Query 031932
Match_columns 150
No_of_seqs 102 out of 112
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 11:34:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031932.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031932hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e74e1 f.23.24.1 (E:1-32) Pet 21.9 24 0.0017 19.2 1.8 12 116-127 8-19 (32)
2 d1h9aa1 c.2.1.3 (A:1-181,A:413 5.9 56 0.0041 23.3 -0.0 13 17-29 146-158 (195)
3 d1qkia1 c.2.1.3 (A:12-199,A:43 5.2 65 0.0047 23.3 -0.1 13 17-29 158-170 (203)
4 d2gdta1 d.346.1.1 (A:2-116) Ns 4.2 63 0.0046 21.7 -0.8 13 74-86 76-88 (115)
5 d2pmra1 a.8.11.1 (A:3-77) Unch 4.0 2.3E+02 0.017 17.7 2.0 20 64-83 51-70 (75)
6 d1tf3a3 g.37.1.1 (A:71-101) Tr 3.3 69 0.005 17.2 -1.0 7 134-140 23-29 (31)
7 d2elca1 a.46.2.1 (A:1-52) Anth 2.9 2.9E+02 0.021 15.2 1.5 22 128-149 9-30 (52)
8 d2jdig1 c.49.2.1 (G:1-272) ATP 2.6 1.4E+02 0.01 21.1 -0.2 34 114-147 205-238 (272)
9 d2gfna2 a.121.1.1 (A:81-199) P 2.6 1.8E+02 0.013 19.5 0.4 18 113-130 42-59 (119)
10 d1s6la2 d.357.1.2 (A:81-212) A 2.3 2.5E+02 0.018 18.9 0.8 18 73-90 105-122 (132)
No 1
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=21.87 E-value=24 Score=19.23 Aligned_cols=12 Identities=33% Similarity=1.046 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHH
Q 031932 116 FLVFLTLYFVVV 127 (150)
Q Consensus 116 livFf~Lyl~VV 127 (150)
.++|++||+|+.
T Consensus 8 yivfialffgia 19 (32)
T d2e74e1 8 YIVFIALFFGIA 19 (32)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 377888888864
No 2
>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}
Probab=5.94 E-value=56 Score=23.30 Aligned_cols=13 Identities=15% Similarity=0.307 Sum_probs=10.4
Q ss_pred ccccCCCCccccc
Q 031932 17 LHKPHNHHTRSSF 29 (150)
Q Consensus 17 ~~kp~~~~~~s~~ 29 (150)
.-||+||+..|..
T Consensus 146 vEKPfG~Dl~SA~ 158 (195)
T d1h9aa1 146 IEKPFGTSYDTAA 158 (195)
T ss_dssp ECSCSCSSHHHHH
T ss_pred EeCCccCCHHHHH
Confidence 4699999987764
No 3
>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.23 E-value=65 Score=23.32 Aligned_cols=13 Identities=31% Similarity=0.370 Sum_probs=10.4
Q ss_pred ccccCCCCccccc
Q 031932 17 LHKPHNHHTRSSF 29 (150)
Q Consensus 17 ~~kp~~~~~~s~~ 29 (150)
.-||+||+..|..
T Consensus 158 vEKPfG~Dl~SA~ 170 (203)
T d1qkia1 158 VEKPFGRDLQSSD 170 (203)
T ss_dssp ESCCCCSCHHHHH
T ss_pred EecCCCCChHHHH
Confidence 4799999988764
No 4
>d2gdta1 d.346.1.1 (A:2-116) Nsp1 {SARS coronavirus [TaxId: 227859]}
Probab=4.20 E-value=63 Score=21.68 Aligned_cols=13 Identities=46% Similarity=0.823 Sum_probs=9.2
Q ss_pred hhhchhhhhhHHH
Q 031932 74 FYPFFDGIQYGKY 86 (150)
Q Consensus 74 lLPL~D~l~fG~~ 86 (150)
+..=+||+|||+.
T Consensus 76 lvaemdgiqygrs 88 (115)
T d2gdta1 76 LVAEMDGIQYGRS 88 (115)
T ss_dssp EEEESSCTTTTSS
T ss_pred hhhhhcccccccC
Confidence 4456788999863
No 5
>d2pmra1 a.8.11.1 (A:3-77) Uncharacterized protein MTH1690 {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=3.97 E-value=2.3e+02 Score=17.66 Aligned_cols=20 Identities=15% Similarity=0.220 Sum_probs=17.2
Q ss_pred hhHHHHHHHhhhhchhhhhh
Q 031932 64 PDRLISAICYFYPFFDGIQY 83 (150)
Q Consensus 64 ~dRilA~LpYlLPL~D~l~f 83 (150)
..+.++|+.|---|+|++.+
T Consensus 51 ~v~A~~~i~YA~g~lDAlr~ 70 (75)
T d2pmra1 51 HITSFGCITYAHGLLDSLRM 70 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999754
No 6
>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=3.32 E-value=69 Score=17.17 Aligned_cols=7 Identities=14% Similarity=0.154 Sum_probs=3.1
Q ss_pred CcchhhH
Q 031932 134 QVPRLPI 140 (150)
Q Consensus 134 ~FIRFN~ 140 (150)
||-|||-
T Consensus 23 hfnrfhn 29 (31)
T d1tf3a3 23 HFNRFHN 29 (31)
T ss_dssp HHHHHTT
T ss_pred HHhhhcc
Confidence 4444443
No 7
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]}
Probab=2.87 E-value=2.9e+02 Score=15.20 Aligned_cols=22 Identities=5% Similarity=0.037 Sum_probs=12.9
Q ss_pred hCCCCCCcchhhHhHhhhhhcc
Q 031932 128 RNTNFSQVPRLPIVAEAADRQV 149 (150)
Q Consensus 128 RN~~is~FIRFN~mQAi~~~~~ 149 (150)
.+++.++===..+|++|+++.+
T Consensus 9 ~g~~Lt~~ea~~~~~~im~G~~ 30 (52)
T d2elca1 9 LGEVLEEEEAYEVMRALMAGEV 30 (52)
T ss_dssp TTCCCCHHHHHHHHHHHHTTCS
T ss_pred cCCCCCHHHHHHHHHHHHcCCC
Confidence 3444444444567888887764
No 8
>d2jdig1 c.49.2.1 (G:1-272) ATP synthase (F1-ATPase), gamma subunit {Cow (Bos taurus) [TaxId: 9913]}
Probab=2.65 E-value=1.4e+02 Score=21.06 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCcchhhHhHhhhhh
Q 031932 114 NGFLVFLTLYFVVVRNTNFSQVPRLPIVAEAADR 147 (150)
Q Consensus 114 ~~livFf~Lyl~VVRN~~is~FIRFN~mQAi~~~ 147 (150)
...-++-.+|-+++-+.---|--|-+|||+.-|.
T Consensus 205 ~~~yl~~~ly~a~~es~aSE~aaRm~AM~~At~N 238 (272)
T d2jdig1 205 QEYSLANIIYYSLKESTTSEQSARMTAMDNASKN 238 (272)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445666788888877777889999999998774
No 9
>d2gfna2 a.121.1.1 (A:81-199) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=2.58 E-value=1.8e+02 Score=19.49 Aligned_cols=18 Identities=28% Similarity=0.320 Sum_probs=12.9
Q ss_pred hhHHHHHHHHHHHHHhCC
Q 031932 113 FNGFLVFLTLYFVVVRNT 130 (150)
Q Consensus 113 F~~livFf~Lyl~VVRN~ 130 (150)
-+-...|.+=+=+|||..
T Consensus 42 r~eia~flarwr~vvr~~ 59 (119)
T d2gfna2 42 RGEIAAFLARWRGVVRES 59 (119)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455677888888888753
No 10
>d1s6la2 d.357.1.2 (A:81-212) Alkylmercury lyase MerB {Escherichia coli [TaxId: 562]}
Probab=2.31 E-value=2.5e+02 Score=18.88 Aligned_cols=18 Identities=6% Similarity=0.095 Sum_probs=15.1
Q ss_pred hhhhchhhhhhHHHHHhh
Q 031932 73 YFYPFFDGIQYGKYVITQ 90 (150)
Q Consensus 73 YlLPL~D~l~fG~~l~~q 90 (150)
.++|+-|++..|+.++++
T Consensus 105 ~il~l~eA~~lg~~~~~~ 122 (132)
T d1s6la2 105 AIVSVHEAFGLGQEFNRH 122 (132)
T ss_dssp EEEEHHHHHHHHHHHHHH
T ss_pred ceEeHHHHHHHHHHHHHH
Confidence 359999999999988764
Done!