~~dg~i~~~d~ 109 (150)
.|.+++|+|++++|+++ .|+.|++||++..++... .+.+ |...+.++. +|++ +++++++.||.|++||+
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEE-LTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGG-CCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccc-cCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 99999999999999999 799999999964444433 3567 888999988 8887 89999999999999999
Q ss_pred cCCee----eeeccCCCC-----------cceeEEEEcCCccEEEecccccccc
Q 031924 110 LPNRI----IQPIAEHSE-----------YPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 110 ~~~~~----~~~~~~~~~-----------~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
++++. ...+..|.. .+|.+++|+|+|++|++++. +.|.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~ 309 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVK 309 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEE
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEE
Confidence 98775 667766654 15999999999999999987 6553
No 81
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=2.6e-25 Score=150.16 Aligned_cols=139 Identities=13% Similarity=0.114 Sum_probs=104.7
Q ss_pred CcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCC-CEEEeecCCCeEEEEEccccccccc----------
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSD---------- 74 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~~~~~~~~~~~---------- 74 (150)
|+++|++++.|++|++||++++........|...+.+++|+|++ .+|++++.|++|++||++.......
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 78999999999999999999888887888889999999999986 4799999999999999853210000
Q ss_pred --------------ccccccccceeE------------------------------------------------------
Q 031924 75 --------------RFVGLSPNSVDA------------------------------------------------------ 86 (150)
Q Consensus 75 --------------~~~~~~~~~v~~------------------------------------------------------ 86 (150)
...+ |...+.+
T Consensus 235 ~~~s~~~~~~~~~~~~~~-~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSG-IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp CSEEEESGGGC------C-CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEEC
T ss_pred eEEecccccceeeeeccc-ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc
Confidence 0000 1111100
Q ss_pred --------eee--cCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccc
Q 031924 87 --------LLK--LDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLN 146 (150)
Q Consensus 87 --------~~~--~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~ 146 (150)
+.. .++.++++|+.||.|++||+.+++.......|.. +|.+++|+|||++||+++.++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~-~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGM-PIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSS-CEEEEEECTTSSEEEEEESSEE
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCC-cEEEEEEcCCCCEEEEEeCCCe
Confidence 111 1233567788899999999988887777767777 7999999999999999987764
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=5.5e-25 Score=159.39 Aligned_cols=147 Identities=15% Similarity=0.127 Sum_probs=129.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
++|+|++++|++++.|+.|++||+.+++.+..+..|.+.+.+++|+|++++|++++.||.+++||+.........+.+ |
T Consensus 61 ~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~ 139 (814)
T 3mkq_A 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-H 139 (814)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-C
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-C
Confidence 479999999999999999999999999999889999999999999999999999999999999999754466677777 8
Q ss_pred ccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcC--CccEEEecccccccc
Q 031924 81 PNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIAS--VLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~s~~~~~~v~ 148 (150)
...+.++. +| +++.+++++.||.|++||+.+++....+..+...++..++|+| ++.++++++.++.|.
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 211 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEE
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEE
Confidence 89999988 77 7889999999999999999887766666555533699999999 999999999888764
No 83
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=1.7e-24 Score=155.17 Aligned_cols=145 Identities=21% Similarity=0.246 Sum_probs=122.2
Q ss_pred CeeecC-cceEEEEcCCCeEEEEEcCCC-----eeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccc
Q 031924 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKN-----TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD 74 (150)
Q Consensus 1 i~~~~~-~~~l~~~~~d~~i~i~d~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~ 74 (150)
|+|+|+ +++|++++.|++|++||+.+. .....+.+|...|.+++|+|++++|++|+.|++|++||+. .+....
T Consensus 388 v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~-~~~~~~ 466 (694)
T 3dm0_A 388 IATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA-AGVSTR 466 (694)
T ss_dssp EECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEE
T ss_pred EEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC-CCccee
Confidence 467776 478999999999999999763 3456778999999999999999999999999999999996 456777
Q ss_pred ccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeee---ccCCCCcceeEEEEcCCc--cEEEecccccccc
Q 031924 75 RFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQP---IAEHSEYPIESLGIASVL--CFINSGFLSLNVN 148 (150)
Q Consensus 75 ~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~---~~~~~~~~i~~~~~~~~~--~~l~s~~~~~~v~ 148 (150)
.+.+ |...|.++. +++++.|++++.|+.|++||......... ...|.. .|.+++|+|++ ..+++|+.++.|.
T Consensus 467 ~~~~-h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 467 RFVG-HTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD-WVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp EEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS-CEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred EEeC-CCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC-cEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 8888 999999988 89999999999999999999865543322 235666 59999999987 5899999888764
No 84
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.8e-24 Score=143.53 Aligned_cols=140 Identities=12% Similarity=0.029 Sum_probs=111.9
Q ss_pred eeecCcceEEEEcCCCeEEEEEcC---------CCeeeeeec-cCCCcEEEEEEEe--CCCEEEeecCCCeEEEEEcccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLR---------KNTVQTRSE-FSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYF 69 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~~~~~~ 69 (150)
.|+|+ +++++.|++|++|+.. +++.+.... .|.+.+.+++|+| +++++++++.||++++||++.
T Consensus 83 ~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~- 158 (343)
T 3lrv_A 83 GEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED- 158 (343)
T ss_dssp CCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSS-
T ss_pred eeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC-
Confidence 46666 8899999999999765 444343333 5667899999999 999999999999999999964
Q ss_pred cccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeee-eeccC-CCCcceeEEEEcCCccEEEecccccc
Q 031924 70 KDCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRII-QPIAE-HSEYPIESLGIASVLCFINSGFLSLN 146 (150)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~l~s~~~~~~ 146 (150)
++........+...+.++. +|++.++++|+.||.|++||+++++.+ ..+.. |.. +|.+++|+|++.+|++++.+ .
T Consensus 159 ~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~-~v~~l~fs~~g~~l~s~~~~-~ 236 (343)
T 3lrv_A 159 DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA-KIKEVKFADNGYWMVVECDQ-T 236 (343)
T ss_dssp SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS-CEEEEEECTTSSEEEEEESS-B
T ss_pred CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC-CEEEEEEeCCCCEEEEEeCC-e
Confidence 3444444331555788887 899999999999999999999998876 67777 877 79999999999999999843 4
Q ss_pred c
Q 031924 147 V 147 (150)
Q Consensus 147 v 147 (150)
|
T Consensus 237 v 237 (343)
T 3lrv_A 237 V 237 (343)
T ss_dssp E
T ss_pred E
Confidence 4
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3e-24 Score=142.68 Aligned_cols=145 Identities=12% Similarity=0.131 Sum_probs=123.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCC-----CeEEEEEcccccc----
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFKD---- 71 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~~---- 71 (150)
++|+|++++|++++.|+.|++||+++++.+..+. +...+.+++|+|+++++++++.+ +.+++||+.....
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 80 IDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHEL 158 (369)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceee
Confidence 4789999999999999999999999998887776 77899999999999999999998 9999999864321
Q ss_pred ------ccccccccccc--ceeEee-ecCCCEEEEecCCCcEEEEeccC-CeeeeeccCCCCcceeEEEEcCCccEEEec
Q 031924 72 ------CSDRFVGLSPN--SVDALL-KLDEDRVITGSENGLISLVGILP-NRIIQPIAEHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 72 ------~~~~~~~~~~~--~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
....+.. +.. .+.++. +++++.+++++.||.|++||+++ .+.+..+..|.. +|.+++|+|++++|+++
T Consensus 159 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~ 236 (369)
T 3zwl_B 159 TKVSEEPIHKIIT-HEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK-SISDMQFSPDLTYFITS 236 (369)
T ss_dssp EEECSSCSEEEEC-CTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS-CEEEEEECTTSSEEEEE
T ss_pred cccccceeeeccC-CcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC-ceeEEEECCCCCEEEEe
Confidence 2222333 444 777777 88999999999999999999988 778888888877 69999999999999999
Q ss_pred ccccccc
Q 031924 142 FLSLNVN 148 (150)
Q Consensus 142 ~~~~~v~ 148 (150)
+.++.|.
T Consensus 237 ~~d~~i~ 243 (369)
T 3zwl_B 237 SRDTNSF 243 (369)
T ss_dssp ETTSEEE
T ss_pred cCCceEE
Confidence 9887664
No 86
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.9e-25 Score=149.41 Aligned_cols=142 Identities=7% Similarity=0.126 Sum_probs=120.8
Q ss_pred eecCcceEEEEcCCCeEEEEEcCCCeeeeeecc--CCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccc-cc
Q 031924 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF--SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV-GL 79 (150)
Q Consensus 3 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-~~ 79 (150)
++|+++++++++.|+.|++||+++++.+..+.. |...+.+++|+|++++|++++.||.|++||++. ++....+. .
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~- 255 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-NVLIRSWSFG- 255 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEEBCT-
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-ccEEEEEecC-
Confidence 457899999999999999999999998888887 788999999999999999999999999999974 56666654 5
Q ss_pred cccceeEee-----ecCCCEEEEecCCCcEEEEeccCCeeeeeccC--------------------------CCCcceeE
Q 031924 80 SPNSVDALL-----KLDEDRVITGSENGLISLVGILPNRIIQPIAE--------------------------HSEYPIES 128 (150)
Q Consensus 80 ~~~~v~~~~-----~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~--------------------------~~~~~i~~ 128 (150)
|...|.++. ++++.++++++.||.|++||+++++.+..+.. |.. +|.+
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~v~~ 334 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLN-ALST 334 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGG-GGCC
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCC-ceEE
Confidence 677888873 45678999999999999999998887666643 333 4888
Q ss_pred EEEcCCccEEEecccccccc
Q 031924 129 LGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 129 ~~~~~~~~~l~s~~~~~~v~ 148 (150)
++|+ ++++|++|+.++.|.
T Consensus 335 l~~~-~~~~l~s~~~d~~i~ 353 (437)
T 3gre_A 335 ISVS-NDKILLTDEATSSIV 353 (437)
T ss_dssp EEEE-TTEEEEEEGGGTEEE
T ss_pred EEEC-CceEEEecCCCCeEE
Confidence 9999 789999999988764
No 87
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=3.5e-24 Score=146.12 Aligned_cols=146 Identities=11% Similarity=0.095 Sum_probs=122.3
Q ss_pred CeeecCcc-eEEEEcCCCeEEEEEcCCCee-------eeeeccCCCcEEEEEEEe-CCCEEEeecCCCeEEEEEccccc-
Q 031924 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTV-------QTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFK- 70 (150)
Q Consensus 1 i~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~~- 70 (150)
++|+|+++ +|++++.||.|++||+..+.. ...+..|...+.+++|+| ++..|++++.|+.|++||++...
T Consensus 187 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp EEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred EEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 47899888 999999999999999987321 345668889999999999 68899999999999999997542
Q ss_pred -ccccccccccccceeEee-ecCCC-EEEEecCCCcEEEEeccC-CeeeeeccCCCCcceeEEEEcCCcc-EEEeccccc
Q 031924 71 -DCSDRFVGLSPNSVDALL-KLDED-RVITGSENGLISLVGILP-NRIIQPIAEHSEYPIESLGIASVLC-FINSGFLSL 145 (150)
Q Consensus 71 -~~~~~~~~~~~~~v~~~~-~~~~~-~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~~~ 145 (150)
+....+.. |...+.++. ++++. ++++++.||.|++||++. .+.+..+..|.. +|.+++|+|++. +|++++.++
T Consensus 267 ~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~-~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 267 SKPSHTVDA-HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD-EIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp SSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS-CEEEEEECSSCTTEEEEEETTS
T ss_pred CcceeEeec-CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC-CEEEEEECCCCCCEEEEEeCCC
Confidence 45556667 889999988 77776 788999999999999987 556778878877 699999999985 699998887
Q ss_pred ccc
Q 031924 146 NVN 148 (150)
Q Consensus 146 ~v~ 148 (150)
.|.
T Consensus 345 ~i~ 347 (430)
T 2xyi_A 345 RLH 347 (430)
T ss_dssp CCE
T ss_pred cEE
Confidence 764
No 88
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.4e-24 Score=146.73 Aligned_cols=143 Identities=8% Similarity=0.142 Sum_probs=121.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCC----CeeeeeeccCCCcEEEEEEEeC-CCEEEeecCCCeEEEEEccccc-----
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWGYFK----- 70 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~----- 70 (150)
++|+|++++|++++.|+.|++||+.. .+....+..|...|.+++|+|+ +++|++++.|+.|++||++...
T Consensus 73 ~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 73 LDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp EEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred EEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc
Confidence 47999999999999999999999987 3477788899999999999998 8999999999999999996443
Q ss_pred -c--cccccccccccceeEee-ecC-CCEEEEecCCCcEEEEeccCCeeeeeccCC------CCcceeEEEEcCCc-cEE
Q 031924 71 -D--CSDRFVGLSPNSVDALL-KLD-EDRVITGSENGLISLVGILPNRIIQPIAEH------SEYPIESLGIASVL-CFI 138 (150)
Q Consensus 71 -~--~~~~~~~~~~~~v~~~~-~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------~~~~i~~~~~~~~~-~~l 138 (150)
. ....... |...+.++. +++ +.++++++.|+.|++||+++++.+..+..+ .. ++.+++|+|++ .++
T Consensus 153 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l 230 (416)
T 2pm9_A 153 YTPLTPGQSMS-SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQ-QLSVVEWHPKNSTRV 230 (416)
T ss_dssp CCCBCCCCSCC-SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCC-CEEEEEECSSCTTEE
T ss_pred ccccccccccC-CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCC-ceEEEEECCCCCCEE
Confidence 1 1122346 788898888 777 789999999999999999999888887665 45 69999999997 689
Q ss_pred Eeccccc
Q 031924 139 NSGFLSL 145 (150)
Q Consensus 139 ~s~~~~~ 145 (150)
++++.++
T Consensus 231 ~~~~~d~ 237 (416)
T 2pm9_A 231 ATATGSD 237 (416)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9998876
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8.1e-25 Score=149.07 Aligned_cols=147 Identities=12% Similarity=0.137 Sum_probs=115.4
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCC---Ceee--eeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccc--cccc
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRK---NTVQ--TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY--FKDC 72 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~---~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~--~~~~ 72 (150)
++|+| ++++|++++.|++|++||+.+ +... .....|...|.+++|+|++++|++++.||.|++||++. .++.
T Consensus 69 ~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~ 148 (437)
T 3gre_A 69 SAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESE 148 (437)
T ss_dssp EEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTE
T ss_pred EEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCce
Confidence 47999 999999999999999999876 4311 11125889999999999999999999999999999841 2222
Q ss_pred cccccc---------c--cccceeEee---ecCCCEEEEecCCCcEEEEeccCCeeeeeccC--CCCcceeEEEEcCCcc
Q 031924 73 SDRFVG---------L--SPNSVDALL---KLDEDRVITGSENGLISLVGILPNRIIQPIAE--HSEYPIESLGIASVLC 136 (150)
Q Consensus 73 ~~~~~~---------~--~~~~v~~~~---~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~ 136 (150)
...+.. . +...+.++. .++++++++++.|+.|++||+++++.+..+.. |.. +|.+++|+|+++
T Consensus 149 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~ 227 (437)
T 3gre_A 149 VKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG-AVSSICIDEECC 227 (437)
T ss_dssp EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC-CEEEEEECTTSC
T ss_pred eeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC-ceEEEEECCCCC
Confidence 222221 0 122333333 35788999999999999999999998888876 667 699999999999
Q ss_pred EEEecccccccc
Q 031924 137 FINSGFLSLNVN 148 (150)
Q Consensus 137 ~l~s~~~~~~v~ 148 (150)
+|++|+.++.|.
T Consensus 228 ~l~s~~~dg~i~ 239 (437)
T 3gre_A 228 VLILGTTRGIID 239 (437)
T ss_dssp EEEEEETTSCEE
T ss_pred EEEEEcCCCeEE
Confidence 999999998764
No 90
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.93 E-value=7.1e-24 Score=142.61 Aligned_cols=141 Identities=13% Similarity=0.121 Sum_probs=118.7
Q ss_pred CcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCC-EEEeecCCCeEEEEEccccccccccc--------
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDRF-------- 76 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~-------- 76 (150)
++.++++++.++.|++||+++++....+..|...+.+++|+|+++ .+++++.||.|++||++........+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 556999999999999999999988888899999999999999988 58899999999999996443232222
Q ss_pred -------ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCe-----------------------------------
Q 031924 77 -------VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNR----------------------------------- 113 (150)
Q Consensus 77 -------~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~----------------------------------- 113 (150)
.. |...+.++. +++++++++++.||.|++||+.+++
T Consensus 235 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T 4a11_B 235 QAVESANTA-HNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG 313 (408)
T ss_dssp CCTTTSSCS-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred eeecccccc-ccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence 45 778899888 8899999999999999999986543
Q ss_pred ------------eeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 114 ------------IIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 114 ------------~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.+..+..|.. +|.+++|+|++++|++|+.++.|.
T Consensus 314 ~~i~v~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~dg~i~ 359 (408)
T 4a11_B 314 STIAVYTVYSGEQITMLKGHYK-TVDCCVFQSNFQELYSGSRDCNIL 359 (408)
T ss_dssp TEEEEEETTTCCEEEEECCCSS-CEEEEEEETTTTEEEEEETTSCEE
T ss_pred CEEEEEECcCCcceeeeccCCC-eEEEEEEcCCCCEEEEECCCCeEE
Confidence 3444556777 699999999999999999998774
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.4e-24 Score=144.21 Aligned_cols=143 Identities=17% Similarity=0.218 Sum_probs=127.1
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
+.|+|++ .+++++.++.|++||+++++....+..|...+.+++|+|++++|++++.|+.|++||++ .++....+.. |
T Consensus 212 ~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~-~ 288 (425)
T 1r5m_A 212 VEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG-NGNSQNCFYG-H 288 (425)
T ss_dssp CEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS-SBSCSEEECC-C
T ss_pred EEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC-CCccceEecC-C
Confidence 4577764 57788899999999999998888888999999999999999999999999999999986 4566777777 8
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
...+.++. ++++ .+++++.|+.|++||+.+++.+..+..|.. ++.+++|+|++++|++++.++.|.
T Consensus 289 ~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~~dg~i~ 355 (425)
T 1r5m_A 289 SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV-PIFAGRISQDGQKYAVAFMDGQVN 355 (425)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred CccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc-cEEEEEEcCCCCEEEEEECCCeEE
Confidence 88999888 7777 999999999999999999998888888877 699999999999999999888764
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.6e-24 Score=146.69 Aligned_cols=144 Identities=10% Similarity=0.106 Sum_probs=121.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeee----eeccCCCcEEEEEEEeC---CCEEEeecCCCeEEEEEcccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT----RSEFSEEELTSVVLMKN---GRKVVCGSQSGTVLLYSWGYFKDCS 73 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~i~~~~~~~~~~ 73 (150)
++|+|++++|++++.++.+++|++..++... .+.+|...+.+++|+|+ +++|++++.|+.|++||++. ++..
T Consensus 155 ~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-~~~~ 233 (450)
T 2vdu_B 155 ISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-CFIV 233 (450)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-TTCE
T ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-Ccee
Confidence 4799999999999999999999998876443 66788899999999999 99999999999999999963 4555
Q ss_pred cc-cccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCC------------------------CCccee
Q 031924 74 DR-FVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------------------SEYPIE 127 (150)
Q Consensus 74 ~~-~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------------------------~~~~i~ 127 (150)
.. +.+ |...|.++. + ++++|++++.|+.|++||+.+++.+..+..+ ....+.
T Consensus 234 ~~~~~~-h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 234 DKWLFG-HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp EEECCC-CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred eeeecC-CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 55 457 889999988 7 9999999999999999999998877766421 123589
Q ss_pred EEEEcCCccEEEecc-ccccc
Q 031924 128 SLGIASVLCFINSGF-LSLNV 147 (150)
Q Consensus 128 ~~~~~~~~~~l~s~~-~~~~v 147 (150)
.++|+|+++++++++ .++.|
T Consensus 312 ~i~~~~~~~~l~~~~~~d~~i 332 (450)
T 2vdu_B 312 KIIKSKNLPFVAFFVEATKCI 332 (450)
T ss_dssp EEEECSSSSEEEEEETTCSEE
T ss_pred EEEEeCCCCEEEEEECCCCeE
Confidence 999999999999887 56554
No 93
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.8e-24 Score=150.08 Aligned_cols=136 Identities=15% Similarity=0.098 Sum_probs=109.5
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCC-----cEEEEEEEeCCCEEEeecCCCeEEEEEccccccc---
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE-----ELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC--- 72 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~--- 72 (150)
++|+|+|+.|++++.||.+++||.+. .+..+. |.. .+.+++|+|+|++|++|+.||+|++||+.. +..
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~-~~l~~~ 166 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK-NSENTP 166 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC-CTTTCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC-Cccccc
Confidence 57999999999999999999999544 555555 554 599999999999999999999999999864 332
Q ss_pred ----cccc----ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCee---eeec-cCCCCcceeEEEEcCCccEEE
Q 031924 73 ----SDRF----VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRI---IQPI-AEHSEYPIESLGIASVLCFIN 139 (150)
Q Consensus 73 ----~~~~----~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~---~~~~-~~~~~~~i~~~~~~~~~~~l~ 139 (150)
+.++ .+ |..+|.++. +|+| +++++.|+.|++||+..++. .+.+ ..|.. .|.+++|+ |+.+|
T Consensus 167 ~~i~l~ti~~~~~g-h~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~-~V~svaFs--g~~LA 240 (588)
T 2j04_A 167 EFYFESSIRLSDAG-SKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR-KITDLKIV--DYKVV 240 (588)
T ss_dssp CCEEEEEEECSCTT-CCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS-CCCCEEEE--TTEEE
T ss_pred cceeeeeeeccccc-ccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccC-cEEEEEEE--CCEEE
Confidence 3454 56 778999998 8887 88888999999999987663 3455 36666 59999999 68888
Q ss_pred eccccccc
Q 031924 140 SGFLSLNV 147 (150)
Q Consensus 140 s~~~~~~v 147 (150)
+++. +.|
T Consensus 241 Sa~~-~tI 247 (588)
T 2j04_A 241 LTCP-GYV 247 (588)
T ss_dssp EECS-SEE
T ss_pred EEeC-CeE
Confidence 8873 544
No 94
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.9e-24 Score=154.59 Aligned_cols=146 Identities=12% Similarity=0.136 Sum_probs=125.2
Q ss_pred CeeecC--cceEEEEcCCCeEEEEEcCCCe--eeeeeccCCCcEEEEEEEeC--CCEEEeecCCCeEEEEEccccc-ccc
Q 031924 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCS 73 (150)
Q Consensus 1 i~~~~~--~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~-~~~ 73 (150)
++|+|+ +++|++++.||.|++||+.+++ .......|...+.+++|+|+ ++.+++++.||.|++||++... ...
T Consensus 59 l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 59 VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp EEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC
T ss_pred EEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce
Confidence 468887 8999999999999999999986 56777889999999999999 9999999999999999997442 233
Q ss_pred cccccccccceeEee-ec-------------CCCEEEEecCCCcEEEEeccCC----eeeeeccCCCCcceeEEEEcCC-
Q 031924 74 DRFVGLSPNSVDALL-KL-------------DEDRVITGSENGLISLVGILPN----RIIQPIAEHSEYPIESLGIASV- 134 (150)
Q Consensus 74 ~~~~~~~~~~v~~~~-~~-------------~~~~l~~~~~dg~i~~~d~~~~----~~~~~~~~~~~~~i~~~~~~~~- 134 (150)
..+.+ |...+.++. +| +++.+++++.||.|++||++++ .....+..|.. +|.+++|+|+
T Consensus 139 ~~~~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~-~V~~l~~sp~~ 216 (753)
T 3jro_A 139 IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTV 216 (753)
T ss_dssp EEEEC-CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-CEEEEEECCCC
T ss_pred eEeec-CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC-cEEEEEeccCC
Confidence 44556 888899887 66 4889999999999999999876 45667778888 6999999999
Q ss_pred --ccEEEecccccccc
Q 031924 135 --LCFINSGFLSLNVN 148 (150)
Q Consensus 135 --~~~l~s~~~~~~v~ 148 (150)
+.++++|+.++.|.
T Consensus 217 ~~~~~l~s~s~Dg~I~ 232 (753)
T 3jro_A 217 LLRSYLASVSQDRTCI 232 (753)
T ss_dssp SSSEEEEEEESSSCEE
T ss_pred CCCCEEEEEecCCEEE
Confidence 99999999988764
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.4e-24 Score=158.13 Aligned_cols=142 Identities=15% Similarity=0.060 Sum_probs=120.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccc-------
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCS------- 73 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~------- 73 (150)
++|+| +++|++++.|++|++||+++++.+..+. +.+.|++++|+|+++++++|+.||+|++||++.. +..
T Consensus 64 l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~-~~~~~~i~~~ 140 (902)
T 2oaj_A 64 MRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD-QLSSFKLDNL 140 (902)
T ss_dssp EEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTT-EEEEEEECCH
T ss_pred EEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC-ccccceeccc
Confidence 47899 7899999999999999999998877765 6678999999999999999999999999998643 221
Q ss_pred ----cccccccccceeEee-ecC-CCEEEEecCCCcEEEEeccCCeeeeeccCC------------------CCcceeEE
Q 031924 74 ----DRFVGLSPNSVDALL-KLD-EDRVITGSENGLISLVGILPNRIIQPIAEH------------------SEYPIESL 129 (150)
Q Consensus 74 ----~~~~~~~~~~v~~~~-~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------------------~~~~i~~~ 129 (150)
..+.+ |...|.++. +|+ +..+++++.|+.| +||+++++.++.+..| .. .|.++
T Consensus 141 ~~~~~~~~~-h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~-~V~~v 217 (902)
T 2oaj_A 141 QKSSFFPAA-RLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTP-KVIQS 217 (902)
T ss_dssp HHHHTCSSS-CCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCC-CEEEE
T ss_pred ccccccccc-CCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCC-CeEEE
Confidence 23456 888999988 774 4789999999999 9999999888777554 34 59999
Q ss_pred EEcCCccEEEecccccccc
Q 031924 130 GIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 130 ~~~~~~~~l~s~~~~~~v~ 148 (150)
+|+|+|++|++|+.++.|.
T Consensus 218 ~fspdg~~lasgs~Dg~i~ 236 (902)
T 2oaj_A 218 LYHPNSLHIITIHEDNSLV 236 (902)
T ss_dssp EECTTSSEEEEEETTCCEE
T ss_pred EEcCCCCEEEEEECCCeEE
Confidence 9999999999999988764
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.93 E-value=9.7e-24 Score=137.61 Aligned_cols=142 Identities=15% Similarity=0.095 Sum_probs=123.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc--cccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--DCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~ 78 (150)
++| |++++|++++.||.|++||+.+++....+..|...+.+++|+|+++++++++.|+.+++|++.... +....+.+
T Consensus 24 ~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 102 (313)
T 3odt_A 24 VVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIG 102 (313)
T ss_dssp EEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECC
T ss_pred EEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhh
Confidence 357 889999999999999999999998888888899999999999999999999999999999986432 44566677
Q ss_pred ccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcC-CccEEEecccccccc
Q 031924 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIAS-VLCFINSGFLSLNVN 148 (150)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~~~~~v~ 148 (150)
|...+.++.. +++.+++++.|+.|++|| .++....+..|.. ++.+++|.| ++.++++++.++.|.
T Consensus 103 -~~~~i~~~~~-~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~i~ 168 (313)
T 3odt_A 103 -HQGNVCSLSF-QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA-SVWDAKVVSFSENKFLTASADKTIK 168 (313)
T ss_dssp -CSSCEEEEEE-ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS-CEEEEEEEETTTTEEEEEETTSCEE
T ss_pred -cccCEEEEEe-cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC-ceeEEEEccCCCCEEEEEECCCCEE
Confidence 8888888865 678999999999999999 6677777778877 699999998 999999999988764
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=4.5e-24 Score=141.73 Aligned_cols=110 Identities=13% Similarity=0.168 Sum_probs=93.2
Q ss_pred CeeecC---cceEEEEcCCCeEEEEEcCC-Ceee-eeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccc
Q 031924 1 MTFAAD---AMKLLGTSGDGTLSVCNLRK-NTVQ-TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (150)
Q Consensus 1 i~~~~~---~~~l~~~~~d~~i~i~d~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 75 (150)
++|+|+ +++|++++.|+.|++||+++ ++.. ..+..|...|.+++|+|++++|++++.||.|++||++. ++...
T Consensus 45 ~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~- 122 (368)
T 3mmy_A 45 LSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS-NQAIQ- 122 (368)
T ss_dssp EEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEE-
T ss_pred EEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCC-CCcee-
Confidence 478998 59999999999999999997 5444 67788999999999999999999999999999999863 34333
Q ss_pred cccccccceeEee---ecCCCEEEEecCCCcEEEEeccCCe
Q 031924 76 FVGLSPNSVDALL---KLDEDRVITGSENGLISLVGILPNR 113 (150)
Q Consensus 76 ~~~~~~~~v~~~~---~~~~~~l~~~~~dg~i~~~d~~~~~ 113 (150)
+.. |...+.++. .++++++++++.|+.|++||+++++
T Consensus 123 ~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 123 IAQ-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEE-CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred ecc-ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 456 888898876 4678889999999999999987654
No 98
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=7.8e-24 Score=143.11 Aligned_cols=142 Identities=19% Similarity=0.178 Sum_probs=122.2
Q ss_pred eecCcceEEEEcCCCeEEEEEcCCCeeeeeecc-CCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccc
Q 031924 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (150)
Q Consensus 3 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~ 81 (150)
+++++..+++++.|+.|++||+.+++....... |...|.+++|+|++++|++++.||.|++||+. .++....+.+ |.
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~-~~ 176 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE-SQTKLRTMAG-HQ 176 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-TCCEEEEECC-CS
T ss_pred EeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc-CCeEEEEecC-CC
Confidence 344556788888999999999999987766654 78899999999999999999999999999986 4467777778 99
Q ss_pred cceeEeeecCCCEEEEecCCCcEEEEecc-CCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 82 NSVDALLKLDEDRVITGSENGLISLVGIL-PNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 82 ~~v~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
..+.++.. +++.+++++.||.|++||++ .......+..|.. .|.+++|+|++++|++|+.++.|.
T Consensus 177 ~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 177 ARVGCLSW-NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS-EVCGLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp SCEEEEEE-ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred CceEEEEE-CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC-CeeEEEEcCCCCEEEEEeCCCeEE
Confidence 99988875 57899999999999999998 4567777878888 699999999999999999988764
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=3.7e-24 Score=150.64 Aligned_cols=139 Identities=17% Similarity=0.188 Sum_probs=121.4
Q ss_pred cceEEEEcC-CCeEEEEEcCCCeee-eeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccccce
Q 031924 7 AMKLLGTSG-DGTLSVCNLRKNTVQ-TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (150)
Q Consensus 7 ~~~l~~~~~-d~~i~i~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v 84 (150)
++++++++. |+.|++||+.+++.. ..+..|...+.+++|+|++++|++++.||.|++||+.. ++....+.+.|...+
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~h~~~v 534 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS-REVKTSRWAFRTSKI 534 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEECCSCCCSSCE
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC-CcceeEeecCCCCce
Confidence 678888888 999999999987655 66678889999999999999999999999999999964 455555553378889
Q ss_pred eEee-ec----------CCCEEEEecCCCcEEEEeccCC-eeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 85 DALL-KL----------DEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 85 ~~~~-~~----------~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.++. +| ++++|++++.||.|++||+.++ +.+..+..|.. +|.+++|+|+++ |++++.++.|.
T Consensus 535 ~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~-~v~~l~~s~~~~-l~s~~~d~~v~ 608 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD-GVNNLLWETPST-LVSSGADACIK 608 (615)
T ss_dssp EEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT-CEEEEEEEETTE-EEEEETTSCEE
T ss_pred eEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCcc-ceEEEEEcCCCC-eEEecCCceEE
Confidence 9988 88 8999999999999999999887 78888888988 699999999999 99999988764
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.2e-23 Score=137.24 Aligned_cols=139 Identities=15% Similarity=0.129 Sum_probs=119.0
Q ss_pred eeec-CcceEEEEcCCCeEEEEEcCCCeeeeeecc-CCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccc
Q 031924 2 TFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSEF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (150)
Q Consensus 2 ~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~ 79 (150)
.|.| +++.+++++.|+.|++|| .++....+.. +...+.+++|+|++. +++++.|+.+++||++ .++....+.+
T Consensus 149 ~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~-~~~~~~~~~~- 223 (313)
T 3odt_A 149 KVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMH-TGDVLRTYEG- 223 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETT-TCCEEEEEEC-
T ss_pred EEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECC-chhhhhhhhc-
Confidence 4666 899999999999999999 3445555665 888999999999998 9999999999999996 4577778888
Q ss_pred cccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 80 SPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 80 ~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
|...+.++. ++++ .+++++.||.|++||+.+++.+..+..|.. +|.+++|+|++++ ++++.++.|.
T Consensus 224 ~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~-~~~~~dg~i~ 290 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI-SIWSVDCMSNGDI-IVGSSDNLVR 290 (313)
T ss_dssp CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSS-CEEEEEECTTSCE-EEEETTSCEE
T ss_pred CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCc-eEEEEEEccCCCE-EEEeCCCcEE
Confidence 999999988 7777 688999999999999999999999888877 6999999999994 5577777664
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.92 E-value=2.3e-24 Score=142.83 Aligned_cols=143 Identities=15% Similarity=0.140 Sum_probs=116.8
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCe-eeeeeccCCC----cEEEEE----EEeCCCEEEeecCCCeEEEEEccccccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNT-VQTRSEFSEE----ELTSVV----LMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~~~~~d~~i~i~~~~~~~~~ 72 (150)
+|+|++++|++++.|+.|++||+++++ ....+..+.+ .+.+++ |+|+++++++++.|+.|++||++.. +.
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~ 202 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM-AL 202 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT-EE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC-ce
Confidence 578999999999999999999999876 5666655443 788888 6789999999999999999999643 33
Q ss_pred ccccccccccceeEee-ec---CCCEEEEecCCCcEEEEeccCCeeeeecc-----CCCCcceeEEEEcCCcc-EEEecc
Q 031924 73 SDRFVGLSPNSVDALL-KL---DEDRVITGSENGLISLVGILPNRIIQPIA-----EHSEYPIESLGIASVLC-FINSGF 142 (150)
Q Consensus 73 ~~~~~~~~~~~v~~~~-~~---~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~-~l~s~~ 142 (150)
. .... |...+.++. ++ +++.+++++.||.|++||+++++....+. .|.. +|.+++|+|+++ ++++|+
T Consensus 203 ~-~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~ 279 (357)
T 3i2n_A 203 R-WETN-IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKS-TVWQVRHLPQNRELFLTAG 279 (357)
T ss_dssp E-EEEE-CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSS-CEEEEEEETTEEEEEEEEE
T ss_pred e-eecC-CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcC-CEEEEEECCCCCcEEEEEe
Confidence 2 3345 788899888 77 89999999999999999998776555443 7777 699999999998 899999
Q ss_pred cccccc
Q 031924 143 LSLNVN 148 (150)
Q Consensus 143 ~~~~v~ 148 (150)
.++.|.
T Consensus 280 ~dg~i~ 285 (357)
T 3i2n_A 280 GAGGLH 285 (357)
T ss_dssp TTSEEE
T ss_pred CCCcEE
Confidence 988764
No 102
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=1.5e-23 Score=147.51 Aligned_cols=147 Identities=12% Similarity=0.155 Sum_probs=119.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCC----eeeeeeccCCCc-EEEEEEEe--CCCEEEeecCCCeEEEEEcccc----
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKN----TVQTRSEFSEEE-LTSVVLMK--NGRKVVCGSQSGTVLLYSWGYF---- 69 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~d~~i~i~~~~~~---- 69 (150)
++|+|++++|++++ ++.|.+||++++ +....+.+|... |.+++|+| ++++|++++.||.|++||+...
T Consensus 24 ~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 102 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN 102 (615)
T ss_dssp CEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGT
T ss_pred EEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccc
Confidence 58999999999997 789999999988 788889999999 99999999 9999999999999999998421
Q ss_pred ---ccccccccc-------------------------------------------ccccceeEee-ecCCC-EEEEecCC
Q 031924 70 ---KDCSDRFVG-------------------------------------------LSPNSVDALL-KLDED-RVITGSEN 101 (150)
Q Consensus 70 ---~~~~~~~~~-------------------------------------------~~~~~v~~~~-~~~~~-~l~~~~~d 101 (150)
.+....+.. .|...+.++. +++++ .+++++.|
T Consensus 103 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 182 (615)
T 1pgu_A 103 SVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 182 (615)
T ss_dssp EEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETT
T ss_pred cccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCC
Confidence 122233332 0334445544 45554 78888899
Q ss_pred CcEEEEeccCCeeeeeccCCCCc--ceeEEEEcCC-ccEEEecccccccc
Q 031924 102 GLISLVGILPNRIIQPIAEHSEY--PIESLGIASV-LCFINSGFLSLNVN 148 (150)
Q Consensus 102 g~i~~~d~~~~~~~~~~~~~~~~--~i~~~~~~~~-~~~l~s~~~~~~v~ 148 (150)
+.|++||+.+++.+..+..|... +|.+++|+|+ ++++++++.++.|.
T Consensus 183 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 183 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 232 (615)
T ss_dssp TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEE
T ss_pred CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEE
Confidence 99999999999998888877661 3999999999 99999999888764
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.7e-24 Score=155.39 Aligned_cols=146 Identities=16% Similarity=0.090 Sum_probs=124.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcC--CCeeeeeeccCCCcEEEEEEEeC--CCEEEeecCCCeEEEEEccccc-ccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLR--KNTVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~-~~~~~ 75 (150)
++|+|+++++++++.||.|++||+. +++....+.+|.+.|.+++|+|+ +++|++++.||.|++||+.... .....
T Consensus 15 l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~ 94 (753)
T 3jro_A 15 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 94 (753)
T ss_dssp ECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccc
Confidence 4789999999999999999999998 44567788899999999999988 9999999999999999986432 25566
Q ss_pred cccccccceeEee-ecC--CCEEEEecCCCcEEEEeccCCe--eeeeccCCCCcceeEEEEcC-------------CccE
Q 031924 76 FVGLSPNSVDALL-KLD--EDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLGIAS-------------VLCF 137 (150)
Q Consensus 76 ~~~~~~~~v~~~~-~~~--~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~-------------~~~~ 137 (150)
+.+ |...|.++. +|+ ++.+++++.||.|++||++.+. ....+..|.. +|.+++|+| ++.+
T Consensus 95 ~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~-~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 95 HAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp ECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS-CEEEEEECCCC---------CGGGCC
T ss_pred ccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC-ceEEEEecCcccccccccccCCCCCE
Confidence 677 899999988 777 8999999999999999998763 3344557777 699999999 5999
Q ss_pred EEecccccccc
Q 031924 138 INSGFLSLNVN 148 (150)
Q Consensus 138 l~s~~~~~~v~ 148 (150)
+++|+.++.|.
T Consensus 173 l~sgs~dg~I~ 183 (753)
T 3jro_A 173 FVTGGADNLVK 183 (753)
T ss_dssp EEEEETTSCEE
T ss_pred EEEEECCCeEE
Confidence 99999988764
No 104
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=4.6e-24 Score=143.43 Aligned_cols=145 Identities=12% Similarity=0.118 Sum_probs=120.5
Q ss_pred CeeecC----c---ceEEEEcCCCeEEEEEcCCCee-----eeeeccC-----CCcEEEEEEE----eCCCE-EEeecCC
Q 031924 1 MTFAAD----A---MKLLGTSGDGTLSVCNLRKNTV-----QTRSEFS-----EEELTSVVLM----KNGRK-VVCGSQS 58 (150)
Q Consensus 1 i~~~~~----~---~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d 58 (150)
++|+|+ + ++|++++.|+.|++||+.+++. ...+..| ...+.+++|+ |+++. |++++.|
T Consensus 68 ~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d 147 (397)
T 1sq9_A 68 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK 147 (397)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT
T ss_pred EEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC
Confidence 468888 8 9999999999999999998875 7777777 4899999999 99999 9999999
Q ss_pred CeEEEEEcccc-----ccccc-----cc-------ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccC
Q 031924 59 GTVLLYSWGYF-----KDCSD-----RF-------VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAE 120 (150)
Q Consensus 59 ~~i~i~~~~~~-----~~~~~-----~~-------~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 120 (150)
|.|++||++.. ++... .+ .. |...+.++. ++++ .+++++.|+.|++||+++++.+..+..
T Consensus 148 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 148 GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT-PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFES 225 (397)
T ss_dssp SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS-SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEeCCccccccccceeeccCcceeeeeeccccC-CCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEec
Confidence 99999999740 33443 44 34 677888887 8888 999999999999999999998888877
Q ss_pred ---C---CCcceeEEEEcCCccEEEecccc---cccc
Q 031924 121 ---H---SEYPIESLGIASVLCFINSGFLS---LNVN 148 (150)
Q Consensus 121 ---~---~~~~i~~~~~~~~~~~l~s~~~~---~~v~ 148 (150)
| .. +|.+++|+|++++|++++.+ +.|.
T Consensus 226 ~~~h~~~~~-~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 226 QHSMINNSN-SIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp CC---CCCC-CEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred cccccccCC-ccceEEECCCCCEEEEEecCCCCceEE
Confidence 7 77 69999999999999999988 6654
No 105
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=2.3e-23 Score=141.64 Aligned_cols=142 Identities=18% Similarity=0.176 Sum_probs=119.9
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeee--ccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRS--EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
|+|+++ +.|++| .|++|++||..+++....+ ..|...|++++|+|+|++|++|+.||+|++||+. .++.+..+.+
T Consensus 111 l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~-~~~~~~~~~~ 187 (420)
T 4gga_A 111 VDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-QQKRLRNMTS 187 (420)
T ss_dssp EEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEECC
T ss_pred EEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC-CCcEEEEEeC
Confidence 468865 577776 5899999999999876554 4667789999999999999999999999999996 4577788888
Q ss_pred ccccceeEeeecCCCEEEEecCCCcEEEEeccCC-eeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
|...+.++. .++..+++++.|+.+++||.... ..+..+..|.. .+..+.++|+++++++++.++.+.
T Consensus 188 -h~~~v~~~s-~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~-~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 188 -HSARVGSLS-WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp -CSSCEEEEE-EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEE
T ss_pred -CCCceEEEe-eCCCEEEEEeCCCceeEeeecccceeeEEeccccc-ceeeeeecCCCCeeeeeeccccce
Confidence 988887764 46789999999999999998764 45677778888 599999999999999999887764
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=1.5e-23 Score=142.57 Aligned_cols=143 Identities=11% Similarity=0.114 Sum_probs=117.9
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCe----eeeeeccCCCcEEEEEEEeCCC-EEEe--ecCCCeEEEEEccccccccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNT----VQTRSEFSEEELTSVVLMKNGR-KVVC--GSQSGTVLLYSWGYFKDCSD 74 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~d~~i~i~~~~~~~~~~~ 74 (150)
.|+|+++++++++.|+.+++|+...++ .+.....|...|.+++|+|.+. .+++ |+.|++|++||+. .++...
T Consensus 237 ~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~-t~~~~~ 315 (420)
T 4gga_A 237 RWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC-SGACLS 315 (420)
T ss_dssp EECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT-TTEEEE
T ss_pred eecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC-ccccce
Confidence 578999999999999999999998765 2455677888999999999754 4444 5689999999996 446666
Q ss_pred ccccccccceeEee-ecCCCEEEEec--CCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 75 RFVGLSPNSVDALL-KLDEDRVITGS--ENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 75 ~~~~~~~~~v~~~~-~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.+.. +. .+.++. .++++.+++++ .|+.|++||+.+++.+..+.+|.+ +|.+++|+|||++|+||+.++.|.
T Consensus 316 ~~~~-~~-~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~-~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 316 AVDA-HS-QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTS-RVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp EEEC-SS-CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSCEEEEETTTEEE
T ss_pred eecc-cc-ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEecCCeEE
Confidence 6665 44 455554 88888877654 789999999999999999999988 699999999999999999998764
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=2.5e-23 Score=138.81 Aligned_cols=144 Identities=9% Similarity=0.024 Sum_probs=114.8
Q ss_pred eeecCcceE-EEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCC-------------------------------
Q 031924 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG------------------------------- 49 (150)
Q Consensus 2 ~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~------------------------------- 49 (150)
++.++++.+ ++++.|++|++||..+++.+..+. +...+.+++++++.
T Consensus 65 ~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 143 (355)
T 3vu4_A 65 RMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVC 143 (355)
T ss_dssp EECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEE
T ss_pred EEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceE
Confidence 456666666 456788999999999998877665 45678888877642
Q ss_pred ----CEEEe--ecCCCeEEEEEccccc--------------c-cccccccccccceeEee-ecCCCEEEEecCCCc-EEE
Q 031924 50 ----RKVVC--GSQSGTVLLYSWGYFK--------------D-CSDRFVGLSPNSVDALL-KLDEDRVITGSENGL-ISL 106 (150)
Q Consensus 50 ----~~l~~--~~~d~~i~i~~~~~~~--------------~-~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~-i~~ 106 (150)
..++. |+.||.|++||++... . ....+.+ |...|.++. +|++++|++++.|++ |++
T Consensus 144 ~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 144 EFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQDGTIIRV 222 (355)
T ss_dssp EEETTEEEEEESSCTTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred EEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence 23333 6788999999986422 0 1566778 999999998 899999999999998 999
Q ss_pred EeccCCeeeeecc-C-CCCcceeEEEEcCCccEEEecccccccc
Q 031924 107 VGILPNRIIQPIA-E-HSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 107 ~d~~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
||+++++.+..+. . |.. +|.+++|+|++++|++++.++.|.
T Consensus 223 wd~~~~~~~~~~~~g~h~~-~v~~~~~s~~~~~l~s~s~d~~v~ 265 (355)
T 3vu4_A 223 FKTEDGVLVREFRRGLDRA-DVVDMKWSTDGSKLAVVSDKWTLH 265 (355)
T ss_dssp EETTTCCEEEEEECTTCCS-CEEEEEECTTSCEEEEEETTCEEE
T ss_pred EECCCCcEEEEEEcCCCCC-cEEEEEECCCCCEEEEEECCCEEE
Confidence 9999999988886 4 777 699999999999999999987764
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.8e-23 Score=145.07 Aligned_cols=140 Identities=13% Similarity=0.130 Sum_probs=113.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCee-------eeee----ccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV-------QTRS----EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~ 69 (150)
++|||||++|++++.||+|++||+.+++. +..+ .+|.+.|.+++|+|+| +++++.|+++++||+...
T Consensus 135 vafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 135 FEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp EEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSS
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCC
Confidence 57999999999999999999999998752 4554 5677899999999999 888889999999998633
Q ss_pred cc--cccccc-cccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEE--cCCccEEEecccc
Q 031924 70 KD--CSDRFV-GLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGI--ASVLCFINSGFLS 144 (150)
Q Consensus 70 ~~--~~~~~~-~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~s~~~~ 144 (150)
.. ..+++. + |...|.++... ++.+++++ ++.|++||+.+++......+|.. .+..++| +|++..+++++.+
T Consensus 213 ~~~~~~~tL~~~-h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~-~V~~va~~~s~d~~~La~a~ed 288 (588)
T 2j04_A 213 SHQPVSRMIQNA-SRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLE-NFHIIPLNHEKESTILLMSNKT 288 (588)
T ss_dssp SSCCCEEEEECC-CSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCS-CCCEEEETTCSSCEEEEECSSC
T ss_pred ccccceeeeccc-ccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCc-eEEEEEeeeCCCCCEEEEEcCC
Confidence 21 123453 5 77888888744 68888887 69999999988877333336877 6999999 9999999999977
Q ss_pred cc
Q 031924 145 LN 146 (150)
Q Consensus 145 ~~ 146 (150)
+.
T Consensus 289 G~ 290 (588)
T 2j04_A 289 SY 290 (588)
T ss_dssp EE
T ss_pred CC
Confidence 75
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.92 E-value=3.5e-23 Score=136.64 Aligned_cols=140 Identities=12% Similarity=0.103 Sum_probs=118.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCC-Ce--eeeeeccCCCcEEEEEEEe-CCCEEEeecCCCeEEEEEcccc-----cc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRK-NT--VQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYF-----KD 71 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~-~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~~~~~~-----~~ 71 (150)
++|+|++ +++++.|+.|++||+++ ++ .......+...+.+++|+| +++++++++.||.+++|+++.. .+
T Consensus 156 ~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp EEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred EEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence 3577776 88899999999999988 54 2334456778999999999 9999999999999999998654 25
Q ss_pred ccccccccccc---------ceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCC-CCcceeEEEEcCCccEEEe
Q 031924 72 CSDRFVGLSPN---------SVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEH-SEYPIESLGIASVLCFINS 140 (150)
Q Consensus 72 ~~~~~~~~~~~---------~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s 140 (150)
....+.. |.. .+.++. ++++++|++++.||.|++||+.+++.+..+..| .. +|.+++ |++++|++
T Consensus 234 ~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~-~v~~~~--~~~~~l~s 309 (342)
T 1yfq_A 234 KRFAFRC-HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED-SVVKIA--CSDNILCL 309 (342)
T ss_dssp TCEEEEC-CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSS-EEEEEE--ECSSEEEE
T ss_pred cceeeec-ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCC-CceEec--CCCCeEEE
Confidence 5566666 654 888887 889999999999999999999999999999887 77 699999 99999999
Q ss_pred cccccc
Q 031924 141 GFLSLN 146 (150)
Q Consensus 141 ~~~~~~ 146 (150)
|+.++.
T Consensus 310 ~s~Dg~ 315 (342)
T 1yfq_A 310 ATSDDT 315 (342)
T ss_dssp EEECTH
T ss_pred EecCCc
Confidence 998876
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=1e-23 Score=142.45 Aligned_cols=143 Identities=10% Similarity=-0.023 Sum_probs=112.2
Q ss_pred eecCcceEEEEcCCCeEEEEEcCCCeee-----eeeccCCCcEEEEEEEe--------CCCEEEeecCCCeEEEEEcccc
Q 031924 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQ-----TRSEFSEEELTSVVLMK--------NGRKVVCGSQSGTVLLYSWGYF 69 (150)
Q Consensus 3 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~i~~~~~~ 69 (150)
++++++++++++.|++|++||.+.++.. ..+.+|.+.|++++|+| ++++|++++.|++|++||++..
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 4557788999999999999999987543 34678999999999998 7899999999999999999644
Q ss_pred cccccccccccccceeEee-ecCC-CEEEEecCCCcEEEEeccCCeeeeec-------------------------cCCC
Q 031924 70 KDCSDRFVGLSPNSVDALL-KLDE-DRVITGSENGLISLVGILPNRIIQPI-------------------------AEHS 122 (150)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~~-~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~-------------------------~~~~ 122 (150)
.....+.. |...+.++. +|++ ++|++++.|+.|++||+++++..... ..|.
T Consensus 177 -~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 177 -GPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp -EEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred -ceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 44444556 778888887 7766 58999999999999999876533221 2344
Q ss_pred CcceeEEEEc-CCccEEEecccccccc
Q 031924 123 EYPIESLGIA-SVLCFINSGFLSLNVN 148 (150)
Q Consensus 123 ~~~i~~~~~~-~~~~~l~s~~~~~~v~ 148 (150)
. .+.++.|+ |+++.+++++.++.+.
T Consensus 255 ~-~v~~v~~~~~dg~~l~s~s~d~~i~ 280 (393)
T 4gq1_A 255 S-SLANVRWIGSDGSGILAMCKSGAWL 280 (393)
T ss_dssp S-SCSEEEEETTTTCEEEEECTTSEEE
T ss_pred c-cceeeeeecCCCCEEEEEeCCCCEE
Confidence 4 48888886 7999999999887653
No 111
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=4.3e-23 Score=141.52 Aligned_cols=141 Identities=13% Similarity=0.069 Sum_probs=121.9
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~ 81 (150)
+++++++++++++.|+.|++||+.+++.+..+.+|...+.+++|+|+++++++++.||.|++||++ .++....+.+ |.
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~-h~ 352 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE-NGELMYTLQG-HT 352 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT-TTEEEEEECC-CS
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCcEEEEEeC-CC
Confidence 356788999999999999999999999999999999999999999999999999999999999986 4577888888 99
Q ss_pred cceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 82 NSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 82 ~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
..+.++.. +++.+++++.||.|++||+.+.+..... .+.. .+..++|+|+++++++|+ ++.|.
T Consensus 353 ~~v~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~-dg~i~ 415 (464)
T 3v7d_B 353 ALVGLLRL-SDKFLVSAAADGSIRGWDANDYSRKFSY-HHTN-LSAITTFYVSDNILVSGS-ENQFN 415 (464)
T ss_dssp SCEEEEEE-CSSEEEEEETTSEEEEEETTTCCEEEEE-ECTT-CCCEEEEEECSSEEEEEE-TTEEE
T ss_pred CcEEEEEE-cCCEEEEEeCCCcEEEEECCCCceeeee-cCCC-CccEEEEEeCCCEEEEec-CCeEE
Confidence 99988863 3689999999999999999887655554 3444 588899999999999988 66553
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=2.6e-23 Score=139.88 Aligned_cols=144 Identities=12% Similarity=0.143 Sum_probs=119.1
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCCeeeeee-------------ccCCCcEEEEEEEe-CCCEEEeecCCCeEEEEE
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRS-------------EFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYS 65 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~-------------~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~~ 65 (150)
++|+| ++++|++++.||.|++||+.+++..... ..|...|.+++|+| ++..|++++.||.|++||
T Consensus 49 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 128 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWD 128 (408)
T ss_dssp EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEee
Confidence 47999 9999999999999999999987644332 24888999999999 788999999999999999
Q ss_pred cccccccccccccccccceeEee-ec---CCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc-EEEe
Q 031924 66 WGYFKDCSDRFVGLSPNSVDALL-KL---DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC-FINS 140 (150)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~v~~~~-~~---~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s 140 (150)
+.. ++....+. +...+.++. .+ ++.++++++.|+.|++||+++++.+..+..|.. +|.+++|+|++. ++++
T Consensus 129 ~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ll~~ 204 (408)
T 4a11_B 129 TNT-LQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ-EILAVSWSPRYDYILAT 204 (408)
T ss_dssp TTT-TEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS-CEEEEEECSSCTTEEEE
T ss_pred CCC-Cccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC-cEEEEEECCCCCcEEEE
Confidence 863 35544443 455566655 44 556999999999999999999988888888888 699999999998 5889
Q ss_pred cccccccc
Q 031924 141 GFLSLNVN 148 (150)
Q Consensus 141 ~~~~~~v~ 148 (150)
|+.++.|.
T Consensus 205 ~~~dg~i~ 212 (408)
T 4a11_B 205 ASADSRVK 212 (408)
T ss_dssp EETTSCEE
T ss_pred EcCCCcEE
Confidence 99888764
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.91 E-value=1.9e-23 Score=137.89 Aligned_cols=141 Identities=18% Similarity=0.177 Sum_probs=116.1
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe---eeeeeccCCCcEEEEEEEeCCC-EEEeecCCCeEEEEEc-ccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT---VQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSW-GYFKDCSDR 75 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~~~-~~~~~~~~~ 75 (150)
++|+|++++|++++.|+.|++||+..++ .......|...+.+++|+|+++ +|++++.||.|++||+ ... +. ..
T Consensus 17 ~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~-~~ 94 (342)
T 1yfq_A 17 IKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP-SF-QA 94 (342)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS-SE-EE
T ss_pred EEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC-ce-Ee
Confidence 4799999999999999999999998876 3445568889999999999999 9999999999999998 633 22 22
Q ss_pred cccc-cccceeEee-ecCCCEEEEecCCCcEEEEeccC---------CeeeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 76 FVGL-SPNSVDALL-KLDEDRVITGSENGLISLVGILP---------NRIIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 76 ~~~~-~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
+.+. |...|.++. ++ ++.+++++.|+.|++||+++ ++.+..+. |.. .+.+++|+|++ +++++.+
T Consensus 95 ~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~-~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 95 LTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKN-KIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp CBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCC-CEEEEEECSSE--EEEEEST
T ss_pred ccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCC-ceEEEEecCCc--EEEEeCC
Confidence 2210 677888887 77 99999999999999999987 77677775 666 69999999998 7777777
Q ss_pred cccc
Q 031924 145 LNVN 148 (150)
Q Consensus 145 ~~v~ 148 (150)
+.|.
T Consensus 170 ~~i~ 173 (342)
T 1yfq_A 170 SQVQ 173 (342)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 6553
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=3.8e-23 Score=155.53 Aligned_cols=145 Identities=16% Similarity=0.215 Sum_probs=123.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEe--CCCEEEeecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
++|+|+++++++++.|+.|++||+.+++.+..+..|...+.+++|+| ++..+++++.|+.|++||++ .++....+.+
T Consensus 663 ~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~-~~~~~~~~~~ 741 (1249)
T 3sfz_A 663 CAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN-QKECRNTMFG 741 (1249)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETT-SSSEEEEECC
T ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECC-CcchhheecC
Confidence 47999999999999999999999999999999999999999999999 56689999999999999996 4577777888
Q ss_pred ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeecc--------------------------------------
Q 031924 79 LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIA-------------------------------------- 119 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-------------------------------------- 119 (150)
|...|.++. +++++.+++++.||.|++||+.+++....+.
T Consensus 742 -h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~ 820 (1249)
T 3sfz_A 742 -HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNK 820 (1249)
T ss_dssp -CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTE
T ss_pred -CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCc
Confidence 999999988 8899999999999999999997765433321
Q ss_pred -----------------CCCCcceeEEEEcCCccEEEecccccccc
Q 031924 120 -----------------EHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 120 -----------------~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.|.. ++.+++|+|+++++++++.++.|.
T Consensus 821 v~~~d~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~dg~v~ 865 (1249)
T 3sfz_A 821 VLLFDIHTSGLLAEIHTGHHS-TIQYCDFSPYDHLAVIALSQYCVE 865 (1249)
T ss_dssp EEEEETTTCCEEEEEECSSSS-CCCEEEECSSTTEEEEECSSSCEE
T ss_pred EEEEEecCCCceeEEcCCCCC-ceEEEEEcCCCCEEEEEeCCCeEE
Confidence 3334 477888888888888888776653
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.91 E-value=6.3e-23 Score=136.92 Aligned_cols=140 Identities=13% Similarity=0.071 Sum_probs=109.0
Q ss_pred ceEEE--EcCCCeEEEEEcCCCe----------------eeeeeccCCCcEEEEEEEeCCCEEEeecCCCe-EEEEEccc
Q 031924 8 MKLLG--TSGDGTLSVCNLRKNT----------------VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGT-VLLYSWGY 68 (150)
Q Consensus 8 ~~l~~--~~~d~~i~i~d~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~~~~~ 68 (150)
++++. ++.+|.|++||+.+++ .+..+.+|.+.|.+++|+|+|++|++++.|++ |++||++
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~- 226 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE- 226 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT-
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC-
Confidence 45555 5789999999999865 16678899999999999999999999999998 9999996
Q ss_pred ccccccccc-cccccceeEee-ecCCCEEEEecCCCcEEEEeccCCee--eeec--------------------cCCCCc
Q 031924 69 FKDCSDRFV-GLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRI--IQPI--------------------AEHSEY 124 (150)
Q Consensus 69 ~~~~~~~~~-~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~--------------------~~~~~~ 124 (150)
.++.+..+. +.|...|.++. +|++++|++++.|+.|++||+..... ...+ ......
T Consensus 227 ~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (355)
T 3vu4_A 227 DGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHV 306 (355)
T ss_dssp TCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTC
T ss_pred CCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCC
Confidence 456667776 22788899988 89999999999999999999965421 1111 111111
Q ss_pred ceeEEEEcCCccEEEecccccccc
Q 031924 125 PIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 125 ~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+...++|+++++++++++.++.+.
T Consensus 307 ~~~~~a~~~d~~~l~~~~~dg~~~ 330 (355)
T 3vu4_A 307 RGCKIAWISESSLVVVWPHTRMIE 330 (355)
T ss_dssp CCCEEEESSSSEEEEEETTTTEEE
T ss_pred CceEEEEeCCCCEEEEEeCCCeEE
Confidence 246789999999999999887654
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.91 E-value=1.4e-22 Score=138.59 Aligned_cols=139 Identities=16% Similarity=0.203 Sum_probs=121.4
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~ 81 (150)
+++++++++++++.||.|++||+.+++.+..+.+|...|.+++|+ ++.+++++.||+|++||+. .++....+.+ |.
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~-h~ 199 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE-TGECIHTLYG-HT 199 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT-TTEEEEEECC-CS
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC-cCcEEEEECC-CC
Confidence 456788999999999999999999999999999999999999997 6799999999999999986 4577777888 88
Q ss_pred cceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 82 NSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 82 ~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
..+.++.. +++.+++++.||.|++||+.+++.+..+..|.. ++.+++| ++.++++|+.++.|.
T Consensus 200 ~~v~~~~~-~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~dg~i~ 262 (445)
T 2ovr_B 200 STVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA-AVRCVQY--DGRRVVSGAYDFMVK 262 (445)
T ss_dssp SCEEEEEE-ETTEEEEEETTSEEEEEESSSCCEEEEEECCSS-CEEEEEE--CSSCEEEEETTSCEE
T ss_pred CcEEEEEe-cCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc-cEEEEEE--CCCEEEEEcCCCEEE
Confidence 88888764 467899999999999999999988888888877 6999988 788899999887764
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=1.2e-22 Score=138.63 Aligned_cols=137 Identities=20% Similarity=0.254 Sum_probs=120.7
Q ss_pred ecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccccc
Q 031924 4 AADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNS 83 (150)
Q Consensus 4 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~ 83 (150)
..+++++++++.|+.|++||+++++.+..+..|...+.++.+ +++.+++|+.||.|++||++ .++....+.+ |...
T Consensus 263 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~-h~~~ 338 (435)
T 1p22_A 263 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIE-CGACLRVLEG-HEEL 338 (435)
T ss_dssp EEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETT-TCCEEEEECC-CSSC
T ss_pred EeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC-CCCEEEEEeC-CcCc
Confidence 347889999999999999999999999999999999999988 47899999999999999996 4577788888 9999
Q ss_pred eeEeeecCCCEEEEecCCCcEEEEeccCCe---------eeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 84 VDALLKLDEDRVITGSENGLISLVGILPNR---------IIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 84 v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+.++.. +++.+++|+.||.|++||+.+++ .+..+..|.. +|.+++| ++.+|++|+.++.|.
T Consensus 339 v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~--~~~~l~s~s~Dg~i~ 408 (435)
T 1p22_A 339 VRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-RVFRLQF--DEFQIVSSSHDDTIL 408 (435)
T ss_dssp EEEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS-CCCCEEE--CSSCEEECCSSSEEE
T ss_pred EEEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC-CeEEEEe--CCCEEEEEeCCCEEE
Confidence 988865 78999999999999999997655 6778888888 6999999 788999999988774
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=3.5e-22 Score=136.30 Aligned_cols=139 Identities=13% Similarity=0.140 Sum_probs=120.5
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~ 81 (150)
++.++++++++++.||.|++||+.+++....+.+|...|.+++| +++.+++|+.||.|++||+. .++....+.+ |.
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~-h~ 213 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN-TGEMLNTLIH-HC 213 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS-SCCEEEEECC-CC
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC-CCcEEEEEcC-CC
Confidence 45678999999999999999999999999999999999999998 78999999999999999986 4577778888 99
Q ss_pred cceeEeeecCCCEEEEecCCCcEEEEeccCCeee---eeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 82 NSVDALLKLDEDRVITGSENGLISLVGILPNRII---QPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 82 ~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
..+.++.. +++.+++++.||.|++||+.+++.. ..+..|.. +|.+++| +++++++|+.++.|.
T Consensus 214 ~~v~~l~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 214 EAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVVDF--DDKYIVSASGDRTIK 279 (435)
T ss_dssp SCEEEEEC-CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS-CEEEEEE--ETTEEEEEETTSEEE
T ss_pred CcEEEEEE-cCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC-cEEEEEe--CCCEEEEEeCCCeEE
Confidence 99988874 3569999999999999999876644 56667877 6999998 788999999888764
No 119
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=6.9e-23 Score=140.05 Aligned_cols=138 Identities=9% Similarity=-0.007 Sum_probs=109.5
Q ss_pred CeeecCcceEE----EEcCCCeEEEEEcCCC--------ee---eeeeccCCCcEEEEEEEeC-CCEEEeecCCCeEEEE
Q 031924 1 MTFAADAMKLL----GTSGDGTLSVCNLRKN--------TV---QTRSEFSEEELTSVVLMKN-GRKVVCGSQSGTVLLY 64 (150)
Q Consensus 1 i~~~~~~~~l~----~~~~d~~i~i~d~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~ 64 (150)
++|+|++++|+ +++.|+.|++||++++ +. ...+.+|...|.+++|+|+ +..|++++.||+|++|
T Consensus 98 l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 98 LALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp EEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 47999999999 7888999999998654 21 3445668889999999998 8899999999999999
Q ss_pred EcccccccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCC------cceeEEEEcCCccE
Q 031924 65 SWGYFKDCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSE------YPIESLGIASVLCF 137 (150)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~ 137 (150)
|++.. .......+ |...+.++. +++|++|++|+.||.|++||++ ++....+..|.. ..+.+++|++++.+
T Consensus 178 D~~~~-~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 178 QVTET-VKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EESSS-EEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EcCCC-cceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 99744 44444456 788899988 8899999999999999999997 444444432211 15999999999988
Q ss_pred EEec
Q 031924 138 INSG 141 (150)
Q Consensus 138 l~s~ 141 (150)
+++.
T Consensus 255 l~~~ 258 (434)
T 2oit_A 255 AIVY 258 (434)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8543
No 120
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.89 E-value=1.9e-22 Score=135.08 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=94.4
Q ss_pred CeeecCcceEEEEcCCC----eEEEEEcCCCee----eeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccc
Q 031924 1 MTFAADAMKLLGTSGDG----TLSVCNLRKNTV----QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~----~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~ 72 (150)
++|+|+++.+++++.|+ .++.|++..... ...+..|...|++++|+|+|++|++|+.|++|++||++. ++.
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~-~~~ 303 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD-LSM 303 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC-CcE
Confidence 47999999999998776 688899877643 345678889999999999999999999999999999964 466
Q ss_pred cccc-ccccccceeEee-ecCCCEEEEecCCCcEEEEeccC
Q 031924 73 SDRF-VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILP 111 (150)
Q Consensus 73 ~~~~-~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~ 111 (150)
+.++ .+ |...|+++. +|++++|++++.|++|++||+..
T Consensus 304 ~~~~~~g-H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 304 SKIFKQA-HSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEETTS-SSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEecCc-ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 6664 67 999999998 99999999999999999999854
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=3.5e-21 Score=131.62 Aligned_cols=135 Identities=19% Similarity=0.242 Sum_probs=119.1
Q ss_pred CcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccccccee
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVD 85 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~ 85 (150)
+++.+++++.|++|++||+++++.+..+..|...+.++.|+ ++.+++++.||.|++||++ .++....+.+ |...+.
T Consensus 168 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~-~~~~~~~~~~-~~~~v~ 243 (445)
T 2ovr_B 168 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE-TGQCLHVLMG-HVAAVR 243 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESS-SCCEEEEEEC-CSSCEE
T ss_pred cCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECC-CCcEEEEEcC-CcccEE
Confidence 36789999999999999999999999999999999999985 6789999999999999986 4567777778 888888
Q ss_pred EeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 86 ALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 86 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
++.. +++.+++++.||.|++||+++++.+..+..|.. ++.+++| ++.++++|+.++.|.
T Consensus 244 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~d~~i~ 302 (445)
T 2ovr_B 244 CVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN-RVYSLQF--DGIHVVSGSLDTSIR 302 (445)
T ss_dssp EEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS-CEEEEEE--CSSEEEEEETTSCEE
T ss_pred EEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCC-ceEEEEE--CCCEEEEEeCCCeEE
Confidence 8765 788999999999999999999999999988887 6999998 888999999888764
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=2.9e-22 Score=136.98 Aligned_cols=145 Identities=8% Similarity=0.031 Sum_probs=112.7
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCC-----------eee----eeeccCCCcEEEEEEEeCCCEEE----eecCCCeE
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKN-----------TVQ----TRSEFSEEELTSVVLMKNGRKVV----CGSQSGTV 61 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~-----------~~~----~~~~~~~~~v~~~~~~~~~~~l~----~~~~d~~i 61 (150)
+++++++.++++++.++ +++|+...- ... .....+...+.+++|+|++++|+ +++.|+.|
T Consensus 42 lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v 120 (434)
T 2oit_A 42 LAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSII 120 (434)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEE
T ss_pred EEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceE
Confidence 46888899999998887 899875321 000 01112456799999999999999 78899999
Q ss_pred EEEEcccc-----c--c---cccccccccccceeEee-ecC-CCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEE
Q 031924 62 LLYSWGYF-----K--D---CSDRFVGLSPNSVDALL-KLD-EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESL 129 (150)
Q Consensus 62 ~i~~~~~~-----~--~---~~~~~~~~~~~~v~~~~-~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~ 129 (150)
++||++.. . + ....+.+ |...|.++. +|+ +++|++++.||.|++||++++........|.. .|.++
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~-~v~~v 198 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYHKLLKD-AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV-AVTSV 198 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEEECCCS-GGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG-CEEEE
T ss_pred EEEEccccccCCcCCcceeeeeeccCC-CCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC-ceeEE
Confidence 99998632 0 1 1344556 888999988 776 78999999999999999998876655556666 69999
Q ss_pred EEcCCccEEEecccccccc
Q 031924 130 GIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 130 ~~~~~~~~l~s~~~~~~v~ 148 (150)
+|+|+|++|++|+.++.|.
T Consensus 199 ~wspdg~~lasgs~dg~v~ 217 (434)
T 2oit_A 199 CWSPKGKQLAVGKQNGTVV 217 (434)
T ss_dssp EECTTSSCEEEEETTSCEE
T ss_pred EEcCCCCEEEEEcCCCcEE
Confidence 9999999999999988764
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.87 E-value=1.7e-20 Score=127.52 Aligned_cols=139 Identities=10% Similarity=-0.008 Sum_probs=116.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeee-----eeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT-----RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 75 (150)
++|+|+++++++++.++.|++||+.+++... .+..|...+.+++|+++++.+++++.|+.+++||++ .++....
T Consensus 128 ~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~-~~~~~~~ 206 (433)
T 3bws_A 128 VRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK-TLAYKAT 206 (433)
T ss_dssp CEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT-TCCEEEE
T ss_pred EEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC-CceEEEE
Confidence 5789977788888889999999999988765 345778899999999999999999999999999986 3466666
Q ss_pred cccccccceeEee-ecCCCEE-EEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEeccc
Q 031924 76 FVGLSPNSVDALL-KLDEDRV-ITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 76 ~~~~~~~~v~~~~-~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~ 143 (150)
+.. |...+.++. +++++.+ ++++.|+.|++||+++++.+..+..+ . .+..++|+|+++++++++.
T Consensus 207 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 207 VDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-G-LPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-S-EEEEEEECTTSSEEEEEEE
T ss_pred EcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-C-CceEEEEcCCCCEEEEEEC
Confidence 766 777888887 8888877 45558999999999999888887554 4 4899999999999888774
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.86 E-value=8.5e-20 Score=122.60 Aligned_cols=141 Identities=13% Similarity=0.196 Sum_probs=111.6
Q ss_pred CeeecCcceE-EEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEE-eecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
++|+|+++++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+|++++++ +++.++.|++||+. .++....+..
T Consensus 37 ~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~-~~~~~~~~~~ 114 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTT-SNTVAGTVKT 114 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEEC
T ss_pred EEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECC-CCeEEEEEeC
Confidence 4789999877 566789999999999998887776554 899999999999875 55577999999986 3455555554
Q ss_pred ccccceeEee-ecCCCEE-EEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE-Eeccccccc
Q 031924 79 LSPNSVDALL-KLDEDRV-ITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI-NSGFLSLNV 147 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~~~~~~v 147 (150)
+ ..+.++. +++++.+ ++++.++.|++||+.+++.+..+..+ . .+..++|+|+++++ ++++.++.|
T Consensus 115 -~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~~~dg~~l~~~~~~~~~v 182 (391)
T 1l0q_A 115 -G-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-R-SPKGIAVTPDGTKVYVANFDSMSI 182 (391)
T ss_dssp -S-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-S-SEEEEEECTTSSEEEEEETTTTEE
T ss_pred -C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-C-CcceEEECCCCCEEEEEeCCCCEE
Confidence 3 4566666 8888877 78888999999999999888887655 3 37999999999877 566666554
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.85 E-value=3.6e-19 Score=119.58 Aligned_cols=142 Identities=15% Similarity=0.155 Sum_probs=113.0
Q ss_pred CeeecCcceE-EEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEE-EeecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
++|+|+++.+ ++++.++.|++||+.+++....+..+ ..+.+++|+|+++.+ ++++.++.|++||++. ++....+.
T Consensus 121 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~- 197 (391)
T 1l0q_A 121 LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK- 197 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-
Confidence 4789999977 67788999999999999887777654 456999999999887 6778899999999863 35555554
Q ss_pred ccccceeEee-ecCCCEEEEec---CCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE-Eecccccccc
Q 031924 79 LSPNSVDALL-KLDEDRVITGS---ENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI-NSGFLSLNVN 148 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~~~~~~v~ 148 (150)
+...+.++. +++++.+++++ .++.|++||+.+++.+..+..+.. +.+++|+|+++++ ++++.++.|.
T Consensus 198 -~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~s~~~d~~v~ 269 (391)
T 1l0q_A 198 -VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD--PAGIAVTPDGKKVYVALSFXNTVS 269 (391)
T ss_dssp -CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS--EEEEEECTTSSEEEEEETTTTEEE
T ss_pred -cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC--ccEEEEccCCCEEEEEcCCCCEEE
Confidence 345666666 88999888887 689999999999988888866543 7899999999877 6666666553
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.83 E-value=3.5e-19 Score=117.23 Aligned_cols=129 Identities=6% Similarity=-0.082 Sum_probs=94.1
Q ss_pred CCCeEEEEEc-CCCeeeeeeccCCCcEEEEEEEe---CCCEEEeecCCCeEEEEEccccccccccccccccc---ceeEe
Q 031924 15 GDGTLSVCNL-RKNTVQTRSEFSEEELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPN---SVDAL 87 (150)
Q Consensus 15 ~d~~i~i~d~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~v~~~ 87 (150)
.|+.|++|++ ++++.+..+..|...+..++|++ ++..|++++.|++|++||++ .+++++++.+ |.. .+.++
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~-TGk~l~tL~g-~~~~v~~v~~v 232 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK-TGQLLKKMHI-DDSYQASVCHK 232 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT-TCCEEEEEEC-CC---CCCEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC-CCcEEEEEcC-CCcceeeeEEE
Confidence 3889999999 44777777788888888999998 77999999999999999996 5677888875 443 34444
Q ss_pred e-ecCCCEE------------EEecCCCcEEEEeccCCeeeeec-----cCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 88 L-KLDEDRV------------ITGSENGLISLVGILPNRIIQPI-----AEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 88 ~-~~~~~~l------------~~~~~dg~i~~~d~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
. +|++.++ ++|+.|++|++||..+++.+..+ ..|... +. ..+.++.++|+|+.++.|.
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~-~l--sg~~sg~~lASgS~DgTIk 308 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR-FL--EGDVKDHCAAAILTSGTIA 308 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC-EE--EEEEETTEEEEEETTSCEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce-eE--ccccCCCEEEEEcCCCcEE
Confidence 4 7788765 56788999999999999876654 244442 33 3333477889988887664
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=8.8e-19 Score=119.19 Aligned_cols=138 Identities=14% Similarity=0.089 Sum_probs=107.0
Q ss_pred CeeecCcceEEEEcCCC---eEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEE-eecCCC--eEEEEEccccccccc
Q 031924 1 MTFAADAMKLLGTSGDG---TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSG--TVLLYSWGYFKDCSD 74 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~i~~~~~~~~~~~ 74 (150)
++|+|+++.|++++.++ .|++||+++++.. .+..+...+.+++|+|+|++|+ +++.++ .|++||+.. ++ ..
T Consensus 184 ~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~-~~-~~ 260 (415)
T 2hqs_A 184 PAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS-GQ-IR 260 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-CC-EE
T ss_pred eEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC-CC-EE
Confidence 47999999999998775 9999999998765 4566778899999999999887 666655 488899853 23 34
Q ss_pred ccccccccceeEee-ecCCCEEEEecC-CC--cEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 75 RFVGLSPNSVDALL-KLDEDRVITGSE-NG--LISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 75 ~~~~~~~~~v~~~~-~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
.+.. +...+..+. +|+|+.|++++. ++ .|++||+.+++. ..+..+.. .+..++|+|+|++|++++..
T Consensus 261 ~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~-~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 261 QVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGS-QNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp ECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSS-EEEEEEECTTSSEEEEEEEC
T ss_pred eCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCC-cccCeEECCCCCEEEEEECc
Confidence 5666 777787777 899998888775 45 677789877764 34445555 58899999999999987753
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.83 E-value=4.4e-19 Score=120.58 Aligned_cols=142 Identities=8% Similarity=0.032 Sum_probs=114.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEE-eecCCCeEEEEEcccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVGL 79 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~ 79 (150)
++|+|+++++++++.|+.|++||+++++....+..+...+.+++|+|+++.++ +++.++.|++||++ .++....+..
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~- 252 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK-TKLEIRKTDK- 252 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT-TTEEEEECCC-
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC-CCcEEEEecC-
Confidence 36788999999999999999999999988888888888999999999999885 55589999999986 3455566654
Q ss_pred cccceeEee-ecCCCEEEEec--------CCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc-EEEeccccccc
Q 031924 80 SPNSVDALL-KLDEDRVITGS--------ENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC-FINSGFLSLNV 147 (150)
Q Consensus 80 ~~~~v~~~~-~~~~~~l~~~~--------~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~~~~v 147 (150)
+ ..+..+. +++++.+++++ .|+.|++||+.+++.+..+ .+.. .+..++|+|+++ ++++++.++.|
T Consensus 253 ~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~-~~~~~~~~~~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 253 I-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPG-NKRHIVSGNTENKIYVSDMCCSKI 327 (433)
T ss_dssp C-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEE-CEEEEEECSSTTEEEEEETTTTEE
T ss_pred C-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCC-CcceEEECCCCCEEEEEecCCCEE
Confidence 3 3466666 88998888887 5889999999988877766 4445 588999999996 45666666654
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.79 E-value=8.4e-18 Score=114.37 Aligned_cols=138 Identities=14% Similarity=0.081 Sum_probs=103.9
Q ss_pred CeeecCcceEE-EEcCCC--eEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecC-CC--eEEEEEccccccccc
Q 031924 1 MTFAADAMKLL-GTSGDG--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-SG--TVLLYSWGYFKDCSD 74 (150)
Q Consensus 1 i~~~~~~~~l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~i~~~~~~~~~~~ 74 (150)
++|+||++.|+ +++.++ .|++||+.+++. ..+..+...+.+++|+|+|++|+.++. ++ .|.+||+.. ++ ..
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~-~~-~~ 304 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-GA-PQ 304 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SC-CE
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC-CC-EE
Confidence 47999999888 565554 499999998865 456677788999999999999887775 45 666777752 22 34
Q ss_pred ccccccccceeEee-ecCCCEEEEecCC---CcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEeccccc
Q 031924 75 RFVGLSPNSVDALL-KLDEDRVITGSEN---GLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 75 ~~~~~~~~~v~~~~-~~~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~ 145 (150)
.+.. +...+..+. +|+|++|++++.+ ..|++||+.+++.. .+..+. .+..++|+|+|++|++++.+.
T Consensus 305 ~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~--~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 305 RITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF--LDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp ECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS--SCEEEEECTTSSEEEEEEEET
T ss_pred EEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC--CcCCeEEcCCCCEEEEEEcCC
Confidence 4444 556666666 8999999888764 58999999887764 444443 589999999999998887654
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.79 E-value=4.6e-18 Score=122.49 Aligned_cols=141 Identities=11% Similarity=0.034 Sum_probs=108.3
Q ss_pred CeeecCcceEEEEcC-CC-----eEEEEEcCCCeeeeeeccCC------------------------CcEEEEEEEeCCC
Q 031924 1 MTFAADAMKLLGTSG-DG-----TLSVCNLRKNTVQTRSEFSE------------------------EELTSVVLMKNGR 50 (150)
Q Consensus 1 i~~~~~~~~l~~~~~-d~-----~i~i~d~~~~~~~~~~~~~~------------------------~~v~~~~~~~~~~ 50 (150)
++|+|||++|++++. |+ .|++||+.+++.......+. ..+.+++|+|||+
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 479999999999987 88 89999999987665554332 2378899999999
Q ss_pred EEEeecCCCeEEEEEcccccc--cccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCc---
Q 031924 51 KVVCGSQSGTVLLYSWGYFKD--CSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEY--- 124 (150)
Q Consensus 51 ~l~~~~~d~~i~i~~~~~~~~--~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~--- 124 (150)
+|++++. +.|++||+.. +. ....+.. +...+..+. +|+|+.|+.++ ++.|++||+.+++..+....+...
T Consensus 122 ~l~~~~~-~~i~~~d~~~-~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQ-EGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp EEEEEET-TEEEEEESSS-CSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred EEEEEeC-CcEEEEECCC-CCcceEEEccc-CCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceec
Confidence 9998876 8999999863 21 4455666 667777776 99999999887 569999999888766554333221
Q ss_pred ------------ceeEEEEcCCccEEEeccccc
Q 031924 125 ------------PIESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 125 ------------~i~~~~~~~~~~~l~s~~~~~ 145 (150)
.+..++|+|||++|++++.+.
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 147799999999999887643
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=3.6e-18 Score=110.15 Aligned_cols=143 Identities=12% Similarity=0.039 Sum_probs=107.7
Q ss_pred CeeecCcceEE-EEcCCCeEEEEEcCC-CeeeeeeccCCCcEEEEEEEeCCCEEEeec-CCCeEEEEEcccccccccccc
Q 031924 1 MTFAADAMKLL-GTSGDGTLSVCNLRK-NTVQTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDCSDRFV 77 (150)
Q Consensus 1 i~~~~~~~~l~-~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~ 77 (150)
++|+|+++.|+ ++..++.+++|++.. +.....+..+...+.+++|+|+++.++.++ .++.+++|++...+.....+.
T Consensus 134 ~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred eEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 36899999887 677889999998642 223445566778899999999999887665 588999998863445555666
Q ss_pred cccccceeEee-ecCCCEEEEecCC-----------CcEEEEeccCCee--eeeccCCCCcceeEEEEcCCccEEEeccc
Q 031924 78 GLSPNSVDALL-KLDEDRVITGSEN-----------GLISLVGILPNRI--IQPIAEHSEYPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 78 ~~~~~~v~~~~-~~~~~~l~~~~~d-----------g~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~ 143 (150)
. +...+..+. ++++++|++++.+ +.|++||+.+++. +..+..|.. .+..++|+|++++|++++.
T Consensus 214 ~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 214 D-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQG-TMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp C-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTT-TSCSCCBCTTSSEEEEEEE
T ss_pred c-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCc-ccccceECCCCCEEEEEEe
Confidence 6 666677666 8899998888765 5699999987764 333335656 5889999999999988876
Q ss_pred cc
Q 031924 144 SL 145 (150)
Q Consensus 144 ~~ 145 (150)
+-
T Consensus 292 ~~ 293 (297)
T 2ojh_A 292 FP 293 (297)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.77 E-value=1.8e-18 Score=124.25 Aligned_cols=140 Identities=12% Similarity=-0.015 Sum_probs=105.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCC---cEEEEEEEeCCCEEEeecCC---------CeEEEEEccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE---ELTSVVLMKNGRKVVCGSQS---------GTVLLYSWGY 68 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------~~i~i~~~~~ 68 (150)
++|+||++++++ +.|++|++||+.+++....+..+.. .+.+++|+|||++|++++.+ +.+.+||+..
T Consensus 22 ~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 22 AKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp CCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred cEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC
Confidence 579999997766 6899999999999887766666554 48999999999999988764 7888999863
Q ss_pred cccc--ccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCc-----------------ceeE
Q 031924 69 FKDC--SDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEY-----------------PIES 128 (150)
Q Consensus 69 ~~~~--~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-----------------~i~~ 128 (150)
++. +..... +...+..+. +|+|+.|+.++. +.|++||+.+++..+....+... .+..
T Consensus 101 -~~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 101 -GDPQSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp -CCCEECCCTTC-CSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred -CceEeccCCcc-ccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 332 222223 334466665 999999998875 79999999887766554433221 1278
Q ss_pred EEEcCCccEEEecccc
Q 031924 129 LGIASVLCFINSGFLS 144 (150)
Q Consensus 129 ~~~~~~~~~l~s~~~~ 144 (150)
++|+|||+.|++++.+
T Consensus 178 ~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAIN 193 (723)
T ss_dssp EEECTTSSEEEEEEEE
T ss_pred EEECCCCCEEEEEEEC
Confidence 9999999999988754
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=5.6e-17 Score=104.52 Aligned_cols=140 Identities=10% Similarity=-0.024 Sum_probs=102.2
Q ss_pred CeeecCcceEEEEc--CCCeEE--EEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEE-eecCCCeEEEEEcccccccccc
Q 031924 1 MTFAADAMKLLGTS--GDGTLS--VCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDR 75 (150)
Q Consensus 1 i~~~~~~~~l~~~~--~d~~i~--i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~ 75 (150)
++|+|++++|++++ .++... .++..+++ ...+..+ ..+..++|+|+++.++ ++..++.+++|+++........
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 57999999999988 334444 45555554 3333333 3488999999999887 7778999999997533344445
Q ss_pred cccccccceeEee-ecCCCEEEEec-CCCcEEEEecc-CCeeeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 76 FVGLSPNSVDALL-KLDEDRVITGS-ENGLISLVGIL-PNRIIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 76 ~~~~~~~~v~~~~-~~~~~~l~~~~-~dg~i~~~d~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
+.. +...+..+. +++++.++.++ .++.+++|++. .+.....+..+.. .+..++|+|+|++|+.++.+
T Consensus 168 ~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 168 LTH-GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY-GDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCC-SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE-EEEEEEECTTSSEEEEEEEE
T ss_pred ccc-CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc-ccCCeEECCCCCEEEEEEcC
Confidence 555 667777777 88999777665 58899999886 4555666766666 59999999999999888765
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.76 E-value=9.6e-17 Score=112.54 Aligned_cols=142 Identities=8% Similarity=0.010 Sum_probs=110.4
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEc--ccccccccccccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSW--GYFKDCSDRFVGL 79 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~--~~~~~~~~~~~~~ 79 (150)
.|+|++..+++.+.|++|.+||..+++.+..+..... +..++|+|+|+++++++.|++|++||+ . ..+.+.++..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~-t~~~~~~i~~- 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAK-EPTKVAEIKI- 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSS-SCEEEEEEEC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCC-CCcEEEEEec-
Confidence 4688898999999999999999999998888774333 889999999999999999999999998 4 3456666654
Q ss_pred cccceeEee-ec----CCCEEEEecC-CCcEEEEeccCCeeeeeccC----------CCCcceeEEEEcCCcc-EEEecc
Q 031924 80 SPNSVDALL-KL----DEDRVITGSE-NGLISLVGILPNRIIQPIAE----------HSEYPIESLGIASVLC-FINSGF 142 (150)
Q Consensus 80 ~~~~v~~~~-~~----~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~-~l~s~~ 142 (150)
.. ....+. ++ +|+++++++. ++.|.+||..+.++++.+.. |.+..+..+.++|++. ++++..
T Consensus 221 g~-~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 221 GI-EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CS-EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CC-CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 33 345555 88 9999988884 89999999999888877753 2232488899999765 455554
Q ss_pred ccccc
Q 031924 143 LSLNV 147 (150)
Q Consensus 143 ~~~~v 147 (150)
.++.|
T Consensus 300 ~~g~i 304 (543)
T 1nir_A 300 ETGKV 304 (543)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 44433
No 135
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.75 E-value=3.1e-17 Score=107.10 Aligned_cols=108 Identities=10% Similarity=0.157 Sum_probs=87.9
Q ss_pred eeecCcce---EEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEee--cCCCeEEEEEccccccccccc
Q 031924 2 TFAADAMK---LLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG--SQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 2 ~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~ 76 (150)
.++|++.. +++++.++.|++||.+........ .+...+..+.|+|++..++++ +.|+.|++||++ .++.+.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~-~~~~~~~l 280 (318)
T 4ggc_A 203 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP-TMAKVAEL 280 (318)
T ss_dssp EECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT-TCCEEEEE
T ss_pred EecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECC-CCcEEEEE
Confidence 35565443 335678899999999988665443 456789999999999888764 489999999986 45788889
Q ss_pred ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCC
Q 031924 77 VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPN 112 (150)
Q Consensus 77 ~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~ 112 (150)
.+ |...|.++. +|++++|++++.||+|++||+.+.
T Consensus 281 ~g-H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 281 KG-HTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CC-CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cC-CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99 999999998 899999999999999999998654
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.74 E-value=9.2e-16 Score=101.51 Aligned_cols=139 Identities=13% Similarity=0.206 Sum_probs=105.5
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeecc----CCCcEEEEEEEeCCCEEEeecC-CCeEEEEEcccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF----SEEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYFKDCSDR 75 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~ 75 (150)
++|+|+++.+++++.++.+.+||..+++....+.. +...+..++|+|+++++++++. ++.+.+||.. .++....
T Consensus 190 ~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~-~~~~~~~ 268 (353)
T 3vgz_A 190 LALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR-NGNILAK 268 (353)
T ss_dssp CEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT-TCCEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC-CCcEEEE
Confidence 57899999999999999999999999987766543 4556889999999998776654 5999999985 3455555
Q ss_pred cccccccceeEeeecCCCEEE-EecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 76 FVGLSPNSVDALLKLDEDRVI-TGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 76 ~~~~~~~~v~~~~~~~~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
+.. .. ......+++++.++ +...++.|.+||..+++.+..+... . .+..++|+|+|++++.+...
T Consensus 269 ~~~-~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 269 VAA-PE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-T-HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEC-SS-CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-S-EEEEEEECTTSCEEEEEEEC
T ss_pred EEc-CC-CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-C-CCCeEEEcCCCCEEEEEEcc
Confidence 543 22 22233388888554 4557899999999999888877543 3 48899999999976665544
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.74 E-value=6e-16 Score=102.41 Aligned_cols=140 Identities=9% Similarity=0.071 Sum_probs=105.6
Q ss_pred CeeecCcceEEE-EcCCCeEEEEEcCCCeeeeeeccCCC---------cEEEEEEEeCCCEEEeec--CCCeEEEEEccc
Q 031924 1 MTFAADAMKLLG-TSGDGTLSVCNLRKNTVQTRSEFSEE---------ELTSVVLMKNGRKVVCGS--QSGTVLLYSWGY 68 (150)
Q Consensus 1 i~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~i~i~~~~~ 68 (150)
++|+|++++++. ...++.|.+||.++++....+..+.. .+.+++|+|+++++++++ .++.|.+||..
T Consensus 94 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~- 172 (353)
T 3vgz_A 94 ATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG- 172 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT-
T ss_pred EEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC-
Confidence 468999986555 45689999999999987766654332 278999999999887765 47899999986
Q ss_pred ccccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccC----CCCcceeEEEEcCCccEEEeccc
Q 031924 69 FKDCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAE----HSEYPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 69 ~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~s~~~ 143 (150)
.++....+.. +...+..+. +++++.+++++.++.+.+||+.+++....+.. +.. .+..++|+|++++++.++.
T Consensus 173 ~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 173 NIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEH-FFINISLDTARQRAFITDS 250 (353)
T ss_dssp TTEEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCC-CEEEEEEETTTTEEEEEES
T ss_pred CCceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCc-ccceEEECCCCCEEEEEeC
Confidence 3455566653 344455555 88999999999999999999999887776643 333 3778999999997665543
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=4.4e-16 Score=102.52 Aligned_cols=144 Identities=13% Similarity=0.099 Sum_probs=98.7
Q ss_pred CeeecCcceEEEEcCC-CeEEEEEcC--CCee--eeeeccCCCcEEEEEEEeCCCEEEeec-CCCeEEEEEccc--cccc
Q 031924 1 MTFAADAMKLLGTSGD-GTLSVCNLR--KNTV--QTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGY--FKDC 72 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d-~~i~i~d~~--~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~~~~~--~~~~ 72 (150)
++|+|+++++++++.+ +.|.+|++. +++. +..+..+ ..+..++|+|+++++++++ .++.+.+||+.. ..+.
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccc
Confidence 4799999988888765 999999997 5543 3334333 3778999999999886665 488999999841 1233
Q ss_pred ccccccccccceeEee-ecCCCEEEEec-CCCcEEEEeccC-Ceeee----eccCCCCcceeEEEEcCCccEEEecc-cc
Q 031924 73 SDRFVGLSPNSVDALL-KLDEDRVITGS-ENGLISLVGILP-NRIIQ----PIAEHSEYPIESLGIASVLCFINSGF-LS 144 (150)
Q Consensus 73 ~~~~~~~~~~~v~~~~-~~~~~~l~~~~-~dg~i~~~d~~~-~~~~~----~~~~~~~~~i~~~~~~~~~~~l~s~~-~~ 144 (150)
...+.. + ..+..+. +++++.+++++ .++.|++||+.+ ++... .+..+.+..+..++|+|++++++.++ .+
T Consensus 122 ~~~~~~-~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~ 199 (343)
T 1ri6_A 122 VDVVEG-L-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN 199 (343)
T ss_dssp EEEECC-C-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT
T ss_pred cccccC-C-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC
Confidence 344433 3 3455555 88998777776 899999999987 54322 22222233588899999999665443 44
Q ss_pred ccc
Q 031924 145 LNV 147 (150)
Q Consensus 145 ~~v 147 (150)
+.|
T Consensus 200 ~~i 202 (343)
T 1ri6_A 200 SSV 202 (343)
T ss_dssp TEE
T ss_pred CEE
Confidence 433
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.72 E-value=3.4e-16 Score=116.80 Aligned_cols=137 Identities=7% Similarity=-0.024 Sum_probs=110.5
Q ss_pred eeecCcceEEEEcCCCeEE-EEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 2 TFAADAMKLLGTSGDGTLS-VCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
+|+ |++.++.++.++.+. +||+..++... +..+...+..++|+|+|++|++++.++.+++||+. .++......+ |
T Consensus 344 ~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~-tg~~~~~~~~-~ 419 (1045)
T 1k32_A 344 GGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLE-TGKPTVIERS-R 419 (1045)
T ss_dssp CSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEEEC-S
T ss_pred eEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECC-CCceEEeccC-C
Confidence 578 889999888888898 99998876543 34677889999999999999999999999999985 3455444546 7
Q ss_pred ccceeEee-ecCCCEEEEecCCC----------cEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENG----------LISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg----------~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
...+..+. +|+|++|++++.++ .|++||+.+++ ...+..|.. .+..++|+|||++|+.++..
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~-~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENS-HDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSS-BEEEEEECTTSCEEEEEESC
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCc-ccCCceEcCCCCEEEEEecc
Confidence 77777766 89999998887654 89999998877 556666766 58889999999998877653
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=1.5e-15 Score=99.88 Aligned_cols=135 Identities=10% Similarity=0.009 Sum_probs=99.9
Q ss_pred eecCcc-eEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecC-CCeEEEEEccccccc-ccccccc
Q 031924 3 FAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYFKDC-SDRFVGL 79 (150)
Q Consensus 3 ~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~~~~~~~~~-~~~~~~~ 79 (150)
|.++++ .+++.+.++.|.+||.++++....+..+.... .++|+|+|+++++++. ++.|.+||+.. ++. ...+..
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~- 81 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL-EPPKVVAIQE- 81 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS-SSCEEEEEEE-
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC-CceeEEeccc-
Confidence 555555 46677789999999999998877766666666 9999999997766554 88999999863 344 555555
Q ss_pred cccceeEee-ecCCCEEEEecCCC---cEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecc
Q 031924 80 SPNSVDALL-KLDEDRVITGSENG---LISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 80 ~~~~v~~~~-~~~~~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~ 142 (150)
+..+..++. ++++++++++..++ .|++||+.+++.+..+..+ . ....++|+|+|+++++++
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~-~~~~~~~spdg~~l~~~~ 146 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-Y-DAVGIAISPNGNGLILID 146 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-T-TEEEEEECTTSSCEEEEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-C-CccceEECCCCCEEEEEe
Confidence 555555244 89999888665553 8999999999888777544 3 378999999998655443
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.71 E-value=5.9e-16 Score=108.57 Aligned_cols=143 Identities=17% Similarity=0.149 Sum_probs=105.9
Q ss_pred CeeecCcceEEEEcCCCeEEEEEc--CCCeeeeeeccCCCcEEEEEEEe----CCCEEEeecC-CCeEEEEEcccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNL--RKNTVQTRSEFSEEELTSVVLMK----NGRKVVCGSQ-SGTVLLYSWGYFKDCS 73 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~i~i~~~~~~~~~~ 73 (150)
++|+|+++++++++.|++|++||+ .+++.+..+.. ...+..++|+| +|+++++++. +++|.+||..+ .+.+
T Consensus 184 v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t-~~~~ 261 (543)
T 1nir_A 184 SRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET-LEPK 261 (543)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-CCEE
T ss_pred EEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc-cccc
Confidence 368999999999999999999999 78887777763 45679999999 9999998884 89999999853 4555
Q ss_pred cccccc---------ccc-ceeEee-ecCC-CEEEEecCCCcEEEEeccCCeeee--eccCCCCcceeEEEEcCCccEEE
Q 031924 74 DRFVGL---------SPN-SVDALL-KLDE-DRVITGSENGLISLVGILPNRIIQ--PIAEHSEYPIESLGIASVLCFIN 139 (150)
Q Consensus 74 ~~~~~~---------~~~-~v~~~~-~~~~-~~l~~~~~dg~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~ 139 (150)
+++... |+. .+..+. ++++ .++++...++.|.+||..+.+.+. .+ .+.. .+..+.|+|+|++++
T Consensus 262 ~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~-~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 262 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAP-FLHDGGWDSSHRYFM 339 (543)
T ss_dssp EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCS-SCCCEEECTTSCEEE
T ss_pred eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCc-CccCceECCCCCEEE
Confidence 555430 112 455665 6655 466677789999999998765443 34 2334 378899999999766
Q ss_pred ecc-ccccc
Q 031924 140 SGF-LSLNV 147 (150)
Q Consensus 140 s~~-~~~~v 147 (150)
+++ .+..|
T Consensus 340 va~~~~~~v 348 (543)
T 1nir_A 340 TAANNSNKV 348 (543)
T ss_dssp EEEGGGTEE
T ss_pred EEecCCCeE
Confidence 543 34444
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=1e-15 Score=100.67 Aligned_cols=137 Identities=7% Similarity=0.024 Sum_probs=97.7
Q ss_pred CeeecCcceEEEEcCCC---eEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEee-cCCCe-EEEEEccccccc---
Q 031924 1 MTFAADAMKLLGTSGDG---TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGT-VLLYSWGYFKDC--- 72 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~i~~~~~~~~~--- 72 (150)
++|+|++++++++..++ .|.+||+++++.+..+... ....+++|+|+|++++++ ..++. +.+|++...+..
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~ 167 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT 167 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec
Confidence 46899999999655553 9999999999877766543 456899999999866544 55577 999998643322
Q ss_pred -ccccccccccceeEee-ecCCCEE-EEecCCCcEEEEeccCCee---eeeccCCCCcceeEEEEcCCccEEEecc
Q 031924 73 -SDRFVGLSPNSVDALL-KLDEDRV-ITGSENGLISLVGILPNRI---IQPIAEHSEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 73 -~~~~~~~~~~~v~~~~-~~~~~~l-~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~s~~ 142 (150)
...+. .......+. +++++.+ +++..++.|++||+.+++. +..+..+ . .+..++|+|||++++.++
T Consensus 168 ~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~-~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 168 GQEFIS--GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-N-LPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp EEEEEC--SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-S-CCCCEEECTTSSEEEEEC
T ss_pred CCcccc--CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-C-CCceEEECCCCCEEEEEE
Confidence 11222 233455555 8899855 5555789999999988877 6666543 4 478899999999665443
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.70 E-value=1.4e-15 Score=99.83 Aligned_cols=140 Identities=8% Similarity=-0.034 Sum_probs=101.8
Q ss_pred CeeecCcceEEEEc------------CCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccc
Q 031924 1 MTFAADAMKLLGTS------------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY 68 (150)
Q Consensus 1 i~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~ 68 (150)
++|+|++++++++. .++.|.+||+.+++....+.. ...+.+++|+|++++++++ ++.+.+||+..
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~ 163 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEA 163 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTT
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCC
Confidence 46899999988886 579999999999887766554 4457788999999988877 68899999853
Q ss_pred ccccccccccc-----------------------------------------------------------------cccc
Q 031924 69 FKDCSDRFVGL-----------------------------------------------------------------SPNS 83 (150)
Q Consensus 69 ~~~~~~~~~~~-----------------------------------------------------------------~~~~ 83 (150)
. +....+... +...
T Consensus 164 ~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 242 (337)
T 1pby_B 164 G-TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242 (337)
T ss_dssp T-EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred C-cEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCc
Confidence 2 222111100 0011
Q ss_pred eeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 84 VDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 84 v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
+..+. +++++.++++ ++.|++||+.+++.+..+..+ . .+..++|+|+|+++++++.++.|.
T Consensus 243 ~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~i~ 304 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-H-SYYSVNVSTDGSTVWLGGALGDLA 304 (337)
T ss_dssp EEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-S-CCCEEEECTTSCEEEEESBSSEEE
T ss_pred eeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-C-ceeeEEECCCCCEEEEEcCCCcEE
Confidence 22344 7788888887 789999999998887777543 3 478999999999888877666553
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.70 E-value=1.5e-16 Score=114.39 Aligned_cols=137 Identities=11% Similarity=0.023 Sum_probs=99.4
Q ss_pred CeeecCcceEEEEcCC---------CeEEEEEcCCCeeeeeec---cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccc
Q 031924 1 MTFAADAMKLLGTSGD---------GTLSVCNLRKNTVQTRSE---FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY 68 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~ 68 (150)
++||||+++|++++.+ +.+.+||+.+++. ..+. .+...+..++|+|||+.|+.++. +.|++||+..
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC
Confidence 3699999999998764 7889999998865 2232 33445889999999999998876 7999999853
Q ss_pred ccccccccccccccce------------------eEee-ecCCCEEEEecCCC---------------------------
Q 031924 69 FKDCSDRFVGLSPNSV------------------DALL-KLDEDRVITGSENG--------------------------- 102 (150)
Q Consensus 69 ~~~~~~~~~~~~~~~v------------------~~~~-~~~~~~l~~~~~dg--------------------------- 102 (150)
++..+.... +...+ ..+. +|+|+.|++++.++
T Consensus 144 -g~~~~~~~~-~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (723)
T 1xfd_A 144 -KQAIRVVST-GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKA 221 (723)
T ss_dssp -SCCEEEECC-CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBT
T ss_pred -CceEEEecC-CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCC
Confidence 333332222 22222 4555 89999999887543
Q ss_pred -------cEEEEeccCCeeeeeccCC------CCcceeEEEEcCCccEEEecc
Q 031924 103 -------LISLVGILPNRIIQPIAEH------SEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 103 -------~i~~~d~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~s~~ 142 (150)
.|++||+.+++....+..+ .. .+..++|+|||+++++.+
T Consensus 222 G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~-~~~~~~~SpDg~~l~~~~ 273 (723)
T 1xfd_A 222 GSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY-YITMVKWATSTKVAVTWL 273 (723)
T ss_dssp TSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE-EEEEEEESSSSEEEEEEE
T ss_pred CCCCCeeEEEEEECCCCceeEEeeCCccCCCccc-eeEEEEEeCCCeEEEEEE
Confidence 7999999887755555443 33 589999999999987654
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.69 E-value=1.2e-15 Score=101.07 Aligned_cols=140 Identities=8% Similarity=0.046 Sum_probs=94.7
Q ss_pred CeeecCcceEEEEcC---CCeEEEEEcCCCee--eeeeccCCCcEEEEEEEeCCCEEEeec-CCCeEEEEEcccccc--c
Q 031924 1 MTFAADAMKLLGTSG---DGTLSVCNLRKNTV--QTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKD--C 72 (150)
Q Consensus 1 i~~~~~~~~l~~~~~---d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~~~~~~~~--~ 72 (150)
++|+|+++ +++++. ++.|.+|++..++. +..+..+...+..++|+|+|++|++++ .++.+.+|++...+. .
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTL 123 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeee
Confidence 47899999 555543 68999999987653 334344566788999999999888877 779999999853322 2
Q ss_pred ccccccc-c-------ccceeEee-ecCCCEEEEecCCCcEEEEecc-CCeee--eeccCCCCcceeEEEEcCCccEEEe
Q 031924 73 SDRFVGL-S-------PNSVDALL-KLDEDRVITGSENGLISLVGIL-PNRII--QPIAEHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 73 ~~~~~~~-~-------~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~-~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s 140 (150)
...+... . ...+.++. +|+++++++...++.|++|++. +++.. ..+..+.+..+..++|+|||++++.
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFL 203 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred cceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEE
Confidence 2222110 0 11355565 8899977777778999999998 44432 2222233334788999999996555
Q ss_pred c
Q 031924 141 G 141 (150)
Q Consensus 141 ~ 141 (150)
.
T Consensus 204 ~ 204 (347)
T 3hfq_A 204 A 204 (347)
T ss_dssp E
T ss_pred E
Confidence 3
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.69 E-value=7e-15 Score=96.78 Aligned_cols=145 Identities=7% Similarity=0.020 Sum_probs=97.2
Q ss_pred CeeecCcceEEEEc-CCCeEEEEEcCC-Ceeee----eecc-CCCcEEEEEEEeCCCEEEee-cCCCeEEEEEcccc-cc
Q 031924 1 MTFAADAMKLLGTS-GDGTLSVCNLRK-NTVQT----RSEF-SEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYF-KD 71 (150)
Q Consensus 1 i~~~~~~~~l~~~~-~d~~i~i~d~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~-~~ 71 (150)
++|+|+++++++++ .++.|.+||+.+ ++... .... ....+..++|+|++++++++ ..++.+.+|++... ++
T Consensus 134 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~ 213 (343)
T 1ri6_A 134 ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGN 213 (343)
T ss_dssp CEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSC
T ss_pred EEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 57999999888877 899999999987 64432 2222 33478899999999977554 58899999998531 11
Q ss_pred c--ccccc---ccc--ccceeEee-ecCCCEEE-EecCCCcEEEEecc--C--CeeeeeccCCCCcceeEEEEcCCccEE
Q 031924 72 C--SDRFV---GLS--PNSVDALL-KLDEDRVI-TGSENGLISLVGIL--P--NRIIQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 72 ~--~~~~~---~~~--~~~v~~~~-~~~~~~l~-~~~~dg~i~~~d~~--~--~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
. ...+. ..+ ...+..+. +++++.++ +...++.|++||+. + .+.+..+..+ . .+..++|+|+|++|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l 291 (343)
T 1ri6_A 214 IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-T-QPRGFNVDHSGKYL 291 (343)
T ss_dssp CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-S-SCCCEEECTTSSEE
T ss_pred EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-C-ccceEEECCCCCEE
Confidence 1 11111 101 12344455 88888776 55578999999997 2 2344444333 3 37889999999987
Q ss_pred Eecc-ccccc
Q 031924 139 NSGF-LSLNV 147 (150)
Q Consensus 139 ~s~~-~~~~v 147 (150)
++++ .++.|
T Consensus 292 ~~~~~~~~~v 301 (343)
T 1ri6_A 292 IAAGQKSHHI 301 (343)
T ss_dssp EEECTTTCEE
T ss_pred EEecCCCCeE
Confidence 7766 34443
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.69 E-value=7.3e-16 Score=115.04 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=111.7
Q ss_pred Ceee-cCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCC-cEEEEEEEeCCCEEEeecCCCeEE-EEEcccccccccccc
Q 031924 1 MTFA-ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE-ELTSVVLMKNGRKVVCGSQSGTVL-LYSWGYFKDCSDRFV 77 (150)
Q Consensus 1 i~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~-i~~~~~~~~~~~~~~ 77 (150)
++|+ ||++.|+.++ ++.+.+|+...++.. .+..+.. .+..++|+ +|+.++.++.++.+. +|++.. ++ ...+.
T Consensus 301 ~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~-~~-~~~l~ 375 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT-GK-AEKFE 375 (1045)
T ss_dssp EEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT-CC-EEECC
T ss_pred eeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC-CC-ceEec
Confidence 4689 9999999887 789999999887644 3556666 89999999 999999888888888 889752 23 23344
Q ss_pred cccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 78 GLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 78 ~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
+ +...+..+. +|+|+.|++++.++.+++||+.+++.......|.. .+..++|+|||++|++++..
T Consensus 376 ~-~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~-~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 376 E-NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA-MITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp C-CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-CCCCEEECTTSCEEEEEEEE
T ss_pred C-CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC-CccceEECCCCCeEEEEecC
Confidence 5 767777777 99999999999999999999998887777666767 58999999999999887654
No 148
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.69 E-value=2.5e-16 Score=113.32 Aligned_cols=137 Identities=11% Similarity=0.016 Sum_probs=99.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCC---cEEEEEEEeCCCEEEeecC---------CCeEEEEEccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE---ELTSVVLMKNGRKVVCGSQ---------SGTVLLYSWGY 68 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~i~i~~~~~ 68 (150)
++|+|++++++++ .|+.|++||+.+++....+..+.. .+.+++|+|||++|+.++. ++.+++||+..
T Consensus 21 ~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 21 PNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred cEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 4799999655554 699999999999887655554432 3889999999999988876 68999999853
Q ss_pred ccccc--cccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeecc-CCCCc----------------ceeE
Q 031924 69 FKDCS--DRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIA-EHSEY----------------PIES 128 (150)
Q Consensus 69 ~~~~~--~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~----------------~i~~ 128 (150)
++.. ..+. ..+..+. +|+|+.|+.+. ++.|++|++.+++..+... .+... ....
T Consensus 100 -g~~~~~~~l~----~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 100 -GEFVRGNELP----RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp -TEECCSSCCC----SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred -CccccceecC----cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 3332 2222 2345455 99999999885 7899999998877654331 22110 1148
Q ss_pred EEEcCCccEEEecccc
Q 031924 129 LGIASVLCFINSGFLS 144 (150)
Q Consensus 129 ~~~~~~~~~l~s~~~~ 144 (150)
++|+|||++|++++.+
T Consensus 174 ~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFN 189 (719)
T ss_dssp EEECTTSSEEEEEEEE
T ss_pred EEECCCCCEEEEEEEC
Confidence 9999999999998764
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.68 E-value=8.6e-16 Score=110.77 Aligned_cols=137 Identities=11% Similarity=0.044 Sum_probs=101.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe--eeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
++|+||+++|++++. +.|.+||+.+++ ....+..+...+..++|+|||++|+.++ ++.|++||+.. ++.......
T Consensus 114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~-g~~~~~~~~ 190 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS-GRQMQLTAD 190 (741)
T ss_dssp CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT-TEEEECCCC
T ss_pred eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCC-CCEEEeccC
Confidence 479999999999876 899999999872 3445566777899999999999999886 46899999863 333332222
Q ss_pred ccccc----------------eeEee-ecCCCEEEEecCCC---------------------------------cEEEEe
Q 031924 79 LSPNS----------------VDALL-KLDEDRVITGSENG---------------------------------LISLVG 108 (150)
Q Consensus 79 ~~~~~----------------v~~~~-~~~~~~l~~~~~dg---------------------------------~i~~~d 108 (150)
+... +..+. +|+|+.|++++.|+ .|++||
T Consensus 191 -~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 -GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp -CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred -CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 2221 24444 89999999887665 788899
Q ss_pred ccC-Ceeeeecc--CCCCcceeEEEEcCCccEEEeccc
Q 031924 109 ILP-NRIIQPIA--EHSEYPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 109 ~~~-~~~~~~~~--~~~~~~i~~~~~~~~~~~l~s~~~ 143 (150)
+.+ ++...... .|.. .+..++| |||++|+.++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~-~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDI-YLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp SSTTCCCEEECCCSCSSE-EEEEEEE-EETTEEEEEEE
T ss_pred CCCCCceEEecCCCCcce-EEEEEEe-CCCCEEEEEEe
Confidence 987 76544432 3545 5999999 99999986654
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.68 E-value=5.2e-16 Score=109.40 Aligned_cols=133 Identities=7% Similarity=-0.070 Sum_probs=103.3
Q ss_pred CeeecCcceEEEEcCC----CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCC--eEEEEEccccccccc
Q 031924 1 MTFAADAMKLLGTSGD----GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG--TVLLYSWGYFKDCSD 74 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~i~~~~~~~~~~~ 74 (150)
++|+|||++|+.++.+ ..|++||+.+++.. .+..+...+..++|+|||+.|+++..++ .|++||+.. ++..
T Consensus 155 ~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~-~~~~- 231 (582)
T 3o4h_A 155 FVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD-GSVE- 231 (582)
T ss_dssp EEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT-CCEE-
T ss_pred EEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC-CcEE-
Confidence 3689999999987766 78999999988654 5677788899999999999999888888 899999863 3333
Q ss_pred ccccccccceeE-e--------eecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 75 RFVGLSPNSVDA-L--------LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 75 ~~~~~~~~~v~~-~--------~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
.+.+ +...+.. . .+|+|.++++++.++.+++|++ ++.... ..+ .+..++|+ +++++++++..
T Consensus 232 ~~~~-~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~---~~~-~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 232 DLEL-PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEA---PQG-NHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp ECCC-SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECC---CSS-EEEEEEEE-TTEEEEEEEET
T ss_pred EccC-CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeecc---CCC-ceEEEEec-CCEEEEEEcCC
Confidence 4444 4443332 1 4789988899999999999999 665542 234 48899999 99998877654
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.68 E-value=5.3e-16 Score=109.34 Aligned_cols=138 Identities=6% Similarity=-0.092 Sum_probs=102.1
Q ss_pred eeecCcce-EEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCC----CeEEEEEccccccccccc
Q 031924 2 TFAADAMK-LLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----GTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 2 ~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~ 76 (150)
+|+|+++. ++++..++.+.+||+.+++.......+ . .+++|+|||++++.++.+ +.|++||+.. ++ ...+
T Consensus 116 ~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~-g~-~~~l 190 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS-GG-LRVF 190 (582)
T ss_dssp EEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTT-CC-CEEE
T ss_pred eeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC-CC-ceEe
Confidence 57888763 333334455669999988755443332 2 789999999999987766 7899999752 33 3455
Q ss_pred ccccccceeEee-ecCCCEEEEecCCC--cEEEEeccCCeeeeeccCCCCcceeEEE--------EcCCccEEEeccccc
Q 031924 77 VGLSPNSVDALL-KLDEDRVITGSENG--LISLVGILPNRIIQPIAEHSEYPIESLG--------IASVLCFINSGFLSL 145 (150)
Q Consensus 77 ~~~~~~~v~~~~-~~~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~s~~~~~ 145 (150)
.. +...+.... +|+|+.|+++..++ .|++||+.+++.. .+..+.. .+..++ |+|||.++++++.++
T Consensus 191 ~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 191 DS-GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK-DFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CC-SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS-HHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred ec-CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc-ChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 66 777777776 99999999888888 8999999888776 6666655 466666 999998888887776
Q ss_pred cc
Q 031924 146 NV 147 (150)
Q Consensus 146 ~v 147 (150)
.+
T Consensus 268 ~~ 269 (582)
T 3o4h_A 268 RS 269 (582)
T ss_dssp EE
T ss_pred cE
Confidence 54
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.66 E-value=3.7e-15 Score=107.00 Aligned_cols=141 Identities=10% Similarity=0.014 Sum_probs=101.9
Q ss_pred CeeecCcceEEEEc---------------------------------CCCeEEEEEcCCCeeeeeec--cCCCcEEEEEE
Q 031924 1 MTFAADAMKLLGTS---------------------------------GDGTLSVCNLRKNTVQTRSE--FSEEELTSVVL 45 (150)
Q Consensus 1 i~~~~~~~~l~~~~---------------------------------~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~ 45 (150)
+.|+||+++|++++ .+..|.+||+.+++...... .+...+..++|
T Consensus 186 ~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 265 (706)
T 2z3z_A 186 TFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSW 265 (706)
T ss_dssp EEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEE
Confidence 36999999999987 45789999999887544332 45678999999
Q ss_pred EeCCCEEEeecCCC-----eEEEEEcccccccccccc-cccccc---eeEee-ec--CCCEEEEecCCCcEEEEecc-CC
Q 031924 46 MKNGRKVVCGSQSG-----TVLLYSWGYFKDCSDRFV-GLSPNS---VDALL-KL--DEDRVITGSENGLISLVGIL-PN 112 (150)
Q Consensus 46 ~~~~~~l~~~~~d~-----~i~i~~~~~~~~~~~~~~-~~~~~~---v~~~~-~~--~~~~l~~~~~dg~i~~~d~~-~~ 112 (150)
+|||++|++++.++ .|.+||+.. ++....+. ..+... +..+. ++ +|++++++..|+.+++|.+. ++
T Consensus 266 spdg~~l~~~~~~~~~~~~~v~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~ 344 (706)
T 2z3z_A 266 SPDENILYVAEVNRAQNECKVNAYDAET-GRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG 344 (706)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEEETTT-CCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS
T ss_pred ECCCCEEEEEEeCCCCCeeEEEEEECCC-CceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC
Confidence 99999999877665 899999863 31222221 102221 23344 78 89999999999999999876 56
Q ss_pred eeeeeccCCCCcceeE-EEEcCCccEEEeccc
Q 031924 113 RIIQPIAEHSEYPIES-LGIASVLCFINSGFL 143 (150)
Q Consensus 113 ~~~~~~~~~~~~~i~~-~~~~~~~~~l~s~~~ 143 (150)
+.+..+..+.. .+.. ++|+|+|+.|+.++.
T Consensus 345 ~~~~~l~~~~~-~v~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 345 RLIRQVTKGEW-EVTNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp CEEEECCCSSS-CEEEEEEECTTSSEEEEEES
T ss_pred CEEEecCCCCe-EEEeeeEEcCCCCEEEEEec
Confidence 66677766655 5766 799999987765443
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.66 E-value=2.6e-14 Score=94.70 Aligned_cols=142 Identities=11% Similarity=0.134 Sum_probs=96.2
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcC-CCeee--eeecc-CCCcEEEEEEEeCCCEEEe-ecCCCeEEEEEccc-ccc--c
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLR-KNTVQ--TRSEF-SEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWGY-FKD--C 72 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~~-~~~d~~i~i~~~~~-~~~--~ 72 (150)
++|+|+++++++...++.|.+|++. .++.. ..... .......++|+|+|+++++ ...++.+.+|++.. .++ .
T Consensus 146 ~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred EEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 4689999966666778999999998 45432 22222 2336788999999996655 56789999999863 122 1
Q ss_pred ccccccccc------cceeEee-ecCCCEE-EEecCCCcEEEEeccCC---eeeeeccCCCCcceeEEEEcCCccEEEec
Q 031924 73 SDRFVGLSP------NSVDALL-KLDEDRV-ITGSENGLISLVGILPN---RIIQPIAEHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 73 ~~~~~~~~~------~~v~~~~-~~~~~~l-~~~~~dg~i~~~d~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
...+.. .+ ..+..+. +++|+++ ++...++.|.+|++... +.+..+..+.. .+..++|+|||++|+++
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 226 LGIVKT-IPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD-FPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp EEEEES-SCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSS-CCCEEEECTTSSEEEEE
T ss_pred eeeeee-cCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCC-CcCeEEECCCCCEEEEE
Confidence 222221 11 3355565 8999977 55566899999998632 34555545444 47899999999988776
Q ss_pred ccc
Q 031924 142 FLS 144 (150)
Q Consensus 142 ~~~ 144 (150)
+..
T Consensus 304 ~~~ 306 (347)
T 3hfq_A 304 NQN 306 (347)
T ss_dssp ETT
T ss_pred EcC
Confidence 543
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.66 E-value=2e-14 Score=95.71 Aligned_cols=139 Identities=9% Similarity=0.089 Sum_probs=93.9
Q ss_pred CeeecCcceEEEEc-CCCeEEEEEcCCCe-------e------eeeeccCCCcEEEEEEEeCCCEEEeec-CCCeEEEEE
Q 031924 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNT-------V------QTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYS 65 (150)
Q Consensus 1 i~~~~~~~~l~~~~-~d~~i~i~d~~~~~-------~------~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~~ 65 (150)
++|+|+++++++++ .++.+.+|++.... . .............++|+|+|+++++++ .++.|.+|+
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR 239 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence 46899999666554 68999999987543 1 111223345678999999999887766 689999999
Q ss_pred ccccccc--cccccc--ccccceeEee-ecCCCEEEEecC--CCcEEEEecc--CCe--eeeeccCCCCcceeEEEEcCC
Q 031924 66 WGYFKDC--SDRFVG--LSPNSVDALL-KLDEDRVITGSE--NGLISLVGIL--PNR--IIQPIAEHSEYPIESLGIASV 134 (150)
Q Consensus 66 ~~~~~~~--~~~~~~--~~~~~v~~~~-~~~~~~l~~~~~--dg~i~~~d~~--~~~--~~~~~~~~~~~~i~~~~~~~~ 134 (150)
+.. +.. ...+.. .+......+. +++|++|+++.. ++.|.+|++. +++ .+..+.. .. .+..++|+||
T Consensus 240 ~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~-~~~~~~~spd 316 (361)
T 3scy_A 240 YAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GI-HPRNFIITPN 316 (361)
T ss_dssp EET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SS-CCCEEEECTT
T ss_pred ecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CC-CCceEEECCC
Confidence 862 222 222221 0223345665 899998866554 5899999985 344 3444433 33 4789999999
Q ss_pred ccEEEecc
Q 031924 135 LCFINSGF 142 (150)
Q Consensus 135 ~~~l~s~~ 142 (150)
|++|++++
T Consensus 317 g~~l~~~~ 324 (361)
T 3scy_A 317 GKYLLVAC 324 (361)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 99888776
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.66 E-value=1.6e-15 Score=108.90 Aligned_cols=143 Identities=13% Similarity=0.065 Sum_probs=101.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCC-----CeeeeeeccCCCc--------------EEEEEEEeCCCEEEeec-----
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRK-----NTVQTRSEFSEEE--------------LTSVVLMKNGRKVVCGS----- 56 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~----- 56 (150)
++|+||++.|+.+ .++.|++||+.+ ++........... +.++.|+|||++|++++
T Consensus 126 ~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~ 204 (706)
T 2z3z_A 126 LDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSM 204 (706)
T ss_dssp CEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTT
T ss_pred CcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCC
Confidence 4799999999986 678999999998 7655433333232 47899999999999887
Q ss_pred ----------------------------CCCeEEEEEccccccccccc--ccccccceeEee-ecCCCEEEEecCCC---
Q 031924 57 ----------------------------QSGTVLLYSWGYFKDCSDRF--VGLSPNSVDALL-KLDEDRVITGSENG--- 102 (150)
Q Consensus 57 ----------------------------~d~~i~i~~~~~~~~~~~~~--~~~~~~~v~~~~-~~~~~~l~~~~~dg--- 102 (150)
.+..|++||+.. ++..... .. +...+..+. +|+|+.|++++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~ 282 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT-GKTVYLQTGEP-KEKFLTNLSWSPDENILYVAEVNRAQN 282 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT-TEEEECCCCSC-TTCEEEEEEECTTSSEEEEEEECTTSC
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC-CceEeeccCCC-CceeEeeEEEECCCCEEEEEEeCCCCC
Confidence 446799999863 3322222 13 555677776 89999998877665
Q ss_pred --cEEEEeccCCeeeeecc-C-CCCc--ceeEEEEcC--CccEEEecccccc
Q 031924 103 --LISLVGILPNRIIQPIA-E-HSEY--PIESLGIAS--VLCFINSGFLSLN 146 (150)
Q Consensus 103 --~i~~~d~~~~~~~~~~~-~-~~~~--~i~~~~~~~--~~~~l~s~~~~~~ 146 (150)
.|++||+.+++....+. . +... .+..++|+| ||+++++++.++.
T Consensus 283 ~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 89999998883333221 1 1111 246789999 9999988876654
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.65 E-value=3e-15 Score=108.32 Aligned_cols=138 Identities=10% Similarity=-0.003 Sum_probs=100.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCC-----cEEEEEEEeCCCEEEeecCC---------CeEEEEEc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE-----ELTSVVLMKNGRKVVCGSQS---------GTVLLYSW 66 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d---------~~i~i~~~ 66 (150)
+.|+||+++++++ |+.|++||+.+++....+..+.. ....+.|||||++|+.++.+ +.+.+||+
T Consensus 22 ~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 22 LRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 4799999988886 89999999999987666665543 22458899999999988775 56679998
Q ss_pred ccccccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeecc-CCCCc----------------ceeE
Q 031924 67 GYFKDCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIA-EHSEY----------------PIES 128 (150)
Q Consensus 67 ~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~----------------~i~~ 128 (150)
.. ++. ..+.. +...+.... +|+|+.|+.+ .++.|++|++.+++..+... .+... ....
T Consensus 100 ~~-~~~-~~l~~-~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 100 NK-RQL-ITEER-IPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp TT-TEE-CCSSC-CCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred CC-CcE-EEccc-CCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcc
Confidence 63 333 34555 666677666 9999999887 47899999998776544321 22111 1235
Q ss_pred EEEcCCccEEEecccc
Q 031924 129 LGIASVLCFINSGFLS 144 (150)
Q Consensus 129 ~~~~~~~~~l~s~~~~ 144 (150)
+.|||||+.||..+.+
T Consensus 176 ~~wSpDg~~la~~~~d 191 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQFN 191 (740)
T ss_dssp EEECTTSSEEEEEEEE
T ss_pred eEECCCCCEEEEEEEc
Confidence 8999999999987653
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=4.3e-16 Score=112.09 Aligned_cols=134 Identities=12% Similarity=-0.002 Sum_probs=95.9
Q ss_pred CeeecCcceEEEEcC---------CCeEEEEEcCCCeee--eeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccc
Q 031924 1 MTFAADAMKLLGTSG---------DGTLSVCNLRKNTVQ--TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (150)
Q Consensus 1 i~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~ 69 (150)
++|||||++|+.++. ++.|++||+.+++.+ ..+ ...+..++|+|||+.|+.+. ++.|++|++..
T Consensus 65 ~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~- 139 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPG- 139 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTT-
T ss_pred EEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCC-
Confidence 369999999998876 789999999998762 222 24678899999999998885 78999999853
Q ss_pred ccccccc-ccccccce-----------------eEee-ecCCCEEEEecCCC----------------------------
Q 031924 70 KDCSDRF-VGLSPNSV-----------------DALL-KLDEDRVITGSENG---------------------------- 102 (150)
Q Consensus 70 ~~~~~~~-~~~~~~~v-----------------~~~~-~~~~~~l~~~~~dg---------------------------- 102 (150)
++..+.. .+ +...+ ..+. +|+|+.|++++.|.
T Consensus 140 g~~~~l~~~~-~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g 218 (719)
T 1z68_A 140 DPPFQITFNG-RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAG 218 (719)
T ss_dssp SCCEECCCCC-BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTT
T ss_pred CCcEEEecCC-CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCC
Confidence 2322211 12 22211 2454 99999999887652
Q ss_pred ------cEEEEeccCCeee---e-----eccCCCCcceeEEEEcCCccEEEec
Q 031924 103 ------LISLVGILPNRII---Q-----PIAEHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 103 ------~i~~~d~~~~~~~---~-----~~~~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
.|++||+.+++.. + .+..|.. .+..++|+||++++++.
T Consensus 219 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~SpD~~~~~~~ 270 (719)
T 1z68_A 219 AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY-YFSWLTWVTDERVCLQW 270 (719)
T ss_dssp SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE-EEEEEEESSSSEEEEEE
T ss_pred CCCCeeEEEEEECCCCCccceeEccCCccCCCCcc-eEEEeEEeCCCeEEEEE
Confidence 7889999876642 1 1234555 48999999999887773
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.63 E-value=1.2e-14 Score=95.94 Aligned_cols=136 Identities=10% Similarity=0.023 Sum_probs=98.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCC-CcEEEEEEEeCCCEE-EeecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-EELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
++++++++++++++.+++|.+||..+++....+.... ..+..++|+|+++++ ++...++.|.+||+.. ++....+..
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t-~~~~~~~~~ 83 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-CKNTFHANL 83 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEES
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC-CcEEEEEEc
Confidence 4577888999999999999999999998877665443 256789999999866 4556789999999853 344444432
Q ss_pred cc-----ccceeEee-ecCCCEEEEecCC------------CcEEEEeccCCeee---eeccCCCCcceeEEEEcCCccE
Q 031924 79 LS-----PNSVDALL-KLDEDRVITGSEN------------GLISLVGILPNRII---QPIAEHSEYPIESLGIASVLCF 137 (150)
Q Consensus 79 ~~-----~~~v~~~~-~~~~~~l~~~~~d------------g~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~ 137 (150)
.+ ...+..+. +++++.+++++.+ +.|.+||+.+++.. ..+. +.. .+.+++|+|+|++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~-~~~~~~~s~dg~l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPR-QVYLMRAADDGSL 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCS-SCCCEEECTTSCE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCC-cccceeECCCCcE
Confidence 02 12244444 8899999988865 89999999875433 3332 333 4888999999995
Q ss_pred EE
Q 031924 138 IN 139 (150)
Q Consensus 138 l~ 139 (150)
++
T Consensus 162 ~~ 163 (349)
T 1jmx_B 162 YV 163 (349)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.62 E-value=3.8e-14 Score=93.03 Aligned_cols=132 Identities=11% Similarity=-0.007 Sum_probs=97.6
Q ss_pred ceEEEEcCCCeEEEEEcCCCeeeeeeccCCC--cEEEEEEEeCCCEE-EeecCCCeEEEEEccccccccccccccc----
Q 031924 8 MKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE--ELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFVGLS---- 80 (150)
Q Consensus 8 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~---- 80 (150)
+++++++.++.|.+||..+++.+..+..... .+..++|+|+++.+ +++..++.|.+||+.. ++....+...+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT-GETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT-CCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC-CCeEeeEEcCCcccc
Confidence 5788899999999999999988776653322 47889999999766 5566789999999853 45444444201
Q ss_pred ccceeEee-ecCCCEEEEec------------CCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecc
Q 031924 81 PNSVDALL-KLDEDRVITGS------------ENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~------------~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~ 142 (150)
...+..+. +++++.++++. .++.|++||+.+++....+.. .. .+..++|+|+|+++++++
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~-~~~~~~~s~dg~~l~~~~ 153 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PR-QITMLAWARDGSKLYGLG 153 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CS-SCCCEEECTTSSCEEEES
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CC-CcceeEECCCCCEEEEeC
Confidence 11344444 88998888875 579999999998887777654 23 478899999999877763
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.61 E-value=1.2e-14 Score=96.00 Aligned_cols=138 Identities=7% Similarity=-0.019 Sum_probs=95.6
Q ss_pred CeeecCcceEEEEcCC------------CeEEEEEcCCCeee---eeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEE
Q 031924 1 MTFAADAMKLLGTSGD------------GTLSVCNLRKNTVQ---TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYS 65 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~ 65 (150)
++|+|+++++++++.+ +.|.+||+++++.. .... +...+.+++|+|+|+ +++++. .+.+||
T Consensus 97 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d 172 (349)
T 1jmx_B 97 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMD 172 (349)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEEC
T ss_pred eEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEe
Confidence 4689999999998755 89999999885432 2222 334678899999999 555544 499999
Q ss_pred cccccccccccccccc----------------------------------------------------------------
Q 031924 66 WGYFKDCSDRFVGLSP---------------------------------------------------------------- 81 (150)
Q Consensus 66 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 81 (150)
... ++....+.. +.
T Consensus 173 ~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (349)
T 1jmx_B 173 VKT-GKYTVALPL-RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF 250 (349)
T ss_dssp TTT-CCEEEEECS-TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEE
T ss_pred CCC-Cceeccccc-cccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccc
Confidence 853 333333321 11
Q ss_pred ----cceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 82 ----NSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 82 ----~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
..+..+. ++ +++.++++ ++.|++||+.+++.+..+... . .+..++|+|+|++|++++.++.|.
T Consensus 251 ~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~v~ 319 (349)
T 1jmx_B 251 ADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-H-TYYCVAFDKKGDKLYLGGTFNDLA 319 (349)
T ss_dssp EECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-S-CCCEEEECSSSSCEEEESBSSEEE
T ss_pred ccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-C-CccceEECCCCCEEEEecCCCeEE
Confidence 0111222 47 88888887 889999999998887776433 3 377899999999888776665543
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.59 E-value=2.4e-14 Score=95.77 Aligned_cols=139 Identities=8% Similarity=0.086 Sum_probs=94.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcC-CCeeeeeecc-CCCcEEEEEEEeCCCE--EEeec-------------CCCeEEE
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLR-KNTVQTRSEF-SEEELTSVVLMKNGRK--VVCGS-------------QSGTVLL 63 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~--l~~~~-------------~d~~i~i 63 (150)
++|+|++++|++++.+ .|.+|++. +++....... ..+....++|+|+|++ +++++ .++.+.+
T Consensus 45 ~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 4689999999988877 99999997 7765432221 1123456889999994 45554 6899999
Q ss_pred EEcccccccccccc----cccccceeEee-ecCCCEEEEec-CCCcEEEEecc-CCeee--eecc--CCCCcceeEEEEc
Q 031924 64 YSWGYFKDCSDRFV----GLSPNSVDALL-KLDEDRVITGS-ENGLISLVGIL-PNRII--QPIA--EHSEYPIESLGIA 132 (150)
Q Consensus 64 ~~~~~~~~~~~~~~----~~~~~~v~~~~-~~~~~~l~~~~-~dg~i~~~d~~-~~~~~--~~~~--~~~~~~i~~~~~~ 132 (150)
|++...++....+. . +...+..+. +|+|++++++. .++.|++|++. +++.. ..+. .+.. .+..++|+
T Consensus 124 ~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~-~p~~~~~s 201 (365)
T 1jof_A 124 FSVSETGKLEKNVQNYEYQ-ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD-HPRWVAMH 201 (365)
T ss_dssp EEECTTCCEEEEEEEEECC-TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC-CEEEEEEC
T ss_pred EccCCCCcCcceEeeEEeC-CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC-CCCEeEEC
Confidence 99864344333222 1 234456666 89999877665 46899999997 66542 2332 1234 58899999
Q ss_pred CCccEEEecc
Q 031924 133 SVLCFINSGF 142 (150)
Q Consensus 133 ~~~~~l~s~~ 142 (150)
|||+++++++
T Consensus 202 pdg~~l~v~~ 211 (365)
T 1jof_A 202 PTGNYLYALM 211 (365)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9999887654
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.58 E-value=3.7e-14 Score=101.20 Aligned_cols=141 Identities=11% Similarity=0.005 Sum_probs=99.2
Q ss_pred CeeecCcceEEEEcCC----------CeEEEEEcCC------Ceeeeeec-cCCCcEEEEEEEeCCCEEEeecCC-----
Q 031924 1 MTFAADAMKLLGTSGD----------GTLSVCNLRK------NTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQS----- 58 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d----------~~i~i~d~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----- 58 (150)
++|+||++.|+.++.+ ..|.+||+.+ ++. ..+. .+...+..++|+|||++|+..+.+
T Consensus 135 ~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~ 213 (662)
T 3azo_A 135 PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMP 213 (662)
T ss_dssp EEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCT
T ss_pred cEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCC
Confidence 3699999999988776 5899999988 543 3444 555678889999999999877644
Q ss_pred ---CeEEEEEccccc---ccccccccccccceeEee-ecCCCEEEEecCCC--cEEEEeccCCeeeeeccCCCCc-----
Q 031924 59 ---GTVLLYSWGYFK---DCSDRFVGLSPNSVDALL-KLDEDRVITGSENG--LISLVGILPNRIIQPIAEHSEY----- 124 (150)
Q Consensus 59 ---~~i~i~~~~~~~---~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~----- 124 (150)
..|++||+...+ +......+ +...+.... +++|++++++..++ .|+.||+.+++.......+...
T Consensus 214 ~~~~~i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 214 WEGTELKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp TTCEEEEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred CCCcEEEEEEECCCCcccccEEeCCC-CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence 379999986223 22222233 456677666 88999888888888 6666677666654444332221
Q ss_pred --ceeEEEEcCCccEEEeccc
Q 031924 125 --PIESLGIASVLCFINSGFL 143 (150)
Q Consensus 125 --~i~~~~~~~~~~~l~s~~~ 143 (150)
.+..++|+|+++++++++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS
T ss_pred cccCceEeEeCCCEEEEEEEc
Confidence 1567899999999888765
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.57 E-value=6.3e-13 Score=88.89 Aligned_cols=143 Identities=6% Similarity=-0.062 Sum_probs=93.8
Q ss_pred CeeecCcce--EEEEc-------------CCCeEEEEEcC-CCeeeeeec----cCCCcEEEEEEEeCCCEEEeecC-CC
Q 031924 1 MTFAADAMK--LLGTS-------------GDGTLSVCNLR-KNTVQTRSE----FSEEELTSVVLMKNGRKVVCGSQ-SG 59 (150)
Q Consensus 1 i~~~~~~~~--l~~~~-------------~d~~i~i~d~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-d~ 59 (150)
++|+|++++ ++++. .++.+.+|++. .++....+. .+...+.+++|+|+|+++++++. ++
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~ 167 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTAN 167 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCC
Confidence 468999994 44553 68899999997 455443332 24567899999999998887654 67
Q ss_pred eEEEEEccccccc--ccccccc-cccceeEee-ecCCCEEEEecC-CCcEEEEecc--CCeee------eeccCC-CC-c
Q 031924 60 TVLLYSWGYFKDC--SDRFVGL-SPNSVDALL-KLDEDRVITGSE-NGLISLVGIL--PNRII------QPIAEH-SE-Y 124 (150)
Q Consensus 60 ~i~i~~~~~~~~~--~~~~~~~-~~~~v~~~~-~~~~~~l~~~~~-dg~i~~~d~~--~~~~~------~~~~~~-~~-~ 124 (150)
.|++|++...++. ...+... +...+..+. +++|+++++++. ++.|.+|++. +++.. ..+... .+ .
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 9999998522222 2222210 234456665 899998877664 7899999765 45432 222211 01 1
Q ss_pred -------ceeEEE-EcCCccEEEeccc
Q 031924 125 -------PIESLG-IASVLCFINSGFL 143 (150)
Q Consensus 125 -------~i~~~~-~~~~~~~l~s~~~ 143 (150)
.+..++ |+|||++|+++..
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred cccccccccccEEEECCCCCEEEEECC
Confidence 278899 9999998876554
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.56 E-value=1.4e-13 Score=92.25 Aligned_cols=138 Identities=9% Similarity=0.001 Sum_probs=98.5
Q ss_pred eeecCcceEEEEcC-CC--eEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc
Q 031924 2 TFAADAMKLLGTSG-DG--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 2 ~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
+|+||++.|+.++. ++ .|.+||+.+++.......+...+..+.|+|+|+.|+.++.++.+++||+.. ++.......
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-g~~~~~~~~ 120 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLAT-LEENVVYQV 120 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTT-CCEEEEEEC
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCC-Ccceeeeec
Confidence 58999999988876 66 488899998877665555555555678999999999999999999999863 333333333
Q ss_pred cccccee---EeeecCCCEEEEe----------------------cCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcC
Q 031924 79 LSPNSVD---ALLKLDEDRVITG----------------------SENGLISLVGILPNRIIQPIAEHSEYPIESLGIAS 133 (150)
Q Consensus 79 ~~~~~v~---~~~~~~~~~l~~~----------------------~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~ 133 (150)
+...+. ...+++++.++.. ..+..|++||+.+++..... .+.. .+..++|+|
T Consensus 121 -~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~-~~~~~~~sp 197 (388)
T 3pe7_A 121 -PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQ-WLGHPIYRP 197 (388)
T ss_dssp -CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESS-CEEEEEEET
T ss_pred -hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCc-cccccEECC
Confidence 333332 2237788877642 24468999999887654443 4445 488999999
Q ss_pred -CccEEEeccc
Q 031924 134 -VLCFINSGFL 143 (150)
Q Consensus 134 -~~~~l~s~~~ 143 (150)
||+.|+....
T Consensus 198 ~dg~~l~~~~~ 208 (388)
T 3pe7_A 198 YDDSTVAFCHE 208 (388)
T ss_dssp TEEEEEEEEEC
T ss_pred CCCCEEEEEEe
Confidence 9998876654
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.56 E-value=1.2e-13 Score=99.97 Aligned_cols=135 Identities=13% Similarity=0.040 Sum_probs=93.9
Q ss_pred eeecCcceEEEEcCC---------CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccc
Q 031924 2 TFAADAMKLLGTSGD---------GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~ 72 (150)
.||||+++|+.++.+ +.+.+||+++++.. .+..+...+...+|||||+.|+.+ .++.|++|+... +..
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~-~~~ 144 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPN-LPS 144 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTT-SCC
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCC-Cce
Confidence 579999999998776 56679999998754 456667789999999999999887 568999999853 222
Q ss_pred cc-ccccccccce-----------------eEee-ecCCCEEEEecCCC-------------------------------
Q 031924 73 SD-RFVGLSPNSV-----------------DALL-KLDEDRVITGSENG------------------------------- 102 (150)
Q Consensus 73 ~~-~~~~~~~~~v-----------------~~~~-~~~~~~l~~~~~dg------------------------------- 102 (150)
.+ +..+ +...+ ..+. +|+|+.|+..+.|.
T Consensus 145 ~~lt~~g-~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 145 YRITWTG-KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp EECCSCC-BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred EEEcCCC-CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 21 1122 22222 1244 89999988875321
Q ss_pred -----cEEEEeccC---C---eeeeecc-----CCCCcceeEEEEcCCccEEEec
Q 031924 103 -----LISLVGILP---N---RIIQPIA-----EHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 103 -----~i~~~d~~~---~---~~~~~~~-----~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
.+++||+.+ + +...... .+... +..++|+|||+.++..
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~wspdg~~~~~~ 277 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY-LCDVTWATQERISLQW 277 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEE-EEEEEEEETTEEEEEE
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeE-EEEEEEeCCCeEEEEE
Confidence 478889887 6 3322221 25554 8999999999966543
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.53 E-value=2.2e-12 Score=83.36 Aligned_cols=142 Identities=8% Similarity=0.061 Sum_probs=101.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeec--cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
|+++|+++++++...++.|.+||.. ++....+. .+...+..++++++|+.+++...++.|++||.. ++....+..
T Consensus 126 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~ 202 (286)
T 1q7f_A 126 VTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE--GQYLRQIGG 202 (286)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT--CCEEEEESC
T ss_pred EEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC--CCEEEEEcc
Confidence 4678899888887788999999965 44544443 334568999999999988887888999999974 344444432
Q ss_pred c-cccceeEee-ecCCCEEEEecCCC-cEEEEeccCCeeeeeccCCCC-cceeEEEEcCCccEEEeccccccc
Q 031924 79 L-SPNSVDALL-KLDEDRVITGSENG-LISLVGILPNRIIQPIAEHSE-YPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 79 ~-~~~~v~~~~-~~~~~~l~~~~~dg-~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
. +......++ .++|+++++...++ .|++||. +++.+..+..+.. ..+..++++|+|+++++. .+..|
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~-~~~~v 273 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLAS-KDYRL 273 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEE-TTTEE
T ss_pred CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEEC-CCCeE
Confidence 0 224556666 78899888888776 9999996 4555555544322 137789999999988874 45444
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.53 E-value=2.1e-12 Score=85.33 Aligned_cols=145 Identities=10% Similarity=-0.039 Sum_probs=103.3
Q ss_pred CeeecCcceEEEEcCC------------------------CeEEEEEcCCCeeeeeec-cCCCcEEEEEEEeCCCEEEee
Q 031924 1 MTFAADAMKLLGTSGD------------------------GTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCG 55 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d------------------------~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 55 (150)
|+++|+++++++...+ +.|.+||..+++...... .+......++++++|+.+++.
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d 108 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTD 108 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEE
Confidence 4789999998888776 479999998888765543 344578999999999988888
Q ss_pred cCCCeEEEEEcccccccccccc---------cccccceeEee-ec-CCCEEEEec-CCCcEEEEeccCCeeeeeccCCCC
Q 031924 56 SQSGTVLLYSWGYFKDCSDRFV---------GLSPNSVDALL-KL-DEDRVITGS-ENGLISLVGILPNRIIQPIAEHSE 123 (150)
Q Consensus 56 ~~d~~i~i~~~~~~~~~~~~~~---------~~~~~~v~~~~-~~-~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~ 123 (150)
..++.|++|+.......+..+. . +......+. .+ +++++++.+ .++.|++|+. +++.+..+.....
T Consensus 109 ~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~-~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~ 186 (329)
T 3fvz_A 109 VALHQVFKLDPHSKEGPLLILGRSMQPGSDQN-HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESS 186 (329)
T ss_dssp TTTTEEEEECTTCSSCCSEEESBTTBCCCSTT-CCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECC
T ss_pred CCCCEEEEEeCCCCeEEEEEecccCCCCCCcc-ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCC
Confidence 8899999999742211333331 2 233455666 77 788888886 6899999994 5666665532111
Q ss_pred ---------cceeEEEEcCC-ccEEEeccccccc
Q 031924 124 ---------YPIESLGIASV-LCFINSGFLSLNV 147 (150)
Q Consensus 124 ---------~~i~~~~~~~~-~~~l~s~~~~~~v 147 (150)
.....++++|+ ++++++...+..|
T Consensus 187 ~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I 220 (329)
T 3fvz_A 187 GSSPRPGQFSVPHSLALVPHLDQLCVADRENGRI 220 (329)
T ss_dssp SSSCCTTEESCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCCCcccCCCcEEEEECCCCEEEEEECCCCEE
Confidence 12788999998 7887776665544
No 168
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=8.4e-13 Score=87.93 Aligned_cols=129 Identities=7% Similarity=0.058 Sum_probs=86.3
Q ss_pred CeeecCcceEEEEc-CCCeEEEEEcCCCee--eeee---ccCCCcEEEEEEEeCCCEEEeecC--CCeEEEEEccc-ccc
Q 031924 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNTV--QTRS---EFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGY-FKD 71 (150)
Q Consensus 1 i~~~~~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~---~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~~~~~-~~~ 71 (150)
++|+|+++++++++ .++.|.+|++.+++. +..+ ..+......++|+|+|++|+++.. ++.+.+|++.. .++
T Consensus 216 ~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 216 LIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT 295 (361)
T ss_dssp EEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC
T ss_pred EEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc
Confidence 47999999887776 689999999987754 2222 222345689999999999877665 48999999852 222
Q ss_pred --cccccccccccceeEee-ecCCCEEEEec-CCCcEEEEe--ccCCeeeeecc-CCCCcceeEEEEc
Q 031924 72 --CSDRFVGLSPNSVDALL-KLDEDRVITGS-ENGLISLVG--ILPNRIIQPIA-EHSEYPIESLGIA 132 (150)
Q Consensus 72 --~~~~~~~~~~~~v~~~~-~~~~~~l~~~~-~dg~i~~~d--~~~~~~~~~~~-~~~~~~i~~~~~~ 132 (150)
.+..+.. ...+..+. +|++++|++++ .++.|.+|+ ..+++...... .+.. .+.++.|.
T Consensus 296 ~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~-~p~~v~~~ 360 (361)
T 3scy_A 296 LTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVD-KPVCLKFV 360 (361)
T ss_dssp EEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECS-SEEEEEEE
T ss_pred EEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCC-CCeEEEEc
Confidence 2223322 23445555 89999887776 578999964 44666544332 2223 47788875
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.52 E-value=3.7e-13 Score=96.09 Aligned_cols=139 Identities=10% Similarity=-0.053 Sum_probs=96.1
Q ss_pred ecCcce-EEEEcC-CCeEEEEEcC--C-Ceeeeeecc-----CCCcEEEEEEEeCCCEEEeecCC----------CeEEE
Q 031924 4 AADAMK-LLGTSG-DGTLSVCNLR--K-NTVQTRSEF-----SEEELTSVVLMKNGRKVVCGSQS----------GTVLL 63 (150)
Q Consensus 4 ~~~~~~-l~~~~~-d~~i~i~d~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~i 63 (150)
|||++. |+.++. +..|.++++. . ++ ...+.. +...+..++|+|||+.|+.++.+ ..|++
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 399998 776653 5677777766 2 43 334444 45678899999999999988766 58999
Q ss_pred EEccccc----ccccccc-cccccceeEee-ecCCCEEEEecCC--------CcEEEEecc-CC---eeeeeccCCCCcc
Q 031924 64 YSWGYFK----DCSDRFV-GLSPNSVDALL-KLDEDRVITGSEN--------GLISLVGIL-PN---RIIQPIAEHSEYP 125 (150)
Q Consensus 64 ~~~~~~~----~~~~~~~-~~~~~~v~~~~-~~~~~~l~~~~~d--------g~i~~~d~~-~~---~~~~~~~~~~~~~ 125 (150)
||+.... .....+. . +...+.... +|+|+.|+..+.+ ..|++||+. ++ +.......+.. .
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~-~ 243 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDD-AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE-A 243 (662)
T ss_dssp EETTSTTTTCGGGSEESSCS-CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB-C
T ss_pred EECCCCccccCCceeEEEec-CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc-e
Confidence 9986310 2233444 4 445555555 8999999877754 379999998 56 44333333445 5
Q ss_pred eeEEEEcCCccEEEeccccc
Q 031924 126 IESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 126 i~~~~~~~~~~~l~s~~~~~ 145 (150)
+..++|+|||++++++..++
T Consensus 244 ~~~~~~spdg~l~~~~~~~~ 263 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTG 263 (662)
T ss_dssp EEEEEECTTSCEEEEECTTS
T ss_pred EcceEECCCCeEEEEECCCC
Confidence 89999999999888776655
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.50 E-value=2.2e-12 Score=86.43 Aligned_cols=137 Identities=10% Similarity=-0.013 Sum_probs=94.9
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEE--EEeCCCEEEe----------------------ecC
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVV--LMKNGRKVVC----------------------GSQ 57 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~----------------------~~~ 57 (150)
.|+||++.|+.++.++.|++||+.+++.......+...+.... ++++++.++. ...
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCC
Confidence 6999999999999999999999999876655555555554444 4788988873 234
Q ss_pred CCeEEEEEcccccccccccccccccceeEee-ec-CCCEEEEecCC------CcEEEEeccCCeeeeeccCCCC-cceeE
Q 031924 58 SGTVLLYSWGYFKDCSDRFVGLSPNSVDALL-KL-DEDRVITGSEN------GLISLVGILPNRIIQPIAEHSE-YPIES 128 (150)
Q Consensus 58 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~-~~i~~ 128 (150)
+..|.+||+.. ++ ...+.. +...+.... +| +++.|+....+ ..|.++|...++. ..+..+.. ..+..
T Consensus 167 ~~~l~~~d~~~-g~-~~~l~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 167 CCRLMRVDLKT-GE-STVILQ-ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTH 242 (388)
T ss_dssp CEEEEEEETTT-CC-EEEEEE-ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEE
T ss_pred cceEEEEECCC-Cc-eEEeec-CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCccccc
Confidence 57888999853 33 333444 555566665 88 89888776653 3788888765544 33333332 24778
Q ss_pred EEEcCCccEEEecc
Q 031924 129 LGIASVLCFINSGF 142 (150)
Q Consensus 129 ~~~~~~~~~l~s~~ 142 (150)
++|+|||+.|+..+
T Consensus 243 ~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 243 EFWVPDGSALVYVS 256 (388)
T ss_dssp EEECTTSSCEEEEE
T ss_pred ceECCCCCEEEEEe
Confidence 99999999876544
No 171
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=5.4e-13 Score=89.76 Aligned_cols=132 Identities=9% Similarity=0.091 Sum_probs=92.7
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe---------eee-eeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT---------VQT-RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK 70 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~ 70 (150)
+++++...++++++.+ .+.+|+++..+ ... ....... |..++| ++++|+++ .++.|++||++...
T Consensus 43 Lais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~ 117 (388)
T 1xip_A 43 LDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS 117 (388)
T ss_dssp EEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT
T ss_pred EEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh
Confidence 4678888899999887 67779865432 111 1223455 999999 89999998 88999999986543
Q ss_pred ccccccccccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEeccccccc
Q 031924 71 DCSDRFVGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 71 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
....... +...+..+..... .+++++.||.+.+||+..++... +.. .|++++|+|+| ++.|..++.+
T Consensus 118 -~~~~~~~-~~~~v~~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~----~~~-~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 118 -EFRTVTS-FEKPVFQLKNVNN-TLVILNSVNDLSALDLRTKSTKQ----LAQ-NVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp -CEEEEEE-CSSCEEEEEECSS-EEEEEETTSEEEEEETTTCCEEE----EEE-SEEEEEECSSE--EEEEETTSCE
T ss_pred -ccCccce-eecceeeEEecCC-CEEEEECCCCEEEEEccCCcccc----ccC-CceEEEEcCCc--eEEEEcCCcE
Confidence 2233444 5566666542222 38888999999999998776643 223 59999999999 4556666654
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.50 E-value=1.8e-12 Score=85.67 Aligned_cols=144 Identities=9% Similarity=0.007 Sum_probs=101.3
Q ss_pred Ceeec-CcceEEEEc-CCCeEEEEEcCCCeeeeeecc----------CCCcEEEEEEEeC-CCEEEeecCCCeEEEEEcc
Q 031924 1 MTFAA-DAMKLLGTS-GDGTLSVCNLRKNTVQTRSEF----------SEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWG 67 (150)
Q Consensus 1 i~~~~-~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~~~~ 67 (150)
|+++| +++++++.+ .++.|++|+ ..++.+..+.. +......++++|+ +..+++...++.|++|+..
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 46888 777777776 689999999 45666555432 1234789999998 7777777888999999985
Q ss_pred cccccccccc--cccccceeEee-ec------CCCEEEEecCCCcEEEEeccCCeeeeecc---CCCCcceeEEEEcCCc
Q 031924 68 YFKDCSDRFV--GLSPNSVDALL-KL------DEDRVITGSENGLISLVGILPNRIIQPIA---EHSEYPIESLGIASVL 135 (150)
Q Consensus 68 ~~~~~~~~~~--~~~~~~v~~~~-~~------~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~~~~~ 135 (150)
.++.+..+. . +...+..+. .| +++..++...+..|++|+..+++.+..+. .+.. .+..++++|+|
T Consensus 227 -~G~~~~~~~~~~-~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~-~p~~ia~~~dG 303 (329)
T 3fvz_A 227 -TKEFVREIKHAS-FGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFD-MPHDIVASEDG 303 (329)
T ss_dssp -TCCEEEEECCTT-TTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCS-SEEEEEECTTS
T ss_pred -CCcEEEEEeccc-cCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccC-CeeEEEECCCC
Confidence 345555553 2 334455555 45 33333333445689999999998888773 3444 48899999999
Q ss_pred cEEEecccccccc
Q 031924 136 CFINSGFLSLNVN 148 (150)
Q Consensus 136 ~~l~s~~~~~~v~ 148 (150)
.++++...+..|.
T Consensus 304 ~lyvad~~~~~I~ 316 (329)
T 3fvz_A 304 TVYIGDAHTNTVW 316 (329)
T ss_dssp EEEEEESSSCCEE
T ss_pred CEEEEECCCCEEE
Confidence 9888887776654
No 173
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.47 E-value=3e-12 Score=86.21 Aligned_cols=126 Identities=10% Similarity=-0.009 Sum_probs=94.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
|+| +++.|+++ .++.|++||+.+.........++..+.++.+.+. .+++++.||.+.+||+... ... . +
T Consensus 93 l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~-~~~----~-~ 161 (388)
T 1xip_A 93 VCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTK-STK----Q-L 161 (388)
T ss_dssp EEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTC-CEE----E-E
T ss_pred EEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCC-ccc----c-c
Confidence 356 88899998 8899999999876544445556667888776654 3888899999999999633 222 1 3
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCee--eeec------c---CCCCcceeEEEEcCCccEEEe
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRI--IQPI------A---EHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~------~---~~~~~~i~~~~~~~~~~~l~s 140 (150)
...+++++ +++| ++.|..||.+++|+...++. ...+ . .|.. .|.++.|.+++.++++
T Consensus 162 ~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~-~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 162 AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEY-SPLSVTILSPQDFLAV 230 (388)
T ss_dssp EESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTS-EEEEEEESSSSEEEEE
T ss_pred cCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCe-eEEEEEEecCCeEEEE
Confidence 45688888 8888 67789999999999877664 4444 2 2444 6999999999999886
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=2.9e-12 Score=92.42 Aligned_cols=137 Identities=7% Similarity=0.003 Sum_probs=91.1
Q ss_pred eeecCcceEEEEcCCC-----eEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCe----------------
Q 031924 2 TFAADAMKLLGTSGDG-----TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGT---------------- 60 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------------- 60 (150)
+||||+++|+.+..++ .|++||+.+++........ ..+..++|+|||+.|+.++.++.
T Consensus 131 ~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQK 209 (710)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCE
Confidence 6999999998765432 8999999999765432222 22567899999999988877665
Q ss_pred EEEEEcccccc---cccccccccccceeEee-ecCCCEEEEecC-----CCcEEEEeccC------Ce-eeeeccCCCCc
Q 031924 61 VLLYSWGYFKD---CSDRFVGLSPNSVDALL-KLDEDRVITGSE-----NGLISLVGILP------NR-IIQPIAEHSEY 124 (150)
Q Consensus 61 i~i~~~~~~~~---~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~-----dg~i~~~d~~~------~~-~~~~~~~~~~~ 124 (150)
|++|++..... .+..... ++..+.... +++|++|+..+. +..|++||+.+ +. ....+..+..
T Consensus 210 v~~~~l~t~~~~~~~v~~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~- 287 (710)
T 2xdw_A 210 LYYHVLGTDQSEDILCAEFPD-EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE- 287 (710)
T ss_dssp EEEEETTSCGGGCEEEECCTT-CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-
T ss_pred EEEEECCCCcccceEEeccCC-CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-
Confidence 99999864321 1112222 333344554 899998887664 56899999976 42 3445545544
Q ss_pred ceeEEEEcCCccEEEecc
Q 031924 125 PIESLGIASVLCFINSGF 142 (150)
Q Consensus 125 ~i~~~~~~~~~~~l~s~~ 142 (150)
.+.. .|+|+|..|+..+
T Consensus 288 ~~~~-~~s~dg~~l~~~s 304 (710)
T 2xdw_A 288 GEYD-YVTNEGTVFTFKT 304 (710)
T ss_dssp SCEE-EEEEETTEEEEEE
T ss_pred cEEE-EEeccCCEEEEEE
Confidence 2443 5888887666544
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.43 E-value=2.6e-11 Score=79.82 Aligned_cols=135 Identities=12% Similarity=0.113 Sum_probs=91.6
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCC----CeEEEEEccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----GTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~ 76 (150)
++|+|++++++++..++.|.+||.++++.......+...+.+++++++|+.+++...+ +.|.+||... +.....+
T Consensus 50 ~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~-~~~~~~~ 128 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG-DNLQDII 128 (333)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS-CSCEEEE
T ss_pred cEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC-CEEEEEE
Confidence 3688999988888889999999998887654443456789999999999887777666 6899999753 2222122
Q ss_pred c--cccccceeEee-ecCCCEEEEecC------CCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEE
Q 031924 77 V--GLSPNSVDALL-KLDEDRVITGSE------NGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFIN 139 (150)
Q Consensus 77 ~--~~~~~~v~~~~-~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (150)
. . ....+..+. .++++++++... .+.|..+|..+++..... .... .+..++|+|+|+.+.
T Consensus 129 ~~~~-~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~-~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 129 EDLS-TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNIS-VANGIALSTDEKVLW 197 (333)
T ss_dssp CSSS-SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEES-SEEEEEECTTSSEEE
T ss_pred ccCc-cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCC-cccceEECCCCCEEE
Confidence 1 2 234566666 788888777654 356666676554433222 2223 378899999998543
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=7.5e-12 Score=80.92 Aligned_cols=135 Identities=13% Similarity=0.063 Sum_probs=101.0
Q ss_pred CcceEEEEcCCCeEEEEEcCCCeeeeeeccCC-CcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc-ccc
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-EELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS-PNS 83 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~~~ 83 (150)
.+++|++++.++.|.+||.++++.+.++..+. ..+.++.+.|+|+.++ +.++.+..||. .++.+.++.. . ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~--~G~~~W~~~~-~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR--DGRELWNIAA-PAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT--TSCEEEEEEC-CTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC--CCCEEEEEcC-CCCcc
Confidence 45789999999999999999999998887665 4688999999999888 35778999997 3567777664 3 234
Q ss_pred eeEee-ecCCCEEEEecC-CCcEEEEeccCCeeeeeccC------CCCcceeEEEEcCCccEEEeccccccc
Q 031924 84 VDALL-KLDEDRVITGSE-NGLISLVGILPNRIIQPIAE------HSEYPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 84 v~~~~-~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
+.+.. .++|+.+++.+. ++.+..+|. +++.+..+.. +.. ....+++.++|+++++...++.|
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~-~~~~v~~~~~G~~lv~~~~~~~v 148 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHA-QFRQINKNKKGNYLVPLFATSEV 148 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGG-SCSCCEECTTSCEEEEETTTTEE
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccc-cccCceECCCCCEEEEecCCCEE
Confidence 55555 789999998877 778888886 5666555431 111 35566788999999887766554
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.41 E-value=3.6e-11 Score=77.64 Aligned_cols=138 Identities=9% Similarity=0.094 Sum_probs=97.6
Q ss_pred ee-ecCcceEEEEcC-CCeEEEEEcCCCeeeeeec-cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccc-
Q 031924 2 TF-AADAMKLLGTSG-DGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV- 77 (150)
Q Consensus 2 ~~-~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~- 77 (150)
++ .++++++++... ++.|.+|| .+++.+..+. .+...+.+++++++|+.+++...++.|.+||.. ++....+.
T Consensus 83 ~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~ 159 (286)
T 1q7f_A 83 AVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GNVLHKFGC 159 (286)
T ss_dssp EEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEEC
T ss_pred EEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC--CCEEEEeCC
Confidence 45 356666666533 88999999 5566655553 334578999999999988887788999999964 34444442
Q ss_pred -cccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCC--CcceeEEEEcCCccEEEeccccc
Q 031924 78 -GLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHS--EYPIESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 78 -~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~s~~~~~ 145 (150)
. +...+..+. .++++++++...++.|++||.. ++.+..+..+. . .+..++++++|+++++...+.
T Consensus 160 ~~-~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~-~p~~i~~d~~G~l~v~~~~~~ 228 (286)
T 1q7f_A 160 SK-HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITN-YPIGVGINSNGEILIADNHNN 228 (286)
T ss_dssp TT-TCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSC-SEEEEEECTTCCEEEEECSSS
T ss_pred CC-ccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccC-CCcEEEECCCCCEEEEeCCCC
Confidence 2 334456666 7788888888889999999984 55555554332 3 488999999999888876553
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=2.6e-11 Score=77.55 Aligned_cols=145 Identities=6% Similarity=-0.093 Sum_probs=98.9
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
|+++|+++++++...++.|.+|+..+.............+.+++++++|+.+++...++.|.+|+.... ........ +
T Consensus 113 i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~-~ 190 (270)
T 1rwi_B 113 LAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-NQVVLPFT-D 190 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC-CEEECCCS-S
T ss_pred eEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC-ceEeeccc-C
Confidence 467888887777777889999976654333222233346788999999987777777889999997532 22221122 2
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
......+. .++|+++++...++.|..|+............+.. .+..++++++|+++++...++.|.
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLN-TPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCS-CEEEEEECTTCCEEEEEGGGTEEE
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCC-CceeEEECCCCCEEEEECCCCEEE
Confidence 24456666 77888888887889999999865543322222223 488999999999888877776654
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=4e-11 Score=77.54 Aligned_cols=138 Identities=6% Similarity=-0.079 Sum_probs=100.9
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccC-CCcEEEEEEEeCCCEEEeecC-CCeEEEEEcccccccccccccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYFKDCSDRFVGL 79 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~ 79 (150)
.++|++++++ +.++.|..||. +++.+.++... ...+.++.+.++|+.+++.+. ++.+..+|. .++.+.++...
T Consensus 43 ~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~--~Gk~l~~~~~~ 117 (276)
T 3no2_A 43 AATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM--KGEVLSKTEFE 117 (276)
T ss_dssp EECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT--TSCEEEEEEEC
T ss_pred EECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC--CCCEEEEEecc
Confidence 5678999888 35778999998 78888877764 357889999999999998877 777777775 35554444310
Q ss_pred -----cccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEeccccccc
Q 031924 80 -----SPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 80 -----~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
+......+. .++|+++++...++.|..||.. ++.+..+... . .+..+...++|+++++++....|
T Consensus 118 ~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~-~~~~~~~~~~g~~~v~~~~~~~v 188 (276)
T 3no2_A 118 TGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-G-TPFSSAFLDNGDCLVACGDAHCF 188 (276)
T ss_dssp CSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-S-CCCEEEECTTSCEEEECBTTSEE
T ss_pred CCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-C-CccceeEcCCCCEEEEeCCCCeE
Confidence 111222233 6789999999999999999997 8888887554 3 35567788999988877665433
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.38 E-value=2e-11 Score=80.73 Aligned_cols=133 Identities=14% Similarity=0.101 Sum_probs=88.8
Q ss_pred CeeecCcceEEEEcC---------------------------CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEE
Q 031924 1 MTFAADAMKLLGTSG---------------------------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV 53 (150)
Q Consensus 1 i~~~~~~~~l~~~~~---------------------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 53 (150)
+.|+||++.|+.++. ...|.+||+.+++.+..+.. . .+..+.|+|+| .++
T Consensus 109 ~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 109 LEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVV 185 (347)
T ss_dssp EEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEE
T ss_pred eeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEE
Confidence 369999998888763 25799999998876344444 3 77899999999 777
Q ss_pred eecCCC-------eEEEEEcccccccccccccccccceeEeeecCCCEEEEecCC--------CcEEEEeccCCeeeeec
Q 031924 54 CGSQSG-------TVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSEN--------GLISLVGILPNRIIQPI 118 (150)
Q Consensus 54 ~~~~d~-------~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~~ 118 (150)
++..++ ...+|.+. .++ ...+.. + ..+... +|+|+.|+..+.+ ..|++|| +++.....
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~-~-~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE-DGK-EEKMFE-K-VSFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE-TTE-EEEEEE-E-ESEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred EEecccccccccccccEEEeC-CCc-eEEecc-C-cceeeE-CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 775542 44566554 333 333444 4 344444 8899988776643 3688888 55554444
Q ss_pred cCCCCcceeE-EEEcCCccEEEecccccc
Q 031924 119 AEHSEYPIES-LGIASVLCFINSGFLSLN 146 (150)
Q Consensus 119 ~~~~~~~i~~-~~~~~~~~~l~s~~~~~~ 146 (150)
..+.. .+.. +.|+ |+ ++++++..+.
T Consensus 259 ~~~~~-~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 259 DEVDR-GVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp TTCCS-EEEEEEEET-TE-EEEEEEETTE
T ss_pred ccCCc-ccCCccEEc-Cc-EEEEEecCCc
Confidence 44445 5876 8999 88 8887766543
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.37 E-value=8.2e-11 Score=84.94 Aligned_cols=144 Identities=7% Similarity=-0.039 Sum_probs=96.7
Q ss_pred CeeecCcceEEEEcCCCe----------------EEEEEcCCCee----eeeeccCCCcEEEEEEEeCCCEEEeecC---
Q 031924 1 MTFAADAMKLLGTSGDGT----------------LSVCNLRKNTV----QTRSEFSEEELTSVVLMKNGRKVVCGSQ--- 57 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~----------------i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~--- 57 (150)
++|+||++.|+.++.++. |++|++.+++. +.....+...+..+.|+|||++|+..+.
T Consensus 176 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 255 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC 255 (710)
T ss_dssp EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS
T ss_pred EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC
Confidence 479999999998877655 99999988652 2222234456789999999999887654
Q ss_pred --CCeEEEEEccc------ccccccccccccccceeEeeecCCCEEEEecCC----CcEEEEeccCCe--eeeeccCCCC
Q 031924 58 --SGTVLLYSWGY------FKDCSDRFVGLSPNSVDALLKLDEDRVITGSEN----GLISLVGILPNR--IIQPIAEHSE 123 (150)
Q Consensus 58 --d~~i~i~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~--~~~~~~~~~~ 123 (150)
+..+++||+.. .......+.. +...+....+++|+.|+..+.. +.|.+||+.++. ..+.+..+..
T Consensus 256 ~~~~~l~~~d~~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 334 (710)
T 2xdw_A 256 DPVNRLWYCDLQQESNGITGILKWVKLID-NFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE 334 (710)
T ss_dssp SSCCEEEEEEGGGSSSSSCSSCCCEEEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred CCccEEEEEECcccccccCCccceEEeeC-CCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC
Confidence 56899999863 1113445555 5555555557777776655542 369999987653 2233333333
Q ss_pred -cceeEEEEcCCccEEEeccccc
Q 031924 124 -YPIESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 124 -~~i~~~~~~~~~~~l~s~~~~~ 145 (150)
..+..++|++++.++++...++
T Consensus 335 ~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 335 KDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp SCEEEEEEEETTTEEEEEEEETT
T ss_pred CCeEEEEEEEcCCEEEEEEEECC
Confidence 2488899998888888776554
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.36 E-value=1.1e-10 Score=82.31 Aligned_cols=112 Identities=8% Similarity=-0.005 Sum_probs=83.2
Q ss_pred cCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcc-cccccccccccccccc
Q 031924 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG-YFKDCSDRFVGLSPNS 83 (150)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~ 83 (150)
|.+.++++...+++|.++|..+++.+..+... ..+..+.++|||+++++++.++.|.+||+. ...+.+.++.. ...+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCC
Confidence 44556667778999999999999888777643 356799999999999999999999999984 23355556654 3333
Q ss_pred eeEeee----cCCCEEEEecC-CCcEEEEeccCCeeeeec
Q 031924 84 VDALLK----LDEDRVITGSE-NGLISLVGILPNRIIQPI 118 (150)
Q Consensus 84 v~~~~~----~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~ 118 (150)
.....+ |+|+++++++. ++.+.++|..+.+.++.+
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 322336 69988877765 589999998887766554
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.36 E-value=7.1e-11 Score=76.69 Aligned_cols=141 Identities=8% Similarity=-0.033 Sum_probs=94.4
Q ss_pred CeeecCcc-eEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccc--
Q 031924 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV-- 77 (150)
Q Consensus 1 i~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-- 77 (150)
++|+|+++ +++++..++.|..||..++ ...+..+...+.+++++++|+.+++...++.|.+||... ++......
T Consensus 33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~-g~~~~~~~~~ 109 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG-GEWESIADSF 109 (296)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT-CCEEEEECEE
T ss_pred CeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC-CcEEEEeecc
Confidence 36899998 7778888999999999877 445555667789999999999888777778999999742 33222111
Q ss_pred -cccccceeEee-ecCCCEEEE----ec-------------CCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE
Q 031924 78 -GLSPNSVDALL-KLDEDRVIT----GS-------------ENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 78 -~~~~~~v~~~~-~~~~~~l~~----~~-------------~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
......+..+. .++|+++++ ++ ..+.|..++.. ++. ..+..+.. ....++|+|+|+.+
T Consensus 110 ~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~-~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 110 EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRV-KPNGLAFLPSGNLL 186 (296)
T ss_dssp TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCS-SEEEEEECTTSCEE
T ss_pred CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCC-CCccEEECCCCCEE
Confidence 10112233454 788988887 33 13456666654 443 33334444 37889999999988
Q ss_pred Eeccccccc
Q 031924 139 NSGFLSLNV 147 (150)
Q Consensus 139 ~s~~~~~~v 147 (150)
++.+....|
T Consensus 187 v~~~~~~~i 195 (296)
T 3e5z_A 187 VSDTGDNAT 195 (296)
T ss_dssp EEETTTTEE
T ss_pred EEeCCCCeE
Confidence 666554443
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.36 E-value=5.2e-12 Score=84.68 Aligned_cols=139 Identities=8% Similarity=-0.124 Sum_probs=88.6
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEE-------------------EEEEeCCCEEEee-----cC
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTS-------------------VVLMKNGRKVVCG-----SQ 57 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~ 57 (150)
.|+||++.|+..+.++.|.+||+.+++.......+...... +.|+|+++.++.. ..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 87 FISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred eECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 58999999999988889999999988655444433332222 2456666655443 35
Q ss_pred CCeEEEEEcccccccccccccccccceeEee-ec-CCCEEEEecCC------CcEEEEeccCCeeeeeccCCCCcceeEE
Q 031924 58 SGTVLLYSWGYFKDCSDRFVGLSPNSVDALL-KL-DEDRVITGSEN------GLISLVGILPNRIIQPIAEHSEYPIESL 129 (150)
Q Consensus 58 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~i~~~ 129 (150)
+..|.+||+.. ++.. .+.. +...+.... +| +++.++..+.+ ..|++||+..++............+..+
T Consensus 167 ~~~l~~~d~~~-g~~~-~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 167 TCRLIKVDIET-GELE-VIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CEEEEEEETTT-CCEE-EEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred cceEEEEECCC-CcEE-eecc-CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 56888999853 3332 2223 455566655 77 67766655433 3688888866544333322113248889
Q ss_pred EEcCCccEEEeccc
Q 031924 130 GIASVLCFINSGFL 143 (150)
Q Consensus 130 ~~~~~~~~l~s~~~ 143 (150)
+|+|||++|+..+.
T Consensus 244 ~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 244 FWIPDGSAMAYVSY 257 (396)
T ss_dssp EECTTSSCEEEEEE
T ss_pred EECCCCCEEEEEec
Confidence 99999998776654
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.35 E-value=7.8e-11 Score=76.49 Aligned_cols=137 Identities=8% Similarity=0.009 Sum_probs=92.1
Q ss_pred CeeecCcceEEEE----c-------------CCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEE
Q 031924 1 MTFAADAMKLLGT----S-------------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (150)
Q Consensus 1 i~~~~~~~~l~~~----~-------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 63 (150)
++++|+++++++. . ..+.|..++.. ++. ..+.........++|+|+++.+++.+.++.|.+
T Consensus 120 i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~ 197 (296)
T 3e5z_A 120 VCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHR 197 (296)
T ss_dssp EEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEE
Confidence 3678899888863 2 13456666655 443 334445567789999999998877788899999
Q ss_pred EEccccccc---ccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEE-cCCccEE
Q 031924 64 YSWGYFKDC---SDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGI-ASVLCFI 138 (150)
Q Consensus 64 ~~~~~~~~~---~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l 138 (150)
|++...+.. ...+.. +...+..+. .++|+++++. ++.|.+|+.. ++.+..+..+.. +.+++| +|+++.|
T Consensus 198 ~~~~~~g~~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~--~~~~~f~~~d~~~L 271 (296)
T 3e5z_A 198 YCLNARGETEYQGVHFTV-EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT--TSNLCFGGPEGRTL 271 (296)
T ss_dssp EEECSSSCEEEEEEEECC-SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC--CCEEEEESTTSCEE
T ss_pred EEECCCCcCcCCCeEeeC-CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC--ceeEEEECCCCCEE
Confidence 998532332 122222 333344555 7788877666 7899999986 666677655543 788999 5888877
Q ss_pred Eeccccc
Q 031924 139 NSGFLSL 145 (150)
Q Consensus 139 ~s~~~~~ 145 (150)
..++..+
T Consensus 272 ~v~t~~~ 278 (296)
T 3e5z_A 272 YMTVSTE 278 (296)
T ss_dssp EEEETTE
T ss_pred EEEcCCe
Confidence 7666543
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.34 E-value=4.1e-12 Score=85.19 Aligned_cols=138 Identities=8% Similarity=-0.081 Sum_probs=88.8
Q ss_pred CeeecCcceEEEEcC---CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccc
Q 031924 1 MTFAADAMKLLGTSG---DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV 77 (150)
Q Consensus 1 i~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~ 77 (150)
++|+||+++|+.... +..|.+||+.+++..............+.|+|+|++|+..+.++.+++||+.. ++......
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-~~~~~~~~ 119 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLET-LEEQVIYT 119 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTT-CCEEEEEE
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCC-CCcEEEEe
Confidence 368999999877643 34788899988865443332222223378999999999988888999999853 33222222
Q ss_pred cccccceeE-------------------ee-ecCCCEEEEe-----cCCCcEEEEeccCCeeeeeccCCCCcceeEEEEc
Q 031924 78 GLSPNSVDA-------------------LL-KLDEDRVITG-----SENGLISLVGILPNRIIQPIAEHSEYPIESLGIA 132 (150)
Q Consensus 78 ~~~~~~v~~-------------------~~-~~~~~~l~~~-----~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~ 132 (150)
. +...... .. +|+++.++.. ..+..|++||+.+++..... .+.. .+..+.|+
T Consensus 120 ~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~-~~~~~~~s 196 (396)
T 3c5m_A 120 V-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTA-WLGHPIYR 196 (396)
T ss_dssp C-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESS-CEEEEEEE
T ss_pred c-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCc-ccccceEC
Confidence 2 2221111 12 4555555443 35568999999887755444 3444 48899999
Q ss_pred C-CccEEEecc
Q 031924 133 S-VLCFINSGF 142 (150)
Q Consensus 133 ~-~~~~l~s~~ 142 (150)
| +++.|+..+
T Consensus 197 p~dg~~l~~~~ 207 (396)
T 3c5m_A 197 PFDDSTVGFCH 207 (396)
T ss_dssp TTEEEEEEEEE
T ss_pred CCCCCEEEEEe
Confidence 9 888766554
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.33 E-value=1.8e-10 Score=76.06 Aligned_cols=137 Identities=8% Similarity=-0.036 Sum_probs=92.1
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCC-----CcEEEEEEEeCCCEEEeec--CCCeEEEEEcccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-----EELTSVVLMKNGRKVVCGS--QSGTVLLYSWGYFKDCS 73 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~d~~i~i~~~~~~~~~~ 73 (150)
|+++++++.+++...++.|.+||.++++....+.... .....+++ . +..++++. .++.|.++|..+ ++..
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t-~~~~ 165 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTET-DKVV 165 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTT-TEEE
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCC-CeEE
Confidence 4577888554444489999999999998776554322 14556777 4 44454444 488999999863 4555
Q ss_pred cccccccccceeEee-ecCCCEEEEecCC----------CcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecc
Q 031924 74 DRFVGLSPNSVDALL-KLDEDRVITGSEN----------GLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 74 ~~~~~~~~~~v~~~~-~~~~~~l~~~~~d----------g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~ 142 (150)
.++.. ... ...+. .++|++++++..+ +.|.++|..+++....+....+.....++++|+++.+..+.
T Consensus 166 ~~i~~-g~~-p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 166 DELTI-GIQ-PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEEEC-SSC-BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EEEEc-CCC-ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 55543 222 23344 7788877777655 78999999988877666433222488999999888766543
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.33 E-value=2.5e-10 Score=72.96 Aligned_cols=143 Identities=8% Similarity=-0.032 Sum_probs=95.2
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
|+++++++++++.. ++.|.+||................+..++++++|+.+++...++.|.+|+.... ........ .
T Consensus 72 i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~-~ 148 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK-TQTVLPFT-G 148 (270)
T ss_dssp EEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC-SCEECCCC-S
T ss_pred eEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc-eeEeeccc-c
Confidence 46788888666665 889999998765433222223356899999999997777777889999975422 11111112 2
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEeccccccc
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
......+. .++++++++...++.|.+||............+.. .+..++++++|.++++...++.|
T Consensus 149 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~d~~g~l~v~~~~~~~v 215 (270)
T 1rwi_B 149 LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDIT-APWGIAVDEAGTVYVTEHNTNQV 215 (270)
T ss_dssp CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCC-SEEEEEECTTCCEEEEETTTSCE
T ss_pred CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCC-CceEEEECCCCCEEEEECCCCcE
Confidence 23344555 67888888777788999999876654433323323 48899999999887776555443
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.31 E-value=5.3e-11 Score=78.35 Aligned_cols=136 Identities=12% Similarity=0.078 Sum_probs=98.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 80 (150)
+.|++++..++..+.++.++.| .++....+..+...+.+++|+++|+.++++..++.|.+||... ++....... +
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-~~~~~~~~~-~ 85 (333)
T 2dg1_A 11 LFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET-KEIKRPFVS-H 85 (333)
T ss_dssp CCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT-CCEEEEEEC-S
T ss_pred eeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC-CcEEEEeeC-C
Confidence 4678888777777788888988 3445555566666789999999999888888899999999752 333222223 4
Q ss_pred ccceeEee-ecCCCEEEEecCC----CcEEEEeccCCeeeeecc--CCCCcceeEEEEcCCccEEEecc
Q 031924 81 PNSVDALL-KLDEDRVITGSEN----GLISLVGILPNRIIQPIA--EHSEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~s~~ 142 (150)
...+..+. .++++++++...+ +.|.+||..+++....+. .+.. .+..++++|+|+++++..
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAY-CIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCC-CEEEEEECTTSCEEEEEC
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCC-cccceEECCCCCEEEEec
Confidence 56677777 7888888877766 689999987766433332 2223 588999999999887654
No 190
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.29 E-value=4.3e-10 Score=75.29 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=89.7
Q ss_pred ecCcceEEEEcCCCeEEEEEcCCCee--eeeecc------CC----CcEEEEEEEeCCCEEEeecC-----------CCe
Q 031924 4 AADAMKLLGTSGDGTLSVCNLRKNTV--QTRSEF------SE----EELTSVVLMKNGRKVVCGSQ-----------SGT 60 (150)
Q Consensus 4 ~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~------~~----~~v~~~~~~~~~~~l~~~~~-----------d~~ 60 (150)
+|++..++..+.++.+.++|+...+. ...+.. .. .....++++|+++.+++... .+.
T Consensus 208 ~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~ 287 (361)
T 2oiz_A 208 ALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAE 287 (361)
T ss_dssp EECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSE
T ss_pred cccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCce
Confidence 45566666666788899999875432 111110 00 11112689999888776543 358
Q ss_pred EEEEEcccccccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCC--eeeeeccCCCCcceeEEEEcCCcc
Q 031924 61 VLLYSWGYFKDCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPN--RIIQPIAEHSEYPIESLGIASVLC 136 (150)
Q Consensus 61 i~i~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~~~~~~ 136 (150)
|.+||+. ..+.+.++.. +. ...+. +++|+++++++. +.|.+||..++ +.+..+..... ....++++|+|.
T Consensus 288 v~viD~~-t~~~v~~i~~-~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~-~P~~~~~~p~G~ 360 (361)
T 2oiz_A 288 IWVMDTK-TKQRVARIPG-RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAE-ASLQVQFHPVGG 360 (361)
T ss_dssp EEEEETT-TTEEEEEEEC-TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCS-SEEEEEECCCSC
T ss_pred EEEEECC-CCcEEEEEec-CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCC-CcEEEEecCCCC
Confidence 9999986 4477777776 55 66666 999999998887 99999999999 88888755545 478899999985
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.29 E-value=2.8e-10 Score=82.01 Aligned_cols=141 Identities=10% Similarity=-0.026 Sum_probs=91.0
Q ss_pred CeeecCcceEEEEcCCCe-------------EEEEEcCCCe----eeeeeccCCCcEEEEEEEeCCCEEEeecCCC----
Q 031924 1 MTFAADAMKLLGTSGDGT-------------LSVCNLRKNT----VQTRSEFSEEELTSVVLMKNGRKVVCGSQSG---- 59 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~-------------i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---- 59 (150)
++|+||++.|+.++.+.. |++|++.+++ .+.....+...+..+.|+|||++|+..+.++
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 252 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEN 252 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEE
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCce
Confidence 479999999999887765 9999998875 2333334445788999999999988776555
Q ss_pred eEEEEEcccccccccccccccccceeEeeecCCCEEEEec---CCCcEEEEeccCCee---eeeccCCCCcceeEEEEcC
Q 031924 60 TVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGS---ENGLISLVGILPNRI---IQPIAEHSEYPIESLGIAS 133 (150)
Q Consensus 60 ~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~---~dg~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~~~ 133 (150)
.+.+++.. ......+.. +.........+++++++... .++.|.+||+.+++. ...+..+....+..++|+
T Consensus 253 ~l~~~~~~--~~~~~~l~~-~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~- 328 (695)
T 2bkl_A 253 DVYWKRPG--EKDFRLLVK-GVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV- 328 (695)
T ss_dssp EEEEECTT--CSSCEEEEE-CSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-
T ss_pred EEEEEcCC--CCceEEeec-CCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-
Confidence 55555532 223344444 44444444446666444443 257899999876542 233333323358888888
Q ss_pred CccEEEeccccc
Q 031924 134 VLCFINSGFLSL 145 (150)
Q Consensus 134 ~~~~l~s~~~~~ 145 (150)
++.++++...++
T Consensus 329 ~~~lv~~~~~dg 340 (695)
T 2bkl_A 329 GGHLSLEYLKDA 340 (695)
T ss_dssp TTEEEEEEEETT
T ss_pred CCEEEEEEEECC
Confidence 667777765443
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.28 E-value=3.5e-11 Score=86.68 Aligned_cols=135 Identities=7% Similarity=-0.057 Sum_probs=86.2
Q ss_pred eeecCcceEEE-----EcCCCeEEEEEcCCCeee-eeeccCCCcEEEEEEEeCCCEEEeecCCCe-------------EE
Q 031924 2 TFAADAMKLLG-----TSGDGTLSVCNLRKNTVQ-TRSEFSEEELTSVVLMKNGRKVVCGSQSGT-------------VL 62 (150)
Q Consensus 2 ~~~~~~~~l~~-----~~~d~~i~i~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------i~ 62 (150)
+||||+++|+. |+.+.+|++||+.+++.+ ..... ......++|+|||+.|+.++.+.. |+
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~ 205 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE-GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIR 205 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS-CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEE
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC-cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEE
Confidence 68999999984 344578999999998754 21111 111267899999999998888765 99
Q ss_pred EEEcccccc---cccccccccccceeEee-ecCCCEEEEecCCC----cEEEEeccCCeeeeeccCCCCcceeEEEEcCC
Q 031924 63 LYSWGYFKD---CSDRFVGLSPNSVDALL-KLDEDRVITGSENG----LISLVGILPNRIIQPIAEHSEYPIESLGIASV 134 (150)
Q Consensus 63 i~~~~~~~~---~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg----~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~ 134 (150)
+|++..... .+..... +...+.... +++|++|+..+.++ .|++|+..+++. ..+..+.. .+....+ ++
T Consensus 206 ~~~l~t~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~-~~~~~~~-~~ 281 (695)
T 2bkl_A 206 YHTLGTEPSKDTVVHERTG-DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVG-AKYEVHA-WK 281 (695)
T ss_dssp EEETTSCGGGCEEEECCCC-CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSS-CCEEEEE-ET
T ss_pred EEECCCCchhceEEEecCC-CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCC-ceEEEEe-cC
Confidence 999864321 2222223 334555555 89999888877665 677777654443 33334444 3555555 55
Q ss_pred ccEEEec
Q 031924 135 LCFINSG 141 (150)
Q Consensus 135 ~~~l~s~ 141 (150)
|.+++..
T Consensus 282 g~l~~~s 288 (695)
T 2bkl_A 282 DRFYVLT 288 (695)
T ss_dssp TEEEEEE
T ss_pred CcEEEEE
Confidence 5544443
No 193
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.28 E-value=3.2e-10 Score=73.81 Aligned_cols=139 Identities=8% Similarity=-0.005 Sum_probs=89.8
Q ss_pred CeeecCcceEEEEcCC---------CeEEEEEcCC-CeeeeeeccCCCcEEEEEEEeCCCEE-EeecCCCeEEEEEcc-c
Q 031924 1 MTFAADAMKLLGTSGD---------GTLSVCNLRK-NTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWG-Y 68 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d---------~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~-~ 68 (150)
++++|+++++++.... ..-.+|.+.. ++.. .+.......+.++|+|+++.+ ++.+.++.|.+|++. .
T Consensus 103 i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~ 181 (297)
T 3g4e_A 103 GKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQ 181 (297)
T ss_dssp EEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTT
T ss_pred EEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCC
Confidence 3578888876655321 2234444432 3332 223333456899999999876 455667899999873 2
Q ss_pred cccc-----ccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEc-CCccEEEec
Q 031924 69 FKDC-----SDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIA-SVLCFINSG 141 (150)
Q Consensus 69 ~~~~-----~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~s~ 141 (150)
.+.. ...+.. .......+. .++|++.++....+.|..||..+++.+..+..+.. .+++++|. |+++.|..+
T Consensus 182 ~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~-~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 182 TGQISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD-KTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp TCCEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS-BEEEEEEESGGGCEEEEE
T ss_pred CCcccCcEEEEECCC-CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC-CceEEEEeCCCCCEEEEE
Confidence 2221 122222 234455666 77888888877788999999988888888866655 48999998 887755444
Q ss_pred c
Q 031924 142 F 142 (150)
Q Consensus 142 ~ 142 (150)
+
T Consensus 260 ~ 260 (297)
T 3g4e_A 260 C 260 (297)
T ss_dssp E
T ss_pred c
Confidence 3
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.26 E-value=8.2e-10 Score=72.94 Aligned_cols=133 Identities=5% Similarity=-0.036 Sum_probs=91.5
Q ss_pred cceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccc-----
Q 031924 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP----- 81 (150)
Q Consensus 7 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~----- 81 (150)
++.+++...++.|.+||.++++.+..+. .......++++++++..++...++.|.+||..+ ++...++.. ..
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t-~~~~~~i~~-g~~~~~~ 130 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT-YEITGYIEC-PDMDMES 130 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT-TEEEEEEEC-TTCCTTT
T ss_pred CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC-CeEEEEEEc-CCccccC
Confidence 4455566678999999999998877774 345678999999985444444889999999863 354444442 22
Q ss_pred cceeEeeecCCCEEEEec-CCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 82 NSVDALLKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 82 ~~v~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
.....+...+++++++.. .++.|.++|+.+++.+..+... . ....++++|+|++++++...
T Consensus 131 ~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~-~p~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 131 GSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-I-QPTSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp CBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-S-CBCCCEECTTSEEEEEBCCB
T ss_pred CCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-C-CccceEEcCCCCEEEEECCC
Confidence 022233333444555544 4889999999999887777543 2 36678999999988776543
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=4.2e-10 Score=73.35 Aligned_cols=139 Identities=8% Similarity=0.033 Sum_probs=92.0
Q ss_pred CeeecCcceEEEEcCC---------------CeEEEEEcCCCeeeeeeccCCCcEEEEEEE----eCCCEEEee-cCCCe
Q 031924 1 MTFAADAMKLLGTSGD---------------GTLSVCNLRKNTVQTRSEFSEEELTSVVLM----KNGRKVVCG-SQSGT 60 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~ 60 (150)
++++++++++++...+ +.|..||.. ++.... .........++++ ++++.++.+ ..++.
T Consensus 122 i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~ 199 (314)
T 1pjx_A 122 CAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK 199 (314)
T ss_dssp EEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEETTTTE
T ss_pred EEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-ccCCCCcceEEEecccCCCCCEEEEEECCCCe
Confidence 3577888877777554 567777765 544332 2233456889999 998766544 56789
Q ss_pred EEEEEcccccc-----cccccccccc-cceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcC
Q 031924 61 VLLYSWGYFKD-----CSDRFVGLSP-NSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIAS 133 (150)
Q Consensus 61 i~i~~~~~~~~-----~~~~~~~~~~-~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~ 133 (150)
|.+|+....++ ....+.. +. .....+. .++|+++++...++.|..||..+++.+..+..+.. .+.+++|+|
T Consensus 200 i~~~~~~~~g~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~i~~~~ 277 (314)
T 1pjx_A 200 LWSYDIKGPAKIENKKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE-KPSNLHFKP 277 (314)
T ss_dssp EEEEEEEETTEEEEEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS-CEEEEEECT
T ss_pred EEEEECCCCCccccceEEEECCC-CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC-CceeEEECC
Confidence 99999752222 1222332 22 3455565 77888888877888999999986766666655545 489999999
Q ss_pred CccE-EEeccc
Q 031924 134 VLCF-INSGFL 143 (150)
Q Consensus 134 ~~~~-l~s~~~ 143 (150)
+++. +++...
T Consensus 278 dg~~l~v~~~~ 288 (314)
T 1pjx_A 278 QTKTIFVTEHE 288 (314)
T ss_dssp TSSEEEEEETT
T ss_pred CCCEEEEEeCC
Confidence 9984 444433
No 196
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.24 E-value=4.1e-10 Score=75.35 Aligned_cols=111 Identities=11% Similarity=0.123 Sum_probs=80.6
Q ss_pred cCcceEEEEc------CCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec----------CCCeEEEEEccc
Q 031924 5 ADAMKLLGTS------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGY 68 (150)
Q Consensus 5 ~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~i~~~~~ 68 (150)
++++++++.. .|+.|.+||..+++.+..+.....+ .++|+|+|+++++++ .++.|.+||...
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 3667777653 3679999999999887777655444 899999999998876 367899999853
Q ss_pred ccccccccccccc------cceeEee-ecCCCEEEEecC--CCcEEEEeccCCeeeee-cc
Q 031924 69 FKDCSDRFVGLSP------NSVDALL-KLDEDRVITGSE--NGLISLVGILPNRIIQP-IA 119 (150)
Q Consensus 69 ~~~~~~~~~~~~~------~~v~~~~-~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~-~~ 119 (150)
.+...++.. .. .....+. +++|++++++.. ++.|.+||+.+++.+.. +.
T Consensus 91 -~~~~~~i~~-~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~ 149 (361)
T 2oiz_A 91 -LTFEKEISL-PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA 149 (361)
T ss_dssp -CCEEEEEEE-CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG
T ss_pred -CcEEEEEEc-CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec
Confidence 355555442 11 1222333 899999988764 57999999999988777 53
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.23 E-value=3.7e-09 Score=68.20 Aligned_cols=139 Identities=7% Similarity=-0.004 Sum_probs=94.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeee-eeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccc-cccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ-TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD-RFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~-~~~~ 78 (150)
|+++++++++++...++.|..||.. ++.. .........+.++++.++|+..++...++.+..||.. ++... ....
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~--g~~~~~~~~~ 138 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD--GKIREYELPN 138 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--CCEEEEECSS
T ss_pred EEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC--CCEEEecCCC
Confidence 3567888888887778899999986 4332 2222244578999999999888877778899999872 22221 1222
Q ss_pred ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeee-ccCCCCcceeEEEEcCCccEEEeccccc
Q 031924 79 LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~s~~~~~ 145 (150)
....+..+. .++++++++...++.|..||. +++.... ...... .+..++++++|++.++....+
T Consensus 139 -~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~ 204 (299)
T 2z2n_A 139 -KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPAS-GPVGITKGNDDALWFVEIIGN 204 (299)
T ss_dssp -TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTC-CEEEEEECTTSSEEEEETTTT
T ss_pred -CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCC-cceeEEECCCCCEEEEccCCc
Confidence 234456666 778888887777889999998 6654432 222333 488999999998777654433
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.23 E-value=2.1e-10 Score=75.82 Aligned_cols=125 Identities=10% Similarity=0.056 Sum_probs=85.0
Q ss_pred CcceEEEEc---------CCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCC---Ce--EEEEEcccccc
Q 031924 6 DAMKLLGTS---------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS---GT--VLLYSWGYFKD 71 (150)
Q Consensus 6 ~~~~l~~~~---------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~--i~i~~~~~~~~ 71 (150)
||+.++... .++.|.+||+.+++... + ..+..+.|+|||++|+..+.+ +. |.+|++. .++
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~-~g~ 96 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLE-TLS 96 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT-TTE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECC-CCc
Confidence 677776542 25689999998876432 3 457889999999998877643 34 6666764 233
Q ss_pred cccccccccccceeEee-ecCCCEEEEecCC---------------------------CcEEEEeccCCeeeeeccCCCC
Q 031924 72 CSDRFVGLSPNSVDALL-KLDEDRVITGSEN---------------------------GLISLVGILPNRIIQPIAEHSE 123 (150)
Q Consensus 72 ~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~d---------------------------g~i~~~d~~~~~~~~~~~~~~~ 123 (150)
... +.. ... +..+. +|+++.|+..+.+ ..|++||+.+++.+..+.. .
T Consensus 97 ~~~-l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~- 171 (347)
T 2gop_A 97 SKK-ILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P- 171 (347)
T ss_dssp EEE-EEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-
T ss_pred eEE-EEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-
Confidence 333 333 333 66666 8899988877632 5788999988876444433 2
Q ss_pred cceeEEEEcCCccEEEeccc
Q 031924 124 YPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 124 ~~i~~~~~~~~~~~l~s~~~ 143 (150)
.+..++|+||| +++++..
T Consensus 172 -~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 172 -RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp -TTCEEEEETTE-EEEEEEC
T ss_pred -CcccccCCCCe-EEEEEec
Confidence 48889999999 7776644
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.21 E-value=5.7e-09 Score=67.32 Aligned_cols=138 Identities=6% Similarity=-0.042 Sum_probs=94.2
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeee-eccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccc-ccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTR-SEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR-FVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~ 78 (150)
|+++|+++++++...++.|..||. +++.... .......+..+++.++|+..++...++.+..||. . ++.... ...
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~ 180 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S-GDITEFKIPT 180 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEEEEECSS
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C-CcEEEeeCCC
Confidence 356788888887777889999998 5544322 2233457899999999987777777789999987 2 332221 222
Q ss_pred ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeee-ccCCCCcceeEEEEcCCccEEEecccc
Q 031924 79 LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
....+..+. .++++++++...++.|..||. +++.... ...+.. .+..++++++|++.++...+
T Consensus 181 -~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 181 -PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNA-RPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp -TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC-CEEEEEECSTTCEEEEETTT
T ss_pred -CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCC-CceeEEECCCCCEEEeccCC
Confidence 334455666 678888777777889999998 6654332 222334 48899999999977765333
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.18 E-value=2.8e-10 Score=82.59 Aligned_cols=137 Identities=10% Similarity=0.017 Sum_probs=86.3
Q ss_pred eeecCcceEEEEcCC-----CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCe--------------EE
Q 031924 2 TFAADAMKLLGTSGD-----GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGT--------------VL 62 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~ 62 (150)
+||||+++|+.++.+ ..|++||+.+++.+... .+...+..++|+|| +.|+.+..++. |+
T Consensus 169 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~ 246 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVW 246 (741)
T ss_dssp EECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEE
Confidence 699999999876533 46999999998765431 11112357899999 88887776543 88
Q ss_pred EEEcccccc---cccccccccccceeEee-ecCCCEEEEecCCC-----cEEEEeccCC--eeeeeccCCCCcceeEEEE
Q 031924 63 LYSWGYFKD---CSDRFVGLSPNSVDALL-KLDEDRVITGSENG-----LISLVGILPN--RIIQPIAEHSEYPIESLGI 131 (150)
Q Consensus 63 i~~~~~~~~---~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~ 131 (150)
+|++.+... .+..... ++..+.... +++|++|+..+.++ .|++||+.++ +....+..+.. ..... +
T Consensus 247 ~~~lgt~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~-~ 323 (741)
T 1yr2_A 247 LHRLGTPQSADQPVFATPE-LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-AQWDF-V 323 (741)
T ss_dssp EEETTSCGGGCEEEECCTT-CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-SCEEE-E
T ss_pred EEECCCCchhCEEEeccCC-CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-ceEEE-E
Confidence 888753321 1111122 223355555 89999888776543 8999999776 31344444444 24444 3
Q ss_pred cCCccEEEeccc
Q 031924 132 ASVLCFINSGFL 143 (150)
Q Consensus 132 ~~~~~~l~s~~~ 143 (150)
+|+|+.|+..+.
T Consensus 324 ~~dg~~l~~~s~ 335 (741)
T 1yr2_A 324 DGVGDQLWFVSG 335 (741)
T ss_dssp EEETTEEEEEEC
T ss_pred eccCCEEEEEEC
Confidence 488877665543
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.16 E-value=6e-09 Score=75.71 Aligned_cols=141 Identities=16% Similarity=0.036 Sum_probs=89.6
Q ss_pred CeeecCcceEEEEcCCCe--------------EEEEEcCCCee----eeeeccCCCcEEEEEEEeCCCEEEeecCC----
Q 031924 1 MTFAADAMKLLGTSGDGT--------------LSVCNLRKNTV----QTRSEFSEEELTSVVLMKNGRKVVCGSQS---- 58 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~--------------i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---- 58 (150)
++|+|| +.|+.++.++. |.+|++.++.. +.....+...+..+.|+|||++|+..+.+
T Consensus 214 ~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 292 (741)
T 1yr2_A 214 LAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDP 292 (741)
T ss_dssp CEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCS
T ss_pred EEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCC
Confidence 479999 88888776543 88999877642 22222233358899999999998876644
Q ss_pred -CeEEEEEccccccc-ccccccccccceeEeeecCCCEEEEecC----CCcEEEEeccCC--eeeeeccCCCCcceeEEE
Q 031924 59 -GTVLLYSWGYFKDC-SDRFVGLSPNSVDALLKLDEDRVITGSE----NGLISLVGILPN--RIIQPIAEHSEYPIESLG 130 (150)
Q Consensus 59 -~~i~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~l~~~~~----dg~i~~~d~~~~--~~~~~~~~~~~~~i~~~~ 130 (150)
..+++||+...... ...+.. +.........++++.|+..+. ++.|.+||+.+. +....+..+.. .+..+.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~ 370 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIP-DLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVG 370 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEE
T ss_pred cceEEEEECCCCCCcccEEecC-CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEE
Confidence 38999998532112 444544 444444444678887777664 345999998764 33344444444 477777
Q ss_pred EcCCccEEEeccccc
Q 031924 131 IASVLCFINSGFLSL 145 (150)
Q Consensus 131 ~~~~~~~l~s~~~~~ 145 (150)
++ ++.++++...++
T Consensus 371 ~~-~~~lv~~~~~dg 384 (741)
T 1yr2_A 371 IA-GNRLFASYIHDA 384 (741)
T ss_dssp EE-BTEEEEEEEETT
T ss_pred EE-CCEEEEEEEECC
Confidence 77 556666655443
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.15 E-value=4.2e-09 Score=71.68 Aligned_cols=143 Identities=14% Similarity=0.015 Sum_probs=90.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCC--eEEEEEccccccccccc--
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG--TVLLYSWGYFKDCSDRF-- 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~-- 76 (150)
|+|+++++++++...++.|++||..+++....... ..... ++|+++++.|++++.++ .|.+++.... .....+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~-~~~~~~g~ 212 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG-WAPTRIGQ 212 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT-TCEEEEEE
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC-ceeEEeee
Confidence 47889999777777889999999998766544433 23334 99999999998888765 7888886422 222222
Q ss_pred --ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeee----ccCCCCc-ceeEEEEcC-CccEEEeccccccc
Q 031924 77 --VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQP----IAEHSEY-PIESLGIAS-VLCFINSGFLSLNV 147 (150)
Q Consensus 77 --~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~----~~~~~~~-~i~~~~~~~-~~~~l~s~~~~~~v 147 (150)
.. .......+. .+++..|+.+..++.|+.||..++..... ...+... |...++|+| ++.++++-.....|
T Consensus 213 ~~~~-~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 213 LGST-FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSV 291 (409)
T ss_dssp CCTT-SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEE
T ss_pred ccch-hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEE
Confidence 11 123344455 66444555567788999999976653221 1122221 123899999 57777665544433
No 203
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.13 E-value=1.4e-11 Score=82.78 Aligned_cols=134 Identities=10% Similarity=0.109 Sum_probs=69.6
Q ss_pred CcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccc-cce
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP-NSV 84 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~v 84 (150)
++..+++++.|+.|..||.++|+.+.+... +.+.+..+..++..+++++.|+.++.||.. .++...++.. +. ..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~-tG~~~w~~~~-~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK-NNEGLTKLPF-TIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC------CCSEECSC-CHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECC-CCceeeeeec-cCcccc
Confidence 577889999999999999999998877665 444455556677778888899999999985 3444433332 21 111
Q ss_pred eE-eeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEecccccccc
Q 031924 85 DA-LLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNVN 148 (150)
Q Consensus 85 ~~-~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v~ 148 (150)
.+ .....+..+++++.++.++.||..+++.+..+..+.. ..++|++..+++++.++.|.
T Consensus 84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v~~~~~dg~v~ 143 (369)
T 2hz6_A 84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLLYLGRTEYTIT 143 (369)
T ss_dssp TTCSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEE
T ss_pred ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-----ccccccCCEEEEEecCCEEE
Confidence 11 0111355777888899999999999998877754421 34556777777777666554
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.13 E-value=3.1e-08 Score=63.86 Aligned_cols=138 Identities=8% Similarity=0.015 Sum_probs=94.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeee-eeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccc-ccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT-RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCS-DRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~-~~~~~ 78 (150)
|+++++++..++...++.|.+||.. ++... .+......+.++++.++++..++...++.|..||.. ++.. .....
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~--g~~~~~~~~~ 101 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK--GGFTEYPLPQ 101 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEECSS
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC--CCeEEecCCC
Confidence 3567888888877788999999988 65443 222334578999999999877777778899999875 3322 11222
Q ss_pred ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeee-eccCCCCcceeEEEEcCCccEEEecccc
Q 031924 79 LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQ-PIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
....+..+. .++++++++...++.|..+|.. ++... .+..... .+..++++++|++.++....
T Consensus 102 -~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~~~ 166 (300)
T 2qc5_A 102 -PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGS-YPAFITLGSDNALWFTENQN 166 (300)
T ss_dssp -TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTC-CEEEEEECTTSSEEEEETTT
T ss_pred -CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCC-CceeEEECCCCCEEEEecCC
Confidence 234456666 6788888887778899999987 55432 2222233 48899999999977665433
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.12 E-value=5.3e-09 Score=70.41 Aligned_cols=137 Identities=10% Similarity=-0.052 Sum_probs=95.6
Q ss_pred eecCcceEEEEcC-----CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec----------CCCeEEEEEcc
Q 031924 3 FAADAMKLLGTSG-----DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWG 67 (150)
Q Consensus 3 ~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~i~~~~ 67 (150)
..|+++.+++... ++.|.++|..+++.+..+..-..+ . ++++|||+++++++ .++.|.+||..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 3578888888764 689999999999988877754445 4 99999999987765 35789999986
Q ss_pred cccccccccccccc--------cceeEeeecCCCEEEEecC--CCcEEEEeccCCeeeeeccCCCC---cce---eEEEE
Q 031924 68 YFKDCSDRFVGLSP--------NSVDALLKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSE---YPI---ESLGI 131 (150)
Q Consensus 68 ~~~~~~~~~~~~~~--------~~v~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~---~~i---~~~~~ 131 (150)
+ .+...++.. .. .+-....+++|++++.+.. ++.|.++|+.+++.+..+..... +|. .-++.
T Consensus 118 t-~~v~~~I~v-~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~ 195 (386)
T 3sjl_D 118 T-LLPTADIEL-PDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMH 195 (386)
T ss_dssp T-CCEEEEEEE-TTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE
T ss_pred C-CeEEEEEEC-CCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEE
Confidence 4 355555432 11 2222333899998887763 68999999999998887743211 111 12477
Q ss_pred cCCccEEEeccc
Q 031924 132 ASVLCFINSGFL 143 (150)
Q Consensus 132 ~~~~~~l~s~~~ 143 (150)
++||+++.....
T Consensus 196 ~~DG~~~~v~~~ 207 (386)
T 3sjl_D 196 CRDGSLAKVAFG 207 (386)
T ss_dssp ETTSCEEEEECC
T ss_pred CCCCCEEEEECC
Confidence 788887665543
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.12 E-value=3e-08 Score=63.95 Aligned_cols=137 Identities=5% Similarity=-0.051 Sum_probs=92.8
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCeeee-eeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccc-cccccc
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQT-RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCS-DRFVGL 79 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~-~~~~~~ 79 (150)
++++++++.++...++.|..||.. ++... ........+.++++.++|+..++...++.|..|+.. ++.. ..+..
T Consensus 68 ~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~- 143 (300)
T 2qc5_A 68 IVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD--GTIYEYDLPN- 143 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT--SCEEEEECSS-
T ss_pred EECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC--CCEEEccCCC-
Confidence 567788877777778899999988 55432 222234578999999999888877778899999874 3322 12222
Q ss_pred cccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeee-ccCCCCcceeEEEEcCCccEEEecccc
Q 031924 80 SPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 80 ~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
....+..+. .++++++++...++.|..+|. +++.... ...+.. .+..++++++|++.++....
T Consensus 144 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~~~ 208 (300)
T 2qc5_A 144 KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAA-APVGITSGNDGALWFVEIMG 208 (300)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC-CEEEEEECTTSSEEEEETTT
T ss_pred CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCC-CcceEEECCCCCEEEEccCC
Confidence 234456666 678887777777889999998 5554332 222223 48899999999877765433
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.08 E-value=3.8e-08 Score=67.01 Aligned_cols=143 Identities=8% Similarity=-0.009 Sum_probs=93.8
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeee----eccCCCc--EEEEEEEeC-CCEEEeecCCCeEEEEEcccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTR----SEFSEEE--LTSVVLMKN-GRKVVCGSQSGTVLLYSWGYFKDCS 73 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~--v~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~ 73 (150)
++++|++..|+.+..++.|..||..++..... ..+.... ...++|+|+ +..+++-..++.|+.|+... . .
T Consensus 224 iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-~ 300 (409)
T 3hrp_A 224 VALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG--E-C 300 (409)
T ss_dssp CEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC--C-E
T ss_pred EEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC--C-E
Confidence 46788555555577788999999987753322 1222222 139999995 56566666788999998742 2 2
Q ss_pred cccccccc---------------cceeEee-ecCCCEEEEec-CCCcEEEEeccCCeeeeeccCC---------------
Q 031924 74 DRFVGLSP---------------NSVDALL-KLDEDRVITGS-ENGLISLVGILPNRIIQPIAEH--------------- 121 (150)
Q Consensus 74 ~~~~~~~~---------------~~v~~~~-~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~--------------- 121 (150)
..+.+ +. .....++ .++|+++++-+ .++.|+.|++.++...... .+
T Consensus 301 ~~~~g-~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~-g~~~~~g~~~g~~~~~~ 378 (409)
T 3hrp_A 301 EWFCG-SATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA-GQVDVASQIDGTPLEAT 378 (409)
T ss_dssp EEEEE-CTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE-ECTTCBSCCCBSTTTCC
T ss_pred EEEEe-CCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe-CCCCCCCcCCCChhceE
Confidence 22222 11 2244555 78889888888 8899999997676643322 22
Q ss_pred CCcceeEEEEcCCccEEEeccccccccC
Q 031924 122 SEYPIESLGIASVLCFINSGFLSLNVNP 149 (150)
Q Consensus 122 ~~~~i~~~~~~~~~~~l~s~~~~~~v~~ 149 (150)
-. ....++++++|.++++-..+..|..
T Consensus 379 ~~-~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 379 FN-YPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp BS-SEEEEEECSSSEEEEEESTTCEEEE
T ss_pred eC-CceEEEEcCCCCEEEEECCCCeEEE
Confidence 12 3788999999999888777766643
No 208
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.07 E-value=1.8e-08 Score=71.25 Aligned_cols=67 Identities=13% Similarity=0.160 Sum_probs=54.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcC--CCeeeeeeccCCCcEEEEEEE----eCCCEEEeecC-CCeEEEEEccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLR--KNTVQTRSEFSEEELTSVVLM----KNGRKVVCGSQ-SGTVLLYSWGY 68 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-d~~i~i~~~~~ 68 (150)
+.|+||++++++++.++.|.+||+. +++.+..+... .....++|+ |+|+++++++. ++++.++|..+
T Consensus 202 v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 202 SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred eEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 4689999999999999999999995 77777666543 346899999 69999887764 58999999653
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.06 E-value=2.9e-08 Score=65.47 Aligned_cols=135 Identities=9% Similarity=0.007 Sum_probs=85.7
Q ss_pred eeecCcceEEEEcC------CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEe-ecCCCeEEEEEcc-ccc-cc
Q 031924 2 TFAADAMKLLGTSG------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWG-YFK-DC 72 (150)
Q Consensus 2 ~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~i~~~~-~~~-~~ 72 (150)
+++|+++++++... .+.|..++ +++... +.........++|+|+++.++. .+.++.|.+|++. ..+ ..
T Consensus 140 ~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~ 216 (326)
T 2ghs_A 140 RMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPT 216 (326)
T ss_dssp EECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBS
T ss_pred EECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcc
Confidence 57888887665542 24566666 454332 2222345678999999987654 4567899999974 122 21
Q ss_pred -----ccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEc-CCccEEEecc
Q 031924 73 -----SDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIA-SVLCFINSGF 142 (150)
Q Consensus 73 -----~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~s~~ 142 (150)
...+.. .......+. .++|++.++...++.|..||. +++.+..+..+.. .+.+++|+ +++..|..++
T Consensus 217 ~~~~~~~~~~~-~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~-~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 217 GKAEVFIDSTG-IKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGK-QTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp SCCEEEEECTT-SSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCS-BEEEEEEESTTSCEEEEEE
T ss_pred cCceEEEECCC-CCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCC-CcEEEEEecCCCCEEEEEe
Confidence 111222 223344555 678887777766789999998 5666666655544 48999998 8877654433
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=7.8e-08 Score=63.84 Aligned_cols=141 Identities=6% Similarity=-0.011 Sum_probs=87.6
Q ss_pred eeecCcceE-EEEc---CCCeEEEEEcCCCeeeeeeccC-----------------------------CCcEEEEEEEeC
Q 031924 2 TFAADAMKL-LGTS---GDGTLSVCNLRKNTVQTRSEFS-----------------------------EEELTSVVLMKN 48 (150)
Q Consensus 2 ~~~~~~~~l-~~~~---~d~~i~i~d~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~ 48 (150)
+++|++..+ ++-. .++.|.+||+.+++....+..| ...+..++|+|+
T Consensus 126 ~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d 205 (343)
T 2qe8_A 126 AVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE 205 (343)
T ss_dssp EEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT
T ss_pred EEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC
Confidence 567654444 4444 5789999999887655444321 023588999999
Q ss_pred CCEEEeecCCC-eEEEEEcccc-------ccccccc--ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeee
Q 031924 49 GRKVVCGSQSG-TVLLYSWGYF-------KDCSDRF--VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQP 117 (150)
Q Consensus 49 ~~~l~~~~~d~-~i~i~~~~~~-------~~~~~~~--~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 117 (150)
|+.|+.+..++ .+..++.... .+....+ .+ +......++ .++|+++++...++.|..||..+++....
T Consensus 206 g~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~ 284 (343)
T 2qe8_A 206 NEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS-EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLL 284 (343)
T ss_dssp SCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE-ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc-cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEE
Confidence 99888776655 5555553210 0111111 12 222233444 67889999988999999999855654322
Q ss_pred ccC-CCCcceeEEEEcCCccEEEecccc
Q 031924 118 IAE-HSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 118 ~~~-~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
... +.. .+..++|.++++++++.+..
T Consensus 285 ~~~~~~~-~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 285 VTDEKLS-WTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EECGGGS-CEEEEEECTTSCEEEEECCG
T ss_pred EECCcee-cCCeeEECCCCcEEEEeCcc
Confidence 221 123 38899999999988876644
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.96 E-value=1.5e-07 Score=63.37 Aligned_cols=109 Identities=9% Similarity=-0.080 Sum_probs=77.1
Q ss_pred CeeecCcceEEEEc----------CCCeEEEEEcCCCeeeeeeccC-------CCcEEEEEEEeCCCEEEeecC--CCeE
Q 031924 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFS-------EEELTSVVLMKNGRKVVCGSQ--SGTV 61 (150)
Q Consensus 1 i~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i 61 (150)
++++||+++++.+. .++.|.+||..+.+.+..+... ......+.++|||++|+++.. ++.|
T Consensus 71 i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v 150 (373)
T 2mad_H 71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAV 150 (373)
T ss_pred eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeE
Confidence 57899999999885 3678999999988776655422 123458999999999998874 5789
Q ss_pred EEEEcccccccccc-cccccccceeEeeecCCCEEEEecCCCcEEEEeccCCeee
Q 031924 62 LLYSWGYFKDCSDR-FVGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRII 115 (150)
Q Consensus 62 ~i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 115 (150)
.++| . .++...+ +.. +..+ .+.....+.+++.+.||.+.++|. +++..
T Consensus 151 ~viD-~-t~~~~~~~i~~--~~~~-~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 151 GLVV-Q-GGSSDDQLLSS--PTCY-HIHPGAPSTFYLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred EEEE-C-CCCEEeEEcCC--CceE-EEEeCCCceEEEEcCCCCEEEEEC-CCcEE
Confidence 9999 6 4455555 543 2221 122223356677788999999999 77655
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.96 E-value=5.9e-08 Score=63.32 Aligned_cols=134 Identities=10% Similarity=-0.060 Sum_probs=86.2
Q ss_pred eeecCcc-eEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccc---c
Q 031924 2 TFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF---V 77 (150)
Q Consensus 2 ~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~---~ 77 (150)
.|+|+++ ++++...++.|..|+. +++. ..+......+..++++++|+.+++...++.|.+|+.. ++..... .
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~~~~~~~~~ 126 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQAHLLVGRYA 126 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEECEET
T ss_pred eEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC--CCEEEEEeccC
Confidence 6899988 5666667899999998 4543 3334455678999999999977766666889999864 3321111 1
Q ss_pred cccccceeEee-ecCCCEEEE----ecC-------------CCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEE
Q 031924 78 GLSPNSVDALL-KLDEDRVIT----GSE-------------NGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFIN 139 (150)
Q Consensus 78 ~~~~~~v~~~~-~~~~~~l~~----~~~-------------dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (150)
+.....+..+. .++|+++++ |.. .+.|+.+|..+++..... ... ....++|+||++.|.
T Consensus 127 ~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~-~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 127 GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD-HPNGLAFSPDEQTLY 203 (305)
T ss_dssp TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES-SEEEEEECTTSSEEE
T ss_pred CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC-CCcceEEcCCCCEEE
Confidence 10112234454 778888876 332 246777787666543332 223 367899999998665
Q ss_pred ecc
Q 031924 140 SGF 142 (150)
Q Consensus 140 s~~ 142 (150)
.+.
T Consensus 204 v~~ 206 (305)
T 3dr2_A 204 VSQ 206 (305)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.92 E-value=8.3e-08 Score=62.43 Aligned_cols=133 Identities=9% Similarity=-0.011 Sum_probs=83.6
Q ss_pred CeeecCcceEEE-------EcCCCeEEEEEcCCCeeeeeec----cCCCcEEEEEEEeC-CCEEEeecCCCeEEEEEccc
Q 031924 1 MTFAADAMKLLG-------TSGDGTLSVCNLRKNTVQTRSE----FSEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWGY 68 (150)
Q Consensus 1 i~~~~~~~~l~~-------~~~d~~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~~~~~ 68 (150)
++|+++++++++ ...++.|..||..+++...... ++...+.+++++++ |+.+++. ..+.|.+||..
T Consensus 23 ~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~- 100 (314)
T 1pjx_A 23 PVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD- 100 (314)
T ss_dssp EEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-
T ss_pred ceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-
Confidence 368888887777 5678899999988876543222 13456889999999 6655544 44478889975
Q ss_pred ccccccc-cc---cccccceeEee-ecCCCEEEEecCC---------------CcEEEEeccCCeeeeeccCCCCcceeE
Q 031924 69 FKDCSDR-FV---GLSPNSVDALL-KLDEDRVITGSEN---------------GLISLVGILPNRIIQPIAEHSEYPIES 128 (150)
Q Consensus 69 ~~~~~~~-~~---~~~~~~v~~~~-~~~~~~l~~~~~d---------------g~i~~~d~~~~~~~~~~~~~~~~~i~~ 128 (150)
++.... .. ......+..+. .++++++++...+ +.|..++.. ++..... .+.. ....
T Consensus 101 -g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~-~~~~ 176 (314)
T 1pjx_A 101 -GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQ-FPNG 176 (314)
T ss_dssp -SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEES-SEEE
T ss_pred -CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCC-Ccce
Confidence 333222 11 10123355666 7788888777655 567777765 4443322 2223 3678
Q ss_pred EEEc----CCccEEE
Q 031924 129 LGIA----SVLCFIN 139 (150)
Q Consensus 129 ~~~~----~~~~~l~ 139 (150)
++++ |+++.+.
T Consensus 177 i~~~~~~d~dg~~l~ 191 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLI 191 (314)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEecccCCCCCEEE
Confidence 8999 9996543
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.92 E-value=1.9e-08 Score=67.72 Aligned_cols=110 Identities=11% Similarity=0.023 Sum_probs=79.3
Q ss_pred CeeecCcceEEEEc----------CCCeEEEEEcCCCeeeeeeccCC-------CcEEEEEEEeCCCEEEeecC--CCeE
Q 031924 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFSE-------EELTSVVLMKNGRKVVCGSQ--SGTV 61 (150)
Q Consensus 1 i~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~i 61 (150)
++++||++++++++ .++.|.+||..+.+.+..+.-.. .....+.++|||++++++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 47899999888875 36789999999998877664321 24567899999999988764 6899
Q ss_pred EEEEcccccccccccccccccceeEeeecCCCEEEEecCCCcEEEEeccC-Cee
Q 031924 62 LLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSENGLISLVGILP-NRI 114 (150)
Q Consensus 62 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~ 114 (150)
.++|+.+ .+.+.++.. . . ...+.....+.+++.+.||.+.+.++.+ ++.
T Consensus 163 sVID~~t-~~vv~tI~v-~-g-~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 163 GVVDLEG-KAFKRMLDV-P-D-CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEETTT-TEEEEEEEC-C-S-EEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred EEEECCC-CcEEEEEEC-C-C-cceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 9999864 466666653 2 1 1222233456777888899988888875 554
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.91 E-value=4.5e-08 Score=66.85 Aligned_cols=136 Identities=10% Similarity=-0.059 Sum_probs=92.1
Q ss_pred cCcceEEEEcC-C----CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec----------CCCeEEEEEcccc
Q 031924 5 ADAMKLLGTSG-D----GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGYF 69 (150)
Q Consensus 5 ~~~~~l~~~~~-d----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~i~~~~~~ 69 (150)
|+++.+++... + +.|.++|..+++.+..+..-..+ .+.++|||++++++. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t- 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT- 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC-
Confidence 35666666544 3 69999999999988887755555 899999999988776 367899999864
Q ss_pred ccccccccccc--------ccceeEeeecCCCEEEEecC--CCcEEEEeccCCeeeeeccCCCCc------ceeEEEEcC
Q 031924 70 KDCSDRFVGLS--------PNSVDALLKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEY------PIESLGIAS 133 (150)
Q Consensus 70 ~~~~~~~~~~~--------~~~v~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~------~i~~~~~~~ 133 (150)
.+...++.. . ..+-....+++|++++.+.. ++.|.++|+.+++.+..+...... .-.-+.+++
T Consensus 159 ~~vv~~I~v-~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~ 237 (426)
T 3c75_H 159 FLPIADIEL-PDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCR 237 (426)
T ss_dssp CCEEEEEEE-TTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET
T ss_pred CcEEEEEEC-CCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcC
Confidence 355555432 1 11112233889998888764 578999999999888777532110 112256778
Q ss_pred CccEEEecccc
Q 031924 134 VLCFINSGFLS 144 (150)
Q Consensus 134 ~~~~l~s~~~~ 144 (150)
+|+++.....+
T Consensus 238 dG~~~~V~~~~ 248 (426)
T 3c75_H 238 DGSLARVDFAD 248 (426)
T ss_dssp TSSEEEEECCT
T ss_pred CCCEEEEECCC
Confidence 88766544433
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.90 E-value=6.5e-08 Score=63.12 Aligned_cols=136 Identities=6% Similarity=-0.004 Sum_probs=83.5
Q ss_pred CeeecCcceEEE----EcC-------------CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCC-----
Q 031924 1 MTFAADAMKLLG----TSG-------------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----- 58 (150)
Q Consensus 1 i~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 58 (150)
++++|++++.++ +.. .+.|..+|..+++..... .......++|+|+++.|+.+...
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~ 213 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHG 213 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---C
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCC
Confidence 357788887775 321 356777887666544332 33456889999999988777654
Q ss_pred -CeEEEEEccccc-ccccccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCc
Q 031924 59 -GTVLLYSWGYFK-DCSDRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVL 135 (150)
Q Consensus 59 -~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~ 135 (150)
+.|.+|++...+ .....+..........+. .++|++.++ ..+ .|.+|+. .++.+..+..+. .+..++|+|++
T Consensus 214 ~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~~~~~~~~~--~~~~~~f~~d~ 288 (305)
T 3dr2_A 214 SVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQLLGHIPTPG--TASNCTFDQAQ 288 (305)
T ss_dssp CCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT-TSCEEEEEECSS--CCCEEEECTTS
T ss_pred CCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC-CCCEEEEEECCC--ceeEEEEeCCC
Confidence 789999975322 000111110112223344 677875544 444 4999998 466666664443 38889999998
Q ss_pred cEEEeccc
Q 031924 136 CFINSGFL 143 (150)
Q Consensus 136 ~~l~s~~~ 143 (150)
+.|..++.
T Consensus 289 ~~L~it~~ 296 (305)
T 3dr2_A 289 QRLFITGG 296 (305)
T ss_dssp CEEEEEET
T ss_pred CEEEEEcC
Confidence 76665544
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.90 E-value=3.9e-07 Score=61.33 Aligned_cols=111 Identities=8% Similarity=-0.117 Sum_probs=78.8
Q ss_pred ecCcceEEEEcC--CC---eEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec----------CCCeEEEEEccc
Q 031924 4 AADAMKLLGTSG--DG---TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGY 68 (150)
Q Consensus 4 ~~~~~~l~~~~~--d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~i~~~~~ 68 (150)
.|+++++++... .. +|.+||..+++.+..+.....+ .++++|||++++++. .++.+.+||...
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 367777777754 33 8899999999887776654443 999999999998875 367899999853
Q ss_pred cccccccccccc-------ccceeEee-ecCCCEEEEecC--CCcEEEEeccCCeeeee-cc
Q 031924 69 FKDCSDRFVGLS-------PNSVDALL-KLDEDRVITGSE--NGLISLVGILPNRIIQP-IA 119 (150)
Q Consensus 69 ~~~~~~~~~~~~-------~~~v~~~~-~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~-~~ 119 (150)
.+...++.. . ......+. +|+|++++.+.. ++.|.++| .+++.+.. +.
T Consensus 107 -~~~~~~i~~-~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 107 -FLPIADIEL-PDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred -CcEEEEEEC-CCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 344444332 1 01122344 899999988764 57899999 99888777 63
No 218
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=5.4e-07 Score=57.80 Aligned_cols=139 Identities=9% Similarity=0.054 Sum_probs=88.3
Q ss_pred CeeecCcceEEEEc--CCCeEEEEEcCCCeeeeeeccCC-CcEEEEEEEeCCCEEEee-cCCCeEEEEEccccccccccc
Q 031924 1 MTFAADAMKLLGTS--GDGTLSVCNLRKNTVQTRSEFSE-EELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~ 76 (150)
++|+|++.+.++.+ .++.|+++|+++++.+..+.-.. .....+++. +..++.. -.++.+.++|.. ..+.+.++
T Consensus 26 l~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~-t~~v~~~i 102 (266)
T 2iwa_A 26 LVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRR-TLSNIKNF 102 (266)
T ss_dssp EEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETT-TTEEEEEE
T ss_pred EEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECC-CCcEEEEE
Confidence 46788865555543 36899999999999887765322 233345544 5555544 467899999986 34666666
Q ss_pred cccc-ccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCC-Cc---ceeEEEEcCCccEEEecccccc
Q 031924 77 VGLS-PNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EY---PIESLGIASVLCFINSGFLSLN 146 (150)
Q Consensus 77 ~~~~-~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~---~i~~~~~~~~~~~l~s~~~~~~ 146 (150)
+. . +.. .. ..++++.++.+..++.+.++|..+.+.+..+.-.. +. .++.+.|. +|+..+....+..
T Consensus 103 ~~-g~~~g-~g-lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 103 TH-QMKDG-WG-LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EC-CSSSC-CE-EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EC-CCCCe-EE-EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 54 3 222 12 24567666666678899999999988777764221 11 25677777 6776665544443
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=1.4e-07 Score=62.67 Aligned_cols=142 Identities=11% Similarity=0.051 Sum_probs=86.5
Q ss_pred CeeecCcceEEEEc--CCCeEEEEEcCCCeeeeee-------ccCCCcEEEEEEEeCCCEEEeecC-----CCeEEEEEc
Q 031924 1 MTFAADAMKLLGTS--GDGTLSVCNLRKNTVQTRS-------EFSEEELTSVVLMKNGRKVVCGSQ-----SGTVLLYSW 66 (150)
Q Consensus 1 i~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~i~~~ 66 (150)
|+++|+++.+++.. .++.+++|.+.+++.. .+ ..+...+.+++++++++..++-.. ++.|.+||+
T Consensus 22 va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 22 ITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp EEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred EEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence 46789999888863 2342455554455433 11 123457899999999886665433 578999998
Q ss_pred cccccccccccc-----ccccceeEee-ecC-CCEEEEec---CCCcEEEEeccCCeeeeeccCCCC-------------
Q 031924 67 GYFKDCSDRFVG-----LSPNSVDALL-KLD-EDRVITGS---ENGLISLVGILPNRIIQPIAEHSE------------- 123 (150)
Q Consensus 67 ~~~~~~~~~~~~-----~~~~~v~~~~-~~~-~~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~------------- 123 (150)
. .++...++.. .+......+. .++ +..+++.. .++.|.+||+.+++..+.+..|..
T Consensus 101 ~-tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~ 179 (343)
T 2qe8_A 101 L-NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGV 179 (343)
T ss_dssp T-TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTE
T ss_pred C-CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCE
Confidence 5 3344443321 0112334555 554 44555555 678999999987776554432110
Q ss_pred ---------------cceeEEEEcCCccEEEecccc
Q 031924 124 ---------------YPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 124 ---------------~~i~~~~~~~~~~~l~s~~~~ 144 (150)
..+..++|+|||+.|..+...
T Consensus 180 ~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~ 215 (343)
T 2qe8_A 180 PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH 215 (343)
T ss_dssp ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS
T ss_pred EEEeccCCCceeceecccceeEeccCCCEEEEEeCC
Confidence 125789999999877765443
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.88 E-value=3.3e-08 Score=71.44 Aligned_cols=132 Identities=8% Similarity=0.063 Sum_probs=78.1
Q ss_pred eeecCcceEEEE-----cCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCC-------------eEEE
Q 031924 2 TFAADAMKLLGT-----SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG-------------TVLL 63 (150)
Q Consensus 2 ~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~i 63 (150)
+||||+++|+.+ +....|++||+++++.+.... .......++|+ |++.|+.++.+. .|++
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEE
Confidence 689999988853 233679999999997653211 11113567899 999988877663 4888
Q ss_pred EEccccccccccc-ccc--cccceeEee-ecCCCEEEEecC----CCcEEEEeccCCe-eeeeccCCCCcceeEEEEcCC
Q 031924 64 YSWGYFKDCSDRF-VGL--SPNSVDALL-KLDEDRVITGSE----NGLISLVGILPNR-IIQPIAEHSEYPIESLGIASV 134 (150)
Q Consensus 64 ~~~~~~~~~~~~~-~~~--~~~~v~~~~-~~~~~~l~~~~~----dg~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~~~~ 134 (150)
|++.+.......+ ... ++....... +++|++|+.... ++.++++|+.++. ....+..+.. ..... ++++
T Consensus 213 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-~~~~~-~~~~ 290 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-ADVSL-VDNK 290 (693)
T ss_dssp EETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-SCEEE-EEEE
T ss_pred EECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-ceEEE-Eecc
Confidence 9886432211122 220 112234444 889987754332 3589999987653 3344444444 23333 5555
Q ss_pred ccE
Q 031924 135 LCF 137 (150)
Q Consensus 135 ~~~ 137 (150)
|..
T Consensus 291 g~~ 293 (693)
T 3iuj_A 291 GST 293 (693)
T ss_dssp TTE
T ss_pred CCE
Confidence 443
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.83 E-value=2.3e-07 Score=67.11 Aligned_cols=138 Identities=6% Similarity=0.017 Sum_probs=87.1
Q ss_pred CeeecCcceEEEEcCCC-------------eEEEEEcCCCee----eeeecc-CCCcEEEEEEEeCCCEEEeec----CC
Q 031924 1 MTFAADAMKLLGTSGDG-------------TLSVCNLRKNTV----QTRSEF-SEEELTSVVLMKNGRKVVCGS----QS 58 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~-------------~i~i~d~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~----~d 58 (150)
++|+ |++.|+.++.+. .|++|++.++.. +..... +......+.|+|||++|+... .+
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSG 258 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSC
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCC
Confidence 4799 999888887663 499999877542 222223 344578899999999885433 23
Q ss_pred CeEEEEEcccccccccccccccccceeEeeecCCC-EEEEecCC---CcEEEEeccCCee--eeeccCCCCcceeEEEEc
Q 031924 59 GTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDED-RVITGSEN---GLISLVGILPNRI--IQPIAEHSEYPIESLGIA 132 (150)
Q Consensus 59 ~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d---g~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~ 132 (150)
..++++|+.........+.. +.........+++. +++....+ +.|..+|+.++.. .+.+..+... +. .|+
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~-~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~--~~s 334 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQG-DLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-VL--TVH 334 (693)
T ss_dssp CEEEEEETTSTTCCCEEEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CE--EEE
T ss_pred cEEEEEECCCCCCceEEEeC-CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-EE--EEE
Confidence 58899998543324445554 44444444545454 44454443 5788899876543 3344455443 43 889
Q ss_pred CCccEEEeccc
Q 031924 133 SVLCFINSGFL 143 (150)
Q Consensus 133 ~~~~~l~s~~~ 143 (150)
++++.|+....
T Consensus 335 ~~g~~lv~~~~ 345 (693)
T 3iuj_A 335 SGSGYLFAEYM 345 (693)
T ss_dssp EETTEEEEEEE
T ss_pred EECCEEEEEEE
Confidence 98888776554
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.83 E-value=5e-07 Score=58.73 Aligned_cols=139 Identities=9% Similarity=0.042 Sum_probs=83.1
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeecc----CCCcEEEEEEEeCCCEEEeecC---------CCeEEEEEcc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF----SEEELTSVVLMKNGRKVVCGSQ---------SGTVLLYSWG 67 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~---------d~~i~i~~~~ 67 (150)
++++|+++++++. ++.|.+||.++++....... ....++.++++|+|+..++... ...-.+|.+.
T Consensus 59 i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 59 VALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp EEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred EEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE
Confidence 4678899855554 56899999988765432221 1235789999999996664422 1233455443
Q ss_pred cccccccccccccccceeEee-ecCCCEE-EEecCCCcEEEEec--cCCee-----eeeccCCCCcceeEEEEcCCccEE
Q 031924 68 YFKDCSDRFVGLSPNSVDALL-KLDEDRV-ITGSENGLISLVGI--LPNRI-----IQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 68 ~~~~~~~~~~~~~~~~v~~~~-~~~~~~l-~~~~~dg~i~~~d~--~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
..++... +.. .......+. +++++.+ ++.+.++.|..|++ .++.. +..+..+.. .+..++++++|++.
T Consensus 137 ~~g~~~~-~~~-~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~-~p~g~~~d~~G~lw 213 (297)
T 3g4e_A 137 PDHHVKK-YFD-QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ-IPDGMCIDAEGKLW 213 (297)
T ss_dssp TTSCEEE-EEE-EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC-EEEEEEEBTTSCEE
T ss_pred CCCCEEE-Eee-ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC-CCCeeEECCCCCEE
Confidence 2233222 222 223344555 7888755 55566789999987 34432 223323334 37789999999877
Q ss_pred Eecccc
Q 031924 139 NSGFLS 144 (150)
Q Consensus 139 ~s~~~~ 144 (150)
++....
T Consensus 214 va~~~~ 219 (297)
T 3g4e_A 214 VACYNG 219 (297)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 765443
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.82 E-value=5e-08 Score=66.66 Aligned_cols=110 Identities=9% Similarity=-0.060 Sum_probs=77.3
Q ss_pred CeeecCcceEEEEc----------CCCeEEEEEcCCCeeeeeeccC-------CCcEEEEEEEeCCCEEEeecC--CCeE
Q 031924 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFS-------EEELTSVVLMKNGRKVVCGSQ--SGTV 61 (150)
Q Consensus 1 i~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i 61 (150)
|+++||+++++++. .++.|.++|..+++.+..+.-. ......+.++|||++++++.. ++.|
T Consensus 123 ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~V 202 (426)
T 3c75_H 123 PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAV 202 (426)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEE
T ss_pred eEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeE
Confidence 47899999888876 4678999999999887666421 123467899999999988764 5799
Q ss_pred EEEEcccccccccccccccccceeEeeec-CCCEEEEecCCCcEEEEeccCCeee
Q 031924 62 LLYSWGYFKDCSDRFVGLSPNSVDALLKL-DEDRVITGSENGLISLVGILPNRII 115 (150)
Q Consensus 62 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~ 115 (150)
.+.|+.. .+.+.++.. ... ....+ ..+.+++.+.||.+.+.+..+++..
T Consensus 203 sVID~~t-~kvv~~I~v-~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~ 252 (426)
T 3c75_H 203 GVVDLEG-KTFDRMLDV-PDC---YHIFPASPTVFYMNCRDGSLARVDFADGETK 252 (426)
T ss_dssp EEEETTT-TEEEEEEEC-CSE---EEEEEEETTEEEEEETTSSEEEEECCTTCCE
T ss_pred EEEECCC-CeEEEEEEc-CCc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEE
Confidence 9999864 456666653 211 12233 2356677778888888887555544
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.80 E-value=6.9e-07 Score=57.34 Aligned_cols=139 Identities=8% Similarity=-0.045 Sum_probs=90.4
Q ss_pred CcceEEE-EcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc-ccccc
Q 031924 6 DAMKLLG-TSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPNS 83 (150)
Q Consensus 6 ~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~ 83 (150)
+++.|+. .-.++.+.++|..+.+.+..+..... ....+++||+.++++..++.+.++|..+. +...++.- ....+
T Consensus 74 ~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~-~v~~~I~Vg~~~~p 150 (266)
T 2iwa_A 74 LNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTF-KLIKKHNVKYNGHR 150 (266)
T ss_dssp ETTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTC-CEEEEEECEETTEE
T ss_pred eCCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCC-cEEEEEEECCCCcc
Confidence 3444544 45789999999999988877753211 12446678887877777899999998643 44444442 01112
Q ss_pred ---eeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCC------------CcceeEEEEcCCcc-EEEeccccccc
Q 031924 84 ---VDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS------------EYPIESLGIASVLC-FINSGFLSLNV 147 (150)
Q Consensus 84 ---v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~------------~~~i~~~~~~~~~~-~l~s~~~~~~v 147 (150)
...+...++..++....++.|.+.|+.+++.+..+.... ......++|+|+++ +++++.....+
T Consensus 151 ~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v 230 (266)
T 2iwa_A 151 VIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKL 230 (266)
T ss_dssp CCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEE
T ss_pred cccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeE
Confidence 233433367666666678899999999999887774310 11368999999875 56666554433
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.80 E-value=2.4e-07 Score=67.04 Aligned_cols=128 Identities=9% Similarity=-0.005 Sum_probs=85.5
Q ss_pred eEEEEcCCCeEEEEEcCCCeeeeeeccCC----------------------------Cc-----------EEEEEEEeCC
Q 031924 9 KLLGTSGDGTLSVCNLRKNTVQTRSEFSE----------------------------EE-----------LTSVVLMKNG 49 (150)
Q Consensus 9 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------------------------~~-----------v~~~~~~~~~ 49 (150)
.++.++.+|.++++|.++++.+....... .. -..++++|+.
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~ 400 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT 400 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence 67788899999999999998763322110 00 1126788887
Q ss_pred CEEEeecC---------------------------------------------CCeEEEEEcccccccccccccccccce
Q 031924 50 RKVVCGSQ---------------------------------------------SGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (150)
Q Consensus 50 ~~l~~~~~---------------------------------------------d~~i~i~~~~~~~~~~~~~~~~~~~~v 84 (150)
..+++... +|.+..||+. .++..-+++. +....
T Consensus 401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~-tG~~~W~~~~-~~~~~ 478 (689)
T 1yiq_A 401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV-KQQAAWEVPY-VTIFN 478 (689)
T ss_dssp TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT-TTEEEEEEEE-SSSCC
T ss_pred CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC-CCCeEeEccC-CCCcc
Confidence 77765421 3779999985 4565555543 32222
Q ss_pred eEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE
Q 031924 85 DALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 85 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
.......+.+++.++.||.++.||.++++.+..+.........-+.|..+|+.+
T Consensus 479 ~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQY 532 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEE
Confidence 223355678999999999999999999999888764433223446777888743
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.79 E-value=1.4e-06 Score=57.38 Aligned_cols=133 Identities=8% Similarity=0.059 Sum_probs=80.5
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeecc----CCCcEEEEEEEeCCCEEEeecC------CCeEEEEEccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF----SEEELTSVVLMKNGRKVVCGSQ------SGTVLLYSWGYFK 70 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~~~~~~~ 70 (150)
++|+|+++++++. .+ .|.+||.++++....... ....+.+++++|+|+..++... .+.|..++ .+
T Consensus 95 i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~---~g 169 (326)
T 2ghs_A 95 LAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA---KG 169 (326)
T ss_dssp EEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE---TT
T ss_pred EEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe---CC
Confidence 3578888877765 44 599999988765432221 1236889999999987665432 23444444 23
Q ss_pred ccccccccccccceeEee-ecCCCEEE-EecCCCcEEEEecc--CC-e-----eeeeccCCCCcceeEEEEcCCccEEEe
Q 031924 71 DCSDRFVGLSPNSVDALL-KLDEDRVI-TGSENGLISLVGIL--PN-R-----IIQPIAEHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 71 ~~~~~~~~~~~~~v~~~~-~~~~~~l~-~~~~dg~i~~~d~~--~~-~-----~~~~~~~~~~~~i~~~~~~~~~~~l~s 140 (150)
+.. .+.. .......+. +++++.++ +.+.++.|.+|+.. ++ + .+..+..... .+..++++++|.+.++
T Consensus 170 ~~~-~~~~-~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~-~p~gi~~d~~G~lwva 246 (326)
T 2ghs_A 170 KVT-KLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG-GMDGSVCDAEGHIWNA 246 (326)
T ss_dssp EEE-EEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS-EEEEEEECTTSCEEEE
T ss_pred cEE-EeeC-CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCC-CCCeeEECCCCCEEEE
Confidence 322 2222 223344555 78887654 44567899999985 44 2 2222322334 3678999999987766
Q ss_pred c
Q 031924 141 G 141 (150)
Q Consensus 141 ~ 141 (150)
.
T Consensus 247 ~ 247 (326)
T 2ghs_A 247 R 247 (326)
T ss_dssp E
T ss_pred E
Confidence 5
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.77 E-value=6.9e-07 Score=61.20 Aligned_cols=139 Identities=11% Similarity=0.012 Sum_probs=88.7
Q ss_pred eeecCcceEEEEc-------------------CCCeEEEEEcCCCeeeeeeccC-C-CcEEEEEE--EeCCCEEEeec--
Q 031924 2 TFAADAMKLLGTS-------------------GDGTLSVCNLRKNTVQTRSEFS-E-EELTSVVL--MKNGRKVVCGS-- 56 (150)
Q Consensus 2 ~~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~-~-~~v~~~~~--~~~~~~l~~~~-- 56 (150)
.|+|+++.++++. .+.+|.+||+.+++.+.++... . .....+.| +|+++++++++
T Consensus 194 ~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~ 273 (462)
T 2ece_A 194 WWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVV 273 (462)
T ss_dssp EEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEE
T ss_pred EECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEee
Confidence 3689999888884 3789999999998877766643 2 23455656 99999887776
Q ss_pred ----CCCeEEEEEcccccc--ccc-----------ccc-------cccccceeEee-ecCCCEEEEec-CCCcEEEEecc
Q 031924 57 ----QSGTVLLYSWGYFKD--CSD-----------RFV-------GLSPNSVDALL-KLDEDRVITGS-ENGLISLVGIL 110 (150)
Q Consensus 57 ----~d~~i~i~~~~~~~~--~~~-----------~~~-------~~~~~~v~~~~-~~~~~~l~~~~-~dg~i~~~d~~ 110 (150)
.+++|.+|.... +. ..+ .+. + .......+. ++++++|.++. ..+.|.++|+.
T Consensus 274 ~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~-~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 274 SLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKA-VPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp ETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTE-ECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred eccCCCceEEEEEecC-CceeEEEEEeCCCcccccccccccccccc-CCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 456887765432 11 011 110 0 012234444 88999876665 47899999985
Q ss_pred C---CeeeeeccCCC---------Cc----ceeEEEEcCCccEEEecc
Q 031924 111 P---NRIIQPIAEHS---------EY----PIESLGIASVLCFINSGF 142 (150)
Q Consensus 111 ~---~~~~~~~~~~~---------~~----~i~~~~~~~~~~~l~s~~ 142 (150)
. .+.+..+.... +. ....++++|||++|..+.
T Consensus 352 d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 352 NPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp STTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 2 24444442210 00 257799999999887765
No 228
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.77 E-value=2.5e-06 Score=53.89 Aligned_cols=129 Identities=9% Similarity=0.029 Sum_probs=85.7
Q ss_pred eEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc-ccccc---e
Q 031924 9 KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPNS---V 84 (150)
Q Consensus 9 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~---v 84 (150)
.......++.+.+||.++.+.+.++...... ..+.+++..|+++..++.|.++|..+. +...++.- .+..+ +
T Consensus 77 ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~-~~~~~I~V~~~g~~~~~l 152 (243)
T 3mbr_X 77 LIQLTWRNHEGFVYDLATLTPRARFRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTL-QQVGSIKVTAGGRPLDNL 152 (243)
T ss_dssp EEEEESSSSEEEEEETTTTEEEEEEECSSCC---CEEEECSSCEEEECSSSEEEEECTTTC-CEEEEEECEETTEECCCE
T ss_pred EEEEEeeCCEEEEEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCC-eEEEEEEEccCCcccccc
Confidence 3334457899999999999888777643322 334467777877777899999998643 44455432 01122 2
Q ss_pred eEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCC------------CCcceeEEEEcCCcc-EEEec
Q 031924 85 DALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------SEYPIESLGIASVLC-FINSG 141 (150)
Q Consensus 85 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~-~l~s~ 141 (150)
+-+...+|+.++....+..|.+.|+.+++.+..+... ...-.+.++++|+++ ++++|
T Consensus 153 NeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 153 NELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred eeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 2333457777776667889999999999987776411 112368899999765 45554
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.76 E-value=3.2e-07 Score=66.29 Aligned_cols=129 Identities=9% Similarity=0.013 Sum_probs=86.7
Q ss_pred ceEEEEcCCCeEEEEEcCCCeeeeeeccCC----------C-cE------------------------EEEEEEeCCCEE
Q 031924 8 MKLLGTSGDGTLSVCNLRKNTVQTRSEFSE----------E-EL------------------------TSVVLMKNGRKV 52 (150)
Q Consensus 8 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~-~v------------------------~~~~~~~~~~~l 52 (150)
+.++.++.+|.++++|.++++.+....... + ++ ..++++|++..+
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 578888999999999999998875543211 0 11 146888888777
Q ss_pred EeecC-------------------------------------------CCeEEEEEccccccccccccccccccee-Eee
Q 031924 53 VCGSQ-------------------------------------------SGTVLLYSWGYFKDCSDRFVGLSPNSVD-ALL 88 (150)
Q Consensus 53 ~~~~~-------------------------------------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~-~~~ 88 (150)
++... .|.|..||+. .++..-++.. . .... ...
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~-tG~~~W~~~~-~-~~~~~g~~ 484 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPV-AQKAAWSVEH-V-SPWNGGTL 484 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETT-TTEEEEEEEE-S-SSCCCCEE
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCC-CCcEEeecCC-C-CCCcCcce
Confidence 76432 2789999985 4455555443 2 2222 223
Q ss_pred ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEE
Q 031924 89 KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFIN 139 (150)
Q Consensus 89 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (150)
...+.+++.++.||.+++||.++++.+..+.........-+.|.++|+.++
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 456778888999999999999999998887544331234466778886433
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.76 E-value=1.1e-06 Score=56.03 Aligned_cols=133 Identities=9% Similarity=-0.008 Sum_probs=87.4
Q ss_pred cCcceEEEE-cCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccc-ccc
Q 031924 5 ADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL-SPN 82 (150)
Q Consensus 5 ~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~ 82 (150)
++++.|... ..++.+.+||.++.+.+.++.... ....+.++++.|+....++.|.++|..+. +...++... ...
T Consensus 94 ~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~-~v~~~I~V~~~g~ 169 (262)
T 3nol_A 94 DWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESL-TPVRTITVTAHGE 169 (262)
T ss_dssp EETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTC-SEEEEEECEETTE
T ss_pred EeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCC-eEEEEEEeccCCc
Confidence 344444444 468999999999998887776432 22344567888877777888999998643 444444320 112
Q ss_pred c---eeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCC-----------CCcceeEEEEcCCccEEEec
Q 031924 83 S---VDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEH-----------SEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 83 ~---v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~s~ 141 (150)
+ +.-+...+|++.+....+..|.+.|+.+++.+..+... ...-.+.++|+|+++.|...
T Consensus 170 ~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 170 ELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp ECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred cccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 2 22333447777776667889999999999987776431 01136889999976654443
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.74 E-value=8.4e-07 Score=56.68 Aligned_cols=131 Identities=11% Similarity=-0.013 Sum_probs=82.9
Q ss_pred cceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEee-cCCCeEEEEEccccccccccccccccccee
Q 031924 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCSDRFVGLSPNSVD 85 (150)
Q Consensus 7 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~ 85 (150)
+.+..+.+.+|.|+++|+++++.+..+ -. .........++++.|... -.++.+.+||..+ .+.+.+++. .... .
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T-l~~~~ti~~-~~eG-w 139 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGLLFTWSGMP-PQRERTTRY-SGEG-W 139 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCEEEEEETTT-TEEEEEEEC-SSCC-C
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCEEEEEECCc-CcEEEEEeC-CCce-e
Confidence 456667778889999999999887766 22 233333334455555444 4678999999853 466666664 2222 1
Q ss_pred EeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCC-Cc---ceeEEEEcCCccEEEecccc
Q 031924 86 ALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EY---PIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 86 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~---~i~~~~~~~~~~~l~s~~~~ 144 (150)
.+ .++++.|+.+..++.|+++|..+.+.+..+.... .. .++.+.|. +|+..+....+
T Consensus 140 GL-t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s 200 (268)
T 3nok_A 140 GL-CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHS 200 (268)
T ss_dssp CE-EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTC
T ss_pred EE-ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCC
Confidence 22 2456666666678999999999988777764311 11 14556766 66666554333
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.71 E-value=2.8e-06 Score=54.28 Aligned_cols=133 Identities=12% Similarity=0.030 Sum_probs=88.0
Q ss_pred cCcceEE-EEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc-cccc
Q 031924 5 ADAMKLL-GTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPN 82 (150)
Q Consensus 5 ~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~~ 82 (150)
++++.|+ ....++.+.+||.++.+.+.++..... ...+.++++.|+.+..++.|.++|..+. +...++.- ....
T Consensus 103 ~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e---GwGLt~Dg~~L~vSdGs~~l~~iDp~T~-~v~~~I~V~~~g~ 178 (268)
T 3nok_A 103 SDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE---GWGLCYWNGKLVRSDGGTMLTFHEPDGF-ALVGAVQVKLRGQ 178 (268)
T ss_dssp ECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC---CCCEEEETTEEEEECSSSEEEEECTTTC-CEEEEEECEETTE
T ss_pred EeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc---eeEEecCCCEEEEECCCCEEEEEcCCCC-eEEEEEEeCCCCc
Confidence 3444444 445789999999999998877764322 2333467888888877899999998643 55555432 0122
Q ss_pred c---eeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCC------------CCcceeEEEEcCCcc-EEEec
Q 031924 83 S---VDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------SEYPIESLGIASVLC-FINSG 141 (150)
Q Consensus 83 ~---v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~-~l~s~ 141 (150)
. ++-+...+|++.+....+..|.+.|+.+++.+..+... ...-.+.++++|+++ +++||
T Consensus 179 ~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 179 PVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 2 22333457877766667889999999999987776421 112368899999754 55554
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.70 E-value=9e-08 Score=67.46 Aligned_cols=122 Identities=9% Similarity=0.012 Sum_probs=76.3
Q ss_pred eEEEEEcCC--Cee-eeeeccCCCcEEEEEEEeCCCEEEeec-CCCeEEEEEcccccc-----------ccccccccccc
Q 031924 18 TLSVCNLRK--NTV-QTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKD-----------CSDRFVGLSPN 82 (150)
Q Consensus 18 ~i~i~d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~~~~~~~~-----------~~~~~~~~~~~ 82 (150)
.|.+.|.++ ++. +..+.. .....++.++|||+++++.+ .+.++.++|+..... ....... ...
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~g 332 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLG 332 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSC
T ss_pred cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCC
Confidence 366777766 333 333332 23457899999999886655 678999999963311 1222222 233
Q ss_pred ceeEeeecCCCEEEEecCCCcEEEEeccC----------CeeeeeccCCCCcce-----eEEEEcCCccEEEecc
Q 031924 83 SVDALLKLDEDRVITGSENGLISLVGILP----------NRIIQPIAEHSEYPI-----ESLGIASVLCFINSGF 142 (150)
Q Consensus 83 ~v~~~~~~~~~~l~~~~~dg~i~~~d~~~----------~~~~~~~~~~~~~~i-----~~~~~~~~~~~l~s~~ 142 (150)
+......++|....+...|++|..||+.. .+.+..+..|-. |- ..+.++|||++|.+..
T Consensus 333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq-pGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ-PGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC-EEEEEETTTTSTTCCSSEEEEEE
T ss_pred cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccc-cccceeccceEeCCCCCEEEEcC
Confidence 33334478886556677899999999876 456666655533 21 2235579999988654
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.70 E-value=1.4e-06 Score=59.71 Aligned_cols=136 Identities=8% Similarity=0.034 Sum_probs=88.7
Q ss_pred cCcceEEEE-cCCCeEEEEEcCCC----eeeeeec------c-CCCcEEEEEEEeCCCEEEeecCC------CeEEEEEc
Q 031924 5 ADAMKLLGT-SGDGTLSVCNLRKN----TVQTRSE------F-SEEELTSVVLMKNGRKVVCGSQS------GTVLLYSW 66 (150)
Q Consensus 5 ~~~~~l~~~-~~d~~i~i~d~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~~~ 66 (150)
+++++|+.. ..++.|.++|+.+. +..+.++ . .......+...|+| .+++...+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 677777665 47899999999754 4455552 1 11245677888999 55554443 78999997
Q ss_pred cccccccccccc-cccccee-Eee-ecCCCEEEEec-------------------CCCcEEEEeccCCeeeeeccCC-CC
Q 031924 67 GYFKDCSDRFVG-LSPNSVD-ALL-KLDEDRVITGS-------------------ENGLISLVGILPNRIIQPIAEH-SE 123 (150)
Q Consensus 67 ~~~~~~~~~~~~-~~~~~v~-~~~-~~~~~~l~~~~-------------------~dg~i~~~d~~~~~~~~~~~~~-~~ 123 (150)
.+ .+.+.++.. ..+..+. .+. +++++.+++.. ...+|.+||+.+++.++++... .+
T Consensus 172 ~T-~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YS-FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TT-CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CC-CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 53 366666642 0221111 243 88888888874 3689999999988888877543 22
Q ss_pred cceeEEEE--cCCccEEEecc
Q 031924 124 YPIESLGI--ASVLCFINSGF 142 (150)
Q Consensus 124 ~~i~~~~~--~~~~~~l~s~~ 142 (150)
.....++| +|+++++..++
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEE
T ss_pred CccceeEeeECCCCCEEEEEE
Confidence 23555656 99998766554
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.70 E-value=7.6e-08 Score=64.63 Aligned_cols=66 Identities=8% Similarity=-0.128 Sum_probs=51.3
Q ss_pred CeeecCcceEEEEc----------CCCeEEEEEcCCCeeeeeeccC-------CCcEEEEEEEeCCCEEEeecC--CCeE
Q 031924 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFS-------EEELTSVVLMKNGRKVVCGSQ--SGTV 61 (150)
Q Consensus 1 i~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i 61 (150)
+.++||+++++++. .++.|.+||..+++.+..+... ......++++|||++++++.. +..+
T Consensus 70 i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v 149 (368)
T 1mda_H 70 AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAA 149 (368)
T ss_dssp EEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEE
T ss_pred eEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeE
Confidence 46899999999886 3789999999999988777532 123568899999999988764 4567
Q ss_pred EE--EEc
Q 031924 62 LL--YSW 66 (150)
Q Consensus 62 ~i--~~~ 66 (150)
.+ +|.
T Consensus 150 ~V~~iD~ 156 (368)
T 1mda_H 150 GLSVPGA 156 (368)
T ss_dssp EEEETTT
T ss_pred EEEEEch
Confidence 77 776
No 236
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=4.3e-06 Score=57.35 Aligned_cols=135 Identities=5% Similarity=0.024 Sum_probs=80.4
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecC-CC----eEEEEEcccccccc-
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-SG----TVLLYSWGYFKDCS- 73 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~i~~~~~~~~~~- 73 (150)
|+++| ++..|+.+...+.|+.+|++.++..... ........+++++++++|+++.. ++ .+..++.. +...
T Consensus 142 lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~--g~~~~ 218 (430)
T 3tc9_A 142 LSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE--SGFKV 218 (430)
T ss_dssp EEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG--GTSCS
T ss_pred EEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC--Cceee
Confidence 46787 4556666655488999999877544333 34556789999999996666654 22 34444432 2221
Q ss_pred -cccccccccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccE-EEe
Q 031924 74 -DRFVGLSPNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCF-INS 140 (150)
Q Consensus 74 -~~~~~~~~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~s 140 (150)
..+.. ... ...+. .+ ++.++++-..++.|+.++...+................++|+|+|++ +++
T Consensus 219 ~~~l~~-~~~-p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 219 ITELTK-GQN-CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp EEEEEE-CSS-CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred eeeecc-CCC-ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 12211 111 22333 66 67777777778899999987665422221111113678999999984 444
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.68 E-value=3e-06 Score=54.08 Aligned_cols=136 Identities=8% Similarity=0.062 Sum_probs=85.0
Q ss_pred eeecCcceEEEEcCCC--eEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec-CCCeEEEEEccccccccccccc
Q 031924 2 TFAADAMKLLGTSGDG--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
.|+ ++.++.+.+.+| .|+++|+++++.+..+.... ........+++..|.... .++.+.+||..+ .+.+.+++.
T Consensus 49 ~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t-~~~~~ti~~ 125 (262)
T 3nol_A 49 FYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRN-LRQVRSFNY 125 (262)
T ss_dssp EEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTT-CCEEEEEEC
T ss_pred EEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECcc-CcEEEEEEC
Confidence 456 555666666655 89999999999887765433 333333444566665554 578999999853 466666664
Q ss_pred ccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCC-Ccc---eeEEEEcCCccEEEecccc
Q 031924 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EYP---IESLGIASVLCFINSGFLS 144 (150)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~~---i~~~~~~~~~~~l~s~~~~ 144 (150)
.... ..+ .++++.|+.+..++.|+++|..+.+.+..+.... +.+ ++.+.|. +|+..+..-.+
T Consensus 126 -~~eG-~gl-t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 126 -DGEG-WGL-THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp -SSCC-CCE-EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred -CCCc-eEE-ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccC
Confidence 2221 122 3456666666667899999999888777764321 112 4456665 66665544333
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.58 E-value=2.3e-05 Score=50.01 Aligned_cols=133 Identities=7% Similarity=-0.009 Sum_probs=80.5
Q ss_pred CeeecCcceEEEEcC---CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEe-ecCCCeEEEEEccccccccccc
Q 031924 1 MTFAADAMKLLGTSG---DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~i~~~~~~~~~~~~~ 76 (150)
++++|++..|+.+.. .+.|..+++..................+++++++..|+. -...+.|.+++.... .....+
T Consensus 127 i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~ 205 (267)
T 1npe_A 127 IVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-GRRKVL 205 (267)
T ss_dssp EEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-EEEEEE
T ss_pred EEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-ceEEEe
Confidence 467886555555443 468888887643222112223346789999998766654 455689999998522 222222
Q ss_pred ccccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc
Q 031924 77 VGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC 136 (150)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (150)
.. ......+....+.++++...++.|..+|..+++.+..+..........+++.|++.
T Consensus 206 ~~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 206 EG--LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EC--CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred cC--CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 22 11223444224555566556789999999989888887543321266788888875
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.51 E-value=4e-05 Score=48.45 Aligned_cols=133 Identities=10% Similarity=0.050 Sum_probs=79.8
Q ss_pred eeecCcceEEEEcCC--CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEee-cCCCeEEEEEccccccccccccc
Q 031924 2 TFAADAMKLLGTSGD--GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
.|++ +.++.+.+.. ..|+.+|+++++.+..+..... .......+.+..|... -.++.+.+||..+ .+.+.+++.
T Consensus 27 ~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t-l~~~~ti~~ 103 (243)
T 3mbr_X 27 FYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLAT-LTPRARFRY 103 (243)
T ss_dssp EEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTT-TEEEEEEEC
T ss_pred EEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCc-CcEEEEEeC
Confidence 4554 4455555544 4899999999998877654332 2233333445555444 4689999999853 466677764
Q ss_pred ccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCC-Cc---ceeEEEEcCCccEEEec
Q 031924 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EY---PIESLGIASVLCFINSG 141 (150)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~---~i~~~~~~~~~~~l~s~ 141 (150)
.... ..++ +++..|+.+..++.|+++|..+.+.+..+.-.. +. .++.+.+. +|+..+..
T Consensus 104 -~~~G-wglt-~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 104 -PGEG-WALT-SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp -SSCC-CEEE-ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred -CCCc-eEEe-eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence 3222 2333 445555555668899999999888777664321 11 14445554 55555443
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.51 E-value=8.3e-08 Score=64.43 Aligned_cols=122 Identities=12% Similarity=-0.028 Sum_probs=65.7
Q ss_pred CcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccccccee
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVD 85 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~ 85 (150)
++..+++++.++.+..||.++|+.+..+..+. ...++|++..+++++.++.++.||.+ .++...++.. .. ..
T Consensus 91 ~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~-tG~~~W~~~~-~~--~~ 162 (369)
T 2hz6_A 91 SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTK-TRELRWNATY-FD--YA 162 (369)
T ss_dssp ----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSS-SSSCCCEEEE-EE--EC
T ss_pred cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECC-CCCEEEeEec-cc--cc
Confidence 34567777789999999999998876665443 23456688889999999999999985 3455444432 11 11
Q ss_pred Eee-ecC---CCEEEEecCCCcEEEEeccCCeeeeeccCCCCcce-eEEEEcCCccE
Q 031924 86 ALL-KLD---EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPI-ESLGIASVLCF 137 (150)
Q Consensus 86 ~~~-~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~ 137 (150)
... ..+ +..+++++.||.++.||..+++.+...... . ++ ....++++|..
T Consensus 163 ~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~-pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 163 ASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-S-PVVAFYVWQREGLR 217 (369)
T ss_dssp CBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-S-CEEEEEECTTSSCE
T ss_pred CccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-C-ceEEEEEecCCceE
Confidence 111 221 156777888999999999999887776432 3 33 34456667753
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.50 E-value=7.3e-06 Score=58.02 Aligned_cols=139 Identities=9% Similarity=-0.002 Sum_probs=88.4
Q ss_pred cCcceEEEEc------------------CCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCC-------
Q 031924 5 ADAMKLLGTS------------------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG------- 59 (150)
Q Consensus 5 ~~~~~l~~~~------------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------- 59 (150)
|+++++++++ .++.+.++|.++.+...++.-.. ....++++|+|+++++.+.+.
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~ 223 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLP 223 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHH
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchh
Confidence 8888888883 35689999999998877765322 346778899999998887553
Q ss_pred --------eEEEEE-----------------------cccc-ccc-ccccccccccceeEeeecCCCEEEEec-CCCcEE
Q 031924 60 --------TVLLYS-----------------------WGYF-KDC-SDRFVGLSPNSVDALLKLDEDRVITGS-ENGLIS 105 (150)
Q Consensus 60 --------~i~i~~-----------------------~~~~-~~~-~~~~~~~~~~~v~~~~~~~~~~l~~~~-~dg~i~ 105 (150)
.+.++| .+.. ++. ...++. ...+--...+|+|+++++++ .+.+|.
T Consensus 224 ~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~Vs 302 (595)
T 1fwx_A 224 EMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVT 302 (595)
T ss_dssp HHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEE
T ss_pred hccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEE
Confidence 244444 3210 111 222322 12222223388999776665 578999
Q ss_pred EEeccCCe------------eeeeccCCCCcceeEEEEcCCccEEEeccccccc
Q 031924 106 LVGILPNR------------IIQPIAEHSEYPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 106 ~~d~~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
++|+.+.+ ....+. .+.....++|+|+|....+...+..|
T Consensus 303 Vid~~~~~~~~~~~l~~~~~v~~~v~--vG~gP~h~aF~~dG~aY~t~~ldsqV 354 (595)
T 1fwx_A 303 VLDVTRFDAVFYENADPRSAVVAEPE--LGLGPLHTAFDGRGNAYTSLFLDSQV 354 (595)
T ss_dssp EEEGGGHHHHHHSCCCGGGGEEECCB--CCSCEEEEEECTTSEEEEEETTTTEE
T ss_pred EEECcccccccccccCcccceEEEcC--CCCCcceEEECCCCeEEEEEecCCcE
Confidence 99998642 233332 22358889999999666666666554
No 242
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.46 E-value=1.1e-05 Score=57.18 Aligned_cols=128 Identities=9% Similarity=-0.061 Sum_probs=80.3
Q ss_pred eEEEEcCCCeEEEEEcCCCeeeeeeccCC-------------CcE--------------------------EEEEEEeCC
Q 031924 9 KLLGTSGDGTLSVCNLRKNTVQTRSEFSE-------------EEL--------------------------TSVVLMKNG 49 (150)
Q Consensus 9 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~~~~ 49 (150)
.++.++.+|.+.++|.++++.+....... .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 56678889999999999998775543211 111 235778876
Q ss_pred CEEEeec-------------------------------------CCCeEEEEEcccccccccccccccccceeEe-eecC
Q 031924 50 RKVVCGS-------------------------------------QSGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKLD 91 (150)
Q Consensus 50 ~~l~~~~-------------------------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~-~~~~ 91 (150)
..+++.. .+|.+..||.. .++..-++.. . ..+... ....
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~-tG~~~W~~~~-~-~~~~~~~~~t~ 474 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLT-TGKAKWTKWE-K-FAAWGGTLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTT-TCCEEEEEEE-S-SCCCSBCEEET
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECC-CCCEEEEecC-C-CCccceeEEEC
Confidence 6666543 34788888875 3455444432 1 112111 1334
Q ss_pred CCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEE
Q 031924 92 EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFIN 139 (150)
Q Consensus 92 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (150)
+..++.++.|+.++.+|.++++.+..+.......-.-+.+..+|+.++
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 667778999999999999999988877543321122244667776544
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.43 E-value=1.9e-05 Score=57.32 Aligned_cols=71 Identities=10% Similarity=0.151 Sum_probs=49.6
Q ss_pred eeecCcceEEEEcCCCe-------------------EEEEEcCCCeeeeeecc--CC-------CcEEEEEEEeCCC---
Q 031924 2 TFAADAMKLLGTSGDGT-------------------LSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNGR--- 50 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~-------------------i~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~--- 50 (150)
+++|+..+++.+..++. |..+|.++|+.+...+. +. .+........+|+
T Consensus 241 ~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~ 320 (689)
T 1yiq_A 241 AYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRK 320 (689)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred eEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEE
Confidence 46777888888887764 99999999998876653 21 1222223334665
Q ss_pred EEEeecCCCeEEEEEcccccccc
Q 031924 51 KVVCGSQSGTVLLYSWGYFKDCS 73 (150)
Q Consensus 51 ~l~~~~~d~~i~i~~~~~~~~~~ 73 (150)
.++.++.+|.++++|.+ .++.+
T Consensus 321 ~v~~~~~~G~l~~lD~~-tG~~l 342 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRA-TGELL 342 (689)
T ss_dssp EEEECCTTSEEEEEETT-TCCEE
T ss_pred EEEEECCCCeEEEEECC-CCCEe
Confidence 78899999999999975 44443
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.42 E-value=4.3e-05 Score=50.13 Aligned_cols=134 Identities=8% Similarity=-0.041 Sum_probs=78.7
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeec-c------------------CCCcEEEEEEEe-CCCEEEeecCCCe
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSE-F------------------SEEELTSVVLMK-NGRKVVCGSQSGT 60 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~------------------~~~~v~~~~~~~-~~~~l~~~~~d~~ 60 (150)
++|++++++++++..++.|..|+...++...... . .......+++.+ +++ |+++...+.
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~~ 102 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYYH 102 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTTE
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCCC
Confidence 4678888878888889999999987654332111 0 013578899997 555 555544455
Q ss_pred EEEEEcccccccccccc----cccccceeEee-ec-CCCEEEEecC-----------------CCcEEEEeccCCeeeee
Q 031924 61 VLLYSWGYFKDCSDRFV----GLSPNSVDALL-KL-DEDRVITGSE-----------------NGLISLVGILPNRIIQP 117 (150)
Q Consensus 61 i~i~~~~~~~~~~~~~~----~~~~~~v~~~~-~~-~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~ 117 (150)
+..+|.. .+. ...+. +........+. .+ +|++.++-.. ++.|..+|..+++....
T Consensus 103 i~~~d~~-~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 103 LSVVGSE-GGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEECTT-CEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred EEEEeCC-CCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 7888864 222 22221 10112234455 67 7777766432 36788888866654322
Q ss_pred ccCCCCcceeEEEEcCCccEEE
Q 031924 118 IAEHSEYPIESLGIASVLCFIN 139 (150)
Q Consensus 118 ~~~~~~~~i~~~~~~~~~~~l~ 139 (150)
... .. ....++++|+|+.|.
T Consensus 181 ~~~-~~-~p~gia~~~dg~~ly 200 (322)
T 2fp8_A 181 LKE-LH-VPGGAEVSADSSFVL 200 (322)
T ss_dssp EEE-ES-CCCEEEECTTSSEEE
T ss_pred ccC-Cc-cCcceEECCCCCEEE
Confidence 211 12 256789999987544
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.39 E-value=9.2e-05 Score=47.22 Aligned_cols=141 Identities=10% Similarity=-0.016 Sum_probs=80.1
Q ss_pred CeeecCcceEEEE-cCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEE-eecCCCeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
++|+++++.|+.+ ..++.|..++...+...............+++++++..++ +-..++.|.++++. +.....+..
T Consensus 41 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~--g~~~~~~~~ 118 (267)
T 1npe_A 41 LAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD--GTQRRVLFD 118 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEEC
T ss_pred EEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC--CCCEEEEEE
Confidence 3677765555544 4678999999876544333333335678999999765554 44566899999975 222222211
Q ss_pred ccccceeEee-ecCCCEE-EEecC--CCcEEEEeccCCeeeeecc-CCCCcceeEEEEcCCccE-EEeccccc
Q 031924 79 LSPNSVDALL-KLDEDRV-ITGSE--NGLISLVGILPNRIIQPIA-EHSEYPIESLGIASVLCF-INSGFLSL 145 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~~l-~~~~~--dg~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~-l~s~~~~~ 145 (150)
........+. .+++..+ ++... .+.|..+++... ....+. .... ....+++++++.. +++-....
T Consensus 119 ~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~-~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 119 TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLG-LPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCS-CEEEEEEETTTTEEEEEETTTT
T ss_pred CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCC-CCcEEEEcCCCCEEEEEECCCC
Confidence 0112334555 6754444 44433 468888887532 222221 2223 3778999997654 44433333
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.38 E-value=8.8e-06 Score=53.18 Aligned_cols=124 Identities=15% Similarity=0.039 Sum_probs=80.7
Q ss_pred cceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccccceeE
Q 031924 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDA 86 (150)
Q Consensus 7 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~ 86 (150)
+..+..++.++.+..+|.. ++...........+.++...+++. +..++.++.+..||.. ++....+.. ....+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~--g~~~~~~~~-~~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD--GTEKWRFKT-NDAITSA 181 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT--SCEEEEEEC-SSCCCSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC--CCEeEEEec-CCCceee
Confidence 3456777788999999988 766655554444555666666666 6667788999999975 444444443 3334444
Q ss_pred ee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEe
Q 031924 87 LL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 87 ~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 140 (150)
+. ..++.+++ ++ +.+..+| .+++.......... .+.++..+++|.+.+.
T Consensus 182 ~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~ 231 (330)
T 3hxj_A 182 ASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYW-TVTRPAISEDGTIYVT 231 (330)
T ss_dssp CEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSC-CCSCCEECTTSCEEEE
T ss_pred eEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCc-ceeceEECCCCeEEEE
Confidence 44 35665444 44 8889999 66666555544434 4777888888766554
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.37 E-value=2e-05 Score=56.96 Aligned_cols=132 Identities=11% Similarity=0.070 Sum_probs=81.4
Q ss_pred eEEEEcCCCeEEEEEcCCCeeeeeeccCC-----------C-cE------------------------EEEEEEeCCCEE
Q 031924 9 KLLGTSGDGTLSVCNLRKNTVQTRSEFSE-----------E-EL------------------------TSVVLMKNGRKV 52 (150)
Q Consensus 9 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----------~-~v------------------------~~~~~~~~~~~l 52 (150)
.++.++.+|.+.++|.++|+.+....... . ++ ..++++|+...+
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~ 395 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV 395 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence 57888899999999999998773322111 0 00 125677775555
Q ss_pred Eee------------------------------------cCCCeEEEEEcccccccccccccccccceeEeeecCCCEEE
Q 031924 53 VCG------------------------------------SQSGTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVI 96 (150)
Q Consensus 53 ~~~------------------------------------~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 96 (150)
++. ..+|.|..||+. .++..-+... ............+.+++
T Consensus 396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~-tG~~~W~~~~-~~~~~~~~~~t~gg~vf 473 (668)
T 1kv9_A 396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPV-KQKAAWKVPY-PTHWNGGTLSTAGNLVF 473 (668)
T ss_dssp EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETT-TTEEEEEEEE-SSSCCCCEEEETTTEEE
T ss_pred EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCC-CCcEEEEccC-CCCCcCceeEeCCCEEE
Confidence 431 134789999985 4455544433 22111122244677888
Q ss_pred EecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc-EEEecc
Q 031924 97 TGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC-FINSGF 142 (150)
Q Consensus 97 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~ 142 (150)
.++.|+.++.||.++++.+..+.........-+.+..+|+ +++.+.
T Consensus 474 ~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 474 QGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred EECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 8999999999999999988877544321112344556666 555443
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.36 E-value=3e-05 Score=51.81 Aligned_cols=110 Identities=10% Similarity=0.042 Sum_probs=72.6
Q ss_pred CcceEEEEcCCCeEEEEEcCCCeeeeeeccC---------CCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccc
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFS---------EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 76 (150)
.+..+++++.++.|..+|.++++.+...... ...+.+ ....++..+++++.++.+..+|.. .++..-+.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~-tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTS-DGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETT-TCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECC-CCCEEEEE
Confidence 4567888888999999999999887655432 122222 222346678888899999999975 34544444
Q ss_pred ccccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeecc
Q 031924 77 VGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIA 119 (150)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 119 (150)
.. .. .+.......+..++.++.++.+..+|..+++.+....
T Consensus 130 ~~-~~-~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~ 170 (376)
T 3q7m_A 130 KV-AG-EALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVN 170 (376)
T ss_dssp EC-SS-CCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eC-CC-ceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEe
Confidence 32 21 1211111124577888889999999999988776654
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.36 E-value=8.7e-06 Score=53.20 Aligned_cols=132 Identities=14% Similarity=-0.001 Sum_probs=80.7
Q ss_pred cCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccccce
Q 031924 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (150)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v 84 (150)
+++. +..++ +.+..+| .+++...........+.++...++|. +..++.++.+..++.. ++....+.. .....
T Consensus 186 ~~g~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~--g~~~~~~~~-~~~~~ 257 (330)
T 3hxj_A 186 KDGT-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD--GTEKWRFKT-GKRIE 257 (330)
T ss_dssp TTCC-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT--SCEEEEEEC-SSCCC
T ss_pred CCCE-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC--CCEeEEeeC-CCCcc
Confidence 4554 44444 7889999 67766665555555677777777765 5666677888888742 344444433 22222
Q ss_pred eEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEeccccccc
Q 031924 85 DALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 85 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
..+....+..+..++.+|.+..+|. +++.+..+..... .+.++..+++|++.+ |+.++.+
T Consensus 258 ~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~-~~~~~~~d~~g~l~~-gt~~G~~ 317 (330)
T 3hxj_A 258 SSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFETGSW-IIATPVIDENGTIYF-GTRNGKF 317 (330)
T ss_dssp SCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEECSSC-CCSCCEECTTCCEEE-ECTTSCE
T ss_pred ccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEcCCc-cccceEEcCCCEEEE-EcCCCeE
Confidence 3333222446667788889999996 5665555544333 477788888887665 4444433
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.36 E-value=2.8e-05 Score=56.29 Aligned_cols=143 Identities=9% Similarity=0.095 Sum_probs=90.2
Q ss_pred eeecCcceEEEEcCCC-------------------eEEEEEcCCCeeeeeecc--CC-------CcEEEEEEEeCC---C
Q 031924 2 TFAADAMKLLGTSGDG-------------------TLSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNG---R 50 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~-------------------~i~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~ 50 (150)
+++|++..++.+..++ .|..+|.++++.+...+. +. ....-+....+| .
T Consensus 249 ~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~ 328 (677)
T 1kb0_A 249 TFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRK 328 (677)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEE
T ss_pred eEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEee
Confidence 4677888888887664 599999999998766543 21 122333444577 6
Q ss_pred EEEeecCCCeEEEEEcccccccccccccccc-c----------ce------------------------eEee-ecCCCE
Q 031924 51 KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP-N----------SV------------------------DALL-KLDEDR 94 (150)
Q Consensus 51 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~----------~v------------------------~~~~-~~~~~~ 94 (150)
.++.++.+|.++++|.. .++.+..+.. .+ . .+ ..+. ++++.+
T Consensus 329 ~l~~~~~~G~l~~lD~~-tG~~l~~~~~-~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~ 406 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRT-NGKFISAKNF-VPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL 406 (677)
T ss_dssp EEEECCTTSEEEEEETT-TCCEEEEEES-SCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred EEEEECCCCEEEEEECC-CCCEeccccc-cccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE
Confidence 78999999999999975 4454433321 10 0 00 0122 566666
Q ss_pred EEEecC-------------------------------------------CCcEEEEeccCCeeeeeccCCCCcceeEEEE
Q 031924 95 VITGSE-------------------------------------------NGLISLVGILPNRIIQPIAEHSEYPIESLGI 131 (150)
Q Consensus 95 l~~~~~-------------------------------------------dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~ 131 (150)
+++... .|.|..||+.+++.+..+... . ++....+
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~-~~~~g~~ 484 (677)
T 1kb0_A 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-S-PWNGGTL 484 (677)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-S-SCCCCEE
T ss_pred EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-C-CCcCcce
Confidence 666432 278999999999988777432 2 3444456
Q ss_pred cCCccEEEecccccccc
Q 031924 132 ASVLCFINSGFLSLNVN 148 (150)
Q Consensus 132 ~~~~~~l~s~~~~~~v~ 148 (150)
..++..++.++.++.+.
T Consensus 485 ~~~g~~v~~g~~dg~l~ 501 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLV 501 (677)
T ss_dssp EETTTEEEEECTTSEEE
T ss_pred EeCCCEEEEECCCCcEE
Confidence 66666777677666554
No 251
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.32 E-value=2.3e-05 Score=55.77 Aligned_cols=80 Identities=9% Similarity=-0.015 Sum_probs=49.7
Q ss_pred CCeEEEEEcccccccccccccccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc-
Q 031924 58 SGTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC- 136 (150)
Q Consensus 58 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 136 (150)
+|.|..||+. .++..-+.+. ............+.+++.++.|+.++.||.++++.+..+.........-+.|..+|+
T Consensus 465 ~G~l~A~D~~-tG~~~W~~~~-~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPV-SGKVVWEHKE-HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTT-TCCEEEEEEE-SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECC-CCCEEEEecC-CCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 5788888875 3454444332 211111111234678888999999999999999998887554331122366777886
Q ss_pred EEE
Q 031924 137 FIN 139 (150)
Q Consensus 137 ~l~ 139 (150)
|++
T Consensus 543 Yv~ 545 (582)
T 1flg_A 543 YLG 545 (582)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 252
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.30 E-value=5.4e-05 Score=50.60 Aligned_cols=108 Identities=12% Similarity=0.198 Sum_probs=72.0
Q ss_pred cceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccccceeE
Q 031924 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDA 86 (150)
Q Consensus 7 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~ 86 (150)
+..++.++.++.+..+|.++++.+..... .....+.. ++..++.++.++.+..+|.. .++...+...........
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~-tG~~~w~~~~~~~~~~~~ 313 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTID-GGVTLWTQSDLLHRLLTS 313 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETT-TCCEEEEECTTTTSCCCC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECC-CCcEEEeecccCCCcccC
Confidence 45677777899999999999987765542 22333333 46778888889999999985 344443332101111111
Q ss_pred eeecCCCEEEEecCCCcEEEEeccCCeeeeeccC
Q 031924 87 LLKLDEDRVITGSENGLISLVGILPNRIIQPIAE 120 (150)
Q Consensus 87 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 120 (150)
.. ..+..++.++.+|.++.+|..+++.+.....
T Consensus 314 ~~-~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 314 PV-LYNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp CE-EETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CE-EECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 21 2356788888999999999999988776644
No 253
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.24 E-value=2.9e-05 Score=56.86 Aligned_cols=136 Identities=7% Similarity=-0.000 Sum_probs=74.9
Q ss_pred eee-cCcceEEEEc-CC----CeEEEEEcCCC-eeee-eeccCCCcEEEEEEEeCCCEEEeecCC-----CeEEEEEccc
Q 031924 2 TFA-ADAMKLLGTS-GD----GTLSVCNLRKN-TVQT-RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGY 68 (150)
Q Consensus 2 ~~~-~~~~~l~~~~-~d----~~i~i~d~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~ 68 (150)
.|| ||+++|+.+. .+ .+|+++|+.++ +.+. .+. .....+.|+|||+.|+....+ ..|..+++..
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt 256 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGK 256 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTS
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCC
Confidence 589 9999888653 22 35999999988 6321 111 123467899999888766554 2567777653
Q ss_pred cccc-ccccccccccceeEee-ecCCCEEEEecC---CCcEEEEeccCCe-ee--eeccCCCCcceeEEEEcCCccEEEe
Q 031924 69 FKDC-SDRFVGLSPNSVDALL-KLDEDRVITGSE---NGLISLVGILPNR-II--QPIAEHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 69 ~~~~-~~~~~~~~~~~v~~~~-~~~~~~l~~~~~---dg~i~~~d~~~~~-~~--~~~~~~~~~~i~~~~~~~~~~~l~s 140 (150)
.... ...+............ +++|+.|+..+. ...|+++|+.++. .. ..+......+...+.|+.++.+++.
T Consensus 257 ~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~ 336 (751)
T 2xe4_A 257 LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVIL 336 (751)
T ss_dssp CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEE
T ss_pred CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEE
Confidence 2111 1111110122233333 889998776553 3468888887642 12 3332222223445555444444444
No 254
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.23 E-value=6.3e-06 Score=55.39 Aligned_cols=90 Identities=10% Similarity=-0.188 Sum_probs=66.6
Q ss_pred eEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec----------CCCeEEEEEccccccccccccccc-------
Q 031924 18 TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGYFKDCSDRFVGLS------- 80 (150)
Q Consensus 18 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~~------- 80 (150)
+|.++|..+++.+.++.....+ .+.++||+++++++. .++.|.+||..+ .+...++.. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T-~~vv~~I~v-~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT-FLPIADIEL-PDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT-CCEEEEEEE-TTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC-CCEEEEEEC-CCcccccc
Confidence 8889999999998888755555 799999999998876 368999999864 466666643 2
Q ss_pred -ccceeEeeecCCCEEEEecC--CCcEEE--EeccC
Q 031924 81 -PNSVDALLKLDEDRVITGSE--NGLISL--VGILP 111 (150)
Q Consensus 81 -~~~v~~~~~~~~~~l~~~~~--dg~i~~--~d~~~ 111 (150)
..+-....+++|++++.+.. +..+.+ +|+.+
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 12223334899998888764 457888 88865
No 255
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.22 E-value=0.00026 Score=49.41 Aligned_cols=136 Identities=7% Similarity=0.098 Sum_probs=78.6
Q ss_pred Ceeec-CcceEEEE-cCCCeEEEEEcCCCeeeeeecc---CCCcEEEEEE-------EeCCCEEEeecCCC-------eE
Q 031924 1 MTFAA-DAMKLLGT-SGDGTLSVCNLRKNTVQTRSEF---SEEELTSVVL-------MKNGRKVVCGSQSG-------TV 61 (150)
Q Consensus 1 i~~~~-~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~~~~~d~-------~i 61 (150)
|+|+| +...|+.+ ...+.|++.|.+.+........ .......++| ++++++++++...+ .+
T Consensus 144 la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V 223 (496)
T 3kya_A 144 LAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSV 223 (496)
T ss_dssp EEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEE
T ss_pred EEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceE
Confidence 46888 34444444 4457799999988765543332 1235899999 99999777665543 25
Q ss_pred EEEEcccccccc-----cccccccccceeEeeec-CCCEEEEecCCCcEEEEecc-------CCee-----------eee
Q 031924 62 LLYSWGYFKDCS-----DRFVGLSPNSVDALLKL-DEDRVITGSENGLISLVGIL-------PNRI-----------IQP 117 (150)
Q Consensus 62 ~i~~~~~~~~~~-----~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~~~d~~-------~~~~-----------~~~ 117 (150)
.+++....+... +.+.. ...+......+ ++.++++-..++.|+.+|+. ++.. ...
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~ 302 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQ 302 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEE
T ss_pred EEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccce
Confidence 566533212221 12221 11122222256 56667777788899999987 4443 111
Q ss_pred -ccCCCCcceeEEEEcCCccE
Q 031924 118 -IAEHSEYPIESLGIASVLCF 137 (150)
Q Consensus 118 -~~~~~~~~i~~~~~~~~~~~ 137 (150)
+..........++|+|+|++
T Consensus 303 l~~~~~~~~p~~ia~~p~G~~ 323 (496)
T 3kya_A 303 LFTIADPSWEFQIFIHPTGKY 323 (496)
T ss_dssp EEECSSSSCCEEEEECTTSSE
T ss_pred eEecCCCCCceEEEEcCCCCE
Confidence 11111213578999999984
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.19 E-value=0.00014 Score=52.04 Aligned_cols=79 Identities=11% Similarity=-0.006 Sum_probs=47.4
Q ss_pred CCeEEEEEccccccccccccccccccee-EeeecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc
Q 031924 58 SGTVLLYSWGYFKDCSDRFVGLSPNSVD-ALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC 136 (150)
Q Consensus 58 d~~i~i~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (150)
.|.+..||+. .++..-+.+. ..+.. ......+.+++.++.|+.++.+|.++++.+..+.........-+.+..+|+
T Consensus 452 ~G~l~A~D~~-tG~~~W~~~~--~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~ 528 (599)
T 1w6s_A 452 LGQIKAYNAI-TGDYKWEKME--RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT 528 (599)
T ss_dssp CEEEEEECTT-TCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cCeEEEEECC-CCCEEeEecC--CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCE
Confidence 4677777774 3344433321 11111 112335677888999999999999999988877543321123356667776
Q ss_pred -EEE
Q 031924 137 -FIN 139 (150)
Q Consensus 137 -~l~ 139 (150)
|++
T Consensus 529 qyv~ 532 (599)
T 1w6s_A 529 QYVA 532 (599)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 444
No 257
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.15 E-value=0.00024 Score=48.79 Aligned_cols=132 Identities=10% Similarity=0.062 Sum_probs=73.7
Q ss_pred CeeecC--cceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCC----Ce-EEEEEcccccccc
Q 031924 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----GT-VLLYSWGYFKDCS 73 (150)
Q Consensus 1 i~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~-i~i~~~~~~~~~~ 73 (150)
|+|+|+ +..|+.+...+.|+.+|..+++.... .........++++++|+ |+.+... .. +..++.. +...
T Consensus 144 vavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~--~~~~ 219 (433)
T 4hw6_A 144 MMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA--SGFT 219 (433)
T ss_dssp EEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG--GTTC
T ss_pred EEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC--CCee
Confidence 467774 34455554448999999988765443 33455689999999999 5444432 12 3333321 1111
Q ss_pred --cccccccccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeec-cCCCCcceeEEEEcCCccEE
Q 031924 74 --DRFVGLSPNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPI-AEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 74 --~~~~~~~~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l 138 (150)
..+.. ......+. .+ ++.++++-..++.|+.+|..++.....+ ..........++|+|++++|
T Consensus 220 ~~~~~~~--~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~L 287 (433)
T 4hw6_A 220 ERLSLCN--ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWA 287 (433)
T ss_dssp CEEEEEE--CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEE
T ss_pred ccccccc--cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEE
Confidence 11111 11122233 55 6677767667889999998766552222 11111113469999999833
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.06 E-value=0.0003 Score=46.08 Aligned_cols=140 Identities=11% Similarity=0.024 Sum_probs=79.9
Q ss_pred eeec-CcceEEEEcC-----------------CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEee-cCCCeEE
Q 031924 2 TFAA-DAMKLLGTSG-----------------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVL 62 (150)
Q Consensus 2 ~~~~-~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~ 62 (150)
++++ ++++.++-.. ++.|..||..+++...... .......++++++++.|+.+ +.++.|.
T Consensus 132 ~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~ 210 (322)
T 2fp8_A 132 TVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIV 210 (322)
T ss_dssp EECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEE
T ss_pred EEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEE
Confidence 4667 7766665432 3678888877665432222 12334678999999866555 5668999
Q ss_pred EEEccccc-ccccccccccccceeEee-ecCCCEEEEecC----------CCcEEEEeccCCeeeeeccCCCC---ccee
Q 031924 63 LYSWGYFK-DCSDRFVGLSPNSVDALL-KLDEDRVITGSE----------NGLISLVGILPNRIIQPIAEHSE---YPIE 127 (150)
Q Consensus 63 i~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~l~~~~~----------dg~i~~~d~~~~~~~~~~~~~~~---~~i~ 127 (150)
+|++.... .....+.. .+. ...+. .++|++.++... .+.|..+|.. ++.+..+....+ ..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~ 287 (322)
T 2fp8_A 211 KYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFE 287 (322)
T ss_dssp EEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCC
T ss_pred EEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccce
Confidence 99975211 01111111 122 34454 678887766544 4678888874 666655543221 1266
Q ss_pred EEEEcCCccEEEecccccc
Q 031924 128 SLGIASVLCFINSGFLSLN 146 (150)
Q Consensus 128 ~~~~~~~~~~l~s~~~~~~ 146 (150)
.+++ .+++++++......
T Consensus 288 ~~~~-~~g~L~v~~~~~~~ 305 (322)
T 2fp8_A 288 QIQE-HDGLLYIGTLFHGS 305 (322)
T ss_dssp EEEE-ETTEEEEECSSCSE
T ss_pred EEEE-eCCEEEEeecCCCc
Confidence 6666 46776666544433
No 259
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.02 E-value=0.00066 Score=44.88 Aligned_cols=145 Identities=6% Similarity=-0.050 Sum_probs=85.8
Q ss_pred eeecCcceEE-EEcCCCeEEEEEcCCCeeeee-ecc----CC--CcEEEEEE---EeCCCEEEeec-------------C
Q 031924 2 TFAADAMKLL-GTSGDGTLSVCNLRKNTVQTR-SEF----SE--EELTSVVL---MKNGRKVVCGS-------------Q 57 (150)
Q Consensus 2 ~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~-~~~----~~--~~v~~~~~---~~~~~~l~~~~-------------~ 57 (150)
+|++....+. +.-..++|..||...+..... +.. .+ .....+.| .|+++.+++.. .
T Consensus 19 ~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 19 IYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSS
T ss_pred cCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCC
Confidence 5776444444 445899999999876543322 221 11 14689999 68887777543 2
Q ss_pred CCeEEEEEccc--ccccccccc--ccc---------c-cceeEee-ecCCCEEEEecCC-CcEEEEeccCCeeeeec--c
Q 031924 58 SGTVLLYSWGY--FKDCSDRFV--GLS---------P-NSVDALL-KLDEDRVITGSEN-GLISLVGILPNRIIQPI--A 119 (150)
Q Consensus 58 d~~i~i~~~~~--~~~~~~~~~--~~~---------~-~~v~~~~-~~~~~~l~~~~~d-g~i~~~d~~~~~~~~~~--~ 119 (150)
+..+..||+.- .++...... ... . .....+. .++|+..++++.- +.|..++...... ..+ .
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~-~~~~~~ 177 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV-STFAWE 177 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE-EEEEEC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE-eeeeec
Confidence 57788999850 123322221 100 1 1234455 7889999888887 8888777754322 221 1
Q ss_pred ---CCCCcceeEEEEcCCccEEEeccccccc
Q 031924 120 ---EHSEYPIESLGIASVLCFINSGFLSLNV 147 (150)
Q Consensus 120 ---~~~~~~i~~~~~~~~~~~l~s~~~~~~v 147 (150)
.......+.++++|+|..|+.....+.+
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L 208 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRAL 208 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESSSSSE
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcCCCeE
Confidence 1111236789999999877665445544
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.00 E-value=0.00076 Score=49.50 Aligned_cols=111 Identities=10% Similarity=-0.015 Sum_probs=61.2
Q ss_pred CeeecCcceEEEEcCC-----CeEEEEEcCCCee--eeeec-cCCCcEEEEEEEeCCCEEEeec---CCCeEEEEEcccc
Q 031924 1 MTFAADAMKLLGTSGD-----GTLSVCNLRKNTV--QTRSE-FSEEELTSVVLMKNGRKVVCGS---QSGTVLLYSWGYF 69 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~~~~~~ 69 (150)
+.|+||++.|+....+ ..|..+++.++.. ..... ........+.|+|||++|+... ....+.++|+...
T Consensus 226 ~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 226 IVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 4799999888776654 3688888877532 11222 2234567889999999887554 2346777787532
Q ss_pred cccc--cccccccccceeEeeecCCCEE-EEecCC----CcEEEEeccC
Q 031924 70 KDCS--DRFVGLSPNSVDALLKLDEDRV-ITGSEN----GLISLVGILP 111 (150)
Q Consensus 70 ~~~~--~~~~~~~~~~v~~~~~~~~~~l-~~~~~d----g~i~~~d~~~ 111 (150)
.... ..+...............++.| +....+ ..|..+++.+
T Consensus 306 ~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 306 NAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 1112 2232202233333331335544 444333 2566667654
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.97 E-value=0.00035 Score=50.59 Aligned_cols=71 Identities=10% Similarity=0.169 Sum_probs=49.4
Q ss_pred eeecCcceEEEEcCCC-------------------eEEEEEcCCCeeeeeecc--CC-------CcEEEEEEEeCCC---
Q 031924 2 TFAADAMKLLGTSGDG-------------------TLSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNGR--- 50 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~-------------------~i~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~--- 50 (150)
+++|+...++.+..++ .|..+|.++++.+...+. |. .+.....+..+|+
T Consensus 236 a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~ 315 (668)
T 1kv9_A 236 AYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRK 315 (668)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred EEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEE
Confidence 4567777888887766 499999999998866653 21 2333334445665
Q ss_pred EEEeecCCCeEEEEEcccccccc
Q 031924 51 KVVCGSQSGTVLLYSWGYFKDCS 73 (150)
Q Consensus 51 ~l~~~~~d~~i~i~~~~~~~~~~ 73 (150)
.++.++.+|.++++|.. .++.+
T Consensus 316 ~v~~~~~~G~l~~lD~~-tG~~l 337 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRT-NGKLI 337 (668)
T ss_dssp EEEECCTTSEEEEEETT-TCCEE
T ss_pred EEEEECCCCEEEEEECC-CCCEe
Confidence 68899999999999975 44444
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.91 E-value=0.0013 Score=41.98 Aligned_cols=139 Identities=8% Similarity=0.082 Sum_probs=81.4
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCee---eeeec------cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccc--
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV---QTRSE------FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF-- 69 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~-- 69 (150)
|++.+++.++++.-.++.+.++++..... ..... ........++|+|.++.|+++.......+|.+...
T Consensus 75 Ia~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~ 154 (255)
T 3qqz_A 75 IEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLS 154 (255)
T ss_dssp EEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTC
T ss_pred eEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccccc
Confidence 35667777666666778899998765432 12221 12345789999999888877766655566665310
Q ss_pred ccccccc-----cc-ccccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeeccCCCC--------cceeEEEEcC
Q 031924 70 KDCSDRF-----VG-LSPNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSE--------YPIESLGIAS 133 (150)
Q Consensus 70 ~~~~~~~-----~~-~~~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~--------~~i~~~~~~~ 133 (150)
......+ .. ........+. .| .+++++....+..+..+|.. ++.+..+.-..+ .....|+|++
T Consensus 155 ~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 155 SNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA 233 (255)
T ss_dssp SSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT
T ss_pred CCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC
Confidence 0111111 00 0111234444 44 55677777778888889975 444443322111 1378899999
Q ss_pred CccEEEe
Q 031924 134 VLCFINS 140 (150)
Q Consensus 134 ~~~~l~s 140 (150)
+|++.++
T Consensus 234 ~G~lyIv 240 (255)
T 3qqz_A 234 SGNIYIV 240 (255)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 9997766
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.83 E-value=0.0024 Score=42.58 Aligned_cols=134 Identities=11% Similarity=-0.079 Sum_probs=75.3
Q ss_pred CeeecCcceEEEE-cCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEE-EeecCCCeEEEEEccccccccccc-c
Q 031924 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRF-V 77 (150)
Q Consensus 1 i~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~-~ 77 (150)
++|++.+..|+.+ ...+.|..+++..+...............+++.+.+..| ++-...+.|.+.++. +.....+ .
T Consensus 78 l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d--G~~~~~l~~ 155 (349)
T 3v64_C 78 LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD--GAHRKVLLW 155 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEEC
T ss_pred EEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC--CCceEEEEe
Confidence 3577655555544 467788888887654333333333445788998755444 555567889999875 2222222 1
Q ss_pred cccccceeEee-ecC-CCEEEEecCC-CcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE
Q 031924 78 GLSPNSVDALL-KLD-EDRVITGSEN-GLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 78 ~~~~~~v~~~~-~~~-~~~l~~~~~d-g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
. .......+. .|. +.++.+-... +.|..+++........+...-. ....++++|++..|
T Consensus 156 ~-~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~-~PnGla~d~~~~~l 217 (349)
T 3v64_C 156 Q-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLF-WPNGLTIDYAGRRM 217 (349)
T ss_dssp T-TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCS-CEEEEEEETTTTEE
T ss_pred C-CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCC-CcceEEEeCCCCEE
Confidence 2 223345555 664 4455555555 7888888754322222222222 36789999755433
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.82 E-value=0.0027 Score=42.91 Aligned_cols=134 Identities=12% Similarity=-0.068 Sum_probs=74.5
Q ss_pred CeeecCcceEEEE-cCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEE-EeecCCCeEEEEEccccccccccc-c
Q 031924 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRF-V 77 (150)
Q Consensus 1 i~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~-~ 77 (150)
++|++.+..|+.+ ...+.|..+++..+.....+.........+++.+.+..| ++-...+.|.+.++. +.....+ .
T Consensus 121 l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d--g~~~~~l~~ 198 (386)
T 3v65_B 121 LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD--GAHRKVLLW 198 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT--SCSCEEEEC
T ss_pred EEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC--CCceEEeec
Confidence 3577655544444 467788888887664433333333445778888755544 555566788888874 2222222 2
Q ss_pred cccccceeEee-ecCCC-EEEEecCC-CcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE
Q 031924 78 GLSPNSVDALL-KLDED-RVITGSEN-GLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 78 ~~~~~~v~~~~-~~~~~-~l~~~~~d-g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
. .......+. .+.+. ++.+-... +.|..+++............-. ....++++|++..|
T Consensus 199 ~-~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~-~PnGlavd~~~~~l 260 (386)
T 3v65_B 199 Q-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLF-WPNGLTIDYAGRRM 260 (386)
T ss_dssp S-SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS-CEEEEEEEGGGTEE
T ss_pred C-CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCC-CeeeEEEeCCCCEE
Confidence 2 223345555 65444 44554445 7888888754322222222222 36789999755433
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.70 E-value=0.00097 Score=48.14 Aligned_cols=111 Identities=13% Similarity=-0.009 Sum_probs=66.9
Q ss_pred eeec-CcceEEEEcCCC-----------eEEEEEcCCCeee--eeec-cCCCcEEEEEEEeCCCEEEeecC-CCeEEEEE
Q 031924 2 TFAA-DAMKLLGTSGDG-----------TLSVCNLRKNTVQ--TRSE-FSEEELTSVVLMKNGRKVVCGSQ-SGTVLLYS 65 (150)
Q Consensus 2 ~~~~-~~~~l~~~~~d~-----------~i~i~d~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~~ 65 (150)
++.| +++.++.|+.+. .+.+||..+++.. .... .+.....++++..+++.++.|+. +..+.+||
T Consensus 192 av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd 271 (656)
T 1k3i_A 192 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYD 271 (656)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEE
T ss_pred EEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEec
Confidence 3456 777888776432 6889999887532 2222 12223345677788999999884 46899999
Q ss_pred ccccc-ccccccccccccceeEeeecCCCEEEEec-CC-----CcEEEEeccCCe
Q 031924 66 WGYFK-DCSDRFVGLSPNSVDALLKLDEDRVITGS-EN-----GLISLVGILPNR 113 (150)
Q Consensus 66 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~d-----g~i~~~d~~~~~ 113 (150)
..... .....+.. ......+...+++++++.|+ .+ ..+.+||+.+++
T Consensus 272 ~~t~~W~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 272 SSSDSWIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp GGGTEEEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred CcCCceeECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 85321 11122221 11111222245889999988 34 468999987654
No 266
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.70 E-value=0.00078 Score=48.63 Aligned_cols=124 Identities=10% Similarity=-0.075 Sum_probs=67.5
Q ss_pred CeEEEEEcCCCeeeeeeccC---------CCcEEEEEEEe-CCCEEEeecCCC-----------eEEEEEccccccccc-
Q 031924 17 GTLSVCNLRKNTVQTRSEFS---------EEELTSVVLMK-NGRKVVCGSQSG-----------TVLLYSWGYFKDCSD- 74 (150)
Q Consensus 17 ~~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~~~-~~~~l~~~~~d~-----------~i~i~~~~~~~~~~~- 74 (150)
..+..||.++.......... ...-.++.+.. +++.++.|+.++ .+.+||.... ....
T Consensus 369 ~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~ 447 (656)
T 1k3i_A 369 TAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-PNTVF 447 (656)
T ss_dssp SEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-CEEEE
T ss_pred cceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-CeeEE
Confidence 45678888776533221111 11223444443 677778887532 5777776432 2211
Q ss_pred ---ccccccccceeEeeecCCCEEEEecCC-----------CcEEEEeccCCeee--eeccCCCCcceeEEEEcCCccEE
Q 031924 75 ---RFVGLSPNSVDALLKLDEDRVITGSEN-----------GLISLVGILPNRII--QPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 75 ---~~~~~~~~~v~~~~~~~~~~l~~~~~d-----------g~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
.+.. ......++..+++++++.|+.+ ..+.+||+.+.+-. ..+..... ......+.|+|+++
T Consensus 448 ~~~~mp~-~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~-~hs~a~ll~dg~v~ 525 (656)
T 1k3i_A 448 ASNGLYF-ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRV-YHSISLLLPDGRVF 525 (656)
T ss_dssp CTTCCSS-CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCC-TTEEEEECTTSCEE
T ss_pred ccCCCCC-CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccc-cccHhhcCCCcEEE
Confidence 2221 1111222336689999998854 46899999776532 22211111 13345567999999
Q ss_pred Eeccc
Q 031924 139 NSGFL 143 (150)
Q Consensus 139 ~s~~~ 143 (150)
+.|+.
T Consensus 526 v~GG~ 530 (656)
T 1k3i_A 526 NGGGG 530 (656)
T ss_dssp EEECC
T ss_pred ecCCC
Confidence 99884
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=0.0049 Score=42.30 Aligned_cols=146 Identities=10% Similarity=0.049 Sum_probs=82.2
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCCeeeeeec-cCCCcEEEEEEEeCCCEE-EeecCCCeEEEEEcccc-ccc--cc
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYF-KDC--SD 74 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~-~~~--~~ 74 (150)
++++| ++.++++-..++.|..++...+....... ........++|+|+|++| ++-..++.|..++.... +.. ..
T Consensus 231 iavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~ 310 (430)
T 3tc9_A 231 AETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPY 310 (430)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCE
T ss_pred EEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceE
Confidence 35788 56666666678899999998765422222 222356899999999955 45556788999886421 111 11
Q ss_pred cccccc------c---------ccee-Eee-e--------cCCCEEEEecCCCcEEEEeccCCeeeeeccC----C----
Q 031924 75 RFVGLS------P---------NSVD-ALL-K--------LDEDRVITGSENGLISLVGILPNRIIQPIAE----H---- 121 (150)
Q Consensus 75 ~~~~~~------~---------~~v~-~~~-~--------~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----~---- 121 (150)
.+.+ . . .... .++ . .+++++++-..++.|+.++. .++....... .
T Consensus 311 ~~ag-~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~ 388 (430)
T 3tc9_A 311 IVCG-QQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYN 388 (430)
T ss_dssp EEEE-CTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCB
T ss_pred EEec-cCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCccc
Confidence 1111 1 0 0011 122 1 23556666666778888884 4543322211 0
Q ss_pred CC--------cceeEEEEcC-CccEEEecccccccc
Q 031924 122 SE--------YPIESLGIAS-VLCFINSGFLSLNVN 148 (150)
Q Consensus 122 ~~--------~~i~~~~~~~-~~~~l~s~~~~~~v~ 148 (150)
.+ .....++++| ++.++++-..+..|.
T Consensus 389 dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 424 (430)
T 3tc9_A 389 DGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIR 424 (430)
T ss_dssp CEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred CCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEE
Confidence 00 1277899999 577777655555443
No 268
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.60 E-value=0.0029 Score=42.23 Aligned_cols=64 Identities=14% Similarity=0.148 Sum_probs=40.5
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCee--eeeec---cCCCcEEEEEEEeC---CCEEEeecC-C-----CeEEEEEc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV--QTRSE---FSEEELTSVVLMKN---GRKVVCGSQ-S-----GTVLLYSW 66 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i~i~~~ 66 (150)
|+|.|+++++++ ..++.|.+++ .++. +..+. ........++++|+ +..|++... + +.|..|+.
T Consensus 36 ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 36 LAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp EEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred EEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 578899985555 4669999998 4432 11111 12456899999998 555554433 2 56777776
Q ss_pred c
Q 031924 67 G 67 (150)
Q Consensus 67 ~ 67 (150)
.
T Consensus 113 ~ 113 (352)
T 2ism_A 113 L 113 (352)
T ss_dssp C
T ss_pred C
Confidence 4
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.59 E-value=0.0055 Score=39.86 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=63.3
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCC--CeEEEEEccccccccccccc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS--GTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~i~~~~~~~~~~~~~~~ 78 (150)
++|+++++++++-..++.|..||.... ...... .......+++.++|+.+++.... ..+..++.. .++.. .+..
T Consensus 37 ia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~~~-~~~~ 112 (306)
T 2p4o_A 37 LASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGTVE-TLLT 112 (306)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT-TSCEE-EEEE
T ss_pred EEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCeEE-EEEe
Confidence 468888887777668899999998754 333222 23578899999999866554332 246666643 22322 1111
Q ss_pred -ccccceeEee-ecCCCEEEEecCCCcEEEEeccCC
Q 031924 79 -LSPNSVDALL-KLDEDRVITGSENGLISLVGILPN 112 (150)
Q Consensus 79 -~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~ 112 (150)
.......... .+.+..+++-..++.|+.+|...+
T Consensus 113 ~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 113 LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 0111112222 334444555556889999998654
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.58 E-value=0.0059 Score=40.03 Aligned_cols=133 Identities=9% Similarity=-0.022 Sum_probs=72.2
Q ss_pred CeeecCcceEEEE-cCCCeEEEEEcCC----CeeeeeeccCCCcEEEEEEEeCCCEE-EeecCCCeEEEEEccccccccc
Q 031924 1 MTFAADAMKLLGT-SGDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSD 74 (150)
Q Consensus 1 i~~~~~~~~l~~~-~~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~~~~~~ 74 (150)
++|++++..|+.+ ...+.|..+++.. ......+.........+++.+.+..| ++-..++.|.++++. +....
T Consensus 35 ~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~--g~~~~ 112 (316)
T 1ijq_A 35 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRK 112 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SSSEE
T ss_pred EEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC--CCceE
Confidence 3677765555544 4678999999875 22222222223455788998755544 555667899999975 22222
Q ss_pred cc-ccccccceeEee-ecCCC-EEEEecCC-CcEEEEeccCCeeeeec-cCCCCcceeEEEEcCCccEE
Q 031924 75 RF-VGLSPNSVDALL-KLDED-RVITGSEN-GLISLVGILPNRIIQPI-AEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 75 ~~-~~~~~~~v~~~~-~~~~~-~l~~~~~d-g~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l 138 (150)
.+ .. .......+. .+.+. ++.+.... +.|...++.. .....+ ...-. ....+++++++..|
T Consensus 113 ~~~~~-~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~-~P~gla~d~~~~~l 178 (316)
T 1ijq_A 113 TLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQ-WPNGITLDLLSGRL 178 (316)
T ss_dssp EEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCS-CEEEEEEETTTTEE
T ss_pred EEEEC-CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCC-CceEEEEeccCCEE
Confidence 22 21 223344555 66444 44444333 6888888753 322222 12223 37789999865443
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.55 E-value=0.0062 Score=39.61 Aligned_cols=128 Identities=9% Similarity=-0.007 Sum_probs=72.7
Q ss_pred cceEEEEcCCCeEEEEEcCCCee-eeee---------ccCCCcEEEEEEEeCCCEEEee-cCCCeEEEEEccccccc--c
Q 031924 7 AMKLLGTSGDGTLSVCNLRKNTV-QTRS---------EFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDC--S 73 (150)
Q Consensus 7 ~~~l~~~~~d~~i~i~d~~~~~~-~~~~---------~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~~~~--~ 73 (150)
+..+++-..++.|..+|...++. +... .......+.+ +++++.|+.+ ...+.|..|++...+.. .
T Consensus 128 ~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 128 TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEP 205 (306)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred CcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCcc
Confidence 33444444688899999876431 1100 0111244555 8888766544 56789999998532221 1
Q ss_pred cccccccccceeEee-ecCCCEEEEecCCCcEEEEeccCCee--eeeccCCCCcceeEEEEc---CCccEEEe
Q 031924 74 DRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRI--IQPIAEHSEYPIESLGIA---SVLCFINS 140 (150)
Q Consensus 74 ~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~---~~~~~l~s 140 (150)
..+.. ......++ .++|+++++....+.|.+++.. ++. +..+..... ...+++|. |++..|..
T Consensus 206 ~~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~-~p~~~a~~g~~~d~~~LyV 274 (306)
T 2p4o_A 206 EIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVI-GSTAVAFGQTEGDCTAIYV 274 (306)
T ss_dssp EEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCT-TEEEEEECCSTTTTTEEEE
T ss_pred EEEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccC-CceEEEEecccCCCCEEEE
Confidence 11111 11122333 6788887777778899999975 544 223332223 38899998 88654443
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.53 E-value=0.0091 Score=41.05 Aligned_cols=145 Identities=8% Similarity=-0.005 Sum_probs=82.0
Q ss_pred Ceeec-CcceEEEEcCCCeEEEEEcCCCeeeeeec--cCCCcEEEEEEEeCCCEEE-eecCCCeEEEEEcccc-ccc--c
Q 031924 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYF-KDC--S 73 (150)
Q Consensus 1 i~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~~~~~~-~~~--~ 73 (150)
++++| ++.+.++-..++.|+.+|..++.....+. .....-..++++|++++|+ +-...+.|+.++.... +.. .
T Consensus 233 iavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~ 312 (433)
T 4hw6_A 233 CAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVP 312 (433)
T ss_dssp CEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCC
T ss_pred EEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcE
Confidence 46778 56555555678899999988775522221 1122335799999998655 4456688999886421 111 0
Q ss_pred ccccccc---------------ccceeEee----------ecCCCEEEEecCCCcEEEEeccCCeeeeeccCC-------
Q 031924 74 DRFVGLS---------------PNSVDALL----------KLDEDRVITGSENGLISLVGILPNRIIQPIAEH------- 121 (150)
Q Consensus 74 ~~~~~~~---------------~~~v~~~~----------~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------- 121 (150)
..+.+ . -.....++ ..+++++++-..++.|+.++. ++.........
T Consensus 313 ~~~ag-~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~ 390 (433)
T 4hw6_A 313 YIVCG-QHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGY 390 (433)
T ss_dssp EEEEE-CTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCC
T ss_pred EEEEe-cCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCcccc
Confidence 11111 1 00112222 234566666667788998885 44433222110
Q ss_pred ----------CCcceeEEEEc-CCccEEEecccccccc
Q 031924 122 ----------SEYPIESLGIA-SVLCFINSGFLSLNVN 148 (150)
Q Consensus 122 ----------~~~~i~~~~~~-~~~~~l~s~~~~~~v~ 148 (150)
-. ....++++ ++|.++++=..+..|.
T Consensus 391 ~dG~~~~~~~~~-~P~giavd~~~g~lyVaD~~n~rIr 427 (433)
T 4hw6_A 391 VDGELRSQALFN-HPTSIAYDMKRKCFYIGDCDNHRVR 427 (433)
T ss_dssp BCEETTTTCBCS-SEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred CCCccccccEeC-CCcEEEEECCCCEEEEEeCCCCEEE
Confidence 01 26789999 7888777655554443
No 273
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.51 E-value=0.0088 Score=42.62 Aligned_cols=55 Identities=9% Similarity=0.023 Sum_probs=35.6
Q ss_pred eEEEEEcCCCeeeeeeccC--C-------CcEEEEEEEeCCC---EEEeecCCCeEEEEEcccccccc
Q 031924 18 TLSVCNLRKNTVQTRSEFS--E-------EELTSVVLMKNGR---KVVCGSQSGTVLLYSWGYFKDCS 73 (150)
Q Consensus 18 ~i~i~d~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~---~l~~~~~d~~i~i~~~~~~~~~~ 73 (150)
.|..+|.++++.+...+.. . ....-+....+|+ .++.++.+|.+.++|.. .++.+
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~-tG~~~ 339 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRE-NGNLI 339 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETT-TCCEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECC-CCCEE
Confidence 6999999999887665422 1 1111223335674 56788899999999975 34443
No 274
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.47 E-value=0.0097 Score=39.79 Aligned_cols=131 Identities=13% Similarity=0.156 Sum_probs=77.1
Q ss_pred CcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeC----CCE---EEeec-C--CCeEEEEEcccccccccc
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKN----GRK---VVCGS-Q--SGTVLLYSWGYFKDCSDR 75 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~----~~~---l~~~~-~--d~~i~i~~~~~~~~~~~~ 75 (150)
...+++.....+-+.+||+ +++.+..+.. +.++.+..-|+ |+. +++.. . +++|.+|++......+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 4456666678889999999 7878777653 56777766663 332 23333 3 579999977311122222
Q ss_pred cccc------ccccee--Eee-ec-CCC-EEEEecCCCcEEEEecc-------CCeeeeeccCCCCcceeEEEEcCCccE
Q 031924 76 FVGL------SPNSVD--ALL-KL-DED-RVITGSENGLISLVGIL-------PNRIIQPIAEHSEYPIESLGIASVLCF 137 (150)
Q Consensus 76 ~~~~------~~~~v~--~~~-~~-~~~-~l~~~~~dg~i~~~d~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~ 137 (150)
+... ....+. |+. ++ .+. +++....+|.+..|++. +.+.++.+... . .+..+..++....
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-s-q~EgcvvDd~~g~ 193 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-S-QTEGMAADDEYGR 193 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-S-CEEEEEEETTTTE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-C-CcceEEEcCCCCe
Confidence 2110 102222 332 44 343 67778888999999883 23456666443 3 3777777776555
Q ss_pred EEec
Q 031924 138 INSG 141 (150)
Q Consensus 138 l~s~ 141 (150)
|..+
T Consensus 194 Lyv~ 197 (355)
T 3amr_A 194 LYIA 197 (355)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5443
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.46 E-value=0.01 Score=40.06 Aligned_cols=136 Identities=9% Similarity=-0.062 Sum_probs=72.9
Q ss_pred eeecCcc-eEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec-CC-CeEEEEEccccccccccccc
Q 031924 2 TFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS-QS-GTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 2 ~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~i~~~~~~~~~~~~~~~ 78 (150)
++++.+. +.++-...+.|.+.++........+.........+++.|.+..|+... .+ +.|..+++. +.....+..
T Consensus 165 avd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~ 242 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRRIIAD 242 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEEC
T ss_pred EEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC--CCCcEEEEE
Confidence 4565444 444445667888888765433333333445678999998766665444 34 678888874 333222221
Q ss_pred ccccceeEee-ec-CCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEec
Q 031924 79 LSPNSVDALL-KL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 79 ~~~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
..-.....++ .+ .++++++-+..+.|..+++........+..... ....+++. ++.++.+-
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~-~P~giav~-~~~ly~td 305 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLP-HPFAITVF-EDSLYWTD 305 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCS-SEEEEEEE-TTEEEEEE
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCC-CceEEEEE-CCEEEEee
Confidence 0222344555 65 444555556678899998864322222222222 25566663 34444443
No 276
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.41 E-value=0.013 Score=39.87 Aligned_cols=135 Identities=10% Similarity=-0.023 Sum_probs=73.2
Q ss_pred CeeecCcceEEEE-cCCCeEEEEEcCCC----eeeeeeccCCCcEEEEEEEeC-CCEEEeecCCCeEEEEEccccccccc
Q 031924 1 MTFAADAMKLLGT-SGDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWGYFKDCSD 74 (150)
Q Consensus 1 i~~~~~~~~l~~~-~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~ 74 (150)
|+|++.+..|+.+ ...+.|+.+++... .....+.........+++.+. ++..++-...+.|.+.++. +....
T Consensus 117 l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~--g~~~~ 194 (400)
T 3p5b_L 117 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRK 194 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT--TCSEE
T ss_pred EeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC--CCceE
Confidence 4677755555544 45678888887652 122223334456788999975 4444555667889998875 22222
Q ss_pred c-cccccccceeEee-ecCCCEE-EEecC-CCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEE
Q 031924 75 R-FVGLSPNSVDALL-KLDEDRV-ITGSE-NGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFIN 139 (150)
Q Consensus 75 ~-~~~~~~~~v~~~~-~~~~~~l-~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (150)
. +.. .......+. .+.+..| .+-.. .+.|...++........+...-. ....+++++++..|.
T Consensus 195 ~l~~~-~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~-~P~glavd~~~~~lY 261 (400)
T 3p5b_L 195 TLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ-WPNGITLDLLSGRLY 261 (400)
T ss_dssp EEEEC-SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCS-CEEEEEEETTTTEEE
T ss_pred EEEeC-CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCC-ceEEEEEEeCCCEEE
Confidence 2 222 223345555 6644444 44333 46888888854332222222223 377889997655443
No 277
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.39 E-value=0.012 Score=39.26 Aligned_cols=65 Identities=12% Similarity=0.076 Sum_probs=40.1
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCe-eeeeec---cCCCcEEEEEEEeC---CCEEEeecC----C----CeEEEEE
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-VQTRSE---FSEEELTSVVLMKN---GRKVVCGSQ----S----GTVLLYS 65 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----~~i~i~~ 65 (150)
|+|.|+++++++ ..++.|.+++ ..++ .+..+. ........++++|+ +..|++... + ..|..|+
T Consensus 34 ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 34 IAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp EEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred EEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEE
Confidence 578899985555 4669999997 4454 222211 12356899999997 555544432 2 5666676
Q ss_pred cc
Q 031924 66 WG 67 (150)
Q Consensus 66 ~~ 67 (150)
..
T Consensus 112 ~~ 113 (354)
T 3a9g_A 112 LD 113 (354)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.30 E-value=0.013 Score=37.43 Aligned_cols=134 Identities=7% Similarity=0.059 Sum_probs=80.8
Q ss_pred CeeecCcceEE-EEcCCCeEEEEEcCCCeeeeeecc-CCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccc--ccccc
Q 031924 1 MTFAADAMKLL-GTSGDGTLSVCNLRKNTVQTRSEF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD--CSDRF 76 (150)
Q Consensus 1 i~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~--~~~~~ 76 (150)
++|+|+++.|+ +...++.|..+|.. ++.+..+.. -......+++.+++.++++.-.++.+.++++...+. .....
T Consensus 32 la~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~ 110 (255)
T 3qqz_A 32 LTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKI 110 (255)
T ss_dssp EEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred eEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeee
Confidence 47888766555 56688999999998 777766532 235678999998888777766778899988754332 11111
Q ss_pred c-----cccccceeEee-ecCCCEEEEecCCCcEEEEecc---CCeeeeec-------cCCCCcceeEEEEcCCcc
Q 031924 77 V-----GLSPNSVDALL-KLDEDRVITGSENGLISLVGIL---PNRIIQPI-------AEHSEYPIESLGIASVLC 136 (150)
Q Consensus 77 ~-----~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~---~~~~~~~~-------~~~~~~~i~~~~~~~~~~ 136 (150)
. .........++ .+.++.|.++.+.....+|... ....+..+ ..+.. .+..++++|...
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~-d~S~l~~dp~tg 185 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD-DVSGAEFNQQKN 185 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS-CCCEEEEETTTT
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccC-CceeEEEcCCCC
Confidence 1 10233346677 7777666666665555555543 11111111 01112 377888888543
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.29 E-value=0.017 Score=38.52 Aligned_cols=135 Identities=9% Similarity=-0.072 Sum_probs=73.0
Q ss_pred eeecCcc-eEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEE-eecCC-CeEEEEEccccccccccccc
Q 031924 2 TFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQS-GTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 2 ~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d-~~i~i~~~~~~~~~~~~~~~ 78 (150)
++++.+. +.++-...+.|.+.++..................+++.|.+..++ +-..+ +.|..+++. +.....+..
T Consensus 122 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~ 199 (349)
T 3v64_C 122 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRRIIAD 199 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEESCC
T ss_pred EEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC--CCCcEEEEE
Confidence 5565444 444555677888888875433333333345678999998665554 44444 788888875 332222211
Q ss_pred ccccceeEee-ecCC-CEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEe
Q 031924 79 LSPNSVDALL-KLDE-DRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 140 (150)
..-.....++ .+++ ++.++-...+.|..+++........+..... ....+++. ++.++.+
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~-~P~giav~-~~~ly~t 261 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLP-HPFAITVF-EDSLYWT 261 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-SEEEEEEE-TTEEEEE
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCC-CceEEEEE-CCEEEEe
Confidence 0223344555 6544 4555555677899999864322222222222 25566663 3444443
No 280
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.24 E-value=0.0076 Score=37.70 Aligned_cols=133 Identities=8% Similarity=-0.105 Sum_probs=71.1
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeee------eeec--cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccc-
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ------TRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD- 71 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~- 71 (150)
++|+|++.+.++ .+|.+.-.+..+.... ..+- +.. ...++.|.|+|.+.++ .||.|+-++..+.+.
T Consensus 46 laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~ 120 (236)
T 1tl2_A 46 LFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD 120 (236)
T ss_dssp EEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC
T ss_pred EEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC
Confidence 578998886666 6677777776542211 1110 111 2478899999987777 569888777532211
Q ss_pred -cccc--cccc-cccceeEee-ecCCCEEEEecCCCcEEEEeccCCe------eeeeccCCCC-cceeEEEEcCCccEEE
Q 031924 72 -CSDR--FVGL-SPNSVDALL-KLDEDRVITGSENGLISLVGILPNR------IIQPIAEHSE-YPIESLGIASVLCFIN 139 (150)
Q Consensus 72 -~~~~--~~~~-~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~------~~~~~~~~~~-~~i~~~~~~~~~~~l~ 139 (150)
.+.. ..+. .-..+..+. .|+|.+.+.. |+.++-.....+. ....+ .+.+ ..-+.+.|.++|.+.+
T Consensus 121 ~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~-g~~g~~~yr~l~f~~~G~l~~ 197 (236)
T 1tl2_A 121 NWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKI-GQGGWDTFKFLFFSSVGTLFG 197 (236)
T ss_dssp CHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEE-ESSSGGGEEEEEECTTSCEEE
T ss_pred ceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCccccccccee-ccCCcceEEEEEECCCCcEEE
Confidence 1111 1110 013456666 7788777766 7775433222111 01111 1111 1244567899998776
Q ss_pred ec
Q 031924 140 SG 141 (150)
Q Consensus 140 s~ 141 (150)
..
T Consensus 198 v~ 199 (236)
T 1tl2_A 198 VQ 199 (236)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.21 E-value=0.015 Score=41.59 Aligned_cols=55 Identities=9% Similarity=0.052 Sum_probs=36.5
Q ss_pred CeEEEEEcCCCeeeeeecc--CC--------CcEEEEEEE-eCCC---EEEeecCCCeEEEEEcccccccc
Q 031924 17 GTLSVCNLRKNTVQTRSEF--SE--------EELTSVVLM-KNGR---KVVCGSQSGTVLLYSWGYFKDCS 73 (150)
Q Consensus 17 ~~i~i~d~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~i~~~~~~~~~~ 73 (150)
+.|..+|.++++.+...+. |. .++. +... .+|+ .++.++.+|.++++|.+ .++.+
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~-tG~~l 359 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRS-NGKLQ 359 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETT-TCCEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECC-CCCEe
Confidence 6899999999998876543 21 1221 1221 3564 67889999999999974 34443
No 282
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.19 E-value=0.022 Score=38.08 Aligned_cols=67 Identities=9% Similarity=0.125 Sum_probs=41.9
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeee--eee----ccCCCcEEEEEEEeC---CCEEEee---cCCCeEEEEEcc
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ--TRS----EFSEEELTSVVLMKN---GRKVVCG---SQSGTVLLYSWG 67 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~----~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~i~~~~ 67 (150)
|+|.|+++++++--..|.|++++...++.. ..+ .........++++|+ +..|... ..++.|.-|...
T Consensus 37 ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~ 115 (347)
T 3das_A 37 LAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYD 115 (347)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBC
T ss_pred EEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeC
Confidence 578899987777755899999987655432 211 122456899999985 3444432 234455555543
No 283
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.16 E-value=0.029 Score=38.85 Aligned_cols=55 Identities=11% Similarity=0.149 Sum_probs=35.5
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeee--eeecc------CCCcEEEEEEEeC---CCEEEee
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ--TRSEF------SEEELTSVVLMKN---GRKVVCG 55 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~------~~~~v~~~~~~~~---~~~l~~~ 55 (150)
|+|.|+++++++-...+.|.+++...++.. ..+.. ....+..++|+|+ +..|...
T Consensus 32 ~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 32 LLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 578899987777655557888886655432 22221 2456789999995 5555444
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.15 E-value=0.0023 Score=46.68 Aligned_cols=133 Identities=9% Similarity=-0.040 Sum_probs=67.0
Q ss_pred CeeecCcceEEEEc-CCCeEEEEEcCC----CeeeeeeccCCCcEEEEEEEeC-CCEEEeecCCCeEEEEEccccccccc
Q 031924 1 MTFAADAMKLLGTS-GDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWGYFKDCSD 74 (150)
Q Consensus 1 i~~~~~~~~l~~~~-~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~ 74 (150)
|+|++.+..|+.+. ..+.|+.+++.. ......+.........+++.+. ++.+++-...+.|.++++. +....
T Consensus 411 la~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d--g~~~~ 488 (699)
T 1n7d_A 411 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRK 488 (699)
T ss_dssp CEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS--SCCEE
T ss_pred EccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC--CCceE
Confidence 46777666666554 567888888875 2222222222223456788754 4444555567889998875 22222
Q ss_pred ccccccccceeEee-ecC-CCEEEEecCC-CcEEEEeccCCeeeeeccCCCCcceeEEEEcCCcc
Q 031924 75 RFVGLSPNSVDALL-KLD-EDRVITGSEN-GLISLVGILPNRIIQPIAEHSEYPIESLGIASVLC 136 (150)
Q Consensus 75 ~~~~~~~~~v~~~~-~~~-~~~l~~~~~d-g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (150)
.+..........++ .+. +.++++-... +.|..+++........+...-. ....|+|+|++.
T Consensus 489 ~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~-~PnGlavd~~~~ 552 (699)
T 1n7d_A 489 TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ-WPNGITLDLLSG 552 (699)
T ss_dssp EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS-SCCCEEECTTTC
T ss_pred EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC-CccEEEEeccCC
Confidence 22110112223344 554 4444443333 6788777743222111111112 256788988644
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.10 E-value=0.021 Score=37.92 Aligned_cols=106 Identities=8% Similarity=0.007 Sum_probs=70.6
Q ss_pred ecCcceEEEEc-------------CCCeEEEEEcC---CCeeeeeec--c-----------CCCcEEEEEEEeCCCEEEe
Q 031924 4 AADAMKLLGTS-------------GDGTLSVCNLR---KNTVQTRSE--F-----------SEEELTSVVLMKNGRKVVC 54 (150)
Q Consensus 4 ~~~~~~l~~~~-------------~d~~i~i~d~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~l~~ 54 (150)
.|+++++++.. .+..|..||+. +++.+.... . .......++..++|+..++
T Consensus 74 D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 74 DNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp SSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred CCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 57777777543 36789999999 776554332 1 1124789999999999898
Q ss_pred ecCC-CeEEEEEcccccccccccc-c----ccccceeEee-ecCCCEEEEecCCCcEEEEeccC
Q 031924 55 GSQS-GTVLLYSWGYFKDCSDRFV-G----LSPNSVDALL-KLDEDRVITGSENGLISLVGILP 111 (150)
Q Consensus 55 ~~~d-~~i~i~~~~~~~~~~~~~~-~----~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~ 111 (150)
++.. +.|..++.. ++....+. . ......+.+. .|+++.|++....|.+..+|+..
T Consensus 154 ~s~~~~~I~rV~pd--G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 154 FALGMPAIARVSAD--GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEESSCEEEEECTT--SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCCCeEEEEeCC--CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 8887 887777754 33222211 0 0112244566 78998888877799999999874
No 286
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.99 E-value=0.023 Score=37.91 Aligned_cols=54 Identities=20% Similarity=0.260 Sum_probs=33.0
Q ss_pred CeeecCcceEEEEcCCCeEEEEEcCCCeeee---ee----ccCCCcEEEEEEEeC---CCEEEee
Q 031924 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT---RS----EFSEEELTSVVLMKN---GRKVVCG 55 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~---~~----~~~~~~v~~~~~~~~---~~~l~~~ 55 (150)
|+|.|+++.++++...|.|++++.. ++... .+ .........++++|+ +..|...
T Consensus 23 i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 23 LAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp EEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred EEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 5789999834445567899999853 33211 11 112346789999996 4445443
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.98 E-value=0.066 Score=39.83 Aligned_cols=133 Identities=9% Similarity=-0.040 Sum_probs=70.4
Q ss_pred eeecCcceEE-EEcCCCeEEEEEcCCC----eeeeeeccCCCcEEEEEEEeCCCEEE-eecCCCeEEEEEcccccccccc
Q 031924 2 TFAADAMKLL-GTSGDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDR 75 (150)
Q Consensus 2 ~~~~~~~~l~-~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~ 75 (150)
+|++.+..|+ +-...+.|+.+++... .....+.........+++.+.++.|+ +-...+.|.+.++. +.....
T Consensus 430 ~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld--G~~~~~ 507 (791)
T 3m0c_C 430 DTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRKT 507 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SSSEEE
T ss_pred eecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC--CCeEEE
Confidence 4565444444 4445667777777642 12222232344567899988765554 55567899999985 333333
Q ss_pred cccccccceeEee-ecC-CCEEEEecCC-CcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccE
Q 031924 76 FVGLSPNSVDALL-KLD-EDRVITGSEN-GLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCF 137 (150)
Q Consensus 76 ~~~~~~~~v~~~~-~~~-~~~l~~~~~d-g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 137 (150)
+..........++ .+. +.++.+-..+ +.|...++........+...-. ....|++++.+..
T Consensus 508 l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~-~P~GLavD~~~~~ 571 (791)
T 3m0c_C 508 LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ-WPNGITLDLLSGR 571 (791)
T ss_dssp EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS-CEEEEEEETTTTE
T ss_pred EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCC-CceEEEEecCCCe
Confidence 3210223345565 665 4444444333 6788888854333222222223 3778888865443
No 288
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.97 E-value=0.023 Score=39.07 Aligned_cols=66 Identities=9% Similarity=0.026 Sum_probs=49.4
Q ss_pred eeecCcceEEEEcCCCeEEEEEcCCCee------------e--eeecc----CCCcEEEEEEEeC---CCEEEeecCCCe
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNLRKNTV------------Q--TRSEF----SEEELTSVVLMKN---GRKVVCGSQSGT 60 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~------------~--~~~~~----~~~~v~~~~~~~~---~~~l~~~~~d~~ 60 (150)
..+|+|++|+.. ++..|.|..+..+.. . ..+.. ...+|..+.|+|- +..|++-..|+.
T Consensus 72 vlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~ 150 (452)
T 3pbp_A 72 ISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT 150 (452)
T ss_dssp EECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC
T ss_pred EECCCCCEEEEe-cCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE
Confidence 468999999998 556999999884320 0 11111 2467999999995 668999999999
Q ss_pred EEEEEccc
Q 031924 61 VLLYSWGY 68 (150)
Q Consensus 61 i~i~~~~~ 68 (150)
|++||+..
T Consensus 151 Ir~yDl~~ 158 (452)
T 3pbp_A 151 ITMFDILN 158 (452)
T ss_dssp EEEEETTC
T ss_pred EEEEEccc
Confidence 99999964
No 289
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.94 E-value=0.016 Score=41.65 Aligned_cols=111 Identities=12% Similarity=0.077 Sum_probs=68.1
Q ss_pred cceEEEEcC-CCeEEEEEc-CCCeeeeeeccCCCc-----------EEEEEEEeCCCE----EEeecCCCeEEEEEcccc
Q 031924 7 AMKLLGTSG-DGTLSVCNL-RKNTVQTRSEFSEEE-----------LTSVVLMKNGRK----VVCGSQSGTVLLYSWGYF 69 (150)
Q Consensus 7 ~~~l~~~~~-d~~i~i~d~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~~~~d~~i~i~~~~~~ 69 (150)
+..++.++. ++.|.-+|. ++++.+.+....... ...+++.|.+.. ++.++.|+.+..+|.. .
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~-T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE-T 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT-T
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC-C
Confidence 446667767 889999999 899888665533211 123455444444 8888899999999975 3
Q ss_pred cccccccccccc----cceeEeeecCCCEEEEec------CCCcEEEEeccCCeeeeecc
Q 031924 70 KDCSDRFVGLSP----NSVDALLKLDEDRVITGS------ENGLISLVGILPNRIIQPIA 119 (150)
Q Consensus 70 ~~~~~~~~~~~~----~~v~~~~~~~~~~l~~~~------~dg~i~~~d~~~~~~~~~~~ 119 (150)
++..-+... .. ..+.+.-...+..++.++ .++.|+.+|..+++.+..+.
T Consensus 141 G~~~W~~~~-~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 141 GETVWKVEN-SDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp CCEEEEEEC-CCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEeecC-CCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 454433321 11 011110001134555555 37999999999998776653
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.94 E-value=0.053 Score=38.06 Aligned_cols=143 Identities=12% Similarity=0.028 Sum_probs=79.5
Q ss_pred eeecCc-ceEEEEcCCCeEEEEEcC-------CCee-----------eeee--ccCCCcEEEEEEEeCCCEEE-eecCCC
Q 031924 2 TFAADA-MKLLGTSGDGTLSVCNLR-------KNTV-----------QTRS--EFSEEELTSVVLMKNGRKVV-CGSQSG 59 (150)
Q Consensus 2 ~~~~~~-~~l~~~~~d~~i~i~d~~-------~~~~-----------~~~~--~~~~~~v~~~~~~~~~~~l~-~~~~d~ 59 (150)
+++|++ .++++-..++.|..+|+. ++.. ...+ .........++|+|+|+.|+ +-+..+
T Consensus 253 avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h 332 (496)
T 3kya_A 253 TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNH 332 (496)
T ss_dssp EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred EEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCC
Confidence 567744 445555678889999987 4433 1111 12233457999999999654 445678
Q ss_pred eEEEEEcccccccc---ccccccc---c------------ccee-Eee-e-------cCCCEEEEecCCCcEEEEeccCC
Q 031924 60 TVLLYSWGYFKDCS---DRFVGLS---P------------NSVD-ALL-K-------LDEDRVITGSENGLISLVGILPN 112 (150)
Q Consensus 60 ~i~i~~~~~~~~~~---~~~~~~~---~------------~~v~-~~~-~-------~~~~~l~~~~~dg~i~~~d~~~~ 112 (150)
.|+.++.......+ ..+.+ . . .... .++ . .++.++++=..++.|+.++. ++
T Consensus 333 ~I~kid~dg~~~~~~~~~~~aG-~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G 410 (496)
T 3kya_A 333 YFMRSDYDEIKKEFITPYNFVG-GYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG 410 (496)
T ss_dssp EEEEEEEETTTTEECCCEEEEE-BTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC
T ss_pred EEEEEecCCCcceecccEEecC-CCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC
Confidence 88887653211111 11211 1 0 1112 222 2 45667777777889999984 44
Q ss_pred eeeeeccCC---------------CC--------cceeEEEEcCC-ccEEEeccccccc
Q 031924 113 RIIQPIAEH---------------SE--------YPIESLGIASV-LCFINSGFLSLNV 147 (150)
Q Consensus 113 ~~~~~~~~~---------------~~--------~~i~~~~~~~~-~~~l~s~~~~~~v 147 (150)
.. .++... .+ .....|+++++ |.++++=.....|
T Consensus 411 ~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rI 468 (496)
T 3kya_A 411 IV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTI 468 (496)
T ss_dssp BE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEE
T ss_pred CE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEE
Confidence 32 222110 00 12668999996 7777665444443
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.93 E-value=0.0049 Score=45.00 Aligned_cols=116 Identities=9% Similarity=-0.050 Sum_probs=63.7
Q ss_pred eeecCcceEEEEc-CC-CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEE-EeecCCCeEEEEEccccccccccccc
Q 031924 2 TFAADAMKLLGTS-GD-GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 2 ~~~~~~~~l~~~~-~d-~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
+++|.+..|+.+. .. +.|..+++........+.......+.++++|++..| ++-...+.|..+++.. .....+..
T Consensus 502 avDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG--~~~~~~~~ 579 (699)
T 1n7d_A 502 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG--GNRKTILE 579 (699)
T ss_dssp ECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS--SCCEEECC
T ss_pred EEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC--CceEEEEe
Confidence 5566555555543 22 577777765432222222223456789999875555 4555667899998752 22222211
Q ss_pred c--cccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeecc
Q 031924 79 L--SPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIA 119 (150)
Q Consensus 79 ~--~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 119 (150)
. .......+..-.+.++++....+.|..++..+++.+..+.
T Consensus 580 ~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 580 DEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp CSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred cCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 0 1111122221233566666677899999988877766664
No 292
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.93 E-value=0.045 Score=37.17 Aligned_cols=117 Identities=9% Similarity=-0.045 Sum_probs=69.6
Q ss_pred CeeecCcceEEEEc-C-CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEee-cCCCeEEEEEcccccccccccc
Q 031924 1 MTFAADAMKLLGTS-G-DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCSDRFV 77 (150)
Q Consensus 1 i~~~~~~~~l~~~~-~-d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~ 77 (150)
|+++|.+..|+.+. . .+.|...++............-.....+++++++..|+.+ ...+.|..+|+. +.....+.
T Consensus 207 iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d--G~~~~~~~ 284 (400)
T 3p5b_L 207 IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GGNRKTIL 284 (400)
T ss_dssp EEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCCCEEEE
T ss_pred EEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC--CCccEEEE
Confidence 35677655555554 2 3678888876543333333334567999999887777655 456789999975 22222221
Q ss_pred cc--cccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeecc
Q 031924 78 GL--SPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIA 119 (150)
Q Consensus 78 ~~--~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 119 (150)
.. .......+....+.++.+-...+.|..+|..+++.+..+.
T Consensus 285 ~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 285 EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp ECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred eCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 10 1122234443445666777777899999977776555543
No 293
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.91 E-value=0.075 Score=39.29 Aligned_cols=131 Identities=16% Similarity=0.114 Sum_probs=79.2
Q ss_pred cCcceEEEEcCCCeEEEEEcCCCeeeeeecc--------CCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccc
Q 031924 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF--------SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (150)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 76 (150)
++++ |-.|+.++-|..|+..+++....... ....|.++...++|+.|..|+.++-+..||... ++ ...+
T Consensus 366 ~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~-~~-~~~~ 442 (795)
T 4a2l_A 366 KDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS-GQ-VENF 442 (795)
T ss_dssp TTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT-CC-EEEE
T ss_pred CCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC-Cc-EEEe
Confidence 3444 44555666788999887654332211 235688998888888577777777788998742 22 2222
Q ss_pred cc----ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccC------CCCcceeEEEEcCCccEEEec
Q 031924 77 VG----LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAE------HSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 77 ~~----~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~s~ 141 (150)
.. .....|.++. ..++++.+.. .+ -+..||..+++....... ... .|.++..+++|++.+..
T Consensus 443 ~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 443 NQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSK-QITTLFRDSHKRLWIGG 515 (795)
T ss_dssp CTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEEECCBCTTCCBCCCC-CEEEEEECTTCCEEEEE
T ss_pred ecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEEEccccccccccCCc-eEEEEEECCCCCEEEEe
Confidence 10 0235677776 5566655544 44 578899877654332211 113 48899999988865543
No 294
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.84 E-value=0.046 Score=35.96 Aligned_cols=115 Identities=9% Similarity=-0.070 Sum_probs=67.1
Q ss_pred CeeecCcceEEEEc--CCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEee-cCCCeEEEEEccccccccccc-
Q 031924 1 MTFAADAMKLLGTS--GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCSDRF- 76 (150)
Q Consensus 1 i~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~- 76 (150)
|+++|.+..|+.+. ..+.|..+++............-...+.+++++++..|+.+ ...+.|..+++.. .....+
T Consensus 127 iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG--~~~~~~~ 204 (318)
T 3sov_A 127 IALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG--TNRQAVV 204 (318)
T ss_dssp EEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEE
T ss_pred EEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC--CceEEEe
Confidence 35677656666554 25788888876433222222334467899999976666554 4568899999852 222222
Q ss_pred ccccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeec
Q 031924 77 VGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPI 118 (150)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 118 (150)
.+ .......+....+.++.+-...+.|..++..+++....+
T Consensus 205 ~~-~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 205 KG-SLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp CS-CCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred cC-CCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 11 122223444224556666667788999988666544433
No 295
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.84 E-value=0.045 Score=35.84 Aligned_cols=116 Identities=9% Similarity=-0.050 Sum_probs=67.3
Q ss_pred CeeecCcceEEEEc-CC-CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEee-cCCCeEEEEEcccccccccccc
Q 031924 1 MTFAADAMKLLGTS-GD-GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCSDRFV 77 (150)
Q Consensus 1 i~~~~~~~~l~~~~-~d-~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~ 77 (150)
++++|.+..|+.+. .. +.|..+++............-.....+++++++..|+.+ ...+.|..+|+. +...+.+.
T Consensus 125 iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d--g~~~~~~~ 202 (316)
T 1ijq_A 125 IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GGNRKTIL 202 (316)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEE
T ss_pred EEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC--CCceEEEe
Confidence 35677655555544 33 688888876432222222334567899999887666554 456799999985 22222221
Q ss_pred cc--cccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeec
Q 031924 78 GL--SPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPI 118 (150)
Q Consensus 78 ~~--~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 118 (150)
.. .......+.-..+.++.+-...+.|..++..+++.+..+
T Consensus 203 ~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 203 EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp ECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred ecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 10 112223444234666777777889999987666544444
No 296
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.0034 Score=41.78 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=69.1
Q ss_pred ceEEEEcCCCeEEEEEcCCCeeeeeeccC-CCcEEEEEEE--e-CCCEEEee-cCCCeEEEEEcccccccccccccc---
Q 031924 8 MKLLGTSGDGTLSVCNLRKNTVQTRSEFS-EEELTSVVLM--K-NGRKVVCG-SQSGTVLLYSWGYFKDCSDRFVGL--- 79 (150)
Q Consensus 8 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~--- 79 (150)
..++.++.||.|.-+|.++|+...+++.. ..++....-. + ++..++.. +.||.+..++.. .+.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~-~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAH-QGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETT-TEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECC-CCcEEeeeccccce
Confidence 47788889999999999999988877654 1222221100 1 22333333 689999999974 33322222110
Q ss_pred cccceeEee--e-------cCCCEEEEecCCCcEEEEeccCCeeeeeccC
Q 031924 80 SPNSVDALL--K-------LDEDRVITGSENGLISLVGILPNRIIQPIAE 120 (150)
Q Consensus 80 ~~~~v~~~~--~-------~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 120 (150)
...++..-. - ..+..+++|+.+|.+...|+.+|+.+..+..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 111121100 0 1467889999999999999999998887753
No 297
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.83 E-value=0.06 Score=37.09 Aligned_cols=138 Identities=11% Similarity=0.111 Sum_probs=78.9
Q ss_pred CcceEEEEcCCCeEEEEEcCCCeeeeeeccC----CCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc-cc--------
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFS----EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK-DC-------- 72 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~-~~-------- 72 (150)
++..++.+ .++.||.-++..+..-+.+... -+.+..+..+|+|++|+..+. ..|.+..+.... ..
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccc
Confidence 44445555 4467777777643322222222 235778999999999988754 478887774111 00
Q ss_pred c--ccccc-----ccccceeEee-ec---CCCEEEEecCCCcEEEEeccCC--eeeeecc---------CCCCcceeEEE
Q 031924 73 S--DRFVG-----LSPNSVDALL-KL---DEDRVITGSENGLISLVGILPN--RIIQPIA---------EHSEYPIESLG 130 (150)
Q Consensus 73 ~--~~~~~-----~~~~~v~~~~-~~---~~~~l~~~~~dg~i~~~d~~~~--~~~~~~~---------~~~~~~i~~~~ 130 (150)
. +.+.- ....+|..+. +| .+..|++-..|+.||+||+... ++. .+. .... .|.+++
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~-ev~S~~ 186 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVN-DITDLE 186 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCC-CEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccc-eEEEEE
Confidence 0 11111 0134466554 55 4568999999999999999641 111 111 1112 488999
Q ss_pred EcCCccE--EEeccccccc
Q 031924 131 IASVLCF--INSGFLSLNV 147 (150)
Q Consensus 131 ~~~~~~~--l~s~~~~~~v 147 (150)
|.+++-. +++....|+|
T Consensus 187 Fg~~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDI 205 (452)
T ss_dssp ECTTSSCEEEEECTTSCEE
T ss_pred EcCCCcEEEEEecCCCCCE
Confidence 9998753 3333344444
No 298
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.76 E-value=0.029 Score=40.00 Aligned_cols=121 Identities=12% Similarity=-0.026 Sum_probs=72.3
Q ss_pred EEEEEcCC----CeeeeeeccCCCcEEEEEEEeCCCEEEeec-CCCeEEEEEccccccc------------ccccccccc
Q 031924 19 LSVCNLRK----NTVQTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDC------------SDRFVGLSP 81 (150)
Q Consensus 19 i~i~d~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~~~~~~~~~------------~~~~~~~~~ 81 (150)
+.+.|.+. +.....+.........+..+|||+++++++ .+.++.++|++..... ...... ..
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CS
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CC
Confidence 56666655 222222223334557889999999987654 7889999998632111 111111 23
Q ss_pred cceeEeeecCCCEEEEecCCCcEEEEeccCC----------eeeeeccCCCCcceeEEEE------cCCccEEEecc
Q 031924 82 NSVDALLKLDEDRVITGSENGLISLVGILPN----------RIIQPIAEHSEYPIESLGI------ASVLCFINSGF 142 (150)
Q Consensus 82 ~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~----------~~~~~~~~~~~~~i~~~~~------~~~~~~l~s~~ 142 (150)
.+.......+|+...+-.-|..|.-|++... ..+..+.-|-. +-.+.- .|||++|++..
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq--pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ--PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSC--EEEEEETTTTSTTCCSCEEEEEE
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccC--CcccccCCCccCCCCccEEEEec
Confidence 3344444667766677778999999998643 35555554432 333333 57888888753
No 299
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.60 E-value=0.073 Score=35.01 Aligned_cols=108 Identities=7% Similarity=-0.065 Sum_probs=62.5
Q ss_pred eeecCc-ceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec--CCCeEEEEEccccccccccccc
Q 031924 2 TFAADA-MKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS--QSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 2 ~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
++++.+ ++.++-...+.|.++++..................+++.|.+..++... ..+.|..+++. +.....+..
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~ 162 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSRFIIIN 162 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT--SCSCEEEEC
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC--CCCeEEEEE
Confidence 455533 3444445677888888765433323334445678999998766665554 35788888874 332222211
Q ss_pred ccccceeEee-ecCCC-EEEEecCCCcEEEEeccC
Q 031924 79 LSPNSVDALL-KLDED-RVITGSENGLISLVGILP 111 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~-~l~~~~~dg~i~~~d~~~ 111 (150)
..-.....++ .+++. +..+-+..+.|..+|+..
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 0122334555 66444 445555678899998853
No 300
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.54 E-value=0.15 Score=37.74 Aligned_cols=128 Identities=13% Similarity=0.069 Sum_probs=75.6
Q ss_pred cCcceEEEEcCCCeEEEEEcCCCeeeeeec----cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccc---
Q 031924 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSE----FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV--- 77 (150)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--- 77 (150)
++++.|..|+.++-|..||..+++...... .....|.++...++|+..+ |+.+| +..|+... ++. ..+.
T Consensus 415 ~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~~G-l~~~~~~~-~~~-~~~~~~~ 490 (795)
T 4a2l_A 415 EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTLSA-LVRFNPEQ-RSF-TTIEKEK 490 (795)
T ss_dssp TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EESSC-EEEEETTT-TEE-EECCBCT
T ss_pred CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-EecCc-eeEEeCCC-CeE-EEccccc
Confidence 455536666676779999988876443221 1245788888888777544 44454 77788642 221 1121
Q ss_pred ---cccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeec---c---CCCCcceeEEEEcCCccEEEe
Q 031924 78 ---GLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPI---A---EHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 78 ---~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~---~---~~~~~~i~~~~~~~~~~~l~s 140 (150)
......+.++. ..++++.+... +-+..||..+++. ... . .... .|.++..+++|++.++
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~-~i~~i~~d~~g~lWig 559 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKL-FTNCIYEASNGIIWVG 559 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGS-CEEEEEECTTSCEEEE
T ss_pred cccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCC-eeEEEEECCCCCEEEE
Confidence 10235577776 56676665444 4578888876655 211 0 1112 4888999999886544
No 301
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.52 E-value=0.066 Score=33.57 Aligned_cols=128 Identities=9% Similarity=-0.052 Sum_probs=71.5
Q ss_pred CcceEEEEcCCCeEEEEEcCCCee------eeeecc-CCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNTV------QTRSEF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~~------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
.+..|+....| +++.=....+.. ..++-. .-..+..++|+|+|...++ .+|.+.-.+..+. ..+...+
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~--~~~~W~~ 77 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTH--DNDNWMG 77 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCS--TTCCHHH
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCC--Ccccccc
Confidence 44556666677 666655555431 112211 1246779999999886555 7777666554221 1111111
Q ss_pred ccccc--------eeEee-ecCCCEEEEecCCCcEEEEeccCCeee------eeccCCCCcceeEEEEcCCccEEEec
Q 031924 79 LSPNS--------VDALL-KLDEDRVITGSENGLISLVGILPNRII------QPIAEHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 79 ~~~~~--------v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
.... ..++. .++|.+.++ .||.|+-++..+...- ..+....-..+..+.+.|+|.+.+..
T Consensus 78 -s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 78 -RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp -HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred -cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 1111 24555 778877777 6699988876332110 11111111248899999999988876
No 302
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.52 E-value=0.15 Score=37.61 Aligned_cols=130 Identities=15% Similarity=0.166 Sum_probs=73.3
Q ss_pred cCcceEEEEcCCCeEEEEEcCCCeeeeeeccC-----CCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccc--
Q 031924 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFS-----EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV-- 77 (150)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-- 77 (150)
+++++.+ +.. +-|..||..+++........ ...+.++...++|+. ..|+.++-+..||... .....+.
T Consensus 459 ~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~--~~~~~~~~~ 533 (781)
T 3v9f_A 459 KNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF-WIGTFGGGVGIYTPDM--QLVRKFNQY 533 (781)
T ss_dssp TTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE-EEEESSSCEEEECTTC--CEEEEECTT
T ss_pred CCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE-EEEEcCCCEEEEeCCC--CeEEEccCC
Confidence 3444444 434 56888998876543322211 357888888887774 4455533366677642 2222221
Q ss_pred -cccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCC---CCcceeEEEEcCCccEEEec
Q 031924 78 -GLSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEH---SEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 78 -~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~s~ 141 (150)
+.....|.++. ..+|++.++. .+|-+..||..+++. ..+... ....|.++..+++|++.+++
T Consensus 534 ~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 534 EGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp TTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred CCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEc
Confidence 11234567776 5677665554 466658888876553 222211 12237788888888876654
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.43 E-value=0.11 Score=34.93 Aligned_cols=136 Identities=11% Similarity=0.104 Sum_probs=71.8
Q ss_pred eeecCcceEEEE------------cCCCeEEEEEcCCC--eee-eeecc-----CCCcEEEEEEEe--CCC-EEEee-cC
Q 031924 2 TFAADAMKLLGT------------SGDGTLSVCNLRKN--TVQ-TRSEF-----SEEELTSVVLMK--NGR-KVVCG-SQ 57 (150)
Q Consensus 2 ~~~~~~~~l~~~------------~~d~~i~i~d~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l~~~-~~ 57 (150)
+..|+|..++++ ..+|.|.++|..+. +.. ..+.+ ..-....+.+.+ ++. +|++. ..
T Consensus 56 ~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~ 135 (355)
T 3sre_A 56 EILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP 135 (355)
T ss_dssp EECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS
T ss_pred EEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC
Confidence 456666555554 26899999998742 221 12222 122577888877 343 34433 33
Q ss_pred --CCeEEEEEccccccc---ccccccccccceeEee-ecCCCEEEEecC-----------------CCcEEEEeccCCee
Q 031924 58 --SGTVLLYSWGYFKDC---SDRFVGLSPNSVDALL-KLDEDRVITGSE-----------------NGLISLVGILPNRI 114 (150)
Q Consensus 58 --d~~i~i~~~~~~~~~---~~~~~~~~~~~v~~~~-~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~ 114 (150)
+.++.+|++...+.. ...+.+..-...+.+. .++|++.++... .|.++.+|. ++.
T Consensus 136 ~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~ 213 (355)
T 3sre_A 136 GSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV 213 (355)
T ss_dssp TTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC
T ss_pred CCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE
Confidence 568888887543222 2223221122344554 677777666541 244555554 322
Q ss_pred eeeccCCCCcceeEEEEcCCccEEEec
Q 031924 115 IQPIAEHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 115 ~~~~~~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
..+...-. -.+.++|+||++.+..+
T Consensus 214 -~~~~~~l~-~pNGia~spDg~~lYva 238 (355)
T 3sre_A 214 -RVVAEGFD-FANGINISPDGKYVYIA 238 (355)
T ss_dssp -EEEEEEES-SEEEEEECTTSSEEEEE
T ss_pred -EEeecCCc-ccCcceECCCCCEEEEE
Confidence 22212122 37789999999765544
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.41 E-value=0.11 Score=34.75 Aligned_cols=103 Identities=14% Similarity=0.017 Sum_probs=56.6
Q ss_pred CCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccc-ccccc---ccccccceeEee-ecC---CCEE-EEecC---C---
Q 031924 37 EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-CSDRF---VGLSPNSVDALL-KLD---EDRV-ITGSE---N--- 101 (150)
Q Consensus 37 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~---~~~~~~~v~~~~-~~~---~~~l-~~~~~---d--- 101 (150)
-.....++|.|+|+.+++ ..+|.|++++.. ++ .+..+ .. .......+. .++ +..| ++-+. +
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~--G~~~~~~~~v~~~-g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISPS--GKKLVASFDVANV-GEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECSS--CEEEEEECCCCCS-TTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC--CceEeeccceeec-CCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 456789999999985554 566999988742 32 22111 11 123345555 665 3444 44332 3
Q ss_pred -CcEEEEeccCC-------e-eeeeccCCCCcceeEEEEcCCccEEEeccc
Q 031924 102 -GLISLVGILPN-------R-IIQPIAEHSEYPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 102 -g~i~~~d~~~~-------~-~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~ 143 (150)
..|..++.... + .+..+.....-....++|.|||.++++-+.
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 56777776543 1 112122111102467999999998877543
No 305
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.33 E-value=0.1 Score=33.63 Aligned_cols=133 Identities=11% Similarity=-0.005 Sum_probs=65.7
Q ss_pred CcceEEEEcCC-----CeEEEEEcCCCeeeee--eccCCCcEEEEEEEeCCCEEEeecCC-------CeEEEEEccccc-
Q 031924 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQS-------GTVLLYSWGYFK- 70 (150)
Q Consensus 6 ~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~i~~~~~~~- 70 (150)
+++.++.|+.+ ..+.+||..+.+-... +...... .+++ .-+++.++.|+.+ ..+.+||+....
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSS-VGVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBS-CEEE-EETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccC-ceEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 45555566533 3577888887653322 1111111 1222 2356666776542 357888875332
Q ss_pred ccccccccccccceeEeeecCCCEEEEecCC-----CcEEEEeccCCee--eeeccCCCCcceeEEEEcCCccEEEeccc
Q 031924 71 DCSDRFVGLSPNSVDALLKLDEDRVITGSEN-----GLISLVGILPNRI--IQPIAEHSEYPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 71 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~ 143 (150)
..+..++. +..-.++...++.+++.|+.+ ..+.+||+.+.+- +..+..... -..++ ..++++++.|+.
T Consensus 186 ~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~--~~~~~-~~~~~i~v~GG~ 260 (302)
T 2xn4_A 186 TYIAEMST--RRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR--NAGVC-AVNGLLYVVGGD 260 (302)
T ss_dssp EEECCCSS--CCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB--SCEEE-EETTEEEEECCB
T ss_pred EECCCCcc--ccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc--cCeEE-EECCEEEEECCc
Confidence 11222221 111113334567788888764 3688999877652 222211111 11122 236777777775
Q ss_pred cc
Q 031924 144 SL 145 (150)
Q Consensus 144 ~~ 145 (150)
+.
T Consensus 261 ~~ 262 (302)
T 2xn4_A 261 DG 262 (302)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.30 E-value=0.035 Score=37.21 Aligned_cols=72 Identities=11% Similarity=-0.008 Sum_probs=42.9
Q ss_pred CCcEEEEEEEeCCCEEEee-cCCCeEEEEEcccccccc--cccccccccceeEee-ec-CCCEEEEecCC-CcEEEEecc
Q 031924 37 EEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCS--DRFVGLSPNSVDALL-KL-DEDRVITGSEN-GLISLVGIL 110 (150)
Q Consensus 37 ~~~v~~~~~~~~~~~l~~~-~~d~~i~i~~~~~~~~~~--~~~~~~~~~~v~~~~-~~-~~~~l~~~~~d-g~i~~~d~~ 110 (150)
-...+.++|+||++.++.+ +..+.|..|++...+... +.+ . .......+. .. +|++.+++..+ +.|..|+..
T Consensus 220 l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 220 FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-S-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-E-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-e-CCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 3467899999999887655 467899999985333221 122 2 223344454 56 47777766544 344444443
No 307
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.29 E-value=0.12 Score=34.00 Aligned_cols=104 Identities=9% Similarity=-0.031 Sum_probs=57.9
Q ss_pred cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccc-ccccccceeEee-ecCCCEEEEecCCCcEEEEeccCC
Q 031924 35 FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF-VGLSPNSVDALL-KLDEDRVITGSENGLISLVGILPN 112 (150)
Q Consensus 35 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~ 112 (150)
.....+..+.+.+++..++.+...+..+-.|-. +..-+.+ .. ....+..+. .++++.++ .+.+|.++..+...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g--G~tW~~~~~~-~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG--QTAWEPHNRT-TSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTT--CSSCEEEECC-SSSCEEEEEECTTSCEEE-EETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC--CCceeECCCC-CCCccceeEECCCCCEEE-EeCCceEEEecCCCC
Confidence 445578899999988887776544433333420 1111111 12 334555555 56666554 455788777643334
Q ss_pred eeeeeccCC---CCcceeEEEEcCCccEEEecc
Q 031924 113 RIIQPIAEH---SEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 113 ~~~~~~~~~---~~~~i~~~~~~~~~~~l~s~~ 142 (150)
+....+... ....+..+++.+++.+++.+.
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 433333211 112478889998888777654
No 308
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.28 E-value=0.13 Score=34.45 Aligned_cols=125 Identities=14% Similarity=0.139 Sum_probs=74.0
Q ss_pred CCeEEEEEc--CCCeeeeeecc------CC-CcEEEEEE--EeC-CC-EEEeecCCCeEEEEEccc------cccccccc
Q 031924 16 DGTLSVCNL--RKNTVQTRSEF------SE-EELTSVVL--MKN-GR-KVVCGSQSGTVLLYSWGY------FKDCSDRF 76 (150)
Q Consensus 16 d~~i~i~d~--~~~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~i~i~~~~~------~~~~~~~~ 76 (150)
+++|.+|++ .+++ +..+.. .. ..+..+++ +|. +. ++++...+|.+..|++.. ..+.+.+|
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 589999977 3443 333311 11 34556666 664 43 677888889999998842 12455666
Q ss_pred ccccccceeEeeecCCCEEEEecCCCcEEEEecc-----CCeeeeecc-CCCCcceeEEEE--cCCcc-EEEecc
Q 031924 77 VGLSPNSVDALLKLDEDRVITGSENGLISLVGIL-----PNRIIQPIA-EHSEYPIESLGI--ASVLC-FINSGF 142 (150)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~-----~~~~~~~~~-~~~~~~i~~~~~--~~~~~-~l~s~~ 142 (150)
.. ....-.|...+....|+.+-++.-|..++.+ +.+.+..+. .+-...+..|++ .++++ +|+..+
T Consensus 177 ~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 177 KM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp EC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred cC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 64 3333334447777788888888777777755 234555442 222224788887 45555 444433
No 309
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.27 E-value=0.2 Score=36.25 Aligned_cols=110 Identities=8% Similarity=-0.046 Sum_probs=62.9
Q ss_pred CeeecCcceEE-EEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecC--CCeEEEEEcccccccccccc
Q 031924 1 MTFAADAMKLL-GTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFV 77 (150)
Q Consensus 1 i~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~ 77 (150)
|++++.++.|+ +-...+.|.+.++..................+++.|.+.+|+.... .+.|...++. +.....+.
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d--G~~~~~l~ 166 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSRFIII 166 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEE
T ss_pred EEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC--CCceEEEE
Confidence 45677545444 4456789999998765333233234455689999997655554443 4567666664 33222222
Q ss_pred cccccceeEee-ecC-CCEEEEecCCCcEEEEeccCC
Q 031924 78 GLSPNSVDALL-KLD-EDRVITGSENGLISLVGILPN 112 (150)
Q Consensus 78 ~~~~~~v~~~~-~~~-~~~l~~~~~dg~i~~~d~~~~ 112 (150)
...-.....+. .++ ++++.+-...+.|..+|+...
T Consensus 167 ~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 167 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 10223344555 554 445555556778888888543
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.15 E-value=0.13 Score=33.19 Aligned_cols=133 Identities=9% Similarity=0.066 Sum_probs=66.6
Q ss_pred CcceEEEEcCC----CeEEEEEcCCCeeeee--eccCCCcEEEEEEEeCCCEEEeecCC------CeEEEEEccccc-cc
Q 031924 6 DAMKLLGTSGD----GTLSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQS------GTVLLYSWGYFK-DC 72 (150)
Q Consensus 6 ~~~~l~~~~~d----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~~~~~~~-~~ 72 (150)
+++.++.|+.+ ..+.+||..+++-... +.........+ .-+++.++.|+.+ ..+.+||..... ..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC--AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE--EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE--EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 44555566533 6788899888753322 11111111222 2366777777654 468888875332 11
Q ss_pred ccccccccccceeEeeecCCCEEEEecC---------CCcEEEEeccCCee--eeeccCCCCcceeEEEEcCCccEEEec
Q 031924 73 SDRFVGLSPNSVDALLKLDEDRVITGSE---------NGLISLVGILPNRI--IQPIAEHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 73 ~~~~~~~~~~~v~~~~~~~~~~l~~~~~---------dg~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
...++. +..-.++...++++++.|+. ...+..||+.+.+- +..+..... -..+.. -++++++.|
T Consensus 133 ~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~-~~~~i~v~G 207 (306)
T 3ii7_A 133 KPSMLT--QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK--NHGLVF-VKDKIFAVG 207 (306)
T ss_dssp ECCCSS--CCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB--SCEEEE-ETTEEEEEC
T ss_pred CCCCcC--CcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh--cceEEE-ECCEEEEEe
Confidence 112221 11111233456777777764 34588899877652 222211111 112222 267777777
Q ss_pred cccc
Q 031924 142 FLSL 145 (150)
Q Consensus 142 ~~~~ 145 (150)
+.+.
T Consensus 208 G~~~ 211 (306)
T 3ii7_A 208 GQNG 211 (306)
T ss_dssp CEET
T ss_pred CCCC
Confidence 7543
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.06 E-value=0.26 Score=35.66 Aligned_cols=134 Identities=9% Similarity=-0.058 Sum_probs=70.6
Q ss_pred CeeecCcceEEEEc-CCCeEEEEEcCCCee-eeeeccCCCcEEEEEEEeCCCEE-EeecCCCeEEEEEcccccccccccc
Q 031924 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNTV-QTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFV 77 (150)
Q Consensus 1 i~~~~~~~~l~~~~-~d~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~ 77 (150)
|+|++.+..|+.+. ..+.|..+++..... ...+.........+++.+.++.| ++-...+.|.+.++. +.....+.
T Consensus 45 ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d--G~~~~~l~ 122 (619)
T 3s94_A 45 VDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD--GSLRKVLF 122 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEE
T ss_pred EEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC--CCCEEEEE
Confidence 35677555555543 567788888765422 22233333567899999865555 455567899999985 33222222
Q ss_pred -cccccceeEee-ecC-CCEEEEecC-CCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE
Q 031924 78 -GLSPNSVDALL-KLD-EDRVITGSE-NGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 78 -~~~~~~v~~~~-~~~-~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
. .-.....++ .+. +.++.+-.. .+.|...++............-. ....+++++++..|
T Consensus 123 ~~-~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~-~P~Glald~~~~~L 185 (619)
T 3s94_A 123 WQ-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY-WPNGLTLDYEEQKL 185 (619)
T ss_dssp CS-SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS-SEEEEEEETTTTEE
T ss_pred eC-CCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCC-CCcEEEEEccCCEE
Confidence 2 222233444 554 444444322 45677667643222222212222 37788999864433
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.05 E-value=0.15 Score=32.84 Aligned_cols=132 Identities=9% Similarity=0.011 Sum_probs=66.4
Q ss_pred CcceEEEEcCC-----CeEEEEEcCCCeeee--eeccCCCcEEEEEEEeCCCEEEeecCC-----CeEEEEEccccc-cc
Q 031924 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFK-DC 72 (150)
Q Consensus 6 ~~~~l~~~~~d-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~-~~ 72 (150)
+++.++.|+.+ ..+.+||..+.+-.. ........- ++. ..+++.++.|+.+ ..+.+||+.... ..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA-GLV-VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC-EEE-EETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc-eEE-EECCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 45555555432 468889988765332 222111111 222 2367777777654 458888875322 11
Q ss_pred ccccccccccceeEeeecCCCEEEEecCC-----CcEEEEeccCCeee--eeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 73 SDRFVGLSPNSVDALLKLDEDRVITGSEN-----GLISLVGILPNRII--QPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 73 ~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
+..++. +..-.++...++++++.|+.+ ..+.+||+.+.+-. ..+..... ....+ .-++++++.|+.+
T Consensus 190 ~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~-~~~~~--~~~~~i~v~GG~~ 263 (301)
T 2vpj_A 190 VTPMAT--KRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRC-YVGAT--VLRGRLYAIAGYD 263 (301)
T ss_dssp ECCCSS--CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB-SCEEE--EETTEEEEECCBC
T ss_pred CCCCCc--ccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCccc-ceeEE--EECCEEEEEcCcC
Confidence 112221 111112334567788888764 46889999876532 22211111 12222 2367777777754
No 313
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.97 E-value=0.33 Score=36.21 Aligned_cols=110 Identities=11% Similarity=-0.056 Sum_probs=64.9
Q ss_pred CeeecCcceEE-EEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecC--CCeEEEEEcccccccccccc
Q 031924 1 MTFAADAMKLL-GTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFV 77 (150)
Q Consensus 1 i~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~ 77 (150)
|++++.++.|+ +-...+.|.+.++........+.........+++.|.+.+|+.... .+.|...++. +.....+.
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--G~~~~~lv 553 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLV 553 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCCEEEEE
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC--CCceEEEE
Confidence 35666554444 4456788999998765433333344456789999998666655542 3678888875 33222222
Q ss_pred cccccceeEee-ec-CCCEEEEecCCCcEEEEeccCC
Q 031924 78 GLSPNSVDALL-KL-DEDRVITGSENGLISLVGILPN 112 (150)
Q Consensus 78 ~~~~~~v~~~~-~~-~~~~l~~~~~dg~i~~~d~~~~ 112 (150)
...-.....++ .+ .++++++-...+.|...++...
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 10223445555 54 4444555456678888888543
No 314
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.93 E-value=0.2 Score=33.38 Aligned_cols=104 Identities=11% Similarity=0.059 Sum_probs=57.2
Q ss_pred CCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccc---ccccccceeEee-ecC---CCEEE-EecCC-----Cc
Q 031924 37 EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF---VGLSPNSVDALL-KLD---EDRVI-TGSEN-----GL 103 (150)
Q Consensus 37 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~---~~~~~~~v~~~~-~~~---~~~l~-~~~~d-----g~ 103 (150)
-.....++|.|+|+.+++ ..+|.|++++ ......+..+ .. .......+. +++ +..|+ +-... +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~-g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHR-GESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCS-TTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE-CCCccEeecceEeec-CCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 445689999999985554 5669999987 3211211111 11 123345555 665 44444 43332 56
Q ss_pred EEEEeccCCe------eeeeccC--CCCcceeEEEEcCCccEEEeccc
Q 031924 104 ISLVGILPNR------IIQPIAE--HSEYPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 104 i~~~d~~~~~------~~~~~~~--~~~~~i~~~~~~~~~~~l~s~~~ 143 (150)
|..++..... .+..+.. ........++|.|||.++++-+.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 7777775431 2222321 11112468999999988777543
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.90 E-value=0.18 Score=32.65 Aligned_cols=133 Identities=8% Similarity=-0.065 Sum_probs=65.9
Q ss_pred CcceEEEEcCC-----CeEEEEEcCCCeeeee--eccCCCcEEEEEEEeCCCEEEeecCC-----CeEEEEEccccc-cc
Q 031924 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFK-DC 72 (150)
Q Consensus 6 ~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~-~~ 72 (150)
+++.++.|+.+ ..+.+||..+.+-... +......-..+. -++..++.|+.+ ..+.+||+.... ..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV--LNRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE--ECCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 44555555422 4678889887653321 111111112222 266667777654 458888875332 11
Q ss_pred ccccccccccceeEeeecCCCEEEEecCC-----CcEEEEeccCCeeee--eccCCCCcceeEEEEcCCccEEEeccccc
Q 031924 73 SDRFVGLSPNSVDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQ--PIAEHSEYPIESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 73 ~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~s~~~~~ 145 (150)
+..++. +..-.++...++++++.|+.+ ..+.+||+.+.+-.. .+..... -.+++. -++++++.|+.+.
T Consensus 199 ~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~--~~~~~~-~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 199 ITAMNT--IRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS--ALGITV-HQGRIYVLGGYDG 273 (308)
T ss_dssp CCCCSS--CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB--SCEEEE-ETTEEEEECCBCS
T ss_pred CCCCCC--ccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc--ceEEEE-ECCEEEEEcCcCC
Confidence 122221 111112334467788888765 468899997765322 2211111 112222 3677777777543
No 316
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.86 E-value=0.18 Score=39.25 Aligned_cols=95 Identities=13% Similarity=0.186 Sum_probs=59.6
Q ss_pred CeEEEEEcCCCeeeeeeccC-CCcEEEEEEEe----CCCEEEeec----------CCCeEEEEEccccccccccc-cccc
Q 031924 17 GTLSVCNLRKNTVQTRSEFS-EEELTSVVLMK----NGRKVVCGS----------QSGTVLLYSWGYFKDCSDRF-VGLS 80 (150)
Q Consensus 17 ~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~----~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~-~~~~ 80 (150)
..|++.|..+.+.+..++-. .+.+.+++... ...++++|+ ..|.|.+|++.. .+..... .. .
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~-~kL~lv~~~~-v 884 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSD-GKLQTVAEKE-V 884 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEET-TEEEEEEEEE-E
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEEC-CEEEEEEEEE-c
Confidence 46888898887766555433 34455555432 246888876 358899999852 2221111 12 4
Q ss_pred ccceeEeeecCCCEEEEecCCCcEEEEeccCCeee
Q 031924 81 PNSVDALLKLDEDRVITGSENGLISLVGILPNRII 115 (150)
Q Consensus 81 ~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 115 (150)
++++++++..+|+++++. ...+++|++...+.+
T Consensus 885 ~g~v~al~~~~g~Lla~i--g~~l~vy~l~~~~~L 917 (1158)
T 3ei3_A 885 KGAVYSMVEFNGKLLASI--NSTVRLYEWTTEKEL 917 (1158)
T ss_dssp SSCEEEEEEETTEEEEEE--TTEEEEEEECTTSCE
T ss_pred CCcCEEEeeeCCEEEEEc--CCEEEEEECCCCceE
Confidence 677888887788666544 468999999765433
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.76 E-value=0.21 Score=32.39 Aligned_cols=123 Identities=12% Similarity=0.064 Sum_probs=60.1
Q ss_pred CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecC-C-----CeEEEEEccccc-ccccccccccccceeEeee
Q 031924 17 GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-S-----GTVLLYSWGYFK-DCSDRFVGLSPNSVDALLK 89 (150)
Q Consensus 17 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~~ 89 (150)
..+.+||..+.+-...-..........+...+++.++.|+. + ..+.+||..... ..+..++. +..-.++..
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~ 194 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQT--ARSLFGATV 194 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCC--chhceEEEE
Confidence 45888998876532211111111111122246666777765 2 468888875332 11222221 111112334
Q ss_pred cCCCEEEEecCCC-----cEEEEeccCCee--eeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 90 LDEDRVITGSENG-----LISLVGILPNRI--IQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 90 ~~~~~l~~~~~dg-----~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
.++++++.|+.++ .+.+||+.+.+- +..+... .... +++ .-++++++.|+.+
T Consensus 195 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~-~~~-~~~~~l~v~GG~~ 253 (315)
T 4asc_A 195 HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQE-RSSL-SLV-SLVGTLYAIGGFA 253 (315)
T ss_dssp ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSC-CBSC-EEE-EETTEEEEEEEEE
T ss_pred ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCc-ccce-eEE-EECCEEEEECCcc
Confidence 4777888887654 578889877652 2222111 1111 222 2366777777764
No 318
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.75 E-value=0.36 Score=34.95 Aligned_cols=133 Identities=11% Similarity=0.036 Sum_probs=74.5
Q ss_pred CeeecCcceEEEE-cCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEE-EeecCCCeEEEEEcccccccccccc-
Q 031924 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFV- 77 (150)
Q Consensus 1 i~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~- 77 (150)
|+|++.+..|+.+ ..++.|..+++........+.........+++.+.+..| ++-...+.|.+.++. +.....+.
T Consensus 42 l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d--G~~~~~l~~ 119 (628)
T 4a0p_A 42 LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD--GQHRQVLVW 119 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--STTCEEEEC
T ss_pred EEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC--CCcEEEEEe
Confidence 4677765555544 467888888887553333333333456788998765555 555566889999875 22222222
Q ss_pred cccccceeEee-ecC-CCEEEEec-CCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEE
Q 031924 78 GLSPNSVDALL-KLD-EDRVITGS-ENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFI 138 (150)
Q Consensus 78 ~~~~~~v~~~~-~~~-~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (150)
. .-.....++ .|. |.++.+-. ..+.|...++..... ..+...-. ....+++++++..|
T Consensus 120 ~-~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~-~P~GlalD~~~~~L 180 (628)
T 4a0p_A 120 K-DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVG-RANGLTIDYAKRRL 180 (628)
T ss_dssp S-SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCS-SEEEEEEETTTTEE
T ss_pred C-CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCC-CcceEEEccccCEE
Confidence 2 223345555 664 44444432 256777777754332 22212223 37788999865443
No 319
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.73 E-value=0.53 Score=36.74 Aligned_cols=101 Identities=16% Similarity=0.223 Sum_probs=60.2
Q ss_pred eEEEEcCCCeEEEEEcCCCeeee-eeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccc-ccccccceeE
Q 031924 9 KLLGTSGDGTLSVCNLRKNTVQT-RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF-VGLSPNSVDA 86 (150)
Q Consensus 9 ~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~~~v~~ 86 (150)
+|+++ ..+++++|++...+.+. ...... .+..+.....++++++|+.-..+.++..+........+ ....+.++++
T Consensus 897 ~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta 974 (1158)
T 3ei3_A 897 KLLAS-INSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSA 974 (1158)
T ss_dssp EEEEE-ETTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEE
T ss_pred EEEEE-cCCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEE
Confidence 45555 34689999998765333 111111 12333343458899999887777776543222222222 1114566777
Q ss_pred eeecCCCEEEEecCCCcEEEEeccC
Q 031924 87 LLKLDEDRVITGSENGLISLVGILP 111 (150)
Q Consensus 87 ~~~~~~~~l~~~~~dg~i~~~d~~~ 111 (150)
+...+...++.+..+|.+.+....+
T Consensus 975 ~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 975 VEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEETTEEEEEETTSEEEEEEECT
T ss_pred EEEEccCcEEEEcCCCcEEEEecCC
Confidence 7655566888888999999886543
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.65 E-value=0.25 Score=32.44 Aligned_cols=134 Identities=10% Similarity=-0.007 Sum_probs=69.9
Q ss_pred eeecCcceEEEEcCCCeEEEEEc--CCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccc-
Q 031924 2 TFAADAMKLLGTSGDGTLSVCNL--RKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (150)
Q Consensus 2 ~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~- 78 (150)
.+.|++++++.+...+..+-.|- .+.+.+. ......+..+.+.++++.++ .+.+|.+++.+.. .++.-..+..
T Consensus 169 ~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D-~G~tW~~~~~~ 244 (327)
T 2xbg_A 169 NRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPD-NSENWGELLSP 244 (327)
T ss_dssp EECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETT-EEEEECCCBCT
T ss_pred EEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCC-CCCeeEeccCC
Confidence 45667777766644433333442 2222221 23445788899988887554 4467887776321 1222111211
Q ss_pred --ccccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccC---CCCcceeEEEEcCCccEEEecc
Q 031924 79 --LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAE---HSEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 79 --~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~s~~ 142 (150)
.....+..+. .+++..++.+ .++.+ ++....++....+.. ... .+..+.|.+++++++.|.
T Consensus 245 ~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~-~~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 245 LRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPS-NFYKILFFSPDQGFILGQ 311 (327)
T ss_dssp TSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSS-CCCEEEEEETTEEEEECS
T ss_pred cccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCC-CeEEEEEECCCceEEEcC
Confidence 0123455665 4455555554 46766 344444554443321 223 377888887777666654
No 321
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.65 E-value=0.25 Score=32.32 Aligned_cols=124 Identities=6% Similarity=-0.102 Sum_probs=66.4
Q ss_pred eecCcceEEEEcCC--------------CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec--CCCeEEEEEc
Q 031924 3 FAADAMKLLGTSGD--------------GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS--QSGTVLLYSW 66 (150)
Q Consensus 3 ~~~~~~~l~~~~~d--------------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~~~ 66 (150)
++++++.|+-+... ..|+..++..++... +... . +..+++++++|+-.. .++.-.||.+
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECS--C--EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecC--C--ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 46777777766532 356777776654322 2211 1 236788888887654 3455555555
Q ss_pred ccccccccccccccccceeEeeecCCCEEEEecC-CCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEe
Q 031924 67 GYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSE-NGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 67 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 140 (150)
...+...+++.. +.. .. ..++++.|.-.+. ...|...++..+.....+. + +.. ..+.|++.+|+-
T Consensus 135 ~~dGs~~~~lt~-~~~--~~-~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~-~~~-~~~~P~g~~iy~ 200 (302)
T 3s25_A 135 RIDGEEKKKIKN-HYL--FT-CNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---C-NCY-KPVVLDDTNVYY 200 (302)
T ss_dssp ETTSCCCEEEES-SCC--CC-SEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---S-CEE-EEEEEETTEEEE
T ss_pred ECCCCCeEEEeC-CCc--eE-eeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---C-Ccc-ceeeecCCEEEE
Confidence 434444455544 322 11 2566666665544 5678888876554333322 1 121 234577766553
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.53 E-value=0.26 Score=31.71 Aligned_cols=133 Identities=7% Similarity=-0.061 Sum_probs=65.8
Q ss_pred CcceEEEEcCC-----CeEEEEEcCCCe---eee--eeccCCCcEEEEEEEeCCCEEEeecCC-----CeEEEEEccccc
Q 031924 6 DAMKLLGTSGD-----GTLSVCNLRKNT---VQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFK 70 (150)
Q Consensus 6 ~~~~l~~~~~d-----~~i~i~d~~~~~---~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~ 70 (150)
+++.++.|+.+ ..+.+||..+++ -.. .+....... ++. ..++..++.|+.+ ..+.+||.....
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-GAT-TLGDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-EEE-EETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-eEE-EECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 45556666533 468899988765 222 111111111 222 2366777777643 368888875322
Q ss_pred -ccccccccccccceeEeeecCCCEEEEecCC-----CcEEEEeccCCeeee--eccCCCCcceeEEEEcCCccEEEecc
Q 031924 71 -DCSDRFVGLSPNSVDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQ--PIAEHSEYPIESLGIASVLCFINSGF 142 (150)
Q Consensus 71 -~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~s~~ 142 (150)
.....++. ...-.++...++++++.|+.+ ..+..||+.+.+-.. .+..... -.++. ..++++++.|+
T Consensus 140 W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--~~~~~-~~~~~i~v~GG 214 (301)
T 2vpj_A 140 WSMLGDMQT--AREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS--GAGVA-LLNDHIYVVGG 214 (301)
T ss_dssp EEEEEECSS--CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB--SCEEE-EETTEEEEECC
T ss_pred EEECCCCCC--CcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc--cceEE-EECCEEEEEeC
Confidence 11111211 111112334467788887754 468889987765322 2211111 11222 23677777777
Q ss_pred ccc
Q 031924 143 LSL 145 (150)
Q Consensus 143 ~~~ 145 (150)
.+.
T Consensus 215 ~~~ 217 (301)
T 2vpj_A 215 FDG 217 (301)
T ss_dssp BCS
T ss_pred CCC
Confidence 643
No 323
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.30 E-value=0.33 Score=34.89 Aligned_cols=65 Identities=11% Similarity=0.049 Sum_probs=47.8
Q ss_pred eeecCcceEEEEc-CCCeEEEEEcCCC------ee-------eeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcc
Q 031924 2 TFAADAMKLLGTS-GDGTLSVCNLRKN------TV-------QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG 67 (150)
Q Consensus 2 ~~~~~~~~l~~~~-~d~~i~i~d~~~~------~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~ 67 (150)
..+|||+++++++ .+.++.++|.++- +. ....+.-. ...-.+|.++|....+--.|..|..|++.
T Consensus 329 ~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl-GPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 329 NTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL-GPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS-CEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred eeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC-cccEEEECCCCceEeeeeecceEEEEecc
Confidence 5789999998876 6889999998752 11 22222222 45678899999666777799999999985
No 324
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.28 E-value=0.34 Score=31.52 Aligned_cols=135 Identities=13% Similarity=0.092 Sum_probs=64.5
Q ss_pred CcceEEEEcCC-------CeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecC------CCeEEEEEccccc-c
Q 031924 6 DAMKLLGTSGD-------GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ------SGTVLLYSWGYFK-D 71 (150)
Q Consensus 6 ~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~~~~~~~-~ 71 (150)
+++.++.|+.+ ..+.+||..+.+-...-..........+...+++.++.|+. -..+.+||..... .
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 44555555532 35778888876533221111111111112246666677763 2358889975332 1
Q ss_pred cccccccccccceeEeeecCCCEEEEecCCC-----cEEEEeccCCee--eeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 72 CSDRFVGLSPNSVDALLKLDEDRVITGSENG-----LISLVGILPNRI--IQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
....++. +..-.++...++++++.|+.++ .+.+||+.+.+- +..+..... -.++. ..++++++.|+.+
T Consensus 189 ~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~-~~~~~i~v~GG~~ 263 (318)
T 2woz_A 189 DLAPMKT--PRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS--SISLV-SLAGSLYAIGGFA 263 (318)
T ss_dssp EECCCSS--CCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB--SCEEE-EETTEEEEECCBC
T ss_pred ECCCCCC--CcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc--ceEEE-EECCEEEEECCee
Confidence 1112211 1111133345677888877543 467888876542 222211111 11222 3456777777764
Q ss_pred c
Q 031924 145 L 145 (150)
Q Consensus 145 ~ 145 (150)
.
T Consensus 264 ~ 264 (318)
T 2woz_A 264 M 264 (318)
T ss_dssp C
T ss_pred c
Confidence 3
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.27 E-value=0.32 Score=31.27 Aligned_cols=133 Identities=11% Similarity=0.005 Sum_probs=64.8
Q ss_pred CcceEEEEcCC-----CeEEEEEcCCCeeeee--eccCCCcEEEEEEEeCCCEEEeecCCC-----eEEEEEccccc-cc
Q 031924 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQSG-----TVLLYSWGYFK-DC 72 (150)
Q Consensus 6 ~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~~~~~~~-~~ 72 (150)
+++.++.|+.+ ..+.+||..+.+-... +......- +++ ..++..++.|+.++ .+.+||+.... ..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-GAA-VLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-EEE-EECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 44555555533 3588899887653322 11111111 222 23667777776543 56778875322 11
Q ss_pred ccccccccccceeEeeecCCCEEEEecCC-------CcEEEEeccCCee--eeeccCCCCcceeEEEEcCCccEEEeccc
Q 031924 73 SDRFVGLSPNSVDALLKLDEDRVITGSEN-------GLISLVGILPNRI--IQPIAEHSEYPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 73 ~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~ 143 (150)
...++. +..-.++...++++++.|+.+ ..+..||+.+.+- +..+..... .. +++ .-++++++.|+.
T Consensus 139 ~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~-~~~-~~~~~iyv~GG~ 213 (302)
T 2xn4_A 139 VAPMNT--RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRS-GA-GVG-VLNNLLYAVGGH 213 (302)
T ss_dssp ECCCSS--CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCB-SC-EEE-EETTEEEEECCB
T ss_pred cCCCCC--cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccc-cc-cEE-EECCEEEEECCC
Confidence 112221 111112334567777777643 3588899877652 222221111 11 222 236777777775
Q ss_pred cc
Q 031924 144 SL 145 (150)
Q Consensus 144 ~~ 145 (150)
+.
T Consensus 214 ~~ 215 (302)
T 2xn4_A 214 DG 215 (302)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 326
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.07 E-value=0.65 Score=33.67 Aligned_cols=133 Identities=11% Similarity=-0.011 Sum_probs=71.7
Q ss_pred eeecCcceE-EEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeec--CCCeEEEEEccccccccccccc
Q 031924 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS--QSGTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 2 ~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~ 78 (150)
++++.+..| ++-...+.|.+.++..................+++.|....|+... ..+.|...++. +.....+..
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d--G~~~~~l~~ 163 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD--GSERTTLVP 163 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEEC
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC--CCceEEEEC
Confidence 455544444 4445677888888875433222223445678999998655555544 25677777764 332222222
Q ss_pred ccccceeEee-ecCCC-EEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEe
Q 031924 79 LSPNSVDALL-KLDED-RVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 79 ~~~~~v~~~~-~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 140 (150)
.-.....+. .++++ +..+-...+.|..+|+..... +.+..... ....+++.. +.++.+
T Consensus 164 -~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~-~P~glav~~-~~ly~t 223 (628)
T 4a0p_A 164 -NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLP-HPFGLTQYQ-DYIYWT 223 (628)
T ss_dssp -SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCS-CEEEEEEET-TEEEEE
T ss_pred -CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCC-CceEEEEEC-CEEEEe
Confidence 233345555 66544 445555677899998854322 22222222 244566654 344443
No 327
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.03 E-value=0.73 Score=34.05 Aligned_cols=126 Identities=13% Similarity=0.133 Sum_probs=71.6
Q ss_pred EEEEcCCCeEEEEEcCCCeeeeee---ccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccc--cccccce
Q 031924 10 LLGTSGDGTLSVCNLRKNTVQTRS---EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV--GLSPNSV 84 (150)
Q Consensus 10 l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--~~~~~~v 84 (150)
|..|+.++-|..||..+++..... ......|.++...++|. |..|+.++-+..++... ++ ...+. ......|
T Consensus 376 lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~v 452 (781)
T 3v9f_A 376 LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRL-KK-FQIIELEKNELLDV 452 (781)
T ss_dssp EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSS-CE-EEECCSTTTCCCCE
T ss_pred EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCC-Cc-EEEeccCCCCCCeE
Confidence 444555556888887655332211 12235788888777666 55577766788888642 22 12221 1024567
Q ss_pred eEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCC-----CCcceeEEEEcCCccEEEec
Q 031924 85 DALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEH-----SEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 85 ~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~s~ 141 (150)
.++. ..++++.+ |+. +-+..+|..+++........ .. .|.++..+++|++.+..
T Consensus 453 ~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~-~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 453 RVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLEN-FVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp EEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCS-CEEEEEECTTCCEEEEE
T ss_pred EEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccc-eeEEEEEcCCCCEEEEE
Confidence 7776 45555444 444 45888888765533222111 23 48899999988865543
No 328
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.00 E-value=0.4 Score=30.89 Aligned_cols=131 Identities=8% Similarity=-0.085 Sum_probs=66.6
Q ss_pred ceEEEEcC--CCeEEEEEcCCCeeeee--eccCCCcEEEEEEEeCCCEEEeecCC----CeEEEEEccccc-cccccccc
Q 031924 8 MKLLGTSG--DGTLSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQS----GTVLLYSWGYFK-DCSDRFVG 78 (150)
Q Consensus 8 ~~l~~~~~--d~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~~~~~~~-~~~~~~~~ 78 (150)
.+++.|+. ...+.+||..+++-... +......-..+ ..++..++.|+.+ ..+.+||..... .....++.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACV--FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEE--EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEE--EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34555543 46789999988754321 11111111122 2366777777754 678888875321 11112221
Q ss_pred ccccceeEeeecCCCEEEEecCC------CcEEEEeccCCee--eeeccCCCCcceeEEEEcCCccEEEeccccc
Q 031924 79 LSPNSVDALLKLDEDRVITGSEN------GLISLVGILPNRI--IQPIAEHSEYPIESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~~ 145 (150)
+..-.++...++++++.|+.+ ..+.+||+.+.+- +..+..... -.+++ ..++++++.|+...
T Consensus 91 --~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--~~~~~-~~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 91 --PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC--SHGMV-EANGLIYVCGGSLG 160 (306)
T ss_dssp --CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB--SCEEE-EETTEEEEECCEES
T ss_pred --cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc--eeEEE-EECCEEEEECCCCC
Confidence 111112334467788888765 4688899877652 222211111 11222 23677777777543
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.91 E-value=0.48 Score=31.29 Aligned_cols=124 Identities=7% Similarity=-0.019 Sum_probs=57.6
Q ss_pred CeEEEEEcCCCeeeee--eccCCCcEEEEEEEeCCCEEEeecC------CCeEEEEEc--cccc-ccccccccccccc-e
Q 031924 17 GTLSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQ------SGTVLLYSW--GYFK-DCSDRFVGLSPNS-V 84 (150)
Q Consensus 17 ~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~~~--~~~~-~~~~~~~~~~~~~-v 84 (150)
+.+.+||..+.+-... +......-.+++. -+++.++.|+. ...+..||+ .... ..+..+.. .... -
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~-~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSS-PDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSST-TTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCC-Cccccc
Confidence 5789999988653322 2111111022222 35666666653 235666775 2111 11112211 1111 1
Q ss_pred eEeeecCCCEEEEecCC----------------------CcEEEEeccCCe--eeeeccCCCCcceeEEEEcCCccEEEe
Q 031924 85 DALLKLDEDRVITGSEN----------------------GLISLVGILPNR--IIQPIAEHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 85 ~~~~~~~~~~l~~~~~d----------------------g~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~s 140 (150)
.++...++.+++.|+.+ ..+.+||+.+.+ .+..+..... ...+...++++++.
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~~~~i~v~ 322 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRA---YGVSLPWNNSLLII 322 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCB---SSEEEEETTEEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcc---cceeEEeCCEEEEE
Confidence 12335567788887742 257788887654 3333322211 12223356778787
Q ss_pred ccccc
Q 031924 141 GFLSL 145 (150)
Q Consensus 141 ~~~~~ 145 (150)
|+.+.
T Consensus 323 GG~~~ 327 (357)
T 2uvk_A 323 GGETA 327 (357)
T ss_dssp EEECG
T ss_pred eeeCC
Confidence 77654
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.62 E-value=0.53 Score=30.45 Aligned_cols=121 Identities=10% Similarity=-0.002 Sum_probs=59.1
Q ss_pred CeEEEEEcCCCeeeee--eccCCCcEEEEEEEeCCCEEEeecCC-----CeEEEEEccccc-ccccccccccccceeEee
Q 031924 17 GTLSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFK-DCSDRFVGLSPNSVDALL 88 (150)
Q Consensus 17 ~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~ 88 (150)
..+.+||..+.+-... +.........+ .-+++.++.|+.+ ..+.+||..... .....++. ... -.+..
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~-~~~~~ 165 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVG--VIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT-RRI-GVGVA 165 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEE--EETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS-CCB-SCEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEE--EECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc-ccc-ceEEE
Confidence 4678889887653321 11111111222 2266777777643 357888875322 11222221 111 11223
Q ss_pred ecCCCEEEEecCC-----CcEEEEeccCCeee--eeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 89 KLDEDRVITGSEN-----GLISLVGILPNRII--QPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 89 ~~~~~~l~~~~~d-----g~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
..++.+++.|+.+ ..+..||+.+.+-. ..+..... .- +++. -++++++.|+.+
T Consensus 166 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~-~~~~-~~~~iyv~GG~~ 225 (308)
T 1zgk_A 166 VLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS-GA-GVCV-LHNCIYAAGGYD 225 (308)
T ss_dssp EETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB-SC-EEEE-ETTEEEEECCBC
T ss_pred EECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc-cc-eEEE-ECCEEEEEeCCC
Confidence 3467777887754 45888998766522 22211111 12 2222 267777777654
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.82 E-value=0.82 Score=29.62 Aligned_cols=120 Identities=10% Similarity=0.005 Sum_probs=57.3
Q ss_pred EEEEEcCCCeeeeeeccCCCcE-EEEEEEeCCCEEEeecCC--------CeEEEEEccccc-ccccccccccccceeEee
Q 031924 19 LSVCNLRKNTVQTRSEFSEEEL-TSVVLMKNGRKVVCGSQS--------GTVLLYSWGYFK-DCSDRFVGLSPNSVDALL 88 (150)
Q Consensus 19 i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d--------~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~ 88 (150)
+.+||..+++-...-....... .+++ .-++..++.|+.+ ..+.+||..... +....++. +..-.++.
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~ 145 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLG-EALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY--VVYGHTVL 145 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEE-EETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEE
T ss_pred eEEecCCCCeEEECCCCCcchhceeEE-EECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC--cccceeEE
Confidence 7788888765322111111111 1122 2256666777632 458888875322 12222221 11111233
Q ss_pred ecCCCEEEEecC-C-----CcEEEEeccCCee--eeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 89 KLDEDRVITGSE-N-----GLISLVGILPNRI--IQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 89 ~~~~~~l~~~~~-d-----g~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
..++++++.|+. + ..+..||+.+.+- +..+..... -.+++ .-++++++.|+.+
T Consensus 146 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~-~~~~~iyv~GG~~ 206 (315)
T 4asc_A 146 SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS--LFGAT-VHDGRIIVAAGVT 206 (315)
T ss_dssp EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB--SCEEE-EETTEEEEEEEEC
T ss_pred EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh--ceEEE-EECCEEEEEeccC
Confidence 456777888876 2 3688899877642 222211111 11222 2366777777654
No 332
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=93.57 E-value=0.4 Score=34.53 Aligned_cols=55 Identities=13% Similarity=0.183 Sum_probs=38.6
Q ss_pred CeeecCcceEEEEcCC------------CeEEEEEcCCCeeeeeeccC-CCcEEEEEEEeCCCEEEee
Q 031924 1 MTFAADAMKLLGTSGD------------GTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCG 55 (150)
Q Consensus 1 i~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 55 (150)
|+|+|.|+++++...+ +.+.+.+..+++....+... ..+++.++|+||++.|++.
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4688889877776432 35666677777665544443 5689999999998877654
No 333
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.48 E-value=1.1 Score=30.04 Aligned_cols=113 Identities=12% Similarity=0.111 Sum_probs=67.9
Q ss_pred eecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc--
Q 031924 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS-- 80 (150)
Q Consensus 3 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-- 80 (150)
.+|..+.|+.-. ..++.+||+++.+.++...-. ++|.-=.|-.+.. |+-.+ +..++-|++.......+.|.- |
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR-~~~ 148 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDR-HSS 148 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEEC-CGG
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeec-chh
Confidence 367778887775 679999999999887766543 5677777765443 33332 358999998643344333332 2
Q ss_pred --ccceeEee-ecCCCEEEEec-------CCCcEEEEeccCCeeeeeccCC
Q 031924 81 --PNSVDALL-KLDEDRVITGS-------ENGLISLVGILPNRIIQPIAEH 121 (150)
Q Consensus 81 --~~~v~~~~-~~~~~~l~~~~-------~dg~i~~~d~~~~~~~~~~~~~ 121 (150)
...|.... +++.++++..+ -.|.+.+|..+.+ ..+.+.+|
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGh 198 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 198 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCS
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeee
Confidence 22333333 66667655433 2357788887543 33555455
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.08 E-value=1.1 Score=29.00 Aligned_cols=119 Identities=8% Similarity=-0.035 Sum_probs=56.1
Q ss_pred EEEEEcCCCeeeee--eccCCCcEEEEEEEeCCCEEEeecCC-------CeEEEEEccccc-ccccccccccccceeEee
Q 031924 19 LSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQS-------GTVLLYSWGYFK-DCSDRFVGLSPNSVDALL 88 (150)
Q Consensus 19 i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~ 88 (150)
+..||..+++-... +....... +++. -++..++.|+.+ ..+.+||..... .....++. ... -.++.
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~-~~~~~ 155 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLF-GLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI-KVY-GHNVI 155 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSC-EEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS-CEE-SCEEE
T ss_pred EEEEeCCCCcEEECCCCCcccccc-ceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC-ccc-ccEEE
Confidence 77888877653321 11111111 2222 256666777653 357778875321 11112221 111 11222
Q ss_pred ecCCCEEEEecC------CCcEEEEeccCCee--eeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 89 KLDEDRVITGSE------NGLISLVGILPNRI--IQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 89 ~~~~~~l~~~~~------dg~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
..++.+++.|+. ...+..||+.+.+- +..+..... -.+++. -++++++.|+.+
T Consensus 156 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~-~~~~iyv~GG~~ 216 (318)
T 2woz_A 156 SHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS--MFGVAI-HKGKIVIAGGVT 216 (318)
T ss_dssp EETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB--SCEEEE-ETTEEEEEEEEE
T ss_pred EECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc--cceEEE-ECCEEEEEcCcC
Confidence 456777777764 23588999977652 222211111 112222 356777777653
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.95 E-value=1.3 Score=29.23 Aligned_cols=83 Identities=8% Similarity=0.016 Sum_probs=37.6
Q ss_pred CeEEEEEccccc-ccccccccccccce-eEeeecCCCEEEEecC------CCcEEEEec--cCCe--eeeeccCCCCcce
Q 031924 59 GTVLLYSWGYFK-DCSDRFVGLSPNSV-DALLKLDEDRVITGSE------NGLISLVGI--LPNR--IIQPIAEHSEYPI 126 (150)
Q Consensus 59 ~~i~i~~~~~~~-~~~~~~~~~~~~~v-~~~~~~~~~~l~~~~~------dg~i~~~d~--~~~~--~~~~~~~~~~~~i 126 (150)
..+.+||..... .....++. .... .++...++++++.|+. ...+..+|+ .+.+ .+..+..... ..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~--~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~-~~ 244 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPW--YGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG-VA 244 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSS--CCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC-CB
T ss_pred ccEEEEeCCCCcEEECCCCCC--CCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc-cc
Confidence 478889875322 11222221 1111 2333456777777764 345777776 3333 1222211111 11
Q ss_pred eEEEEcCCccEEEecccc
Q 031924 127 ESLGIASVLCFINSGFLS 144 (150)
Q Consensus 127 ~~~~~~~~~~~l~s~~~~ 144 (150)
...+...++++++.|+.+
T Consensus 245 ~~~~~~~~~~iyv~GG~~ 262 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAG 262 (357)
T ss_dssp SCEEEEETTEEEEECCEE
T ss_pred cceEEEECCEEEEEcCcc
Confidence 222334466777777743
No 336
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.42 E-value=1.6 Score=29.18 Aligned_cols=110 Identities=6% Similarity=-0.102 Sum_probs=59.4
Q ss_pred eccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccc--cccc----ccccccceeEee-ecC----CCEEEEe--c
Q 031924 33 SEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC--SDRF----VGLSPNSVDALL-KLD----EDRVITG--S 99 (150)
Q Consensus 33 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~----~~~~~~~v~~~~-~~~----~~~l~~~--~ 99 (150)
+...-.....++|.|+|+.+++--..|.|++++... ++. +..+ .. .......++ +|+ +.+.++- .
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~-g~~~~v~~~~~v~~~-g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKT-GRKTELGEVPGVSPS-GEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTT-CCEEEEEECTTCCCB-TTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCC-CcEeeecccCceeec-CCCCceeeEeccccccCCEEEEEEecC
Confidence 333345678999999999777775589999987532 221 1111 11 233445555 553 4333332 2
Q ss_pred CCCcEEEEeccCC----------e-eeeeccCCCCcceeEEEEcCCccEEEecccc
Q 031924 100 ENGLISLVGILPN----------R-IIQPIAEHSEYPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 100 ~dg~i~~~d~~~~----------~-~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~~ 144 (150)
.++.|.-|....+ + .+..+.....-....++|.|||.+.++-+..
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~ 160 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES 160 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC
Confidence 3445555654331 1 1122221111014579999999987775543
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.28 E-value=2 Score=29.83 Aligned_cols=107 Identities=8% Similarity=-0.010 Sum_probs=55.6
Q ss_pred CCcEEEEEEEeCCCEEEeecCCCeEEEEEccccc-ccccccccc-----cccceeEee-ecC---CCEE-EEecC-----
Q 031924 37 EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK-DCSDRFVGL-----SPNSVDALL-KLD---EDRV-ITGSE----- 100 (150)
Q Consensus 37 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~-----~~~~v~~~~-~~~---~~~l-~~~~~----- 100 (150)
......++|.|+|+.+++-...+.|++++..... ..+..+... .......++ .|+ +..| ++-+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4456799999999977776544578888753111 111112110 123344555 653 4444 44332
Q ss_pred -------CCcEEEEeccCC-------e-eeeeccCCCCcceeEEEEcCCccEEEeccc
Q 031924 101 -------NGLISLVGILPN-------R-IIQPIAEHSEYPIESLGIASVLCFINSGFL 143 (150)
Q Consensus 101 -------dg~i~~~d~~~~-------~-~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~ 143 (150)
...|.-++.... + .+..+.....-....|+|.|||.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555554321 1 122222111112778999999998776554
No 338
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.23 E-value=1.8 Score=29.12 Aligned_cols=65 Identities=12% Similarity=0.097 Sum_probs=48.6
Q ss_pred eecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcc
Q 031924 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG 67 (150)
Q Consensus 3 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~ 67 (150)
.++.-..++.-..-|.+++||++++.++..-.-..+.+...+...+..-+++...+|.+.-..++
T Consensus 267 vs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 267 ISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred ecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 34445577777899999999999999887666556667666666665567777788988877764
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.02 E-value=2.7 Score=30.86 Aligned_cols=135 Identities=9% Similarity=0.040 Sum_probs=69.9
Q ss_pred CcceEEEEcCC----CeEEEEEcCCCeeeeee-c------cCCCcEEEEEEEe-CCCEEEeecCC------CeEEEEEcc
Q 031924 6 DAMKLLGTSGD----GTLSVCNLRKNTVQTRS-E------FSEEELTSVVLMK-NGRKVVCGSQS------GTVLLYSWG 67 (150)
Q Consensus 6 ~~~~l~~~~~d----~~i~i~d~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~i~~~~ 67 (150)
++..++.|+.+ +.+.+||..+++-...- . .....-.+++..+ ++..++.|+.+ ..+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 44555555532 46888998877543222 1 1111122333333 67777777643 357788875
Q ss_pred ccc-ccccccccccccceeEeee-cCCCEEEEecCCC--cEEEEeccCCeeeee-----ccCCCCcceeEEEEcCC-ccE
Q 031924 68 YFK-DCSDRFVGLSPNSVDALLK-LDEDRVITGSENG--LISLVGILPNRIIQP-----IAEHSEYPIESLGIASV-LCF 137 (150)
Q Consensus 68 ~~~-~~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~dg--~i~~~d~~~~~~~~~-----~~~~~~~~i~~~~~~~~-~~~ 137 (150)
... .....++. .... .+... .++.+++.|+.++ .+.+||+.+.+-... ...... ....+.+..+ +++
T Consensus 477 t~~W~~~~~~p~-~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~-~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 477 TREWSMIKSLSH-TRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSL-VSAGLEFDPVSKQG 553 (695)
T ss_dssp TTEEEECCCCSB-CCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCC-BSCEEEEETTTTEE
T ss_pred CCcEEECCCCCC-Cccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCccc-ceeEEEEeCCCCEE
Confidence 421 11122221 1111 12233 4788888888655 689999877652211 111111 1333555655 778
Q ss_pred EEeccc
Q 031924 138 INSGFL 143 (150)
Q Consensus 138 l~s~~~ 143 (150)
++.|+.
T Consensus 554 yv~GG~ 559 (695)
T 2zwa_A 554 IILGGG 559 (695)
T ss_dssp EEECCB
T ss_pred EEECCc
Confidence 887776
No 340
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=90.17 E-value=1.8 Score=31.22 Aligned_cols=55 Identities=11% Similarity=0.168 Sum_probs=37.6
Q ss_pred CeeecCcceEEEEcC------------CCeEEEEEcCCCeeeeeeccC-CCcEEEEEEEeCCCEEEee
Q 031924 1 MTFAADAMKLLGTSG------------DGTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCG 55 (150)
Q Consensus 1 i~~~~~~~~l~~~~~------------d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 55 (150)
|.|+++|.+.++... .+.+..++..+++....+... ...++.++|+||++.|++.
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 467788877775432 225677777777665544433 4578999999999888665
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.09 E-value=4.4 Score=29.80 Aligned_cols=137 Identities=11% Similarity=0.055 Sum_probs=67.4
Q ss_pred CcceEEEEcCC------CeEEEEEcCCCeeeee--eccCCCcEEEEEEEeCCCEEEeecCCC--eEEEEEccccc-cccc
Q 031924 6 DAMKLLGTSGD------GTLSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQSG--TVLLYSWGYFK-DCSD 74 (150)
Q Consensus 6 ~~~~l~~~~~d------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~i~~~~~~~-~~~~ 74 (150)
+++.++.|+.+ +.+.+||..+.+-... +.... .-.+++...++..++.|+.++ .+.+||..... ....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R-~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR-FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC-BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc-ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 55566666532 3577888887643221 11111 112233323778888887654 68889875432 1111
Q ss_pred c---cccccccceeEee-ecC-CCEEEEecC--C-----CcEEEEeccCCee-----eeeccC---CCCcceeEEEEcCC
Q 031924 75 R---FVGLSPNSVDALL-KLD-EDRVITGSE--N-----GLISLVGILPNRI-----IQPIAE---HSEYPIESLGIASV 134 (150)
Q Consensus 75 ~---~~~~~~~~v~~~~-~~~-~~~l~~~~~--d-----g~i~~~d~~~~~~-----~~~~~~---~~~~~i~~~~~~~~ 134 (150)
. .+. ......++. ..+ +.+++.|+. + ..+..||+.+..- ...+.. .... -.++....+
T Consensus 530 ~~g~~p~-~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~-~~~~~~~~~ 607 (695)
T 2zwa_A 530 PKDEFFQ-NSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRY-GSQIKYITP 607 (695)
T ss_dssp CSSGGGG-SCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCB-SCEEEEEET
T ss_pred CCCCCCC-cccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcc-cceEEEeCC
Confidence 1 221 111112222 333 667777775 2 3588899877651 122211 1111 122333344
Q ss_pred ccEEEeccccc
Q 031924 135 LCFINSGFLSL 145 (150)
Q Consensus 135 ~~~l~s~~~~~ 145 (150)
+++++.|+.+.
T Consensus 608 ~~iyv~GG~~~ 618 (695)
T 2zwa_A 608 RKLLIVGGTSP 618 (695)
T ss_dssp TEEEEECCBCS
T ss_pred CEEEEECCccC
Confidence 77777777643
No 342
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.75 E-value=3.9 Score=28.70 Aligned_cols=65 Identities=12% Similarity=0.097 Sum_probs=49.1
Q ss_pred eecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcc
Q 031924 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG 67 (150)
Q Consensus 3 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~ 67 (150)
.++.-..++.-..-|.+++||++++.++..-.-..+.+...+......-+++....|.|.--.++
T Consensus 266 vs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 266 ISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred ecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 45555677777899999999999999887666556667666666666667777788988777664
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.63 E-value=4.9 Score=30.85 Aligned_cols=35 Identities=9% Similarity=0.147 Sum_probs=27.7
Q ss_pred eeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeec
Q 031924 84 VDALL-KLDEDRVITGSENGLISLVGILPNRIIQPI 118 (150)
Q Consensus 84 v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 118 (150)
+.++. ..+..++++-+.|+++|+|++.+++++...
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 44444 556779999999999999999998876653
No 344
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=88.48 E-value=4 Score=27.16 Aligned_cols=56 Identities=5% Similarity=0.064 Sum_probs=35.7
Q ss_pred CCCEEEEecCCCcEEEEeccCCeeeee---ccCCCCcceeEEEEcCCccEEEe-ccccccc
Q 031924 91 DEDRVITGSENGLISLVGILPNRIIQP---IAEHSEYPIESLGIASVLCFINS-GFLSLNV 147 (150)
Q Consensus 91 ~~~~l~~~~~dg~i~~~d~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~s-~~~~~~v 147 (150)
+++++++....+.|...++..++.... +..... .+..+++.|||.++++ -..++.|
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQ-RIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCC-CEEEEEECTTSCEEEEECSTTEEE
T ss_pred CCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCC-ceeEEEECCCCcEEEEEeCCCCEE
Confidence 467777777778888888876543322 211122 5889999999987764 3334443
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=87.30 E-value=1.2 Score=34.68 Aligned_cols=30 Identities=27% Similarity=0.163 Sum_probs=25.3
Q ss_pred eecCcceEEEEcCCCeEEEEEcCCCeeeee
Q 031924 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTR 32 (150)
Q Consensus 3 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 32 (150)
..++.+++++-+.|+++|+|++.+++++..
T Consensus 245 ~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 245 FLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp EETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred ccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 345678999999999999999999987654
No 346
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.52 E-value=4.5 Score=31.63 Aligned_cols=30 Identities=10% Similarity=0.104 Sum_probs=25.6
Q ss_pred ecCCCEEEEecCCCcEEEEeccCCeeeeec
Q 031924 89 KLDEDRVITGSENGLISLVGILPNRIIQPI 118 (150)
Q Consensus 89 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 118 (150)
..+..++++-+.|+++|+|++.+++++.+.
T Consensus 246 ~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 246 LSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp ETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred cCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 456679999999999999999999877664
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.37 E-value=1.4 Score=33.69 Aligned_cols=30 Identities=27% Similarity=0.163 Sum_probs=25.0
Q ss_pred eecCcceEEEEcCCCeEEEEEcCCCeeeee
Q 031924 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTR 32 (150)
Q Consensus 3 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 32 (150)
..++..++++-+.|+++|+|++.+++++..
T Consensus 243 ~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 243 FLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp EETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 345677899999999999999999987654
No 348
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=85.25 E-value=7.9 Score=27.26 Aligned_cols=114 Identities=17% Similarity=0.131 Sum_probs=62.2
Q ss_pred ecCcceEEEEc-------CCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeC---CCEEEeecC---CCeEEEEEcccc-
Q 031924 4 AADAMKLLGTS-------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKN---GRKVVCGSQ---SGTVLLYSWGYF- 69 (150)
Q Consensus 4 ~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~---d~~i~i~~~~~~- 69 (150)
+++.++++..+ -.|.+.+|..+.+ ..+.+++|......+...-+ .+.|.-+.. .+++++-++...
T Consensus 159 d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~ 237 (494)
T 1bpo_A 159 DAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPP 237 (494)
T ss_dssp CTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCC
T ss_pred CCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCc
Confidence 45666555432 2367889998876 44455666544433322211 112222222 378888887532
Q ss_pred -cc------ccccc-c--cccccceeEeeecCCCEEEEecCCCcEEEEeccCCeeeeec
Q 031924 70 -KD------CSDRF-V--GLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPI 118 (150)
Q Consensus 70 -~~------~~~~~-~--~~~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 118 (150)
+. ....+ + ....-+|.--.++.-..+..-+.-|.+++||+.++.++..-
T Consensus 238 ~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 238 TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (494)
T ss_dssp TTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeee
Confidence 11 00101 1 00122232333667778888889999999999999876544
No 349
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=84.71 E-value=5.6 Score=32.36 Aligned_cols=104 Identities=10% Similarity=0.042 Sum_probs=62.2
Q ss_pred eecCcceEEEEcCCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccccccc--
Q 031924 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS-- 80 (150)
Q Consensus 3 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-- 80 (150)
.+|..+.|+.-. ..++.|||+++...++...- ..+|.-=.|..+.. |+-. .+..|..|++.....+.+.|.- |
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~-l~lV-T~~aVyHW~~~~~s~P~k~fdR-~~~ 147 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT-VALV-TDNAVYHWSMEGESQPVKMFDR-HSS 147 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCe-eEEE-cCCeEEEeccCCCCccHHHHhc-chh
Confidence 367777777764 67999999998776665544 34566667765443 3322 2358999998643344444432 3
Q ss_pred --ccceeEee-ecCCCEEEEec-------CCCcEEEEeccC
Q 031924 81 --PNSVDALL-KLDEDRVITGS-------ENGLISLVGILP 111 (150)
Q Consensus 81 --~~~v~~~~-~~~~~~l~~~~-------~dg~i~~~d~~~ 111 (150)
...|.... +++.++++..+ -.|.+.+|..+.
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er 188 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc
Confidence 22333333 66677665333 347888888753
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=84.18 E-value=15 Score=30.04 Aligned_cols=122 Identities=7% Similarity=0.036 Sum_probs=69.9
Q ss_pred CCCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccccceeEeeecCCCE
Q 031924 15 GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDR 94 (150)
Q Consensus 15 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 94 (150)
+..+|.|.|+..+..+.+.. -.--+.-.+|..+.++.- ...++.+||++.. ..++.+.- .+ .|..=...+.+.
T Consensus 46 ~~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALr-ag~~lQiFnl~~k-~klks~~~-~e-~VvfWkWis~~~ 118 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALK-AGKTLQIFNIEMK-SKMKAHTM-TD-DVTFWKWISLNT 118 (1630)
T ss_pred CCceEEEEECCCCCCccccc---ccchhhccCCCcceEEEe-cCCeEEEeehHHh-hhhccccc-CC-CceEEEecCCCe
Confidence 34478888887754331111 111233456766655554 3679999999643 33444333 22 333222555566
Q ss_pred EEEecCCCcEEEEeccC-CeeeeeccCCCC---cceeEEEEcCCccEEEecccc
Q 031924 95 VITGSENGLISLVGILP-NRIIQPIAEHSE---YPIESLGIASVLCFINSGFLS 144 (150)
Q Consensus 95 l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~---~~i~~~~~~~~~~~l~s~~~~ 144 (150)
|+-.+ +..|+-|++.. ..+.+.+..|.. ..|.....+++.++++..|.+
T Consensus 119 l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~ 171 (1630)
T 1xi4_A 119 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGIS 171 (1630)
T ss_pred eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeec
Confidence 65554 45899999964 234445544422 237777889999988866653
No 351
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.73 E-value=2.2 Score=31.61 Aligned_cols=30 Identities=13% Similarity=0.059 Sum_probs=24.6
Q ss_pred ecCcceEEEEcCCCeEEEEEcCCCeeeeee
Q 031924 4 AADAMKLLGTSGDGTLSVCNLRKNTVQTRS 33 (150)
Q Consensus 4 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 33 (150)
..+..++++-+.|.++|+|++++++++...
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 345678999999999999999999866443
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=82.83 E-value=3.2 Score=30.83 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=25.3
Q ss_pred ecCCCEEEEecCCCcEEEEeccCCeeeeec
Q 031924 89 KLDEDRVITGSENGLISLVGILPNRIIQPI 118 (150)
Q Consensus 89 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 118 (150)
..+..++++-+.|.++|+|++.+++++...
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 445789999999999999999998866654
No 353
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.06 E-value=21 Score=25.92 Aligned_cols=53 Identities=6% Similarity=-0.048 Sum_probs=34.8
Q ss_pred ecCCCEEEEecCC------------CcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEec
Q 031924 89 KLDEDRVITGSEN------------GLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 89 ~~~~~~l~~~~~d------------g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
.+.|++++.-..+ ..+.+.+..+++..+.+....+..++.++|+||++.|...
T Consensus 484 d~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 484 DKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 6777877654432 2355556666776555545444459999999999877653
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=74.12 E-value=20 Score=25.08 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=30.6
Q ss_pred CeeecCcc-eEEEEcCCCeEEEEEcCCCe---eeeeec---------cCCCcEEEEEEEeC
Q 031924 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNT---VQTRSE---------FSEEELTSVVLMKN 48 (150)
Q Consensus 1 i~~~~~~~-~l~~~~~d~~i~i~d~~~~~---~~~~~~---------~~~~~v~~~~~~~~ 48 (150)
|+|.|++. .++++...|.|++++..... .+..+. ..+..+..++++|+
T Consensus 19 ~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 19 ALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred EEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 57889986 45566688999999754321 111111 11456889999996
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=73.68 E-value=20 Score=25.02 Aligned_cols=29 Identities=10% Similarity=0.147 Sum_probs=22.3
Q ss_pred CcEEEEEEEeCCC-EEEeecCCCeEEEEEc
Q 031924 38 EELTSVVLMKNGR-KVVCGSQSGTVLLYSW 66 (150)
Q Consensus 38 ~~v~~~~~~~~~~-~l~~~~~d~~i~i~~~ 66 (150)
.....|+|.|+|. .++++...|.|++++.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeC
Confidence 4557999999986 4555567899999974
No 356
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=71.49 E-value=18 Score=24.12 Aligned_cols=65 Identities=8% Similarity=-0.032 Sum_probs=38.9
Q ss_pred CCEEEeecCCCeEEEEEccccccccccccccc-ccceeEee---ec-CCCEEEEe-cCCCcEEEEeccCCeee
Q 031924 49 GRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS-PNSVDALL---KL-DEDRVITG-SENGLISLVGILPNRII 115 (150)
Q Consensus 49 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~~~v~~~~---~~-~~~~l~~~-~~dg~i~~~d~~~~~~~ 115 (150)
+..++.++.||.|.-+|.. .++..-++.. . ..+..... .+ ++..++.. +.||.++.++..++...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~-tG~~~W~~~~-~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRR-NGHIIWSIEP-ENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEEETTSCEEEEETT-TTEEEEEECG-GGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CCEEEEEeCCCeEEEEECC-CCcEEEEecC-CccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 3467888899999999974 4566555543 2 11222211 11 22334343 68999999998776433
No 357
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=70.67 E-value=29 Score=25.60 Aligned_cols=104 Identities=12% Similarity=0.053 Sum_probs=52.8
Q ss_pred cCcceEEEEcCCCeEEEEEcCCCeeeeeecc-C--CCcEEEEEEEeCCCEEEeecCCCeEEEEEccccccccccc--ccc
Q 031924 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF-S--EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF--VGL 79 (150)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~--~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~ 79 (150)
+++++.+.++..+-|..+|..+++....... . ...+.++....+|..- .|+.+| +..|+.... ....+ .+.
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lW-igt~~G-l~~~~~~~~--~~~~~~~~gl 556 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLW-VGFHGG-VMRINPKDE--SQQSISFGSF 556 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEE-EEETTE-EEEECC--C--CCCBCCCCC-
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEE-EEecCc-eEEEecCCC--ceEEecccCC
Confidence 3455444333344577888877754432211 1 2356777766667644 455555 677776422 22222 121
Q ss_pred cccceeEeeecCCCEEEEecCCCcEEEEeccCCee
Q 031924 80 SPNSVDALLKLDEDRVITGSENGLISLVGILPNRI 114 (150)
Q Consensus 80 ~~~~v~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 114 (150)
....+.++...+|++.+ ++.+| +..+|..+.+.
T Consensus 557 ~~~~i~~i~~~~g~lWi-~t~~G-l~~~~~~~~~~ 589 (758)
T 3ott_A 557 SNNEILSMTCVKNSIWV-STTNG-LWIIDRKTMDA 589 (758)
T ss_dssp --CCEEEEEEETTEEEE-EESSC-EEEEETTTCCE
T ss_pred CccceEEEEECCCCEEE-ECCCC-eEEEcCCCcee
Confidence 23446666644555444 44555 66778766543
No 358
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=67.99 E-value=22 Score=23.13 Aligned_cols=99 Identities=6% Similarity=0.003 Sum_probs=54.1
Q ss_pred eeecCcceEEEEcC-CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCC--CeEEEEEccccccccccccc
Q 031924 2 TFAADAMKLLGTSG-DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS--GTVLLYSWGYFKDCSDRFVG 78 (150)
Q Consensus 2 ~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~i~~~~~~~~~~~~~~~ 78 (150)
+|+|+++.|+-.+. ..+|...++..+....... +... ..+.|++.+|+-...+ ..|..-++. +.....+..
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ld--G~~~~~Lt~ 224 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNIN--NPNPVVLTE 224 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSS--SCCCEECSC
T ss_pred EeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECC--CCCeEEEeC
Confidence 56788888876654 6788888887765433322 2222 2456888887654433 344444443 333333432
Q ss_pred ccccceeEeeecCCCEEEEec--CCCcEEEEecc
Q 031924 79 LSPNSVDALLKLDEDRVITGS--ENGLISLVGIL 110 (150)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~--~dg~i~~~d~~ 110 (150)
..+.. ..++++.|..+. ..+.|...++.
T Consensus 225 ---~~~~~-~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 225 ---ANIEH-YNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp ---SCEEE-EEEETTEEEEEECSSSCEEEEEETT
T ss_pred ---CCcce-EEECCCEEEEEECCCCcEEEEEECC
Confidence 22222 356666666542 23566666664
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=67.37 E-value=33 Score=24.97 Aligned_cols=39 Identities=5% Similarity=-0.032 Sum_probs=25.7
Q ss_pred cEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEec
Q 031924 103 LISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINSG 141 (150)
Q Consensus 103 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 141 (150)
.+..++..+++....+.......++.++|+||++.|...
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 566667666765554433222248999999999877654
No 360
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=51.31 E-value=63 Score=22.94 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=35.9
Q ss_pred eEEEEcCCCeEEEEEcC-CCe-------eeeeec--cCCCcEEEEEEEeCCCEEEeecCCCeEEE
Q 031924 9 KLLGTSGDGTLSVCNLR-KNT-------VQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (150)
Q Consensus 9 ~l~~~~~d~~i~i~d~~-~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 63 (150)
.++.|..+|.|.-.-+. .+. .+..+. ....+|..|.+++++.+|.+++.++.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 56677788877544332 211 122222 23568899999999999999998887665
No 361
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=44.69 E-value=90 Score=22.84 Aligned_cols=56 Identities=16% Similarity=0.059 Sum_probs=36.1
Q ss_pred eEEEEcCCCeEEEEEcCC-C----e-eeeeec--cCCCcEEEEEEEeCCCEEEeecCCCeEEEE
Q 031924 9 KLLGTSGDGTLSVCNLRK-N----T-VQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLY 64 (150)
Q Consensus 9 ~l~~~~~d~~i~i~d~~~-~----~-~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 64 (150)
.++.|..+|.|.-.-... + . .+..+. ....++..+.++++...|.+++.++.+++-
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 566677888876433322 2 1 122222 235678999999999999998888766663
No 362
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=41.96 E-value=1e+02 Score=22.76 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=63.6
Q ss_pred EEEEcCCCeEEEEEcCCCeeeeeec----cCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccc-----c
Q 031924 10 LLGTSGDGTLSVCNLRKNTVQTRSE----FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL-----S 80 (150)
Q Consensus 10 l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----~ 80 (150)
|..++.+ -+..||..+++...... .....+.++...++|... .++.+| +..|+.... + ...+... .
T Consensus 115 lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~G-l~~~~~~~~-~-~~~~~~~~~~~~~ 189 (758)
T 3ott_A 115 LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIY-VGTYNG-LCRYIPSNG-K-FEGIPLPVHSSQS 189 (758)
T ss_dssp EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEE-EEETTE-EEEEETTTT-E-EEEECCCCCTTCS
T ss_pred EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEE-EEeCCC-HhhCccCCC-c-eEEecCCCccccc
Confidence 3344444 57778877654332200 123457777776666644 455554 666775422 1 1111110 1
Q ss_pred ccceeEee-ecCCCEEEEecCCCcEEEEeccCCeeeeeccCCCCcceeEEEEcCCccEEEe
Q 031924 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLGIASVLCFINS 140 (150)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 140 (150)
...|.++. ..++..|-.|+. +-+..+|..+++.......... .|.++...++|.+.+.
T Consensus 190 ~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWig 248 (758)
T 3ott_A 190 NLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNN-SIKSLALDGNGDLLAG 248 (758)
T ss_dssp SCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEE-EEEEEEECTTCCEEEE
T ss_pred cceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCC-eEEEEEEcCCCCEEEE
Confidence 22366666 555665444553 4577788776553221111122 4788888877776543
No 363
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=38.72 E-value=68 Score=23.05 Aligned_cols=56 Identities=7% Similarity=-0.066 Sum_probs=35.2
Q ss_pred ceEEEEcCCCeEEEEEcCCC----eeeeee--ccCCCcEE-EEEEEeCCCEEEeecCCCeEEE
Q 031924 8 MKLLGTSGDGTLSVCNLRKN----TVQTRS--EFSEEELT-SVVLMKNGRKVVCGSQSGTVLL 63 (150)
Q Consensus 8 ~~l~~~~~d~~i~i~d~~~~----~~~~~~--~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~i 63 (150)
..++.|..+|.|.-..+..+ .....+ .....+|. .+.+++++.+|++++.++.+++
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45667778888765544322 112222 22245675 8889999999999887766655
No 364
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=36.95 E-value=1.3e+02 Score=22.43 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=35.7
Q ss_pred eEEEEcCCCeEE-EEEcCCCe-------eeee--eccCCCcEEEEEEEeCCCEEEeecCCCeEEE
Q 031924 9 KLLGTSGDGTLS-VCNLRKNT-------VQTR--SEFSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (150)
Q Consensus 9 ~l~~~~~d~~i~-i~d~~~~~-------~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 63 (150)
.++.|..+|+|. +.....+. .+.. +.....+|..|.+++++..|++++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 566777888875 33222211 1122 2234567899999999999999999887776
No 365
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=35.05 E-value=71 Score=22.94 Aligned_cols=53 Identities=9% Similarity=0.063 Sum_probs=32.2
Q ss_pred CEEEEecCCCcEEEEeccCC----eeeeeccCCC-Cccee-EEEEcCCccEEEeccccc
Q 031924 93 DRVITGSENGLISLVGILPN----RIIQPIAEHS-EYPIE-SLGIASVLCFINSGFLSL 145 (150)
Q Consensus 93 ~~l~~~~~dg~i~~~d~~~~----~~~~~~~~~~-~~~i~-~~~~~~~~~~l~s~~~~~ 145 (150)
..+..|+.+|.|+-..+... ..+..+.... +.+|. .|.+++++.+|..++...
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~ 472 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQ 472 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccc
Confidence 35677888897765544322 1233332222 33685 899999888877766543
No 366
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=32.45 E-value=1.6e+02 Score=22.07 Aligned_cols=67 Identities=9% Similarity=0.091 Sum_probs=38.4
Q ss_pred eecCcceEEEE-----cCCCeEEEEEcCCCeeeee-ec-cCCC------cEEEEEEEeCCCEEEee----------cCCC
Q 031924 3 FAADAMKLLGT-----SGDGTLSVCNLRKNTVQTR-SE-FSEE------ELTSVVLMKNGRKVVCG----------SQSG 59 (150)
Q Consensus 3 ~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~----------~~d~ 59 (150)
++|++++++.+ +.-..++++|+++++.+.. +. .... ....++|..+...+++. +...
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~ 216 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPN 216 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBC
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCC
Confidence 67888877653 2334689999999976631 11 0001 11345787555555542 1235
Q ss_pred eEEEEEcccc
Q 031924 60 TVLLYSWGYF 69 (150)
Q Consensus 60 ~i~i~~~~~~ 69 (150)
+++.|.+.+.
T Consensus 217 ~v~~~~~Gt~ 226 (711)
T 4hvt_A 217 SLYIWKRGES 226 (711)
T ss_dssp EEEEEETTSC
T ss_pred EEEEEECCCC
Confidence 6888877543
No 367
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=31.87 E-value=1.4e+02 Score=21.25 Aligned_cols=52 Identities=10% Similarity=0.132 Sum_probs=31.0
Q ss_pred EEEEecCCCcEEEEecc-CC-------eeeeeccCC-CCcceeEEEEcCCccEEEeccccc
Q 031924 94 RVITGSENGLISLVGIL-PN-------RIIQPIAEH-SEYPIESLGIASVLCFINSGFLSL 145 (150)
Q Consensus 94 ~l~~~~~dg~i~~~d~~-~~-------~~~~~~~~~-~~~~i~~~~~~~~~~~l~s~~~~~ 145 (150)
.+..|+.+|.|+-.-.. .+ ..+..+... .+.||..|.++++..+|..++...
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAG 483 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCe
Confidence 56678888876544332 11 122233321 234799999999988877766544
No 368
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=29.11 E-value=1.8e+02 Score=21.65 Aligned_cols=55 Identities=22% Similarity=0.253 Sum_probs=36.2
Q ss_pred eEEEEcCCCeEEEE-EcCCCee-eeee--ccCCCcEEEEEEEeCC--CEEEeecCCCeEEE
Q 031924 9 KLLGTSGDGTLSVC-NLRKNTV-QTRS--EFSEEELTSVVLMKNG--RKVVCGSQSGTVLL 63 (150)
Q Consensus 9 ~l~~~~~d~~i~i~-d~~~~~~-~~~~--~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i 63 (150)
.++.|..+|.|.-. ....+.. +..+ .....+|..|.++++. ..|++++.++.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 67778888887543 4333322 2222 2234678899999887 89999988876665
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=23.44 E-value=1.7e+02 Score=19.40 Aligned_cols=102 Identities=19% Similarity=0.226 Sum_probs=64.4
Q ss_pred CcceEEEEcCCCeEEEEEcCCCe-------eeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcc--cccccc---
Q 031924 6 DAMKLLGTSGDGTLSVCNLRKNT-------VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG--YFKDCS--- 73 (150)
Q Consensus 6 ~~~~l~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~--~~~~~~--- 73 (150)
+...++..+.+|.++...+...+ ....+. ..+.+..+........++..+.+|.+..+... .-...-
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lk-e~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLR-DNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCC-TTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEEC-CCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 46688888899999988765421 112222 24566666666667788888899998888764 211111
Q ss_pred -----cccccccccceeEee-ecCCCEEEEecCCCcEEEEecc
Q 031924 74 -----DRFVGLSPNSVDALL-KLDEDRVITGSENGLISLVGIL 110 (150)
Q Consensus 74 -----~~~~~~~~~~v~~~~-~~~~~~l~~~~~dg~i~~~d~~ 110 (150)
-.+. ..+.|..+. ..++..++..+..|.++.-.+.
T Consensus 187 ~Gv~~i~L~--~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 187 SGVQGMRFN--IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp BCEESSCCC--TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCeeeecCC--CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 1121 234455555 3445678888899999888754
No 370
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=21.69 E-value=1.6e+02 Score=18.71 Aligned_cols=87 Identities=11% Similarity=0.018 Sum_probs=43.0
Q ss_pred CCeEEEEEcCCCeeeeeeccCCCcEEEEEEEeCCCEEEeecCCCeEEEEEcccccccccccccccccceeEeeecCCCEE
Q 031924 16 DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRV 95 (150)
Q Consensus 16 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l 95 (150)
||.|..|-....-.+..-......+..++...... ++. . ||.+..|-....++.-.... -...|..+..-.. ..
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~P~~--~~~~v~~ia~G~~-hs 114 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTVPAE--ARSGVDAIAAGAW-AS 114 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCCCGG--GSSSEEEEEEETT-EE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCCCcc--cCCCeEEEECcCC-EE
Confidence 78888887554221111111123455555543332 223 4 89998887544433221111 1234555543332 33
Q ss_pred EEecCCCcEEEEec
Q 031924 96 ITGSENGLISLVGI 109 (150)
Q Consensus 96 ~~~~~dg~i~~~d~ 109 (150)
+.-. ||.|+.|-.
T Consensus 115 ~al~-~G~v~~wG~ 127 (282)
T 3qhy_B 115 YALK-DGKVIAWGD 127 (282)
T ss_dssp EEEE-TTEEEEEEC
T ss_pred EEEe-CCeEEEecC
Confidence 3334 899999954
Done!