BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031936
(150 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255536841|ref|XP_002509487.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus
communis]
gi|223549386|gb|EEF50874.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus
communis]
Length = 492
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 89/133 (66%), Gaps = 18/133 (13%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+V+K F + QDIKRET VLTDEG+KYA EGS E+QLFLAVP E SI KDELQKK
Sbjct: 35 NVLKSLFGFRFVDVQDIKRETWVLTDEGRKYADEGSPEVQLFLAVPPEGSISKDELQKKL 94
Query: 82 DSALFEIGCSQS-----VET------------NKFKDLLVRVQDGRAISKEDINGGLKAR 124
D A+F+IGCSQ+ VE +K K LL++++DG+ I K+ IN LKAR
Sbjct: 95 DPAVFKIGCSQAGKNKWVEMGKQISRKVQNVEDKVKHLLLQIRDGKEIDKDGIN-SLKAR 153
Query: 125 KLIVNQMCKGYSV 137
KLIV Q KGYSV
Sbjct: 154 KLIVLQTWKGYSV 166
>gi|22329256|ref|NP_195639.2| phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana]
gi|30316394|sp|Q9T034.3|SYFA_ARATH RecName: Full=Probable phenylalanine--tRNA ligase alpha subunit;
AltName: Full=Phenylalanyl-tRNA synthetase alpha
subunit; Short=PheRS
gi|20453179|gb|AAM19830.1| AT4g39280/T22F8_180 [Arabidopsis thaliana]
gi|25141225|gb|AAN73307.1| At4g39280/T22F8_180 [Arabidopsis thaliana]
gi|332661650|gb|AEE87050.1| phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana]
Length = 485
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 89/133 (66%), Gaps = 18/133 (13%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + QDIK+ET +LTDEGKKYAAEGS E+QLFLAVP E SI KDELQKK
Sbjct: 35 NVIKSLHGFRYIDVQDIKKETWILTDEGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKL 94
Query: 82 DSALFEIGCSQS-----VE-----TNKFKDL-------LVRVQDGRAISKEDINGGLKAR 124
A+F+IGCSQ+ VE + K KD+ L+++Q G+ KE IN LKAR
Sbjct: 95 APAVFKIGCSQAGKNKWVEMGKQVSRKVKDVEDKVKGQLLQIQQGKEFDKESIN-SLKAR 153
Query: 125 KLIVNQMCKGYSV 137
KLIV Q+ KGYSV
Sbjct: 154 KLIVPQIWKGYSV 166
>gi|334187316|ref|NP_001190964.1| phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana]
gi|332661651|gb|AEE87051.1| phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana]
Length = 485
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 89/133 (66%), Gaps = 18/133 (13%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + QDIK+ET +LTDEGKKYAAEGS E+QLFLAVP E SI KDELQKK
Sbjct: 35 NVIKSLHGFRYIDVQDIKKETWILTDEGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKL 94
Query: 82 DSALFEIGCSQS-----VE-----TNKFKDL-------LVRVQDGRAISKEDINGGLKAR 124
A+F+IGCSQ+ VE + K KD+ L+++Q G+ KE IN LKAR
Sbjct: 95 APAVFKIGCSQAGKNKWVEMGKQVSRKVKDVEDKVKGQLLQIQQGKEFDKESIN-SLKAR 153
Query: 125 KLIVNQMCKGYSV 137
KLIV Q+ KGYSV
Sbjct: 154 KLIVPQIWKGYSV 166
>gi|224105393|ref|XP_002313796.1| predicted protein [Populus trichocarpa]
gi|222850204|gb|EEE87751.1| predicted protein [Populus trichocarpa]
Length = 484
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 69/133 (51%), Positives = 87/133 (65%), Gaps = 18/133 (13%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + AQDIKRET VLT+EG+KYA +GS E+QLFLAVPAE SILK+ELQK
Sbjct: 35 NVIKSLHGFRYVDAQDIKRETDVLTEEGEKYAEQGSPEVQLFLAVPAEGSILKEELQKLV 94
Query: 82 DSALFEIGCSQSVET-----------------NKFKDLLVRVQDGRAISKEDINGGLKAR 124
D A+F+IGCSQ+ + ++ KDLL++++DG+ I D LKAR
Sbjct: 95 DPAVFKIGCSQAAKNKWVQMGNQISRKVQHVEDRIKDLLLQIRDGQEIDTGD-KKSLKAR 153
Query: 125 KLIVNQMCKGYSV 137
KLI Q KGYSV
Sbjct: 154 KLIAVQTWKGYSV 166
>gi|224077834|ref|XP_002305428.1| predicted protein [Populus trichocarpa]
gi|222848392|gb|EEE85939.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 69/133 (51%), Positives = 86/133 (64%), Gaps = 18/133 (13%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + AQDIKRET VLT+EG+KYA +GS E+QLFLAVP E SI K+ELQK
Sbjct: 35 NVIKSLHGFRYIEAQDIKRETLVLTEEGRKYAEKGSPEVQLFLAVPEEGSISKEELQKLL 94
Query: 82 DSALFEIGCSQSVET-----------------NKFKDLLVRVQDGRAISKEDINGGLKAR 124
D A+F+IGCSQ+ + ++ KDLL+R+QDG+ K+D N LKAR
Sbjct: 95 DPAVFKIGCSQAAKNKWVQMGNQISRKVQHVEDRVKDLLLRIQDGQEPGKDD-NNSLKAR 153
Query: 125 KLIVNQMCKGYSV 137
KL Q KGYSV
Sbjct: 154 KLTALQTWKGYSV 166
>gi|297802028|ref|XP_002868898.1| hypothetical protein ARALYDRAFT_912388 [Arabidopsis lyrata subsp.
lyrata]
gi|297314734|gb|EFH45157.1| hypothetical protein ARALYDRAFT_912388 [Arabidopsis lyrata subsp.
lyrata]
Length = 485
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/133 (54%), Positives = 88/133 (66%), Gaps = 18/133 (13%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + QDIK+ET VLTDEGKKYAAEGS E+QLFLAVP E SI KDELQKK
Sbjct: 35 NVIKSLHGFRYIDVQDIKKETWVLTDEGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKL 94
Query: 82 DSALFEIGCSQS-----VET------------NKFKDLLVRVQDGRAISKEDINGGLKAR 124
++F+IGCSQ+ VE +K K L+++Q+G+ K+ IN LKAR
Sbjct: 95 APSVFKIGCSQAGKNKWVEMGKQVSRKVKHVEDKVKGQLLQIQEGKESDKDSIN-SLKAR 153
Query: 125 KLIVNQMCKGYSV 137
KLIV Q+ KGYSV
Sbjct: 154 KLIVPQIWKGYSV 166
>gi|356538771|ref|XP_003537874.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
isoform 2 [Glycine max]
Length = 493
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 64/134 (47%), Positives = 83/134 (61%), Gaps = 20/134 (14%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + AQDIKRET VLTDEG+ YA GS E+QLFLA+P E I K+ELQKK
Sbjct: 35 NVIKSLHGFRYVDAQDIKRETWVLTDEGETYATVGSPEVQLFLAIPQE-GISKEELQKKL 93
Query: 82 DSALFEIGCSQSVET------------------NKFKDLLVRVQDGRAISKEDINGGLKA 123
D +LF+IGC+Q+ + +K KDLL+++Q G I ++I LK
Sbjct: 94 DPSLFKIGCAQAAKNKWVEMGKQLISRKVQHVDDKVKDLLLQIQQGLNIGSDEIK-ALKV 152
Query: 124 RKLIVNQMCKGYSV 137
RKLI+ Q KGYS+
Sbjct: 153 RKLIIPQTWKGYSL 166
>gi|255640993|gb|ACU20776.1| unknown [Glycine max]
Length = 349
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 83/134 (61%), Gaps = 20/134 (14%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + AQDIKRET VLTDEG+ YA GS E+QLFLA+P E I K+ELQKK
Sbjct: 35 NVIKSLHGFRYVDAQDIKRETWVLTDEGETYATVGSPEVQLFLAIPQE-GISKEELQKKL 93
Query: 82 DSALFEIGCSQSVET------------------NKFKDLLVRVQDGRAISKEDINGGLKA 123
D +LF+IGC+Q+ + +K KDLL+++Q G I ++I LK
Sbjct: 94 DPSLFKIGCAQAAKNKWVEMGKQLISRKVQHVDDKVKDLLLQIQQGLNIGSDEIK-ALKV 152
Query: 124 RKLIVNQMCKGYSV 137
RKLI+ Q KGYS+
Sbjct: 153 RKLIIPQTWKGYSL 166
>gi|356545225|ref|XP_003541045.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
[Glycine max]
Length = 488
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/134 (48%), Positives = 83/134 (61%), Gaps = 20/134 (14%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+V+K F + AQDIKRET VLTDEGK YA GS E+QLFLAVP E I K+ELQKK
Sbjct: 35 NVVKSLHGFRYVDAQDIKRETWVLTDEGKTYATVGSPEVQLFLAVPQE-GISKEELQKKL 93
Query: 82 DSALFEIGCSQSVET------------------NKFKDLLVRVQDGRAISKEDINGGLKA 123
D ++F+IGC+Q+ + +K KDLL+++Q G I ++I LK
Sbjct: 94 DPSVFKIGCAQAAKNKWVDMGKQLMSRKVQHVDDKVKDLLLQIQQGLNIGSDEIK-ALKV 152
Query: 124 RKLIVNQMCKGYSV 137
RKLIV Q KGYS+
Sbjct: 153 RKLIVPQTWKGYSL 166
>gi|356564085|ref|XP_003550287.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
[Glycine max]
Length = 493
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 62/133 (46%), Positives = 84/133 (63%), Gaps = 18/133 (13%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + AQDIKRET VLTDEGK Y++ GS E+QLF A+P E I K +LQKK
Sbjct: 35 NVIKSLHGFGYVDAQDIKRETWVLTDEGKTYSSVGSPEVQLFFAIPPEEGISKQDLQKKV 94
Query: 82 DSALFEIGCSQSVET-----------------NKFKDLLVRVQDGRAISKEDINGGLKAR 124
+ ++F+I C+Q+ +T +K KDLL+++Q G I+ ++I LKAR
Sbjct: 95 EPSVFKIACAQAAKTKWVEMGNKVSNFVQHVDDKVKDLLLQIQQGLDIASDEIK-ALKAR 153
Query: 125 KLIVNQMCKGYSV 137
KLIV Q KGYS+
Sbjct: 154 KLIVPQTWKGYSL 166
>gi|356538769|ref|XP_003537873.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
isoform 1 [Glycine max]
Length = 488
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 64/134 (47%), Positives = 83/134 (61%), Gaps = 20/134 (14%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + AQDIKRET VLTDEG+ YA GS E+QLFLA+P E I K+ELQKK
Sbjct: 35 NVIKSLHGFRYVDAQDIKRETWVLTDEGETYATVGSPEVQLFLAIPQE-GISKEELQKKL 93
Query: 82 DSALFEIGCSQSVET------------------NKFKDLLVRVQDGRAISKEDINGGLKA 123
D +LF+IGC+Q+ + +K KDLL+++Q G I ++I LK
Sbjct: 94 DPSLFKIGCAQAAKNKWVEMGKQLISRKVQHVDDKVKDLLLQIQQGLNIGSDEIK-ALKV 152
Query: 124 RKLIVNQMCKGYSV 137
RKLI+ Q KGYS+
Sbjct: 153 RKLIIPQTWKGYSL 166
>gi|359475324|ref|XP_003631655.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
[Vitis vinifera]
gi|297741458|emb|CBI32589.3| unnamed protein product [Vitis vinifera]
Length = 488
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/135 (49%), Positives = 86/135 (63%), Gaps = 22/135 (16%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + AQDIKRE VLTDEGK YAA GS E+QLFLAVP E I ++ELQ+K
Sbjct: 35 NVIKSLHGFRLVDAQDIKREKWVLTDEGKLYAAAGSPEVQLFLAVPPE-GISREELQRKV 93
Query: 82 DSALFEIGCSQSVETNKF-------------------KDLLVRVQDGRAISKEDINGGLK 122
D ++++IGCSQ+++ NK+ KDLL R+Q+ A+S+ DI+ LK
Sbjct: 94 DPSVYKIGCSQAIK-NKWLEIGKQQVSRKVQQVEDTAKDLLTRIQNEEALSQADID-ALK 151
Query: 123 ARKLIVNQMCKGYSV 137
RKLI Q KGYSV
Sbjct: 152 RRKLIALQTWKGYSV 166
>gi|7437805|pir||T08576 phenylalanine-tRNA ligase (EC 6.1.1.20) beta chain T22F8.180
[similarity] - Arabidopsis thaliana
gi|4914440|emb|CAB43643.1| phenylalanyl-trna synthetase-like protein [Arabidopsis thaliana]
gi|7270911|emb|CAB80591.1| phenylalanyl-trna synthetase-like protein [Arabidopsis thaliana]
Length = 428
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 29/152 (19%)
Query: 3 LMSSSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQL 62
+ S + +D +VIK F + QDIK+ET +LTDEGKKYAAEGS E+QL
Sbjct: 16 ITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTDEGKKYAAEGSPEVQL 75
Query: 63 FLAVPAECSILKDELQKKPDSALFEIGCSQS-----VE-----TNKFKDL-------LVR 105
FLAVP E SI KDELQKK A+F+IGCSQ+ VE + K KD+ L++
Sbjct: 76 FLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQVSRKVKDVEDKVKGQLLQ 135
Query: 106 VQDGRAISKEDINGGLKARKLIVNQMCKGYSV 137
+Q G+ IS L++ ++ KGYSV
Sbjct: 136 IQQGKLIS------------LLLLRIWKGYSV 155
>gi|449464912|ref|XP_004150173.1| PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like
[Cucumis sativus]
Length = 492
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 20/134 (14%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + A+DIK E VLT EG+ Y A GS E+QLFLA+P E I ++ELQKK
Sbjct: 35 NVIKSLNGFRYVDAEDIKMEKWVLTKEGETYTATGSPEMQLFLAIPPE-GIPREELQKKL 93
Query: 82 DSALFEIGCSQSVET------------------NKFKDLLVRVQDGRAISKEDINGGLKA 123
++F+IGC+Q+ + +K K+ L++++DG+ I ED+ LKA
Sbjct: 94 GPSIFKIGCAQAAKNKWVEMGKQMISRKVHHVEDKVKNSLLQIKDGKEIYDEDVK-ALKA 152
Query: 124 RKLIVNQMCKGYSV 137
RKLIV+Q KGYSV
Sbjct: 153 RKLIVSQTWKGYSV 166
>gi|357473243|ref|XP_003606906.1| Phenylalanyl-tRNA synthetase beta subunit [Medicago truncatula]
gi|355507961|gb|AES89103.1| Phenylalanyl-tRNA synthetase beta subunit [Medicago truncatula]
Length = 560
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 60/134 (44%), Positives = 79/134 (58%), Gaps = 20/134 (14%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+V+K F + A DIKRET VLTDEG YA GS E QL LA+P E I +DELQKK
Sbjct: 107 NVVKSLHGFRYVDAVDIKRETWVLTDEGNTYATLGSPEFQLILAIPPE-GISRDELQKKL 165
Query: 82 DSALFEIGCSQSVET------------------NKFKDLLVRVQDGRAISKEDINGGLKA 123
++F+I C+Q+ + ++ K+LL+++Q G+ I +DI LKA
Sbjct: 166 GPSVFKIACAQAAKNKWVEMGKQLISRKVQDVEDRVKNLLLQIQQGQGIGSDDIK-ALKA 224
Query: 124 RKLIVNQMCKGYSV 137
RKLIV Q KGYSV
Sbjct: 225 RKLIVPQTWKGYSV 238
>gi|449528065|ref|XP_004171027.1| PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like,
partial [Cucumis sativus]
Length = 220
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 20/134 (14%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKP 81
+VIK F + A+DIK E VLT EG+ Y A GS E+QLFLA+P E I ++ELQKK
Sbjct: 35 NVIKSLNGFRYVDAEDIKMEKWVLTKEGETYTATGSPEMQLFLAIPPE-GIPREELQKKL 93
Query: 82 DSALFEIGCSQSVET------------------NKFKDLLVRVQDGRAISKEDINGGLKA 123
++F+IGC+Q+ + +K K+ L++++DG+ I ED+ LKA
Sbjct: 94 GPSIFKIGCAQAAKNKWVEMGKQMISRKVHHVEDKVKNSLLQIKDGKEIYDEDVK-ALKA 152
Query: 124 RKLIVNQMCKGYSV 137
RKLIV+Q KGYSV
Sbjct: 153 RKLIVSQTWKGYSV 166
>gi|297825023|ref|XP_002880394.1| hypothetical protein ARALYDRAFT_320017 [Arabidopsis lyrata subsp.
lyrata]
gi|297326233|gb|EFH56653.1| hypothetical protein ARALYDRAFT_320017 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/140 (40%), Positives = 82/140 (58%), Gaps = 24/140 (17%)
Query: 22 SVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQK-- 79
+VIK+ F + Q+IKR + VLTDEGKKYAAEGS E+ FLAVPAE SI K+ELQK
Sbjct: 35 NVIKRLHAFGYVDCQNIKRVSSVLTDEGKKYAAEGSPEVHYFLAVPAEGSISKEELQKKL 94
Query: 80 -----KPDSALFEIGCSQSVET-----------------NKFKDLLVRVQDGRAISKEDI 117
K +++F IG +++ +K K+LL+++Q+G + +E +
Sbjct: 95 SPSDWKSKTSVFRIGSIYAIKNKWVEGGKQVSRKVQHVEDKVKNLLLQIQEGMELDEESL 154
Query: 118 NGGLKARKLIVNQMCKGYSV 137
N R+LI ++ KGYS+
Sbjct: 155 NYLKNTRRLIEEKVWKGYSI 174
>gi|302769624|ref|XP_002968231.1| hypothetical protein SELMODRAFT_231153 [Selaginella moellendorffii]
gi|300163875|gb|EFJ30485.1| hypothetical protein SELMODRAFT_231153 [Selaginella moellendorffii]
Length = 499
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 21/154 (13%)
Query: 3 LMSSSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQL 62
+ +S A + VD +L IK F + A+D++RE+ LT+EG Y+ GS E+Q+
Sbjct: 21 ISNSEAFARDLGVDHELLAGTIKSLHGFGFIEAKDVRRESWELTEEGLVYSRNGSPEVQV 80
Query: 63 FLAVPAECSILKDELQKKPDSALFEIGCSQSVETNKF------------------KDLLV 104
F AVPA I +++LQ+K D ++F IG +++ +NK+ K L+
Sbjct: 81 FDAVPAG-GISREDLQRKLDDSVFSIGFRKAM-SNKWLETKPLVSRKVLKVEDVVKQQLL 138
Query: 105 RVQDGRAISKEDINGGLKARKLIVNQMCKGYSVS 138
V+DG+ +S DI+ LK RKLIV ++ K YS++
Sbjct: 139 DVKDGKNLSAADID-ALKKRKLIVPKVWKAYSIT 171
>gi|302788758|ref|XP_002976148.1| hypothetical protein SELMODRAFT_443079 [Selaginella moellendorffii]
gi|300156424|gb|EFJ23053.1| hypothetical protein SELMODRAFT_443079 [Selaginella moellendorffii]
Length = 511
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 21/154 (13%)
Query: 3 LMSSSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQL 62
+ +S A + VD +L IK F + A+D++RE+ LT+EG Y+ GS E+Q+
Sbjct: 21 ISNSEAFARDLGVDHELLAGTIKSLHGFGFIEAKDVRRESWELTEEGLVYSRNGSPEVQV 80
Query: 63 FLAVPAECSILKDELQKKPDSALFEIGCSQSVETNKF------------------KDLLV 104
F AVPA I +++LQ+K D ++F IG +++ +NK+ K L+
Sbjct: 81 FDAVPAG-GISREDLQRKLDDSVFSIGFRKAM-SNKWLETKPLVSRKVLKVEDVVKQQLL 138
Query: 105 RVQDGRAISKEDINGGLKARKLIVNQMCKGYSVS 138
++DG+ +S DI+ LK RKLIV ++ K YS++
Sbjct: 139 DIKDGKNLSAADID-ALKKRKLIVPKVWKAYSIT 171
>gi|297799866|ref|XP_002867817.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313653|gb|EFH44076.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 479
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 14/130 (10%)
Query: 21 ESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKK 80
++VI++ F + AQDI R T VLT+EG KYAA+GS E+QLFLAVP E SI +L +
Sbjct: 34 KNVIRRLQGFRYIDAQDITRTTWVLTEEGNKYAAQGSPEVQLFLAVPEEGSISVKKLGES 93
Query: 81 PD---------SALFEIGCSQSVETNKFKD-----LLVRVQDGRAISKEDINGGLKARKL 126
D + E+G Q + D LL+++Q+G+ I ++ I+ + + L
Sbjct: 94 IDRFAWKYAKENKWLELGEKQVSRKVQHVDDIVQALLLQIQEGKEIDEDSIDFLKRRKNL 153
Query: 127 IVNQMCKGYS 136
I GYS
Sbjct: 154 IKQDKWNGYS 163
>gi|326503646|dbj|BAJ86329.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 501
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 21 ESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECS---ILKDEL 77
E VIK+ F + + DI +ET +LTDE K YAA GS E+QL A+P E + +L++ L
Sbjct: 42 EDVIKRLSAFRIVESADITKETWMLTDEAKGYAARGSPEVQLVAAIPPEGASKGVLRETL 101
Query: 78 QKKPDSAL----------FEIGCS----QSVETNK--FKDLLVRVQDGRAISKEDINGGL 121
D + FE G + VE K ++ L R+++G I+ E IN L
Sbjct: 102 GDVFDIGMKAAAKNKWIGFEKGNKDLVLRKVEDTKDELQEQLKRLENGEVIADEVIN-DL 160
Query: 122 KARKLIVNQMCKGYSV 137
K RKL+ + YS+
Sbjct: 161 KRRKLVTKEKSIWYSL 176
>gi|168062615|ref|XP_001783274.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665192|gb|EDQ51884.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 20/156 (12%)
Query: 1 MSLMSSSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEI 60
+++ +S S D L + V+K F + A+ +K+ VLT EGK Y GS E+
Sbjct: 17 LTISNSEEWASSAGFDHNLVKDVVKSLHGFGYVEAETVKKVRWVLTAEGKMYTMRGSPEV 76
Query: 61 QLFLAVPAECSILKDELQKKPDSALFEIGCSQSVET------------------NKFKDL 102
Q+F AVPAE I +L+ K D+ ++++G +++ ++ ++L
Sbjct: 77 QVFEAVPAE-GISAADLKGKLDALVYDVGFKTAMKNKWIQLAKPLIIKKVESVKDEVRNL 135
Query: 103 LVRVQDGRAISKEDINGGLKARKLIVNQMCKGYSVS 138
L +Q+G+ I IN LK R+LI + +S+S
Sbjct: 136 LTAIQEGKEIPDASIN-DLKKRQLIERRNETWFSLS 170
>gi|78708572|gb|ABB47547.1| phenylalanyl-tRNA synthetase alpha chain, putative, expressed
[Oryza sativa Japonica Group]
Length = 407
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 32/160 (20%)
Query: 6 SSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLA 65
S AS++ VT D E+VIK F + DI +ET VLTDE K Y A GS E QL A
Sbjct: 23 SYASSLRVTHDEL--EAVIKSLSAFRIVDTTDITKETWVLTDEAKGYVAGGSPEAQLVAA 80
Query: 66 VPAECSILKDELQKKPDSALFEIGCSQSVETNKF-------KDLLVR------------- 105
+P E + KD L++K S +F+IG ++ NK+ KDL++R
Sbjct: 81 IPPEGAS-KDVLREKLGS-VFDIGM-KTAAKNKWIGFEKGNKDLVLRKVNTIKDDLQEQL 137
Query: 106 --VQDGRAISKEDINGGLKARKLIVNQMCKGYSVSNALKK 143
++ G +S + I+ LK RKLI K S+ ALKK
Sbjct: 138 KSLESGEVLSDKVID-DLKRRKLI----TKEKSIWYALKK 172
>gi|115481904|ref|NP_001064545.1| Os10g0400800 [Oryza sativa Japonica Group]
gi|113639154|dbj|BAF26459.1| Os10g0400800, partial [Oryza sativa Japonica Group]
Length = 504
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 32/160 (20%)
Query: 6 SSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLA 65
S AS++ VT D E+VIK F + DI +ET VLTDE K Y A GS E QL A
Sbjct: 34 SYASSLRVTHDEL--EAVIKSLSAFRIVDTTDITKETWVLTDEAKGYVAGGSPEAQLVAA 91
Query: 66 VPAECSILKDELQKKPDSALFEIGCSQSVETNKF-------KDLLVR------------- 105
+P E + KD L++K S +F+IG ++ NK+ KDL++R
Sbjct: 92 IPPEGAS-KDVLREKLGS-VFDIGM-KTAAKNKWIGFEKGNKDLVLRKVNTIKDDLQEQL 148
Query: 106 --VQDGRAISKEDINGGLKARKLIVNQMCKGYSVSNALKK 143
++ G +S + I+ LK RKLI K S+ ALKK
Sbjct: 149 KSLESGEVLSDKVID-DLKRRKLI----TKEKSIWYALKK 183
>gi|78708570|gb|ABB47545.1| phenylalanyl-tRNA synthetase alpha chain, putative, expressed
[Oryza sativa Japonica Group]
gi|215686946|dbj|BAG90769.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184472|gb|EEC66899.1| hypothetical protein OsI_33484 [Oryza sativa Indica Group]
gi|222612784|gb|EEE50916.1| hypothetical protein OsJ_31442 [Oryza sativa Japonica Group]
Length = 493
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 32/160 (20%)
Query: 6 SSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLA 65
S AS++ VT D E+VIK F + DI +ET VLTDE K Y A GS E QL A
Sbjct: 23 SYASSLRVTHDEL--EAVIKSLSAFRIVDTTDITKETWVLTDEAKGYVAGGSPEAQLVAA 80
Query: 66 VPAECSILKDELQKKPDSALFEIGCSQSVETNKF-------KDLLVR------------- 105
+P E + KD L++K S +F+IG ++ NK+ KDL++R
Sbjct: 81 IPPEGAS-KDVLREKLGS-VFDIGM-KTAAKNKWIGFEKGNKDLVLRKVNTIKDDLQEQL 137
Query: 106 --VQDGRAISKEDINGGLKARKLIVNQMCKGYSVSNALKK 143
++ G +S + I+ LK RKLI K S+ ALKK
Sbjct: 138 KSLESGEVLSDKVID-DLKRRKLIT----KEKSIWYALKK 172
>gi|78708571|gb|ABB47546.1| phenylalanyl-tRNA synthetase alpha chain, putative, expressed
[Oryza sativa Japonica Group]
Length = 460
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 32/160 (20%)
Query: 6 SSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLA 65
S AS++ VT D E+VIK F + DI +ET VLTDE K Y A GS E QL A
Sbjct: 23 SYASSLRVTHDEL--EAVIKSLSAFRIVDTTDITKETWVLTDEAKGYVAGGSPEAQLVAA 80
Query: 66 VPAECSILKDELQKKPDSALFEIGCSQSVETNKF-------KDLLVR------------- 105
+P E + KD L++K S +F+IG ++ NK+ KDL++R
Sbjct: 81 IPPEGAS-KDVLREKLGS-VFDIGM-KTAAKNKWIGFEKGNKDLVLRKVNTIKDDLQEQL 137
Query: 106 --VQDGRAISKEDINGGLKARKLIVNQMCKGYSVSNALKK 143
++ G +S + I+ LK RKLI K S+ ALKK
Sbjct: 138 KSLESGEVLSDKVID-DLKRRKLIT----KEKSIWYALKK 172
>gi|357137986|ref|XP_003570579.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
[Brachypodium distachyon]
Length = 498
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 26/139 (18%)
Query: 21 ESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKK 80
E VIK F + + DI +ET VLTDE K YAA GS E+QL A+P E + K L++K
Sbjct: 42 EDVIKSLSAFRIVESADITKETWVLTDEAKGYAARGSPEVQLVAAIPPEGAS-KGALKEK 100
Query: 81 PDSALFEIGCSQSVETNKF-------KDLLVR---------------VQDGRAISKEDIN 118
+F+IG + + N++ KDL++R +++G ++ + I+
Sbjct: 101 LGD-VFDIGMKAAAK-NRWIGFEKGNKDLVLRKVEDIKDELQGQLKSLKNGEVVAAKTID 158
Query: 119 GGLKARKLIVNQMCKGYSV 137
LK RKLI + YS+
Sbjct: 159 -DLKRRKLITKEKSIWYSL 176
>gi|242063164|ref|XP_002452871.1| hypothetical protein SORBIDRAFT_04g034020 [Sorghum bicolor]
gi|241932702|gb|EES05847.1| hypothetical protein SORBIDRAFT_04g034020 [Sorghum bicolor]
Length = 498
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 24/138 (17%)
Query: 21 ESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKK 80
E VIK F + + DI +ET VLT+E K YAA+GS E QL A+P+E + KD L+ K
Sbjct: 42 EGVIKSLSAFRIVESTDIVKETWVLTEEAKGYAAKGSPEAQLVAAIPSEGAS-KDALKAK 100
Query: 81 PDSALFEIGCSQSVETNKF-------KDLLVRVQDG---------RAISK-----EDING 119
A F++G ++ NK+ KDL++R G R + K + +
Sbjct: 101 LGDA-FDVGM-KAAARNKWIGFEKGNKDLVLRKVGGVRDDFQEQFRRLGKGGVVPDKVID 158
Query: 120 GLKARKLIVNQMCKGYSV 137
LK RKLI + YS+
Sbjct: 159 DLKRRKLITKEKSIWYSL 176
>gi|212720922|ref|NP_001132642.1| uncharacterized protein LOC100194117 [Zea mays]
gi|195611738|gb|ACG27699.1| phenylalanyl-tRNA synthetase alpha chain [Zea mays]
Length = 498
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 26/139 (18%)
Query: 21 ESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKK 80
E VIK F + + DI +ET VLT+E K YAA+GS E QL A+ E + KD L+
Sbjct: 42 EGVIKSLSAFRIVDSTDIIKETWVLTEEAKGYAAKGSPEAQLVAAISPEGAS-KDALKAI 100
Query: 81 PDSALFEIGCSQSVETNKF-------KDL---------------LVRVQDGRAISKEDIN 118
A F++G ++ NK+ KDL L R+++G +S + I+
Sbjct: 101 LGDA-FDVGM-KAASRNKWIGFEKGNKDLVLRKVESVKDELQEQLRRLENGEVVSDKVID 158
Query: 119 GGLKARKLIVNQMCKGYSV 137
LK RKLI + YS+
Sbjct: 159 -DLKRRKLITKEKSIWYSL 176
>gi|219884461|gb|ACL52605.1| unknown [Zea mays]
gi|413939017|gb|AFW73568.1| phenylalanyl-tRNA synthetase alpha chain [Zea mays]
Length = 498
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 26/139 (18%)
Query: 21 ESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKK 80
E VIK F + + DI +ET VLT+E K YAA+GS E QL A+ E + KD L+
Sbjct: 42 EGVIKSLSAFRIVDSTDIIKETWVLTEEAKGYAAKGSPEAQLVAAISPEGAS-KDALKAI 100
Query: 81 PDSALFEIGCSQSVETNKF-------KDL---------------LVRVQDGRAISKEDIN 118
A F++G ++ NK+ KDL L R+++G +S + I+
Sbjct: 101 LGDA-FDVGM-KAAARNKWIGFEKGNKDLVLRKVESVKDELQEQLRRLENGEVVSDKVID 158
Query: 119 GGLKARKLIVNQMCKGYSV 137
LK RKLI + YS+
Sbjct: 159 -DLKRRKLITKEKSIWYSL 176
>gi|13940620|gb|AAK50422.1|AC021891_23 Putative phenylalanyl-tRNA synthetase alpha chain [Oryza sativa
Japonica Group]
Length = 523
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 10/77 (12%)
Query: 36 QDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSVE 95
QDI +ET VLTDE K Y A GS E QL A+P E + KD L++K S +F+IG ++
Sbjct: 81 QDITKETWVLTDEAKGYVAGGSPEAQLVAAIPPEGAS-KDVLREKLGS-VFDIGM-KTAA 137
Query: 96 TNKF-------KDLLVR 105
NK+ KDL++R
Sbjct: 138 KNKWIGFEKGNKDLVLR 154
>gi|326522404|dbj|BAK07664.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 23/138 (16%)
Query: 21 ESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKK 80
E VIK+ F + + D+ +E VLTDE K Y A GS E+Q A+P + + K LQ+
Sbjct: 78 EDVIKRLCAFRIVGSTDMTKEALVLTDEAKGYVARGSPEVQFVAAMPPKGAASKAALQEI 137
Query: 81 PDSALFEIGC--------------SQSVETNKFKDL-------LVRVQDGRAISKEDING 119
+F++G ++ + T + KD L R+++G + +
Sbjct: 138 L-GDVFDVGLKAAAKKQWIGFDKENEDLVTRRVKDTKDELQEQLKRLENGEVFD-DKVME 195
Query: 120 GLKARKLIVNQMCKGYSV 137
GLK RKLI + YS+
Sbjct: 196 GLKRRKLITKEKSIWYSL 213
>gi|384248810|gb|EIE22293.1| hypothetical protein COCSUDRAFT_16778 [Coccomyxa subellipsoidea
C-169]
Length = 494
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 21/127 (16%)
Query: 35 AQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKD------------------- 75
A++I VLT+E + Y GS E +LF A+P E ++KD
Sbjct: 52 AREIPHSRNVLTEEAQGYRDHGSPEAKLFAALPPEGILMKDLTANFGDKAFAPARKYGWV 111
Query: 76 ELQKKPDSALFEIGCSQSVETNKFKDLLVRVQDGRAISKEDINGGLKARKLIVNQMCKGY 135
+QK D + ++++E + ++LL ++ +G+A++++D+ L RKL+ + K Y
Sbjct: 112 GMQKVEDGQQVVVRETEAIE-DTTQNLLKQISEGQAVNRKDLE-ALGKRKLVKAETWKTY 169
Query: 136 SVSNALK 142
++ +K
Sbjct: 170 ALKKGVK 176
>gi|302849489|ref|XP_002956274.1| hypothetical protein VOLCADRAFT_77052 [Volvox carteri f.
nagariensis]
gi|300258386|gb|EFJ42623.1| hypothetical protein VOLCADRAFT_77052 [Volvox carteri f.
nagariensis]
Length = 501
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 23/131 (17%)
Query: 35 AQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSV 94
A+DI VLT+E + Y GS E Q+F +VPA I +L+ K ++G Q++
Sbjct: 50 AEDIDHFRYVLTEEAQGYLTAGSPEAQVFNSVPAGEGIAMTDLKAKVPGEAGDVGFKQAM 109
Query: 95 ET-----------------------NKFKDLLVRVQDGRAISKEDINGGLKARKLIVNQM 131
+ ++ + LL V GR I K + + K RKLI +
Sbjct: 110 QQRWLALDKSGSGEPRVVRKVDSIEDRTQQLLADVASGREIPKTEADNLAKKRKLIRPEQ 169
Query: 132 CKGYSVSNALK 142
K Y ++ K
Sbjct: 170 WKTYKLTKGPK 180
>gi|118372908|ref|XP_001019648.1| phenylalanyl-tRNA synthetase, alpha subunit family protein
[Tetrahymena thermophila]
gi|89301415|gb|EAR99403.1| phenylalanyl-tRNA synthetase, alpha subunit family protein
[Tetrahymena thermophila SB210]
Length = 512
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 22/124 (17%)
Query: 36 QDIKRETR-VLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSV 94
Q++K R VL EG G+ E ++F +PAE I K++L+ K D +F+ G +
Sbjct: 51 QEVKEIQRWVLLQEGLDNVTNGTPEFRVFQGIPAE-GISKNDLEAKFDPNVFKFGLQNGM 109
Query: 95 ETNKFKD------------------LLVRVQDGRAIS--KEDINGGLKARKLIVNQMCKG 134
+ FK LL R++ + K+D+ LK RK+I ++ K
Sbjct: 110 KKKWFKIKDGLIQKEVAEVVDEDAVLLKRIESNSNLEDIKKDVFDNLKKRKIISQEVIKY 169
Query: 135 YSVS 138
+ ++
Sbjct: 170 FKIN 173
>gi|348687231|gb|EGZ27045.1| hypothetical protein PHYSODRAFT_348851 [Phytophthora sojae]
Length = 504
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 27/139 (19%)
Query: 29 LFVGLPAQDIKRETR--VLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALF 86
L V D +R T VL DE +++ GS EIQ+F A+PA I + L+ +A
Sbjct: 49 LLVDAFVADAERSTSFYVLKDEARQFLERGSPEIQVFHAIPAADGIDRKALEAAVGAATL 108
Query: 87 EIG---CSQ---------------SVE--TNKFKDLLVRVQ--DG--RAISKEDINGGLK 122
++G C + +VE ++ ++L RV+ DG A+SK++ N LK
Sbjct: 109 KVGQGACMKNKWIRLDKADGKFYRNVEDVQDEVTEMLKRVEQADGALSAVSKDEAN-TLK 167
Query: 123 ARKLIVNQMCKGYSVSNAL 141
RKL + K Y+++ +
Sbjct: 168 RRKLAEVRTRKSYALTKGV 186
>gi|365843269|ref|ZP_09384211.1| ABC transporter, substrate-binding protein, family 5
[Flavonifractor plautii ATCC 29863]
gi|364572674|gb|EHM50213.1| ABC transporter, substrate-binding protein, family 5
[Flavonifractor plautii ATCC 29863]
Length = 564
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 16 DAQLNESV-IKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILK 74
D + +E V I F + G PA+ R++TD +YAA S E+ L + A + L
Sbjct: 243 DIKEDEYVDITAFDGYWGEPAKTKNIRVRIITDPQARYAALDSEEVMGVLDLGAMPAALG 302
Query: 75 DELQKKPDSALFEIGCSQSVETNKFKDLLVRVQDGRAISKEDINGGLKA---RKLIVNQM 131
DEL K A+ +V+T+ +++ +G S + + R+LIV+Q+
Sbjct: 303 DELLKDDRFAM-------AVQTSNITHIMLLKGEGTKFSDMRLRQAVSLAIDRQLIVDQL 355
Query: 132 CKGYSV 137
GY++
Sbjct: 356 WGGYAM 361
>gi|428180373|gb|EKX49240.1| hypothetical protein GUITHDRAFT_151485 [Guillardia theta CCMP2712]
Length = 500
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 24/123 (19%)
Query: 36 QDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSV- 94
+ + E LT+EG+ ++GS E Q+F V E S KDE++K AL ++G SQ +
Sbjct: 46 EAVDHEGWKLTEEGEACVSKGSPEAQVFALVKQEGSD-KDEIEKLA-GALAKVGLSQCMQ 103
Query: 95 ----------------ETNKFKDLLVR----VQDGRAISKEDINGGLKARKLIVNQMCKG 134
ET+K +DL+ + V++G K D++ LK RKLI K
Sbjct: 104 SKWLRVDKAQGGKIFKETDKIEDLVQKQLSDVKNGVFPPKADLD-KLKKRKLITAANYKT 162
Query: 135 YSV 137
Y++
Sbjct: 163 YNI 165
>gi|145350745|ref|XP_001419759.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579991|gb|ABO98052.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 494
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 3 LMSSSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSEIQL 62
+ +++++ VD Q V+K+ + A+ I+R LT EG++ EGS E +
Sbjct: 20 IADTASASARHGVDHQAVVGVVKRLTAANMVVARAIERSRTTLTAEGERCVDEGSPEARA 79
Query: 63 FLAVPAECSILKDELQKKPDSALFEIGCSQSVETN---KFKDLLVRVQDGRAISKEDING 119
F VP E I D + + ++G Q+++ N K RV+ ++D+
Sbjct: 80 FACVPEE-GIELDAFRTRAGPGAADVGFKQAMQRNWLAMVKGATPRVERRVETIEDDVRE 138
Query: 120 GLKA 123
L+A
Sbjct: 139 ALRA 142
>gi|159473623|ref|XP_001694933.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276312|gb|EDP02085.1| predicted protein [Chlamydomonas reinhardtii]
Length = 499
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 35 AQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSV 94
A+DI LT+E + Y GS E Q+F AV A+ I EL+ K ++G Q++
Sbjct: 50 AEDIDHFRYALTEESQTYLTAGSPEAQVFAAVGAD-GISLAELKVKVPGEAGDVGFKQAM 108
Query: 95 E----------------------TNKFKDLLVRVQDGRAISKEDINGGLKARKLIVNQMC 132
+ + + LL + G+ + K D K RKLI +
Sbjct: 109 QQKWLALDKSAGEPRVVRKVDSIVDSTQALLADIAAGKEVPKADAENLAKKRKLIKPEQW 168
Query: 133 KGYSVSNALK 142
K Y +S K
Sbjct: 169 KTYKLSKGPK 178
>gi|387017594|gb|AFJ50915.1| Phenylalanyl-tRNA synthetase alpha chain-like [Crotalus adamanteus]
Length = 506
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 30/132 (22%)
Query: 45 LTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSAL-FEIGCS------------ 91
LT EG++ EGS E+++F ++P+E +L+ EL K P + F S
Sbjct: 72 LTPEGQEIIHEGSHEVRVFHSIPSE-GLLQSELMKLPSGKVGFSKAMSNKWIRLDKSSEN 130
Query: 92 -----QSVET--NKFKDLLVRVQDGRA--ISKEDINGGLKARKLIVNQMCKGYSV----- 137
Q+VE+ + ++ L++VQ G A + ++D N LK RKL+ K Y V
Sbjct: 131 GPRIFQAVESVQDTVREKLLQVQKGEANCLEEKDKN-ELKKRKLLAEVTIKTYWVKKGSA 189
Query: 138 -SNALKKEESLL 148
S + K+E+ L
Sbjct: 190 FSTTIAKQETDL 201
>gi|301123667|ref|XP_002909560.1| phenylalanyl-tRNA synthetase alpha chain [Phytophthora infestans
T30-4]
gi|262100322|gb|EEY58374.1| phenylalanyl-tRNA synthetase alpha chain [Phytophthora infestans
T30-4]
Length = 502
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 28/139 (20%)
Query: 29 LFVGLPAQDIKRETR--VLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALF 86
L V D +R T VL DE + A+GS EIQ+F A+ AE + + L+ +A
Sbjct: 48 LLVDAFVADTERSTSFYVLKDEANSFLAQGSPEIQVFHAISAE-GVDRKTLEAAVGAATL 106
Query: 87 EIGCSQSVET--------------------NKFKDLLVRVQ--DG--RAISKEDINGGLK 122
++G ++ ++ ++L RVQ DG A+SK++ N LK
Sbjct: 107 KVGQGACMKNKWIRLDKADGKFYRNVDDVKDEVTEMLRRVQQADGALSAVSKDEAN-TLK 165
Query: 123 ARKLIVNQMCKGYSVSNAL 141
RKL + K Y+++ +
Sbjct: 166 RRKLAEVRTRKSYTLTKGV 184
>gi|374626317|ref|ZP_09698730.1| hypothetical protein HMPREF0978_02050 [Coprobacillus sp.
8_2_54BFAA]
gi|373914174|gb|EHQ46006.1| hypothetical protein HMPREF0978_02050 [Coprobacillus sp.
8_2_54BFAA]
Length = 301
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 34 PAQDIKRETRVLTDEGKK---YAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGC 90
P Q++ RE V KK Y G + F V C +++ ++K P + +G
Sbjct: 150 PMQNVYREPFVFECALKKRSFYLPNGGKMLLQFFHVEDLCRLMETIIKKHPHDHIMNVGN 209
Query: 91 SQSVETNKFKDLLVRV 106
S+ V+ NKF +L +V
Sbjct: 210 SEIVDINKFVELCYQV 225
>gi|327264108|ref|XP_003216858.1| PREDICTED: phenylalanyl-tRNA synthetase alpha chain-like [Anolis
carolinensis]
Length = 506
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 30/118 (25%)
Query: 45 LTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSVETNKF----- 99
LT EG++ EGS E+++F ++P+E +++ EL K P ++G S+++ +NK+
Sbjct: 72 LTPEGQEIVQEGSHEVRVFNSIPSE-GLVQSELMKLPSG---KVGFSKAM-SNKWIQLDK 126
Query: 100 -------------------KDLLVRVQDGRAISKEDINGG-LKARKLIVNQMCKGYSV 137
++ L++VQ G A S E+ + LK RKL+ K Y +
Sbjct: 127 NSEGGPRIFRAVDSVEDSVREKLLQVQQGEADSLEEKDRNELKKRKLLAEVTLKSYWI 184
>gi|403330884|gb|EJY64355.1| Phenylalanine--tRNA ligase [Oxytricha trifallax]
Length = 506
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 36 QDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSVE 95
Q I++++ LTDEG +YA +G+ E Q A+ I K E K + L +IG S++++
Sbjct: 60 QVIEKKSLELTDEGAQYAEKGTPEYQYASALQVNTPINKAEFDKSVGAELAKIGFSKAMQ 119
>gi|358368829|dbj|GAA85445.1| phenylalanyl-tRNA synthetase beta chain cytoplasmic [Aspergillus
kawachii IFO 4308]
Length = 518
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 36/176 (20%)
Query: 2 SLMSSSA--STVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRVLTDEGKKYAAEGSSE 59
S++SS A ST S+ V A L+ ++ + + +E VLT EG++ A GS E
Sbjct: 19 SILSSEAFPSTPSLNVKAALDRLASRQM-----VEYETFDKEVAVLTPEGEEIATNGSHE 73
Query: 60 IQLFLAVPAECSILK------------------DELQK---KPDSALFEIGCSQSVETNK 98
++F AV A LK + +K K D L V+
Sbjct: 74 AKVFQAVLAAMDGLKIAELPGVVGKDNAKIGQGNAFKKGWIKKDKDLLRATTDTIVDET- 132
Query: 99 FKDLLVRVQDGRAISKEDINGGLKARKLIVNQMCKGYSVSNALK------KEESLL 148
++LL+ V++ + ++ + LK RKL+ Q + +S K KEE+ L
Sbjct: 133 -RELLLTVKNTQTLNDQKALTDLKRRKLVALQKVISFKISKGPKFAREFVKEETDL 187
>gi|147918983|ref|YP_687290.1| phenylalanyl-tRNA synthetase subunit alpha [Methanocella arvoryzae
MRE50]
gi|121682807|sp|Q0W0X9.1|SYFA_UNCMA RecName: Full=Phenylalanine--tRNA ligase alpha subunit; AltName:
Full=Phenylalanyl-tRNA synthetase alpha subunit;
Short=PheRS
gi|110622686|emb|CAJ37964.1| phenylalanyl-tRNA synthetase, alpha chain [Methanocella arvoryzae
MRE50]
Length = 495
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 44 VLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSAL 85
VLTDEG+KYAAEG E + A+PA+ L D ++ P + +
Sbjct: 59 VLTDEGRKYAAEGLPERVIHDALPADGITLNDLKKQFPPATV 100
>gi|260825772|ref|XP_002607840.1| hypothetical protein BRAFLDRAFT_199699 [Branchiostoma floridae]
gi|229293189|gb|EEN63850.1| hypothetical protein BRAFLDRAFT_199699 [Branchiostoma floridae]
Length = 1318
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 4 MSSSASTVSVTVDAQLNESVIK---KFGLFVGLPAQDIK-------RETRVLTDEGKKYA 53
+ S + +TV A LN+++ + + GLPA +++ E R+LT K
Sbjct: 692 LESETVSPPITVRAYLNQTISEFKNQLAQATGLPAANMRVVFERYYNELRLLTVANKTLK 751
Query: 54 AEG---SSEIQLFLAVPAECSILKDELQKKPDSALF 86
AEG S++ FL V ECS +D L P S ++
Sbjct: 752 AEGFMRSNKATWFLQVFVECSESQDSLLPLPQSKMW 787
>gi|452824456|gb|EME31459.1| phenylalanyl-tRNA synthetase alpha chain [Galdieria sulphuraria]
Length = 397
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 35 AQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKK 80
A+ I E ++T+EG++YA+ GS E+Q F ++ +E+Q K
Sbjct: 51 AKPISHEYWIVTEEGQEYASRGSPELQTFQSICPTHGTTVEEIQNK 96
>gi|198416258|ref|XP_002128146.1| PREDICTED: zinc finger (CCHC)-15 [Ciona intestinalis]
Length = 497
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 4 MSSSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETR-----VLTDEGKKYAAEGSS 58
+ S+ ++ VD Q IK F IK E R +TDEGK GS
Sbjct: 20 VDSNVLAAALEVDHQAIVGAIKSIQCF----GDVIKVEPRNNKKWCVTDEGKLVIKNGSY 75
Query: 59 EIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSVETNKFK 100
E ++ AVPAE IL+ EL +K +A +IG S+++ K
Sbjct: 76 EYNIYQAVPAE-GILQSELLQKVSNA--KIGFSKAMSNKMIK 114
>gi|282164080|ref|YP_003356465.1| phenylalanyl-tRNA synthetase alpha chain [Methanocella paludicola
SANAE]
gi|282156394|dbj|BAI61482.1| phenylalanyl-tRNA synthetase alpha chain [Methanocella paludicola
SANAE]
Length = 495
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 44 VLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSAL 85
VLTDEG+KYA EG E +F A+P + LK+ K P S +
Sbjct: 59 VLTDEGRKYAEEGLPERIIFNALPDGGASLKELKSKFPPSTV 100
>gi|157132588|ref|XP_001656084.1| phenylalanyl-tRNA synthetase alpha chain [Aedes aegypti]
gi|108881658|gb|EAT45883.1| AAEL002867-PA [Aedes aegypti]
Length = 496
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 40 RETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSV----- 94
R+T LT+EGK+ A GS E LF AVP E I + EL K +A ++G S+++
Sbjct: 56 RKTWELTEEGKQILANGSHEAVLFNAVP-EAGIPQAELMKTSPNA--KVGFSKAMSNGWI 112
Query: 95 -------------ETNKFKDL----LVRVQDGRAISKED-INGGLKARKLIVNQ------ 130
+ +K +D+ + V +GR D I K RK++
Sbjct: 113 LMDKSGGAPLIKKKVDKIEDVVKGHVKAVAEGRDKDIPDNIKNEYKKRKILTETVTKSFV 172
Query: 131 MCKGYSVSNALKKEESLLLI 150
+ KG S +LKK E+ L +
Sbjct: 173 LSKGPEFSTSLKKLETDLTV 192
>gi|432871284|ref|XP_004071891.1| PREDICTED: phenylalanine--tRNA ligase alpha subunit-like [Oryzias
latipes]
Length = 495
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 34/133 (25%)
Query: 45 LTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQ------------ 92
LTDEG + A +GS E ++F ++P E + + EL K + +IG S+
Sbjct: 63 LTDEGTELAEQGSHEARVFGSIPLE-GLPQSELMK---LSFGKIGFSKAMSNKWIRVDKS 118
Query: 93 ---------SVET--NKFKDLLVRVQDGRAISKEDINGGLKARKLIVNQMCKGY------ 135
SVE ++ ++ L+ V+ G + ++D N LK RKL+ K Y
Sbjct: 119 HEGGPRIFRSVENIQDQVREKLLLVRSGAQLEEKDKN-ELKKRKLLTEVTVKSYWITRGS 177
Query: 136 SVSNALKKEESLL 148
S S L K+E+ L
Sbjct: 178 SFSTTLTKQETEL 190
>gi|391340895|ref|XP_003744769.1| PREDICTED: phenylalanine--tRNA ligase alpha subunit B-like
[Metaseiulus occidentalis]
Length = 496
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 4 MSSSASTVSVTVDAQLNESVIKKFGLFVGLPAQDIKRETRV-LTDEGKKYAAEGSSEIQL 62
++S+ + ++ D Q +K F G+ D+K E LT EGK+ A +GS E +
Sbjct: 18 LTSAEAARILSQDHQKIVGAVKSILCFPGIIEADLKAEKSFELTAEGKQIAQDGSHEAAV 77
Query: 63 FLAVPAECSILKDELQK 79
+ AVP + I + +L K
Sbjct: 78 YNAVPIDGGIKQPDLMK 94
>gi|363582702|ref|ZP_09315512.1| aspartate-semialdehyde dehydrogenase [Flavobacteriaceae bacterium
HQM9]
Length = 331
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 28/112 (25%)
Query: 33 LPAQDIKRETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQ 92
+P K E + L+ +GK+Y C +L+ +Q KPD ALF G
Sbjct: 31 IPVASKKSEGKKLSFKGKEYP----------------CVVLETAVQMKPDVALFSAGGDT 74
Query: 93 SVE-TNKFKDLLVRVQDGRAISKED---------INGGL--KARKLIVNQMC 132
S+E KF ++ V D + + D ING + K K+I N C
Sbjct: 75 SLEWAPKFAEVGTTVVDNSSAWRMDPTKKLVVPEINGNVLTKEDKIIANPNC 126
>gi|340382484|ref|XP_003389749.1| PREDICTED: phenylalanyl-tRNA synthetase alpha chain B-like, partial
[Amphimedon queenslandica]
Length = 345
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 30/120 (25%)
Query: 45 LTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSVE--------- 95
LT+EGK+ A GS E++LF AV ++EL P++ +IG S+++
Sbjct: 64 LTEEGKEIAENGSHEVRLFEAVDQSNGTPQNELMVIPNA---KIGFSKAMSNKWLRIDKS 120
Query: 96 --------------TNKFKDLL--VRVQDGRA-ISKEDINGGLKARKLIVNQMCKGYSVS 138
T+ + LL ++ + GR +S E++ K RKLI N + K Y ++
Sbjct: 121 SPGPPQVYRNVESVTDTVRKLLCSLKGESGRGELSDENLK-EFKKRKLITNTIIKSYVIT 179
>gi|124486188|ref|YP_001030804.1| phenylalanyl-tRNA synthetase subunit alpha [Methanocorpusculum
labreanum Z]
gi|166226902|sp|A2ST81.1|SYFA_METLZ RecName: Full=Phenylalanine--tRNA ligase alpha subunit; AltName:
Full=Phenylalanyl-tRNA synthetase alpha subunit;
Short=PheRS
gi|124363729|gb|ABN07537.1| phenylalanyl-tRNA synthetase, alpha subunit [Methanocorpusculum
labreanum Z]
Length = 474
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 41 ETRVLTDEGKKYAAEGSSEIQLFLAVPAECSILKDELQKKPDSALFEIGCSQSVETNKFK 100
E LT+EG+KYA EG E Q+ ++ + SI EL K P S + IG + K
Sbjct: 57 EQAKLTEEGEKYAKEGLPERQILNSI--DGSIPMSELTKNPLSKI-AIGWLRKKNWVTIK 113
Query: 101 DLLVRVQDGRAISKEDI 117
D +V V + A+ ++++
Sbjct: 114 DGIVFVNENTAVGEDEL 130
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.130 0.342
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,887,379,645
Number of Sequences: 23463169
Number of extensions: 66402954
Number of successful extensions: 131551
Number of sequences better than 100.0: 67
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 131472
Number of HSP's gapped (non-prelim): 67
length of query: 150
length of database: 8,064,228,071
effective HSP length: 113
effective length of query: 37
effective length of database: 9,707,857,270
effective search space: 359190718990
effective search space used: 359190718990
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)