BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031927
MEATSLRSSLVFDSLFSSKSPKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLR
KRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVV
AMSVPASTFMVILRLLEVANGVLSAINSSC

High Scoring Gene Products

Symbol, full name Information P value
AT2G01300 protein from Arabidopsis thaliana 4.4e-29
AT1G15010 protein from Arabidopsis thaliana 5.2e-26

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031927
        (150 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2038816 - symbol:AT2G01300 "AT2G01300" species...   323  4.4e-29   1
TAIR|locus:2196204 - symbol:AT1G15010 "AT1G15010" species...   294  5.2e-26   1


>TAIR|locus:2038816 [details] [associations]
            symbol:AT2G01300 "AT2G01300" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002685 EMBL:AC006200 ProtClustDB:CLSN2683519
            EMBL:AY065356 EMBL:AY117184 EMBL:AY600542 EMBL:AY924734
            IPI:IPI00548445 PIR:A84423 RefSeq:NP_178239.1 UniGene:At.28520
            EnsemblPlants:AT2G01300.1 GeneID:814658 KEGG:ath:AT2G01300
            TAIR:At2g01300 InParanoid:Q9ZU37 OMA:ISPLRFH PhylomeDB:Q9ZU37
            ArrayExpress:Q9ZU37 Genevestigator:Q9ZU37 Uniprot:Q9ZU37
        Length = 156

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 63/129 (48%), Positives = 94/129 (72%)

Query:    21 PKRNFGSVRRAGAIVSAAGRDSCHWNYRGQLVDENMIVLRKRIHEMKVMERNYEPPAEWM 80
             PK+   ++R + A  +++G+D  H+   G+LVDENMIVLRKRIHEMK++ERNYEPP+ WM
Sbjct:    29 PKKKKMTMRVSAA--ASSGKD--HYYGGGRLVDENMIVLRKRIHEMKMVERNYEPPSHWM 84

Query:    81 EWEKQYYACYDEFICKLVGFLQTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVAN 140
             +WEK++Y  YD  IC  VG LQ+ LMNSRP+ A+  L  + +SVP S+ ++  RL+++ +
Sbjct:    85 DWEKRFYNSYDSVICDSVGLLQSFLMNSRPTVAIATLLFLLVSVPVSSTVIAFRLIDLLH 144

Query:   141 GVLSAINSS 149
              +L+A  S+
Sbjct:   145 WLLAAATSA 153


>TAIR|locus:2196204 [details] [associations]
            symbol:AT1G15010 "AT1G15010" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0050832 "defense response to
            fungus" evidence=IEP] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0050832 EMBL:AY086396 EMBL:BT006189 EMBL:AK229029
            IPI:IPI00538825 RefSeq:NP_563962.1 UniGene:At.17008
            EnsemblPlants:AT1G15010.1 GeneID:838066 KEGG:ath:AT1G15010
            TAIR:At1g15010 eggNOG:NOG321536 HOGENOM:HOG000237447
            InParanoid:Q8LCU9 OMA:RTVDENM PhylomeDB:Q8LCU9
            ProtClustDB:CLSN2683519 Genevestigator:Q8LCU9 Uniprot:Q8LCU9
        Length = 142

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 56/106 (52%), Positives = 77/106 (72%)

Query:    43 CHWNYRG-QLVDENMIVLRKRIHEMKVMERNYEPPAEWMEWEKQYYACYDEFICKLVGFL 101
             C   YRG + VDENM+VLRKRIHEMK++ERN+EPP+ WM+WEK++Y  YD  IC  +  L
Sbjct:    35 CADYYRGGRTVDENMVVLRKRIHEMKMVERNFEPPSHWMQWEKRFYCNYDATICDALTLL 94

Query:   102 QTQLMNSRPSFALGMLAVVAMSVPASTFMVILRLLEVANGVLSAIN 147
             QT LMNSRPS A G   ++ +SVP S+ +   R+L++A  +L A++
Sbjct:    95 QTFLMNSRPSVAFGTCLLLLVSVPVSSAVFAFRILDLALWLLDAVH 140


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.132   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      150       150   0.00087  104 3  11 22  0.41    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  151 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.30u 0.09s 13.39t   Elapsed:  00:00:00
  Total cpu time:  13.30u 0.09s 13.39t   Elapsed:  00:00:00
  Start:  Fri May 10 07:15:50 2013   End:  Fri May 10 07:15:50 2013

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