Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>031932
MTISNLLHSPQTPLTLLHKPHNHHTRSSFLKSPSSSSFFTLTNKVNHHQTITTKSKKSDS
ADYPDRLISAICYFYPFFDGIQYGKYVITQFTPIQLLIQPLIPAIKVFKSFPFNGFLVFL
TLYFVVVRNTNFSQVPRLPIVAEAADRQVL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031932
        (150 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2162167 - symbol:Tic20-V "AT5G55710" species:3...   224  7.1e-25   2
TAIR|locus:2043353 - symbol:Tic20-II "translocon at the i...    95  1.6e-07   2


>TAIR|locus:2162167 [details] [associations]
            symbol:Tic20-V "AT5G55710" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] GO:GO:0016021
            EMBL:CP002688 GO:GO:0015031 GO:GO:0009706 GO:GO:0009535
            EMBL:AB009050 UniGene:At.49179 UniGene:At.71092
            HOGENOM:HOG000012384 EMBL:BT001996 EMBL:BT006255 EMBL:AY087311
            IPI:IPI00526058 RefSeq:NP_200382.1 STRING:Q9FM67 PRIDE:Q9FM67
            EnsemblPlants:AT5G55710.1 GeneID:835665 KEGG:ath:AT5G55710
            TAIR:At5g55710 eggNOG:NOG07485 InParanoid:Q9FM67 OMA:HFIRFNT
            PhylomeDB:Q9FM67 ProtClustDB:CLSN2687000 Genevestigator:Q9FM67
            Uniprot:Q9FM67
        Length = 209

 Score = 224 (83.9 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
 Identities = 44/88 (50%), Positives = 53/88 (60%)

Query:    50 TITTKSKKSDSADYPDRLISAICYFYPFFDGIQYGKYVITQFTXXXXXXXXXXXAIKVFK 109
             T+  +SK  DS D  DR+ISA+CYFYPFFDGIQYGK++ITQ+            AI+ FK
Sbjct:    46 TLVLQSKGDDSVDASDRIISAVCYFYPFFDGIQYGKFIITQYQPFQILIQPLFPAIRAFK 105

Query:   110 SFPFNGXXXXXXXXXXXXRNTNFSQVPR 137
             SFPFNG            RN NFS+  R
Sbjct:   106 SFPFNGFLIFITLYFVVVRNPNFSRYVR 133

 Score = 74 (31.1 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
 Identities = 15/19 (78%), Positives = 16/19 (84%)

Query:   132 FSQVPRLPIVAEAADRQVL 150
             F   PRLP+VAEAADRQVL
Sbjct:   191 FGLTPRLPLVAEAADRQVL 209


>TAIR|locus:2043353 [details] [associations]
            symbol:Tic20-II "translocon at the inner envelope
            membrane of chloroplasts 20-II" species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009706
            "chloroplast inner membrane" evidence=IDA] [GO:0010207 "photosystem
            II assembly" evidence=RCA] GO:GO:0016021 GO:GO:0005739
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031 EMBL:AC005309
            GO:GO:0009706 EMBL:AY050346 EMBL:AY094045 IPI:IPI00538035
            PIR:B84920 RefSeq:NP_566112.1 UniGene:At.12945 IntAct:O82251
            STRING:O82251 PaxDb:O82251 PRIDE:O82251 EnsemblPlants:AT2G47840.1
            GeneID:819396 KEGG:ath:AT2G47840 TAIR:At2g47840 eggNOG:NOG286535
            HOGENOM:HOG000012384 InParanoid:O82251 OMA:PYASFVA PhylomeDB:O82251
            ProtClustDB:CLSN2688992 Genevestigator:O82251 Uniprot:O82251
        Length = 208

 Score = 95 (38.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 21/87 (24%), Positives = 41/87 (47%)

Query:    51 ITTKSKKSDSADYPDRLISAICYFYPFFDGIQYGKYVITQFTXXXXXXXXXXXAIKVFKS 110
             +TT++  + +    +R+IS   Y  PFF+ +QYG+++  Q+             + +++S
Sbjct:    46 LTTRASYTPTPA-TERVISIASYALPFFNSLQYGRFLFAQYPRLGLLFEPIFPILNLYRS 104

Query:   111 FPFNGXXXXXXXXXXXXRNTNFSQVPR 137
              P+              RNT+FS+  R
Sbjct:   105 VPYASFVAFFGLYLGVVRNTSFSRYVR 131

 Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query:   134 QVPRLPIVAEAADRQV 149
             + P +P VA+AA RQ+
Sbjct:   193 KTPYIPFVADAAGRQL 208


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      150       114   0.00091  102 3  11 22  0.43    30
                                                     29  0.44    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  531 (57 KB)
  Total size of DFA:  116 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.03u 0.16s 9.19t   Elapsed:  00:00:01
  Total cpu time:  9.03u 0.16s 9.19t   Elapsed:  00:00:01
  Start:  Fri May 10 07:22:36 2013   End:  Fri May 10 07:22:37 2013

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