BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031931
(150 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 6/152 (3%)
Query: 5 GTIEYISDLL--SSVKKKKKKKQMQTVALKVRMDCDGCARKMKGVLSSVKGAKSVDVDLK 62
G ++++S++ S K KK+KQ+QTV +KV+MDC+GC RK++ + +KG SV ++ K
Sbjct: 2 GVLDHVSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPK 61
Query: 63 QQKVTVTGFVEPKKVLA-AAKATKKKVEIWPYVPYNIVSNPYVSQAYDKKAPPNHVRAI- 120
KVTV G+V+P KV+A + T KKVE+WPYVPY++V++PY + YDKKAP +VR +
Sbjct: 62 AHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRVD 121
Query: 121 -PATATVTE-STMDDRYTNMFSDENPNACSIM 150
P + + S+ + RYT FSDENP AC +M
Sbjct: 122 DPGVSQLARASSTEVRYTTAFSDENPAACVVM 153
>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=CCS1 PE=3 SV=2
Length = 250
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 29 VALKVRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKKKV 88
+ V M+C C + L S+ G D+DLK VT G V P +++ A ++T K
Sbjct: 7 IVFAVPMECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAIQSTGKDA 66
Query: 89 EI 90
I
Sbjct: 67 II 68
>sp|Q6BZU2|CCS1_YARLI Superoxide dismutase 1 copper chaperone OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CCS1 PE=3 SV=1
Length = 234
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 28 TVALKVRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKK 86
T V ++C+ C +K L++V+G +SVD L Q ++VTG P +++ A + K
Sbjct: 4 TTTFAVPLECESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQNIGK 62
>sp|Q9KPZ7|COPA_VIBCH Copper-exporting P-type ATPase A OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=copA PE=3
SV=1
Length = 915
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 12 DLLSSVKKKKKKKQMQTVALKVR-MDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTG 70
D +S + + QT++L ++ M C C ++ L SV+G +S V+L +Q V G
Sbjct: 157 DAENSSNTEATEASSQTLSLLIKGMTCASCVASVEKALLSVEGVQSAQVNLTEQSALVRG 216
Query: 71 -FVEPKKVLAAAKATKKKVEI 90
F P+ +L A +++ + EI
Sbjct: 217 IFANPQPLLNAIQSSGYQAEI 237
>sp|Q75DD6|CCS1_ASHGO Superoxide dismutase 1 copper chaperone OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=CCS1 PE=3 SV=1
Length = 238
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 33 VRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKK 86
V M C C ++ L +V G + V DL++Q V V G P ++ A AT +
Sbjct: 14 VPMHCGDCTGEISRALRAVPGVQEVTPDLERQLVAVRGIAPPSSIVQALAATGR 67
>sp|P40202|CCS1_YEAST Superoxide dismutase 1 copper chaperone OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CCS1 PE=1
SV=1
Length = 249
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 33 VRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVL 78
+ M C+ C +K L +V G S++ D++QQ ++V V P ++
Sbjct: 13 IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTII 58
>sp|Q6CIG2|CCS1_KLULA Superoxide dismutase 1 copper chaperone OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CCS1 PE=3 SV=1
Length = 245
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 33 VRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAK 82
V M C+ C ++ L V G K+V D+K + V G P ++ A K
Sbjct: 15 VEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALK 64
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium
discoideum GN=atox1 PE=3 SV=2
Length = 67
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 28 TVALKVRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVT 67
T + V M C GC++ + +LS + G ++ +DL+ +KV+
Sbjct: 2 TYSFFVDMTCGGCSKAVNAILSKIDGVSNIQIDLENKKVS 41
>sp|Q59998|ATZN_SYNY3 Zinc-transporting ATPase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=ziaA PE=1 SV=1
Length = 721
Score = 33.9 bits (76), Expect = 0.35, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 22 KKKQMQTVALKVRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKV 77
K +QMQ MDC C K++G L +KG V + ++TVT +PK+V
Sbjct: 8 KTQQMQVGG----MDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVT--YDPKQV 57
>sp|Q64430|ATP7A_MOUSE Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=3
Length = 1491
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 35 MDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKKKVE 89
M C+ C + ++GV+S G KS+ V L TG +E +L + + ++ +E
Sbjct: 386 MTCNSCVQSIEGVISKKPGVKSIHVSLANS----TGTIEFDPLLTSPETLREAIE 436
>sp|P70705|ATP7A_RAT Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1
SV=1
Length = 1492
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 27 QTVALKVR-MDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATK 85
Q V + + M C+ C + ++GV+S G KS+ V L TG +E +L + + +
Sbjct: 377 QEVVININGMTCNSCVQSIEGVISKKPGVKSIHVSLTNS----TGTIEYDPLLTSPEPLR 432
Query: 86 KKVE 89
+ +E
Sbjct: 433 EAIE 436
>sp|O00244|ATOX1_HUMAN Copper transport protein ATOX1 OS=Homo sapiens GN=ATOX1 PE=1 SV=1
Length = 68
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 31 LKVRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKKKV 88
V M C GCA + VL+ + G K D+DL +KV + +LA K T K V
Sbjct: 6 FSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTV 62
>sp|Q8ZCA7|COPA_YERPE Copper-exporting P-type ATPase A OS=Yersinia pestis GN=copA PE=3
SV=1
Length = 961
Score = 32.7 bits (73), Expect = 0.92, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 35 MDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKKKVEI 90
M C C K++ L V G + V+L ++ VTG + ++AA K EI
Sbjct: 235 MSCASCVSKVQNALQRVDGVQVARVNLAERSALVTGTQNNEALIAAVKNAGYGAEI 290
>sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium meliloti (strain 1021)
GN=actP2 PE=3 SV=1
Length = 827
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 35 MDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKK 86
M C C R+++ +++V G S +V+L ++ TV EP LA A +K
Sbjct: 24 MTCASCVRRVEKAITAVPGVASANVNLATERATVQFDGEP-DTLAVLHAIEK 74
>sp|Q9XT50|ATP7B_SHEEP Copper-transporting ATPase 2 OS=Ovis aries GN=ATP7B PE=2 SV=1
Length = 1505
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 33 VRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTV 68
V M C C + ++G +SS+KG S+ V L+Q V
Sbjct: 120 VGMTCQSCVKSIEGRVSSLKGIVSIKVSLEQSSAEV 155
>sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase OS=Sinorhizobium medicae
(strain WSM419) GN=actP PE=1 SV=1
Length = 827
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 35 MDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTV--TGFVEPKKVLAAAK 82
M C C R+++ +++V G S +V+L ++ TV G E VL A +
Sbjct: 24 MTCASCVRRVEKAIAAVPGVASANVNLATERATVQFNGVPETTSVLRAVE 73
>sp|Q9WU84|CCS_MOUSE Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs
PE=1 SV=1
Length = 274
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 29 VALKVRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKKK 87
+ V+M C C + L V G ++VDV L+ Q V V + ++V A ++T ++
Sbjct: 14 LEFAVQMSCQSCVDAVHKTLKGVAGVQNVDVQLENQMVLVQTTLPSQEVQALLESTGRQ 72
>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1
Length = 68
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 31 LKVRMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKKKV 88
V M C+GCA + VL+ + G + ++DL +KV + +LA T K V
Sbjct: 6 FSVDMTCEGCAEAVSRVLNKLGGVE-FNIDLPNKKVCIDSEHSSDTLLATLNKTGKAV 62
>sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3
Length = 1500
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 35 MDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKKKVE 89
M C+ C + ++GV+S G KS+ V L G VE +L + + + +E
Sbjct: 386 MTCNSCVQSIEGVISKKPGVKSIRVSLANSN----GTVEYDPLLTSPETLRGAIE 436
>sp|Q4L970|COPA_STAHJ Copper-exporting P-type ATPase A OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=copA PE=3 SV=1
Length = 795
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 6 TIEY------ISDLLSSVKKKKKKKQMQTVALKVR-MDCDGCARKMKGVLSSVKGAKSVD 58
TIEY I+D +++V+K + L + M C C+ +++ VL+ G K
Sbjct: 45 TIEYDTNDYAINDFVTTVQKLGYDVVIDKAELDITGMTCAACSNRIEKVLNKAPGVKDAT 104
Query: 59 VDLKQQKVTVT 69
V+L ++ VT
Sbjct: 105 VNLTTEQAMVT 115
>sp|Q6L3Z7|R1B14_SOLDE Putative late blight resistance protein homolog R1B-14 OS=Solanum
demissum GN=R1B-14 PE=3 SV=1
Length = 1317
Score = 30.0 bits (66), Expect = 5.7, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 48 LSSVKGAKSVDVDLKQQKVTVTGFVEPKKVLAAAKATKKK 87
L + G KSV D+ ++KVTVTG ++ +V +K+
Sbjct: 1275 LVPLPGVKSVRFDMDEKKVTVTGVMDANEVQLVVSKLRKR 1314
>sp|P04129|MERP_SHIFL Mercuric transport protein periplasmic component OS=Shigella
flexneri GN=merP PE=1 SV=1
Length = 91
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 27 QTVALKV-RMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVT 69
QTV L V M C C +K LS V+G VDV ++++ VT
Sbjct: 22 QTVTLAVPGMTCAACPITVKKALSKVEGVSKVDVGFEKREAVVT 65
>sp|Q64535|ATP7B_RAT Copper-transporting ATPase 2 OS=Rattus norvegicus GN=Atp7b PE=2
SV=1
Length = 1451
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 35 MDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTV 68
M C C + ++ +SS+KG S+ V L+Q TV
Sbjct: 66 MTCHSCVKSIEDRISSLKGIVSIKVSLEQGSATV 99
>sp|Q09794|PYR1_SCHPO Protein ura1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ura1 PE=1 SV=1
Length = 2244
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 69 TGFVEPKK-VLAAAKATKKKVEIWPYVP------YNIVSNPYVSQAY-DKKAPPNHVRAI 120
TGF PKK +L + + K+K E+ PYV YNI + S + + P ++ +
Sbjct: 1388 TGFRLPKKNILISIGSYKEKAELLPYVKKLYENNYNIFATAGTSDYFMESGVPCKYLADL 1447
Query: 121 PATATVTESTMDDRYTNMFSD 141
PA E ++ N D
Sbjct: 1448 PAEEANNEYSLSAHLANNMID 1468
>sp|P04131|MERP_PSEAI Mercuric transport protein periplasmic component OS=Pseudomonas
aeruginosa GN=merP PE=4 SV=1
Length = 91
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 27 QTVALKV-RMDCDGCARKMKGVLSSVKGAKSVDVDLKQQKVTVT 69
QTV L V M C C +K +S V+G VDV + ++ VT
Sbjct: 22 QTVTLSVPGMTCSACPITVKKAISEVEGVSKVDVTFETRQAVVT 65
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.126 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,266,466
Number of Sequences: 539616
Number of extensions: 1756809
Number of successful extensions: 4489
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 4447
Number of HSP's gapped (non-prelim): 64
length of query: 150
length of database: 191,569,459
effective HSP length: 107
effective length of query: 43
effective length of database: 133,830,547
effective search space: 5754713521
effective search space used: 5754713521
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)