Query 031937
Match_columns 150
No_of_seqs 251 out of 1107
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:41:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031937.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031937hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 6.5E-35 2.2E-39 208.8 12.0 142 1-150 1-151 (151)
2 4eld_A MJ16.5-P1, small heat s 100.0 2.7E-30 9.4E-35 186.5 13.0 104 42-149 57-161 (161)
3 3gla_A Low molecular weight he 100.0 1.5E-29 5E-34 169.2 14.0 97 39-136 2-98 (100)
4 4fei_A Heat shock protein-rela 100.0 3.9E-28 1.4E-32 162.9 11.4 94 37-136 2-95 (102)
5 3aab_A Putative uncharacterize 99.9 1.2E-26 4.2E-31 160.5 11.8 94 39-136 22-116 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 1.8E-25 6.1E-30 151.0 13.9 100 41-149 2-105 (106)
7 2klr_A Alpha-crystallin B chai 99.9 2.9E-25 9.9E-30 162.0 10.7 97 43-149 65-162 (175)
8 2wj5_A Heat shock protein beta 99.9 5.9E-25 2E-29 147.2 11.0 95 43-146 3-98 (101)
9 3q9p_A Heat shock protein beta 99.9 6.7E-24 2.3E-28 137.9 11.0 83 46-136 2-85 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 8.8E-23 3E-27 133.9 11.7 85 48-141 3-88 (90)
11 2bol_A TSP36, small heat shock 99.9 2.7E-22 9.2E-27 158.0 10.4 89 39-136 96-189 (314)
12 2bol_A TSP36, small heat shock 99.8 3.4E-21 1.2E-25 151.8 9.1 90 42-136 221-314 (314)
13 1rl1_A Suppressor of G2 allele 99.2 9.3E-11 3.2E-15 79.3 7.7 81 40-136 8-88 (114)
14 2xcm_C SGT1-like protein, cyto 99.2 1E-10 3.6E-15 75.9 7.2 80 41-136 2-81 (92)
15 2k8q_A Protein SHQ1; beta-sand 98.5 1.9E-07 6.6E-12 64.5 6.2 76 40-136 2-82 (134)
16 3eud_A Protein SHQ1; CS domain 98.5 2.7E-06 9.4E-11 57.0 11.1 79 37-136 13-96 (115)
17 3igf_A ALL4481 protein; two-do 98.4 1.2E-06 4.1E-11 70.4 8.5 73 41-136 297-370 (374)
18 1x5m_A Calcyclin-binding prote 98.2 2.8E-05 9.5E-10 53.2 10.8 81 40-136 19-103 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.1 2.9E-05 9.9E-10 53.7 9.7 91 39-136 17-111 (134)
20 1wgv_A KIAA1068 protein; CS do 98.0 9.1E-05 3.1E-09 50.4 10.6 82 39-136 17-101 (124)
21 2o30_A Nuclear movement protei 97.9 0.00012 4E-09 50.3 9.4 76 41-136 4-80 (131)
22 3qor_A Nuclear migration prote 97.9 0.00013 4.3E-09 49.5 9.2 81 37-136 12-96 (121)
23 1ejf_A Progesterone receptor P 97.9 8.6E-05 3E-09 50.6 8.2 77 43-136 5-81 (125)
24 1wfi_A Nuclear distribution ge 97.8 0.00016 5.6E-09 49.5 9.6 78 40-136 6-87 (131)
25 2rh0_A NUDC domain-containing 97.7 0.00066 2.3E-08 48.0 10.5 78 39-136 11-90 (157)
26 2kmw_A Uncharacterized protein 97.6 0.00013 4.6E-09 51.3 6.5 78 40-136 3-81 (150)
27 2cg9_X CO-chaperone protein SB 97.5 4.5E-05 1.5E-09 52.7 2.8 85 40-136 5-97 (134)
28 3q9p_A Heat shock protein beta 85.5 2 6.7E-05 26.5 5.2 33 103-136 8-40 (85)
29 3gla_A Low molecular weight he 80.4 6 0.00021 24.7 6.1 33 103-136 15-47 (100)
30 2y1y_A Alpha-crystallin B chai 78.7 4 0.00014 25.3 4.8 33 103-136 7-39 (90)
31 4fei_A Heat shock protein-rela 78.0 10 0.00034 23.9 6.6 33 52-85 62-95 (102)
32 4eld_A MJ16.5-P1, small heat s 77.3 11 0.00037 25.9 7.1 33 103-136 67-99 (161)
33 3l1e_A Alpha-crystallin A chai 76.9 4.6 0.00016 25.9 4.7 33 103-136 13-45 (106)
34 2wj5_A Heat shock protein beta 74.8 5.5 0.00019 25.2 4.7 33 103-136 12-44 (101)
35 3aab_A Putative uncharacterize 73.5 7.5 0.00026 25.4 5.2 33 103-136 35-68 (123)
36 1gme_A Heat shock protein 16.9 64.4 18 0.00063 24.5 5.8 33 103-136 54-87 (151)
37 2nwt_A UPF0165 protein AF_2212 63.9 5.3 0.00018 24.0 2.5 15 117-131 3-17 (69)
38 2klr_A Alpha-crystallin B chai 60.5 11 0.00037 26.6 4.1 33 103-136 74-106 (175)
39 2cql_A OK/SW-CL.103, 60S ribos 60.4 17 0.00057 23.2 4.7 19 64-83 20-38 (100)
40 1rl6_A Protein (ribosomal prot 52.8 36 0.0012 24.0 5.8 45 64-134 11-55 (177)
41 1nkw_E 50S ribosomal protein L 52.5 43 0.0015 24.4 6.3 46 64-135 39-84 (212)
42 3j21_F 50S ribosomal protein L 50.5 34 0.0011 24.3 5.3 45 64-133 14-58 (184)
43 1vq8_E 50S ribosomal protein L 47.2 44 0.0015 23.6 5.5 47 64-135 9-55 (178)
44 4gzv_A Hypothetical protein; A 44.4 73 0.0025 21.7 8.2 75 39-133 33-109 (142)
45 1ew4_A CYAY protein; friedreic 41.2 16 0.00055 23.6 2.2 18 118-135 29-46 (106)
46 3v2d_H 50S ribosomal protein L 39.3 76 0.0026 22.3 5.7 44 64-133 12-55 (180)
47 2o30_A Nuclear movement protei 38.0 48 0.0016 21.7 4.3 30 103-132 15-44 (131)
48 3iz5_F 60S ribosomal protein L 37.2 1E+02 0.0035 21.9 6.2 46 64-134 13-60 (190)
49 3qqz_A Putative uncharacterize 36.3 1.3E+02 0.0043 22.1 8.7 65 58-131 21-86 (255)
50 4awd_A Beta-porphyranase; hydr 33.5 1.1E+02 0.0037 23.6 6.2 48 63-113 85-145 (324)
51 1n91_A ORF, hypothetical prote 33.4 82 0.0028 20.3 4.7 36 46-83 8-44 (108)
52 3u5e_H L8, RP24, YL11, 60S rib 32.1 1.2E+02 0.0042 21.5 5.9 46 64-134 13-59 (191)
53 3oeq_A Frataxin homolog, mitoc 32.0 33 0.0011 22.8 2.7 16 119-134 49-64 (123)
54 1wgv_A KIAA1068 protein; CS do 28.6 76 0.0026 20.5 4.1 31 103-133 30-61 (124)
55 3t3l_A Frataxin, mitochondrial 28.0 38 0.0013 22.7 2.4 17 117-133 40-56 (129)
56 2hbp_A Cytoskeleton assembly c 27.5 28 0.00097 20.7 1.5 35 45-79 7-41 (68)
57 3iln_A Laminarinase; jelly ROW 27.1 1E+02 0.0034 22.5 4.9 44 69-113 49-97 (251)
58 4i95_A Putative uncharacterize 27.1 1.5E+02 0.0051 20.1 8.7 75 38-132 30-108 (142)
59 2zkr_e 60S ribosomal protein L 25.8 99 0.0034 22.0 4.5 52 58-134 7-61 (192)
60 3bbo_I Ribosomal protein L6; l 24.5 35 0.0012 25.1 1.9 46 64-134 54-99 (223)
61 2ks0_A Uncharacterized protein 24.1 45 0.0015 19.9 2.0 21 62-83 18-38 (71)
62 1nvp_C Transcription initiatio 23.1 34 0.0012 20.8 1.3 15 116-130 46-60 (76)
63 2uwa_A Cellulase; glycoside hy 22.1 1.9E+02 0.0066 21.4 5.7 42 64-113 32-74 (274)
64 1q5l_A Chaperone protein DNAK; 21.9 1.7E+02 0.0057 19.2 4.8 29 118-149 99-130 (135)
65 2kgs_A Uncharacterized protein 21.2 65 0.0022 21.2 2.6 27 59-86 2-28 (132)
66 3r8s_G 50S ribosomal protein L 20.9 61 0.0021 22.7 2.5 43 64-132 11-53 (176)
67 3d33_A Domain of unknown funct 20.5 1.4E+02 0.0047 19.2 4.0 27 105-136 22-48 (108)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=100.00 E-value=6.5e-35 Score=208.81 Aligned_cols=142 Identities=68% Similarity=1.049 Sum_probs=119.9
Q ss_pred CCCCCCccCCCCCCCCCCCCcccc-ccc--CC----C--CCCCCCcCcccceeEEEEcCCeEEEEEEcCCCCCCCeEEEE
Q 031937 1 MSMIPSFFGKRRSSVFDPFSLDVW-DFS--SS----S--QFPQETSAFVNTRVDWKETPEAHVFKADLPGVKKEEVKVEV 71 (150)
Q Consensus 1 m~~~p~~~~~~~~~~~d~~~~~~~-~~~--f~----~--~~~~~~~~~~~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v 71 (150)
||+++. .+.|+||+ ++| +++ |. . ...+.....+.|++||+|++++|+|.++|||+++++|+|++
T Consensus 1 ms~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v 73 (151)
T 1gme_A 1 MSIVRR------SNVFDPFA-DLWADPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEV 73 (151)
T ss_dssp -CCCCS------CCCBCTTC-GGGSSHHHHHHHHGGGTTSSCCSHHHHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEE
T ss_pred Cccccc------ccccCchH-hhhhchhhhhhhhcccccccccccccccCCceEEEEcCCEEEEEEECCCCChHHEEEEE
Confidence 787732 57899998 888 543 21 1 11234456788999999999999999999999999999999
Q ss_pred eCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcCcccCCCceEEecCC
Q 031937 72 EDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGVLTVTVPKAEEAKKSNVRAVQISG 150 (150)
Q Consensus 72 ~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~~~~~~~~~~~I~I~~ 150 (150)
.+++.|+|+|++....+.++.+|+++|+.+|+|.|+|.||.+||.++|+|+|+||+|+|++||.+ +.++..++|+|+|
T Consensus 74 ~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~-~~~~~~~~I~I~~ 151 (151)
T 1gme_A 74 EDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAE-VKKPEVKAIQISG 151 (151)
T ss_dssp ETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCC-CCTTCCCCCCCCC
T ss_pred ecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECCEEEEEEEccC-cCCCCCeEeeeCC
Confidence 65579999999987777778899999999999999999999999999999999999999999998 6666678999987
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.97 E-value=2.7e-30 Score=186.51 Aligned_cols=104 Identities=27% Similarity=0.361 Sum_probs=95.1
Q ss_pred ceeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEee-eeeeEEEEEECCCCcccCCee
Q 031937 42 TRVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVER-SSGAFSRRFRLPENVEVDQIK 120 (150)
Q Consensus 42 p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~-~~g~f~r~i~LP~~vd~~~i~ 120 (150)
+++||+|++++|+|.++|||++++||+|++++ +.|+|+|++......++.+|+++|+ .+|.|.|+|.||.+||.++|+
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEE
Confidence 34999999999999999999999999999997 5999999988766666788999999 999999999999999999999
Q ss_pred EEEeCCEEEEEEeCcCcccCCCceEEecC
Q 031937 121 ASMENGVLTVTVPKAEEAKKSNVRAVQIS 149 (150)
Q Consensus 121 A~~~~GvL~I~lpK~~~~~~~~~~~I~I~ 149 (150)
|+|+||+|+|++||.+ ..+ .++|+|+
T Consensus 136 A~~~nGvL~I~lpK~~-~~~--~r~I~Ie 161 (161)
T 4eld_A 136 AKFENGVLSVILPKAE-SSI--KKGINIE 161 (161)
T ss_dssp EEEETTEEEEEEEBCG-GGS--CCCCCCC
T ss_pred EEEECCEEEEEEEcCC-CCC--CcEeecC
Confidence 9999999999999988 554 4888886
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.97 E-value=1.5e-29 Score=169.19 Aligned_cols=97 Identities=38% Similarity=0.672 Sum_probs=91.9
Q ss_pred cccceeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCC
Q 031937 39 FVNTRVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQ 118 (150)
Q Consensus 39 ~~~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~ 118 (150)
.|.|++||+|++++|+|.++|||+++++|+|++.+ +.|+|+|++......++.+|+++|+.+|+|+|+|.||.+||.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 47899999999999999999999999999999996 59999999988777778899999999999999999999999999
Q ss_pred eeEEEeCCEEEEEEeCcC
Q 031937 119 IKASMENGVLTVTVPKAE 136 (150)
Q Consensus 119 i~A~~~~GvL~I~lpK~~ 136 (150)
|+|+|+||+|+|++||.+
T Consensus 81 i~A~~~~GvL~I~~pK~~ 98 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRP 98 (100)
T ss_dssp CEEEEETTEEEEEEEBC-
T ss_pred eEEEEeCCEEEEEEecCC
Confidence 999999999999999987
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.95 E-value=3.9e-28 Score=162.94 Aligned_cols=94 Identities=30% Similarity=0.440 Sum_probs=87.7
Q ss_pred cCcccceeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCccc
Q 031937 37 SAFVNTRVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEV 116 (150)
Q Consensus 37 ~~~~~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~ 116 (150)
.+.|.|++||+|++++|+|.++|||+++++|+|++++ +.|+|+|++.. +.+|+++|+.+|+|.|+|.||.+||.
T Consensus 2 ~g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~vd~ 75 (102)
T 4fei_A 2 GGPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG-----TEHLLRSERPSGRFVRELAFPEPVRP 75 (102)
T ss_dssp CEECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC-----CSSCSSCCSEEEEEEEEEECSSCBCT
T ss_pred CCcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec-----CCCEEEEEEeccEEEEEEECCCCcch
Confidence 3568899999999999999999999999999999996 59999999853 36788899999999999999999999
Q ss_pred CCeeEEEeCCEEEEEEeCcC
Q 031937 117 DQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 117 ~~i~A~~~~GvL~I~lpK~~ 136 (150)
++|+|+|+||+|+|++||.+
T Consensus 76 ~~i~A~~~~GvL~I~lpK~~ 95 (102)
T 4fei_A 76 ASGVASLAGGVLTVRFEKLR 95 (102)
T ss_dssp TCCEEEEETTEEEEEEEBSS
T ss_pred hHcEEEEECCEEEEEEEccC
Confidence 99999999999999999987
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.94 E-value=1.2e-26 Score=160.47 Aligned_cols=94 Identities=34% Similarity=0.424 Sum_probs=87.1
Q ss_pred cccceeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCC
Q 031937 39 FVNTRVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQ 118 (150)
Q Consensus 39 ~~~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~ 118 (150)
.+.|++||+|++++|+|.++|||++++||+|++.+++.|+|+|++.... +.+|+++|+.+ +|.|+|.||.+||.++
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~ 97 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKDA 97 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTTC
T ss_pred cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcch
Confidence 4569999999999999999999999999999999625999999986543 67899999999 9999999999999999
Q ss_pred e-eEEEeCCEEEEEEeCcC
Q 031937 119 I-KASMENGVLTVTVPKAE 136 (150)
Q Consensus 119 i-~A~~~~GvL~I~lpK~~ 136 (150)
| +|+|+||+|+|++||.+
T Consensus 98 i~~A~~~~GvL~I~lPK~~ 116 (123)
T 3aab_A 98 EISGKYENGVLTIRIPIAG 116 (123)
T ss_dssp CCEEEEETTEEEEEEEGGG
T ss_pred hCeeEEcCCEEEEEEEcCC
Confidence 9 99999999999999988
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=1.8e-25 Score=150.99 Aligned_cols=100 Identities=24% Similarity=0.460 Sum_probs=85.4
Q ss_pred cceeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCee
Q 031937 41 NTRVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIK 120 (150)
Q Consensus 41 ~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~ 120 (150)
+...+|+|++++|+|.++||||+++||+|++.+ +.|+|+|++..... +..|+++ .|.|+|.||.+||.++|+
T Consensus 2 sg~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~--~~~~~~~-----eF~R~~~LP~~vd~~~i~ 73 (106)
T 3l1e_A 2 SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQD--DHGYISR-----EFHRRYRLPSNVDQSALS 73 (106)
T ss_dssp CCSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEET--TTEEEEE-----EEEEEEECCTTBCTTSCE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccC--CCCEEEE-----EEEEEEECCCCcChhHcE
Confidence 346899999999999999999999999999997 59999999765432 3455543 599999999999999999
Q ss_pred EEE-eCCEEEEEEeCcCccc---CCCceEEecC
Q 031937 121 ASM-ENGVLTVTVPKAEEAK---KSNVRAVQIS 149 (150)
Q Consensus 121 A~~-~~GvL~I~lpK~~~~~---~~~~~~I~I~ 149 (150)
|+| +||+|+|++||.+ ++ ....++|+|+
T Consensus 74 A~~s~~GvL~I~~PK~~-~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 74 CSLSADGMLTFSGPKIP-SGVDAGHSERAIPVS 105 (106)
T ss_dssp EEECTTSEEEEEEEBCC-CCTTTTSSSCCCCCC
T ss_pred EEECCCCEEEEEEEccC-cccccCCCCeEeeec
Confidence 999 8999999999998 43 2466899985
No 7
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.92 E-value=2.9e-25 Score=162.04 Aligned_cols=97 Identities=24% Similarity=0.437 Sum_probs=72.7
Q ss_pred eeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEE
Q 031937 43 RVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKAS 122 (150)
Q Consensus 43 ~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~ 122 (150)
.+||+|++++|+|.++|||++++||+|++.+ +.|+|+|++.... ++.+|+++ .|.|+|.||.+||.++|+|+
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~--~~~~~~~r-----eF~R~~~LP~~Vd~~~i~A~ 136 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ--DEHGFISR-----EFHRKYRIPADVDPLTITSS 136 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEEEE--ETTEEEEE-----EEEEEEECTTTCCTTTCEEE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccc--cCCceEEE-----EEEEEEECCCCcChhHeEEE
Confidence 3799999999999999999999999999997 5999999986543 23456554 49999999999999999999
Q ss_pred E-eCCEEEEEEeCcCcccCCCceEEecC
Q 031937 123 M-ENGVLTVTVPKAEEAKKSNVRAVQIS 149 (150)
Q Consensus 123 ~-~~GvL~I~lpK~~~~~~~~~~~I~I~ 149 (150)
| +||+|+|++||.+ ..+ ..++|+|+
T Consensus 137 ~s~dGvL~I~lPK~~-~~~-~~r~I~I~ 162 (175)
T 2klr_A 137 LSSDGVLTVNGPRKQ-VSG-PERTIPIT 162 (175)
T ss_dssp ECTTSCEEEEEECC--------------
T ss_pred EcCCCEEEEEEECCC-CCC-CCeEEEEe
Confidence 9 7999999999987 332 34888885
No 8
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.92 E-value=5.9e-25 Score=147.20 Aligned_cols=95 Identities=21% Similarity=0.332 Sum_probs=80.7
Q ss_pred eeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEE
Q 031937 43 RVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKAS 122 (150)
Q Consensus 43 ~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~ 122 (150)
.+||+|++++|+|.++|||++++||+|++.+ +.|+|+|++.... ++.+|+++| |.|+|.||.+||.++|+|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~ 74 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEERP--DEHGFIARE-----FHRRYRLPPGVDPAAVTSA 74 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEECS--STTCCEEEE-----EEEEEECCTTBCTTCCEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHCEEE
Confidence 5799999999999999999999999999997 5999999987543 234565543 9999999999999999999
Q ss_pred E-eCCEEEEEEeCcCcccCCCceEE
Q 031937 123 M-ENGVLTVTVPKAEEAKKSNVRAV 146 (150)
Q Consensus 123 ~-~~GvL~I~lpK~~~~~~~~~~~I 146 (150)
| +||+|+|++||.+ +.++....|
T Consensus 75 ~s~nGvL~I~lPK~~-~~~~~~~~i 98 (101)
T 2wj5_A 75 LSPEGVLSIQATPAS-AQASLPSPP 98 (101)
T ss_dssp ECTTSEEEEEECBCC-CCCSSCC--
T ss_pred ECCCCEEEEEEECCC-cCCCCCCcc
Confidence 9 8999999999998 666644444
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.91 E-value=6.7e-24 Score=137.89 Aligned_cols=83 Identities=25% Similarity=0.472 Sum_probs=69.7
Q ss_pred EEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEe-
Q 031937 46 WKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASME- 124 (150)
Q Consensus 46 v~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~- 124 (150)
+.|++++|+|.++|||++++||+|++.+ +.|+|+|++.....+ . +..+|+|.|+|.||.+||.++|+|+|.
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~--~-----~~~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQDE--H-----GYISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC--------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccCC--C-----CEEEEEEEEEEECCCCcChHHcEEEECC
Confidence 4689999999999999999999999997 599999998754322 1 234679999999999999999999998
Q ss_pred CCEEEEEEeCcC
Q 031937 125 NGVLTVTVPKAE 136 (150)
Q Consensus 125 ~GvL~I~lpK~~ 136 (150)
||+|+|++||.+
T Consensus 74 ~GvL~I~lPK~k 85 (85)
T 3q9p_A 74 EGTLTVEAPMPK 85 (85)
T ss_dssp TSEEEEEEECCC
T ss_pred CCEEEEEEEcCC
Confidence 999999999964
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.89 E-value=8.8e-23 Score=133.89 Aligned_cols=85 Identities=26% Similarity=0.462 Sum_probs=69.1
Q ss_pred EcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEE-eCC
Q 031937 48 ETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASM-ENG 126 (150)
Q Consensus 48 e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~-~~G 126 (150)
+++++|+|.++|||++++||+|++.+ +.|+|+|++.... ++.+|+++ .|.|+|.||.+||.++|+|+| +||
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~~~G 74 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ--DEHGFISR-----EFHRKYRIPADVDPLTITSSMSSDG 74 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEE--CSSSEEEE-----EEEEEEECCTTBCGGGCEEEECTTS
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEE-----EEEEEEECCCCcChhHcEEEECCCC
Confidence 67899999999999999999999997 5999999987543 34556654 499999999999999999999 899
Q ss_pred EEEEEEeCcCcccCC
Q 031937 127 VLTVTVPKAEEAKKS 141 (150)
Q Consensus 127 vL~I~lpK~~~~~~~ 141 (150)
+|+|++||.+ .+++
T Consensus 75 vL~I~~pK~~-~~~p 88 (90)
T 2y1y_A 75 VLTVNGPRKQ-VSGP 88 (90)
T ss_dssp EEEEEECBC------
T ss_pred EEEEEEEcCC-CCCC
Confidence 9999999987 4444
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.87 E-value=2.7e-22 Score=158.04 Aligned_cols=89 Identities=21% Similarity=0.328 Sum_probs=80.8
Q ss_pred cccceeEEEEcCC----eEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCc
Q 031937 39 FVNTRVDWKETPE----AHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENV 114 (150)
Q Consensus 39 ~~~p~~dv~e~~~----~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v 114 (150)
.+.|++||+|+++ +|+|.++|||+++++|+|++.+ +.|+|+|++....+. ++.+|+|.|+|.||.+|
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~~~e~--------~r~~g~F~R~~~LP~~V 166 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSVACGD--------AAMSESVGRSIPLPPSV 166 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBSSTTC--------CCBCCCEEEEEECCTTB
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEeccCCC--------CEEEEEEEEEEECCCCc
Confidence 4779999999999 9999999999999999999997 599999998743321 27789999999999999
Q ss_pred ccCCeeEEEe-CCEEEEEEeCcC
Q 031937 115 EVDQIKASME-NGVLTVTVPKAE 136 (150)
Q Consensus 115 d~~~i~A~~~-~GvL~I~lpK~~ 136 (150)
|.++|+|+|+ ||+|+|++||.+
T Consensus 167 d~e~i~A~~~~nGVL~I~lPK~~ 189 (314)
T 2bol_A 167 DRNHIQATITTDDVLVIEAPVNE 189 (314)
T ss_dssp CGGGCEEEECSSSEEEEEEEBSS
T ss_pred cccccEEEEeCCCEEEEEEeccC
Confidence 9999999999 999999999988
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.84 E-value=3.4e-21 Score=151.76 Aligned_cols=90 Identities=18% Similarity=0.286 Sum_probs=70.8
Q ss_pred ceeEEEEcC---CeEEEEEEc-CCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccC
Q 031937 42 TRVDWKETP---EAHVFKADL-PGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVD 117 (150)
Q Consensus 42 p~~dv~e~~---~~~~l~~~l-PG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~ 117 (150)
..++|.+++ +.|.|.++| ||++++||+|++++ +.|+|+|+++.+.+ .++++|+.+|.|.|+|.||++||.+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~ 295 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDAS 295 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC----------------CEEEEEEEECSSEECGG
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChH
Confidence 446777655 589999999 99999999999996 69999999875432 5788999999999999999999999
Q ss_pred CeeEEEeCCEEEEEEeCcC
Q 031937 118 QIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 118 ~i~A~~~~GvL~I~lpK~~ 136 (150)
+|+|+|+||||+|++||.+
T Consensus 296 ~i~A~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 296 KTQAEIVDGLMVVEAPLFK 314 (314)
T ss_dssp GCEEEEETTEEEEEEEEEC
T ss_pred HeEEEEeCCEEEEEEecCC
Confidence 9999999999999999863
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.17 E-value=9.3e-11 Score=79.25 Aligned_cols=81 Identities=17% Similarity=0.273 Sum_probs=70.9
Q ss_pred ccceeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCe
Q 031937 40 VNTRVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQI 119 (150)
Q Consensus 40 ~~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i 119 (150)
..|+++|+++.+.+.|.+.+||+.++++.|.+.+ +.|.|++... ++ ..|...+.|+..|+++..
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~-----~~----------~~y~~~~~L~~~I~~e~s 71 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLP-----SG----------EDYNLKLELLHPIIPEQS 71 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECT-----TS----------SEEEEEECBSSCCCGGGE
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeC-----CC----------cEEEEEeeCCCcCCcccc
Confidence 4678999999999999999999999999999997 5899987632 11 147778999999999999
Q ss_pred eEEEeCCEEEEEEeCcC
Q 031937 120 KASMENGVLTVTVPKAE 136 (150)
Q Consensus 120 ~A~~~~GvL~I~lpK~~ 136 (150)
++++.+|.|+|+|+|.+
T Consensus 72 ~~~~~~~~l~i~L~K~~ 88 (114)
T 1rl1_A 72 TFKVLSTKIEIKLKKPE 88 (114)
T ss_dssp EEEECSSSEEEEEECSS
T ss_pred EEEEECCEEEEEEEcCC
Confidence 99999999999999987
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.15 E-value=1e-10 Score=75.90 Aligned_cols=80 Identities=19% Similarity=0.296 Sum_probs=70.3
Q ss_pred cceeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCee
Q 031937 41 NTRVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIK 120 (150)
Q Consensus 41 ~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~ 120 (150)
.|+++|+++.+.+.|.+.+||+.++++.|.+.+ +.|.|++... ++ ..|...+.|+..|+++..+
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~-----~~----------~~y~~~~~L~~~I~~~~s~ 65 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVP-----GE----------DAYYLQPRLFGKIIPDKCK 65 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCT-----TS----------CCEEECCBBSSCBCGGGCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcC-----CC----------cEEEEeeEcCCccCchhEE
Confidence 578999999999999999999999999999997 5899987532 11 2477788999999999999
Q ss_pred EEEeCCEEEEEEeCcC
Q 031937 121 ASMENGVLTVTVPKAE 136 (150)
Q Consensus 121 A~~~~GvL~I~lpK~~ 136 (150)
+++.+|.|+|+|.|.+
T Consensus 66 ~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 66 YEVLSTKIEICLAKAD 81 (92)
T ss_dssp EEECSSCEEEEEEBSS
T ss_pred EEEECCEEEEEEEcCC
Confidence 9999999999999987
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.52 E-value=1.9e-07 Score=64.51 Aligned_cols=76 Identities=13% Similarity=0.310 Sum_probs=66.4
Q ss_pred ccceeEEEEcCCeEEEEEEcCCCC--CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCc-cc
Q 031937 40 VNTRVDWKETPEAHVFKADLPGVK--KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENV-EV 116 (150)
Q Consensus 40 ~~p~~dv~e~~~~~~l~~~lPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v-d~ 116 (150)
.+|...+..+++.++|.+.+|... ..++++.+++ +.+..... .|.-++.||..| +.
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~~--------------------PYyLRL~LP~~V~e~ 60 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS--------------------PYYLRLRFPHELIDD 60 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECSS--------------------SSCEEECCSSCEECC
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEecC--------------------CeEEEecCCCeeecC
Confidence 479999999999999999999999 8999999995 67777633 355679999998 88
Q ss_pred CCeeEEE--eCCEEEEEEeCcC
Q 031937 117 DQIKASM--ENGVLTVTVPKAE 136 (150)
Q Consensus 117 ~~i~A~~--~~GvL~I~lpK~~ 136 (150)
++.+|+| +.|.|+|++||..
T Consensus 61 ~~~kA~YD~d~~~~~VtLpK~~ 82 (134)
T 2k8q_A 61 ERSTAQYDSKDECINVKVAKLN 82 (134)
T ss_dssp SSCEEEEETTTTEEEEEEEESS
T ss_pred CCcceeEeccCCEEEEEEeCCC
Confidence 8899999 5999999999987
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.49 E-value=2.7e-06 Score=57.00 Aligned_cols=79 Identities=13% Similarity=0.305 Sum_probs=67.6
Q ss_pred cCcccceeEEEEcCCeEEEEEEcCCCC--CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCc
Q 031937 37 SAFVNTRVDWKETPEAHVFKADLPGVK--KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENV 114 (150)
Q Consensus 37 ~~~~~p~~dv~e~~~~~~l~~~lPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v 114 (150)
..+.+|...+.++++.++|.+.+|-+. ..++++.+++ +.+....+ .|.-++.||..+
T Consensus 13 ~~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~~--------------------PYyLRL~lP~~v 71 (115)
T 3eud_A 13 DKMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS--------------------PYYLRLRFPHEL 71 (115)
T ss_dssp -CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEET--------------------TEEEEEECSSCE
T ss_pred CCEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEecC--------------------CeEEEEecCcce
Confidence 457789999999999999999999877 7899999995 68877743 366679999996
Q ss_pred -ccCCeeEEE--eCCEEEEEEeCcC
Q 031937 115 -EVDQIKASM--ENGVLTVTVPKAE 136 (150)
Q Consensus 115 -d~~~i~A~~--~~GvL~I~lpK~~ 136 (150)
+.++.+|+| ++|.++|++||..
T Consensus 72 ved~~~~A~YD~d~g~~~v~lpK~~ 96 (115)
T 3eud_A 72 IDDERSTAQYDSKDECINVKVAKLN 96 (115)
T ss_dssp ECSTTCEEEEETTTTEEEEEEEESS
T ss_pred ecCCCcceEEeCCCcEEEEEEcCCc
Confidence 777889999 5999999999987
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.38 E-value=1.2e-06 Score=70.41 Aligned_cols=73 Identities=18% Similarity=0.263 Sum_probs=60.9
Q ss_pred cceeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCC-e
Q 031937 41 NTRVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQ-I 119 (150)
Q Consensus 41 ~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~-i 119 (150)
.+++.|.+. .|.+++.|||+++++|++...+ ..|+|+ .|.|+|.|.||..+.... .
T Consensus 297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~g-deL~v~--------------------~g~~rR~i~LP~~L~~~~v~ 353 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQYG-PEVTVE--------------------AGDQRRNIFLPPALSGRPIT 353 (374)
T ss_dssp CCSEEEETT--TTEEEEECTTCCGGGCEEEEET-TEEEEE--------------------ETTEEEEEECCTTTTTCCEE
T ss_pred CCCEEEEec--cEEEEEECCCCCHHHeEEEEEC-CeEEEE--------------------ECCEeecccCCHHHcCCCcc
Confidence 456666544 8999999999999999999985 589998 568999999999976654 6
Q ss_pred eEEEeCCEEEEEEeCcC
Q 031937 120 KASMENGVLTVTVPKAE 136 (150)
Q Consensus 120 ~A~~~~GvL~I~lpK~~ 136 (150)
.|+|+||.|+|++-...
T Consensus 354 ~A~~~~~~L~i~~~~~~ 370 (374)
T 3igf_A 354 GAKFQNNYLIISFLEHH 370 (374)
T ss_dssp EEEEETTEEEEEECCC-
T ss_pred ccEEECCEEEEEEehhc
Confidence 79999999999987554
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.18 E-value=2.8e-05 Score=53.19 Aligned_cols=81 Identities=15% Similarity=0.236 Sum_probs=67.4
Q ss_pred ccceeEEEEcCCeEEEEEEcCCC---CCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEE-CCCCcc
Q 031937 40 VNTRVDWKETPEAHVFKADLPGV---KKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFR-LPENVE 115 (150)
Q Consensus 40 ~~p~~dv~e~~~~~~l~~~lPG~---~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~-LP~~vd 115 (150)
..+.++|+++.+.+.|.+.++|+ .++++.|.+.. +.|.|...... +. .|.-.+. |-..|+
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~-----~~----------~y~~~~~~L~~~I~ 82 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN-----GK----------SYSMIVNNLLKPIS 82 (127)
T ss_dssp ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS-----SS----------CEEEEEECBSSCCC
T ss_pred CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC-----CC----------cEEEEhHHhcCccC
Confidence 34689999999999999999999 89999999997 68998864211 11 3555675 999999
Q ss_pred cCCeeEEEeCCEEEEEEeCcC
Q 031937 116 VDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 116 ~~~i~A~~~~GvL~I~lpK~~ 136 (150)
++.-+.+...+.++|+|-|.+
T Consensus 83 ~e~S~~~v~~~kVei~L~K~~ 103 (127)
T 1x5m_A 83 VEGSSKKVKTDTVLILCRKKV 103 (127)
T ss_dssp TTTCEEEEETTEEEEEEECSS
T ss_pred cccCEEEEeCCEEEEEEEECC
Confidence 999899999999999999987
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.11 E-value=2.9e-05 Score=53.75 Aligned_cols=91 Identities=14% Similarity=0.215 Sum_probs=69.5
Q ss_pred cccceeEEEEc-CCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeee---eEEEEEECCCCc
Q 031937 39 FVNTRVDWKET-PEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSG---AFSRRFRLPENV 114 (150)
Q Consensus 39 ~~~p~~dv~e~-~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g---~f~r~i~LP~~v 114 (150)
...++++|+++ .+.+.|.+.++++.++++.|.+.+ +.|.|......... ....-..| .|.-.+.|-..|
T Consensus 17 ~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~------l~~~~a~g~~~~y~~~~~L~~~I 89 (134)
T 1wh0_A 17 LAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNF------LRLHPGCGPHTTFRWQVKLRNLI 89 (134)
T ss_dssp ESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHH------HHHSTTCCTTSCEEEEEEBSSCE
T ss_pred ccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcc------cccccccCcceeEEEeccccccC
Confidence 34588999999 999999999999999999999997 58998865321100 00000001 466678899999
Q ss_pred ccCCeeEEEeCCEEEEEEeCcC
Q 031937 115 EVDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 115 d~~~i~A~~~~GvL~I~lpK~~ 136 (150)
+++.-+.++..+.++|+|.|++
T Consensus 90 ~pe~S~~~v~~~kIeI~L~K~e 111 (134)
T 1wh0_A 90 EPEQCTFCFTASRIDICLRKRQ 111 (134)
T ss_dssp EEEEEEEEECSSEEEEEEEESS
T ss_pred CchhCEEEEeCCEEEEEEEECC
Confidence 9998888888999999999976
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.02 E-value=9.1e-05 Score=50.38 Aligned_cols=82 Identities=16% Similarity=0.263 Sum_probs=65.9
Q ss_pred cccceeEEEEcCCeEEEEEEcC-CC-CCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCccc
Q 031937 39 FVNTRVDWKETPEAHVFKADLP-GV-KKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEV 116 (150)
Q Consensus 39 ~~~p~~dv~e~~~~~~l~~~lP-G~-~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~ 116 (150)
...|.+.|.++.+.+.|.+.|| |+ +.+++.|.+.. +.|.|..+.. .+. .+.-...|...|++
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~-----~~~----------~~~~~~~L~~~I~~ 80 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEE-----NGE----------RVLMEGKLTHKINT 80 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECS-----SSE----------EEEEEEEBSSCBCT
T ss_pred CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEcc-----CCC----------ceEEcccccCcCCC
Confidence 4468999999999999999998 87 89999999997 6899886421 111 12234679999999
Q ss_pred CCeeEEEeCCE-EEEEEeCcC
Q 031937 117 DQIKASMENGV-LTVTVPKAE 136 (150)
Q Consensus 117 ~~i~A~~~~Gv-L~I~lpK~~ 136 (150)
+.-+.++.++- |.|+|-|.+
T Consensus 81 e~S~w~i~~~k~v~i~L~K~~ 101 (124)
T 1wgv_A 81 ESSLWSLEPGKCVLVNLSKVG 101 (124)
T ss_dssp TTCEEEECTTSEEEEEECBSS
T ss_pred cCCEEEEeCCCEEEEEEEECC
Confidence 99999998884 999999976
No 21
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.89 E-value=0.00012 Score=50.33 Aligned_cols=76 Identities=13% Similarity=0.242 Sum_probs=61.4
Q ss_pred cceeEEEEcCCeEEEEEEcC-CCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCe
Q 031937 41 NTRVDWKETPEAHVFKADLP-GVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQI 119 (150)
Q Consensus 41 ~p~~dv~e~~~~~~l~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i 119 (150)
.|.+.|.++.+.+.|.+.|| |++.+++.|.+.. +.|.|... +. . .-...|...|+++.-
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--------g~----------~-~~~~~L~~~I~~e~S 63 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--------GE----------I-VIDGELLHEVDVSSL 63 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--------TE----------E-EEEEEBSSCEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--------CE----------e-eEccccccccccccC
Confidence 58899999999999999996 8999999999997 58988853 10 1 123578999999988
Q ss_pred eEEEeCCEEEEEEeCcC
Q 031937 120 KASMENGVLTVTVPKAE 136 (150)
Q Consensus 120 ~A~~~~GvL~I~lpK~~ 136 (150)
+.++.++-|.|+|-|..
T Consensus 64 ~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 64 WWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEETTEEEEEEEESS
T ss_pred EEEEeCCEEEEEEEECC
Confidence 88999999999999975
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.87 E-value=0.00013 Score=49.50 Aligned_cols=81 Identities=17% Similarity=0.211 Sum_probs=65.2
Q ss_pred cCcccceeEEEEcCCeEEEEEEcCC---CCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCC
Q 031937 37 SAFVNTRVDWKETPEAHVFKADLPG---VKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPEN 113 (150)
Q Consensus 37 ~~~~~p~~dv~e~~~~~~l~~~lPG---~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~ 113 (150)
-+...|.+.|.++.+.+.|++.||. ++.+++.|.+.. +.|.|..+.. . +.-...|...
T Consensus 12 nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~g~L~~~ 72 (121)
T 3qor_A 12 NGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ--------P----------AIIDGELYNE 72 (121)
T ss_dssp SSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS--------C----------CSEEEEBSSC
T ss_pred CCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc--------c----------eEEecccccc
Confidence 3455688999999999999999984 789999999997 5888864310 0 1123578999
Q ss_pred cccCCeeEEEeCC-EEEEEEeCcC
Q 031937 114 VEVDQIKASMENG-VLTVTVPKAE 136 (150)
Q Consensus 114 vd~~~i~A~~~~G-vL~I~lpK~~ 136 (150)
|+++....++++| .|.|+|-|..
T Consensus 73 I~~deS~w~i~~~~~i~i~L~K~~ 96 (121)
T 3qor_A 73 VKVEESSWLIADGAVVTVHLEKIN 96 (121)
T ss_dssp BCGGGCEEEEETTTEEEEEEEBSS
T ss_pred ccccccEEEEcCCCEEEEEEEECC
Confidence 9999999999998 9999999986
No 23
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.85 E-value=8.6e-05 Score=50.58 Aligned_cols=77 Identities=14% Similarity=0.156 Sum_probs=64.1
Q ss_pred eeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEE
Q 031937 43 RVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKAS 122 (150)
Q Consensus 43 ~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~ 122 (150)
.++++++.+.+.|++.+|+. +++.|.+.. +.|.+++.... ++ ..|.-.+.|-..|+++..+.+
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~----~~----------~~y~~~l~L~~~I~~e~S~~~ 67 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGS----DN----------FKHLNEIDLFHCIDPNDSKHK 67 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETT----TT----------EEEEEEEEBSSCEEEEEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCC----CC----------ceEEEEEEccceeccccCEEE
Confidence 89999999999999999995 799999997 58999876311 11 136667889999999988888
Q ss_pred EeCCEEEEEEeCcC
Q 031937 123 MENGVLTVTVPKAE 136 (150)
Q Consensus 123 ~~~GvL~I~lpK~~ 136 (150)
..++.++|+|.|.+
T Consensus 68 v~~~kiei~L~K~~ 81 (125)
T 1ejf_A 68 RTDRSILCCLRKGE 81 (125)
T ss_dssp ECSSCEEEEEEESS
T ss_pred ECCCEEEEEEEECC
Confidence 88889999999986
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.85 E-value=0.00016 Score=49.53 Aligned_cols=78 Identities=21% Similarity=0.287 Sum_probs=63.9
Q ss_pred ccceeEEEEcCCeEEEEEEcC-C--CCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCccc
Q 031937 40 VNTRVDWKETPEAHVFKADLP-G--VKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEV 116 (150)
Q Consensus 40 ~~p~~dv~e~~~~~~l~~~lP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~ 116 (150)
..|.+.|.++.+...|.+.|| | ++.+++.|.+.. +.|.|..+.. .+ .-...|...|++
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~~----------~~~~~L~~~I~~ 66 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQ--------PP----------VVDGELYNEVKV 66 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTS--------CC----------SBCSCBSSCBCS
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCc--------eE----------EEeccccccccc
Confidence 458899999999999999999 6 899999999997 5898885311 00 012458889999
Q ss_pred CCeeEEEeCC-EEEEEEeCcC
Q 031937 117 DQIKASMENG-VLTVTVPKAE 136 (150)
Q Consensus 117 ~~i~A~~~~G-vL~I~lpK~~ 136 (150)
+.-+.++.+| .|.|+|-|..
T Consensus 67 e~s~w~i~~~k~v~i~L~K~~ 87 (131)
T 1wfi_A 67 EESSWLIEDGKVVTVHLEKIN 87 (131)
T ss_dssp TTCEEEEETTTEEEEEEEBSS
T ss_pred ccCEEEEcCCCEEEEEEEECC
Confidence 9999999998 8999999986
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.66 E-value=0.00066 Score=48.04 Aligned_cols=78 Identities=13% Similarity=0.287 Sum_probs=64.8
Q ss_pred cccceeEEEEcCCeEEEEEEcC-CCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccC
Q 031937 39 FVNTRVDWKETPEAHVFKADLP-GVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVD 117 (150)
Q Consensus 39 ~~~p~~dv~e~~~~~~l~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~ 117 (150)
...|.+.|.++.+.+.|+|.|| |++.++|.|.+.. +.|.|..+ +.. + -...|...|+++
T Consensus 11 ~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--------g~~----------~-l~g~L~~~I~~e 70 (157)
T 2rh0_A 11 CGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--------GRE----------I-LKGKLFDSTIAD 70 (157)
T ss_dssp EECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--------TEE----------E-EEEEBSSCBCGG
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--------CEE----------E-EeeccccccCcc
Confidence 3568999999999999999998 8899999999997 58988753 100 1 235799999999
Q ss_pred CeeEEEeCC-EEEEEEeCcC
Q 031937 118 QIKASMENG-VLTVTVPKAE 136 (150)
Q Consensus 118 ~i~A~~~~G-vL~I~lpK~~ 136 (150)
.-+.++.++ .|.|+|-|..
T Consensus 71 eS~w~i~~~k~v~I~L~K~~ 90 (157)
T 2rh0_A 71 EGTWTLEDRKMVRIVLTKTK 90 (157)
T ss_dssp GCEEEEECCCEEEEEEEBSS
T ss_pred ccEEEEcCCcEEEEEEEEcC
Confidence 999999887 4999999987
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.63 E-value=0.00013 Score=51.28 Aligned_cols=78 Identities=15% Similarity=0.310 Sum_probs=63.7
Q ss_pred ccceeEEEEcCCeEEEEEEcCCCCCCCeEEEEe-CCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCC
Q 031937 40 VNTRVDWKETPEAHVFKADLPGVKKEEVKVEVE-DDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQ 118 (150)
Q Consensus 40 ~~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~ 118 (150)
..|.++|+++.+.+.|+|.++++ +++.|.+. . +.|.+++. . . .+ ..|.-.+.|=..|+++
T Consensus 3 ~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~--~--~~----------~~y~~~l~L~~~Idpe- 63 (150)
T 2kmw_A 3 RNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-G--A--QG----------ERFEFSLELYGKIMTE- 63 (150)
T ss_dssp ECCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-T--T--TT----------EEEEEEEEBSSCEEEE-
T ss_pred cCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-c--C--CC----------ceEEEEeEhhhccccc-
Confidence 46899999999999999999997 57888888 5 68999976 1 1 11 1466678899999999
Q ss_pred eeEEEeCCEEEEEEeCcC
Q 031937 119 IKASMENGVLTVTVPKAE 136 (150)
Q Consensus 119 i~A~~~~GvL~I~lpK~~ 136 (150)
.+.+....-+.|+|.|++
T Consensus 64 S~~~v~~~kIei~L~K~e 81 (150)
T 2kmw_A 64 YRKNVGLRNIIFSIQKEE 81 (150)
T ss_dssp EEEEEESSSEEEEEEECC
T ss_pred ceEEecCCEEEEEEEECC
Confidence 888888888999999976
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.52 E-value=4.5e-05 Score=52.70 Aligned_cols=85 Identities=13% Similarity=0.289 Sum_probs=59.1
Q ss_pred ccceeEEEEcCCe-------EEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCC
Q 031937 40 VNTRVDWKETPEA-------HVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPE 112 (150)
Q Consensus 40 ~~p~~dv~e~~~~-------~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~ 112 (150)
..|.+.|+++.+. +.|++.+|++. ++.|.+.. +.|.+++.........+ ...|.-.+.|..
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~g~~~---------~~~y~~~l~L~~ 72 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHVGDEN---------VHHYQLHIDLYK 72 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC----------------CEEBCEEEECSS
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccccCCcc---------CceEEEEEEChh
Confidence 4688999999877 99999999974 88888886 58999866421000000 013566789999
Q ss_pred CcccCCeeEEEeCCE-EEEEEeCcC
Q 031937 113 NVEVDQIKASMENGV-LTVTVPKAE 136 (150)
Q Consensus 113 ~vd~~~i~A~~~~Gv-L~I~lpK~~ 136 (150)
.|+++..+.++.++. |.|+|.|++
T Consensus 73 ~Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 73 EIIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp CCCSSSEEEEECCC--CEEEEEECS
T ss_pred hccccccEEEECCCEEEEEEEEECC
Confidence 999999999998888 999999976
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=85.53 E-value=2 Score=26.52 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=28.7
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 031937 103 AFSRRFRLPENVEVDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~~ 136 (150)
.|.-.+.|| .++++.|+..+.+|.|+|..-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 577789999 789999999999999999997664
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=80.37 E-value=6 Score=24.74 Aligned_cols=33 Identities=24% Similarity=0.485 Sum_probs=28.6
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 031937 103 AFSRRFRLPENVEVDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~~ 136 (150)
.|.-.+.|| +++.+.|+..+.+|.|+|..-+..
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred EEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 466678999 789999999999999999987765
No 30
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=78.74 E-value=4 Score=25.25 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=28.8
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 031937 103 AFSRRFRLPENVEVDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~~ 136 (150)
.|.-.+.|| +++.+.|+..+.+|.|+|..-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 577789999 889999999999999999987654
No 31
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=77.95 E-value=10 Score=23.92 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=26.1
Q ss_pred eEEEEEEcC-CCCCCCeEEEEeCCeEEEEEEEEee
Q 031937 52 AHVFKADLP-GVKKEEVKVEVEDDRVLQISGQRKI 85 (150)
Q Consensus 52 ~~~l~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~ 85 (150)
.|.-.+.|| +++.+.++-++.+| .|+|+..+..
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~ 95 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGG-VLTVRFEKLR 95 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSS
T ss_pred EEEEEEECCCCcchhHcEEEEECC-EEEEEEEccC
Confidence 344477899 58999999999986 9999976643
No 32
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=77.31 E-value=11 Score=25.93 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=27.9
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 031937 103 AFSRRFRLPENVEVDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~~ 136 (150)
.|.-.+.|| +++.+.|+.++.+|.|+|+.-+..
T Consensus 67 ~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 67 HIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred EEEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 355568898 689999999999999999998765
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=76.86 E-value=4.6 Score=25.91 Aligned_cols=33 Identities=6% Similarity=0.186 Sum_probs=28.5
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 031937 103 AFSRRFRLPENVEVDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~~ 136 (150)
.|.-.+.|| +++.+.|+..+.+|.|+|..-+..
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 45 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHNE 45 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 577789999 789999999999999999986543
No 34
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=74.84 E-value=5.5 Score=25.23 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=28.7
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 031937 103 AFSRRFRLPENVEVDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~~ 136 (150)
.|.-.+.|| +++.+.|+.++.+|.|+|..-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 466779999 899999999999999999987754
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=73.48 E-value=7.5 Score=25.43 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=28.3
Q ss_pred eEEEEEECCCCcccCCeeEEEeC-CEEEEEEeCcC
Q 031937 103 AFSRRFRLPENVEVDQIKASMEN-GVLTVTVPKAE 136 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~~-GvL~I~lpK~~ 136 (150)
.|.-.+.|| +++.+.|+..+.+ |.|+|..-+..
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCC
T ss_pred EEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEec
Confidence 455668899 7899999999999 99999998765
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=64.41 E-value=18 Score=24.52 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=26.8
Q ss_pred eEEEEEECCCCcccCCeeEEEe-CCEEEEEEeCcC
Q 031937 103 AFSRRFRLPENVEVDQIKASME-NGVLTVTVPKAE 136 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~-~GvL~I~lpK~~ 136 (150)
.|.-.+.|| +++.+.|+..+. ++.|+|..-+..
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~ 87 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTK 87 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEcc
Confidence 355568899 789999999994 679999997765
No 37
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=63.91 E-value=5.3 Score=23.99 Aligned_cols=15 Identities=40% Similarity=0.477 Sum_probs=12.2
Q ss_pred CCeeEEEeCCEEEEE
Q 031937 117 DQIKASMENGVLTVT 131 (150)
Q Consensus 117 ~~i~A~~~~GvL~I~ 131 (150)
..|.|.|+||+|+-.
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 459999999998743
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=60.48 E-value=11 Score=26.59 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=28.3
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 031937 103 AFSRRFRLPENVEVDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~~ 136 (150)
.|.-.+.|| +++.+.|+.++.+|.|+|..-+..
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 466678899 889999999999999999987654
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=60.42 E-value=17 Score=23.21 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=15.4
Q ss_pred CCCeEEEEeCCeEEEEEEEE
Q 031937 64 KEEVKVEVEDDRVLQISGQR 83 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~ 83 (150)
|+.++|++++ +.++|+|.+
T Consensus 20 P~gV~V~i~~-~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEET-TEEEEEETT
T ss_pred CCCCEEEEeC-CEEEEECCC
Confidence 5788999985 699999763
No 40
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=52.78 E-value=36 Score=23.98 Aligned_cols=45 Identities=29% Similarity=0.564 Sum_probs=31.0
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCEEEEEEeC
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGVLTVTVPK 134 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK 134 (150)
|+.++|++++ +.++|+|.+ |...+.+ +.. ++...++|.|.|..+.
T Consensus 11 P~gV~V~i~~-~~VtVkGpk------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPK------------------GELTRTF--HPD-----MTITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEEC--CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEEc--CCC-----EEEEEeCCEEEEEcCC
Confidence 5788999985 699999763 3455444 543 4555789998887554
No 41
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=52.55 E-value=43 Score=24.40 Aligned_cols=46 Identities=20% Similarity=0.424 Sum_probs=31.0
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCEEEEEEeCc
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGVLTVTVPKA 135 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~ 135 (150)
++.++|++++ +.++|+|.+ |...+.+ +.. +....++|.|.|..+..
T Consensus 39 P~gV~V~i~~-~~VtVKGPk------------------G~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPK------------------GELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeC-CEEEEECCC------------------EEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 5788999985 689999764 3444444 433 44557899888876543
No 42
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.50 E-value=34 Score=24.33 Aligned_cols=45 Identities=29% Similarity=0.493 Sum_probs=29.6
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCEEEEEEe
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGVLTVTVP 133 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lp 133 (150)
|+.++|++++ +.++|+|.+ |...+.+.-| . ++...+++.|.|...
T Consensus 14 P~gV~v~i~~-~~V~VkGpk------------------G~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGPK------------------GELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESS-SEEEEECSS------------------CEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------eEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 4789999985 799999763 3444444212 2 445578898888753
No 43
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=47.15 E-value=44 Score=23.60 Aligned_cols=47 Identities=19% Similarity=0.406 Sum_probs=31.1
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCEEEEEEeCc
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGVLTVTVPKA 135 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~ 135 (150)
|+.++|++++ +.++|+|.+ |...+.+. +.. ++...++|.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpk------------------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDN------------------GSVTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 4788999985 699999763 34444441 333 45557899988875543
No 44
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=44.36 E-value=73 Score=21.69 Aligned_cols=75 Identities=16% Similarity=0.196 Sum_probs=48.1
Q ss_pred cccceeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCC
Q 031937 39 FVNTRVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQ 118 (150)
Q Consensus 39 ~~~p~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~ 118 (150)
...|.+.|.-.|+.|.--+-.|+ .+..++..|..+... +..|. -+..+++.+|.....++
T Consensus 33 ~~s~~~KIlS~DgtF~N~~m~~~-----------~~aiIt~yGtY~l~S---D~~Y~------E~i~kni~~p~~~g~~n 92 (142)
T 4gzv_A 33 KPSNTFKVLSDDGRIVNFTIIPG-----------ADAIITGYGTYKQLT---DDSYK------ESIEKNIHLPMLDNQDN 92 (142)
T ss_dssp EEEEEEEEECTTSEEEEEECCTT-----------SCCEEEEEEEEEEEE---TTEEE------EEEEEESSSGGGTTEEE
T ss_pred eecCceEEECCCCcEEEEEEeCC-----------CCcEEEEeEEEEecC---CCeee------eeecccccCccccCCcc
Confidence 45678889988888866664554 223455555544322 22222 25778888897776655
Q ss_pred -eeEEE-eCCEEEEEEe
Q 031937 119 -IKASM-ENGVLTVTVP 133 (150)
Q Consensus 119 -i~A~~-~~GvL~I~lp 133 (150)
++-++ .|++|.|..-
T Consensus 93 ~L~fe~~~dn~l~lsy~ 109 (142)
T 4gzv_A 93 ILEFEIKDNDYLHLKYF 109 (142)
T ss_dssp EEEEEEETTTEEEEEEE
T ss_pred EEEEEEccCCEEEEEEE
Confidence 77777 6889988873
No 45
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=41.20 E-value=16 Score=23.56 Aligned_cols=18 Identities=33% Similarity=0.610 Sum_probs=15.1
Q ss_pred CeeEEEeCCEEEEEEeCc
Q 031937 118 QIKASMENGVLTVTVPKA 135 (150)
Q Consensus 118 ~i~A~~~~GvL~I~lpK~ 135 (150)
.+.+.+.+|||+|+++..
T Consensus 29 d~D~e~~~gVLti~f~~~ 46 (106)
T 1ew4_A 29 DIDCEINGGVLTITFENG 46 (106)
T ss_dssp CCEEEEETTEEEEECTTS
T ss_pred CEeeeccCCEEEEEECCC
Confidence 478889999999999743
No 46
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=39.32 E-value=76 Score=22.32 Aligned_cols=44 Identities=25% Similarity=0.493 Sum_probs=30.0
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCEEEEEEe
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGVLTVTVP 133 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lp 133 (150)
|+.++|++++ +.++|+|.+ |...+. |+.. ++...+++.|.|...
T Consensus 12 P~gV~v~i~~-~~v~VkGpk------------------G~L~~~--~~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPK------------------GELEVP--VSPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECSS------------------CEEEEE--CCTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeCC------------------cEEEEE--eCCC-----EEEEEECCEEEEEEC
Confidence 5789999985 699999763 344444 4433 444567898888753
No 47
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=37.98 E-value=48 Score=21.75 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=23.0
Q ss_pred eEEEEEECCCCcccCCeeEEEeCCEEEEEE
Q 031937 103 AFSRRFRLPENVEVDQIKASMENGVLTVTV 132 (150)
Q Consensus 103 ~f~r~i~LP~~vd~~~i~A~~~~GvL~I~l 132 (150)
...-+|.||.+++..++...+...-|.|.+
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 455678999999999999999999999987
No 48
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=37.25 E-value=1e+02 Score=21.89 Aligned_cols=46 Identities=24% Similarity=0.360 Sum_probs=30.1
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEE--eCCEEEEEEeC
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASM--ENGVLTVTVPK 134 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~--~~GvL~I~lpK 134 (150)
|+.++|++.+ +.++|+|.+ |...|. |+. ..++..+ +++.|.|....
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------------------G~L~~~--~~~----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPR------------------GKLTRN--FKH----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEE--CCC----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------ceEEEE--ccC----CcEEEEEEcCCCEEEEEECC
Confidence 5789999985 799999763 344444 331 1244456 78888887653
No 49
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=36.29 E-value=1.3e+02 Score=22.13 Aligned_cols=65 Identities=9% Similarity=0.180 Sum_probs=39.2
Q ss_pred EcCCCCCCCeEEEEe-CCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCEEEEE
Q 031937 58 DLPGVKKEEVKVEVE-DDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGVLTVT 131 (150)
Q Consensus 58 ~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~GvL~I~ 131 (150)
.|||+..+==-+.++ +++.|.+.... ......-... |...|+++|...-|.+.|... .+|.+.|.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~-------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINK-------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEET-------TEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECC-------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEEE
Confidence 589998753336665 23566654321 2333333333 788999999877788877653 66655553
No 50
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=33.53 E-value=1.1e+02 Score=23.57 Aligned_cols=48 Identities=25% Similarity=0.367 Sum_probs=29.7
Q ss_pred CCCCeEEEEeCCeEEEEEEEEeeecc--CC--CceEE-------EE--eeeeeeEEEEEECCCC
Q 031937 63 KKEEVKVEVEDDRVLQISGQRKIEKE--DR--NDTWH-------RV--ERSSGAFSRRFRLPEN 113 (150)
Q Consensus 63 ~~edi~V~v~~~~~L~I~g~~~~~~~--~~--~~~~~-------~~--e~~~g~f~r~i~LP~~ 113 (150)
+++++.|+ +| .|+|++.+..... .. ...|. .+ ...+|.|+-++.||..
T Consensus 85 ~~~Nv~v~--dG-~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSVK--KG-CLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEEE--TT-EEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEEE--CC-EEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 55666554 66 8999998764311 11 01232 22 2567899999999975
No 51
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=33.44 E-value=82 Score=20.30 Aligned_cols=36 Identities=6% Similarity=0.178 Sum_probs=26.6
Q ss_pred EEEcCCeEEEEEEc-CCCCCCCeEEEEeCCeEEEEEEEE
Q 031937 46 WKETPEAHVFKADL-PGVKKEEVKVEVEDDRVLQISGQR 83 (150)
Q Consensus 46 v~e~~~~~~l~~~l-PG~~~edi~V~v~~~~~L~I~g~~ 83 (150)
+.+.++.+.|.+.+ ||.+++.|. .+.+ ..|.|.-.-
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~-~~LkV~v~A 44 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHG-DEVKVAITA 44 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECS-SCEEEECCC
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccC-CEEEEEEec
Confidence 46678889999988 999999874 4554 467777443
No 52
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=32.10 E-value=1.2e+02 Score=21.46 Aligned_cols=46 Identities=24% Similarity=0.576 Sum_probs=30.1
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEE-EeCCEEEEEEeC
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKAS-MENGVLTVTVPK 134 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~-~~~GvL~I~lpK 134 (150)
|+.++|++.+ +.++|+|.+ |...+. |+. + .+... .++|.|.|....
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------------------G~L~~~--~~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPR------------------GTLTKN--LKH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEE--CTT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------eEEEEE--ccC-C---cEEEEEecCCeEEEEECC
Confidence 5789999985 799999763 344444 442 1 23444 468888887653
No 53
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=32.03 E-value=33 Score=22.79 Aligned_cols=16 Identities=25% Similarity=0.619 Sum_probs=14.1
Q ss_pred eeEEEeCCEEEEEEeC
Q 031937 119 IKASMENGVLTVTVPK 134 (150)
Q Consensus 119 i~A~~~~GvL~I~lpK 134 (150)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7888999999999974
No 54
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=28.63 E-value=76 Score=20.47 Aligned_cols=31 Identities=16% Similarity=0.364 Sum_probs=25.9
Q ss_pred eEEEEEECCCCc-ccCCeeEEEeCCEEEEEEe
Q 031937 103 AFSRRFRLPENV-EVDQIKASMENGVLTVTVP 133 (150)
Q Consensus 103 ~f~r~i~LP~~v-d~~~i~A~~~~GvL~I~lp 133 (150)
...-+|.||..+ +.+++...+...-|.|.+.
T Consensus 30 ~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 30 DLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp EEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 455678999888 8899999999999999873
No 55
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=27.98 E-value=38 Score=22.65 Aligned_cols=17 Identities=35% Similarity=0.542 Sum_probs=14.6
Q ss_pred CCeeEEEeCCEEEEEEe
Q 031937 117 DQIKASMENGVLTVTVP 133 (150)
Q Consensus 117 ~~i~A~~~~GvL~I~lp 133 (150)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45788899999999995
No 56
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=27.49 E-value=28 Score=20.68 Aligned_cols=35 Identities=11% Similarity=0.314 Sum_probs=27.2
Q ss_pred EEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEE
Q 031937 45 DWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQI 79 (150)
Q Consensus 45 dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I 79 (150)
.|.+..+.|.|++++=|+....|.+.-.+|..+.|
T Consensus 7 tWtDrtG~F~VeA~flg~~dgki~LhK~nGv~I~V 41 (68)
T 2hbp_A 7 LWVDRSGTFKVDAEFIGCAKGKIHLHKANGVKIAV 41 (68)
T ss_dssp EEEBSSSCCEEEEEEEEEETTEEEEECTTSCEEEE
T ss_pred EEEcCCCCeEEEEEEEEEeCCEEEEEecCCcEEEe
Confidence 46677889999999999988888888777644443
No 57
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=27.15 E-value=1e+02 Score=22.50 Aligned_cols=44 Identities=25% Similarity=0.302 Sum_probs=24.7
Q ss_pred EEEeCCeEEEEEEEEeeecc--CCCceEEE---EeeeeeeEEEEEECCCC
Q 031937 69 VEVEDDRVLQISGQRKIEKE--DRNDTWHR---VERSSGAFSRRFRLPEN 113 (150)
Q Consensus 69 V~v~~~~~L~I~g~~~~~~~--~~~~~~~~---~e~~~g~f~r~i~LP~~ 113 (150)
|.+.+| .|+|++.+..... -..+++.. ....+|.|+-++.||..
T Consensus 49 v~v~~G-~L~i~~~~~~~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGGG-VLIIEARRESYEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEETT-EEEEEEEEEEETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEECC-EEEEEEEeccCCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 344565 7999987653110 00111211 12467889999999964
No 58
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=27.10 E-value=1.5e+02 Score=20.09 Aligned_cols=75 Identities=15% Similarity=0.198 Sum_probs=49.8
Q ss_pred Ccccc--eeEEEEcCCeEEEEEEcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcc
Q 031937 38 AFVNT--RVDWKETPEAHVFKADLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVE 115 (150)
Q Consensus 38 ~~~~p--~~dv~e~~~~~~l~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd 115 (150)
....| .+.|.-.|+.|...+-.|| .+-.++..|...... +..| .-+.++++.+|.-..
T Consensus 30 g~L~psn~lKIlSdDgtF~Ni~m~~~-----------~~aiIt~~GtY~~~S---D~~Y------~E~IeKni~lp~l~g 89 (142)
T 4i95_A 30 GVLKPSNTFKVLSDDGRIVNFTIRPG-----------TDAIITGYGTYRQIS---AAAY------KESIEKNIHLPMLDN 89 (142)
T ss_dssp CEEEEEEEEEEECTTSEEEEEECCTT-----------SCCEEEEEEEEEEEE---TTEE------EEEEEEESSSGGGTT
T ss_pred eEeccCccEEEEcCCCcEEEEEEecC-----------CCcEEEEeEEEEecC---Ccce------eeeecccccCcccCC
Confidence 34456 7888888888887776665 234666666655432 2222 225778888997665
Q ss_pred cCC-eeEEE-eCCEEEEEE
Q 031937 116 VDQ-IKASM-ENGVLTVTV 132 (150)
Q Consensus 116 ~~~-i~A~~-~~GvL~I~l 132 (150)
.++ ++-++ .||+|.|..
T Consensus 90 ~~N~l~fE~~~dnlm~lky 108 (142)
T 4i95_A 90 KDNILEFEMGAGGVMYLKY 108 (142)
T ss_dssp EEEEEEEEECSTTEEEEEE
T ss_pred CccEEEEEEccCCEEEEEE
Confidence 544 78888 788999988
No 59
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=25.78 E-value=99 Score=21.98 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=31.8
Q ss_pred EcCCCCCCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCE---EEEEEeC
Q 031937 58 DLPGVKKEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGV---LTVTVPK 134 (150)
Q Consensus 58 ~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~Gv---L~I~lpK 134 (150)
..|=-=|+.++|++++ +.++|+|.+ |...+. |+.. .+....++|. |.|..+.
T Consensus 7 k~pI~IP~gV~V~i~~-~~VtVkGpk------------------G~L~~~--~~~~----~v~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 7 NQTVDIPENVDITLKG-RTVIVKGPR------------------GTLRRD--FNHI----NVELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp ---CCCCTTCEEEEET-TEEEEEETT------------------EEEEEE--CCSS----SCEEEEETTTTCEEEEECSC
T ss_pred cCcEEcCCCCEEEEeC-CEEEEECCC------------------eEEEEE--eCCC----CEEEEEecCceeEEEEEcCC
Confidence 3344447889999985 699999863 344443 4431 3455567887 7776544
No 60
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=24.48 E-value=35 Score=25.07 Aligned_cols=46 Identities=26% Similarity=0.453 Sum_probs=29.6
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCEEEEEEeC
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGVLTVTVPK 134 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK 134 (150)
|+.++|++++ +.++|+|.+ |...+. |+..++.. ..++|.|.|..+.
T Consensus 54 P~gV~V~i~~-~~VtVKGPk------------------G~L~~~--~~~~v~i~----~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGPL------------------GELALT--YPREVELT----KEESGFLRVKKTV 99 (223)
T ss_dssp STTSCEEESS-SEEEECCSS------------------CCEEEE--CCSSCEEE----ECSSSCEEEECSS
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEE--cCCCEEEE----EecCCEEEEEcCC
Confidence 5788899985 689999763 344443 45544330 4578888877554
No 61
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=24.10 E-value=45 Score=19.88 Aligned_cols=21 Identities=29% Similarity=0.512 Sum_probs=17.3
Q ss_pred CCCCCeEEEEeCCeEEEEEEEE
Q 031937 62 VKKEEVKVEVEDDRVLQISGQR 83 (150)
Q Consensus 62 ~~~edi~V~v~~~~~L~I~g~~ 83 (150)
|+.+.|.+....| .|.|+|+.
T Consensus 18 Fd~e~i~L~T~~G-~L~IkG~~ 38 (71)
T 2ks0_A 18 FDPKEILLETIQG-VLSIKGEK 38 (71)
T ss_dssp ECSSEEEEEETTE-EEEEEEEC
T ss_pred ECCCEEEEEeCce-EEEEEcCC
Confidence 6788888888875 89999985
No 62
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=23.09 E-value=34 Score=20.78 Aligned_cols=15 Identities=13% Similarity=0.488 Sum_probs=12.4
Q ss_pred cCCeeEEEeCCEEEE
Q 031937 116 VDQIKASMENGVLTV 130 (150)
Q Consensus 116 ~~~i~A~~~~GvL~I 130 (150)
.++=++.+++|||+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 456789999999987
No 63
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=22.09 E-value=1.9e+02 Score=21.41 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=24.3
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEE-EEeeeeeeEEEEEECCCC
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWH-RVERSSGAFSRRFRLPEN 113 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~-~~e~~~g~f~r~i~LP~~ 113 (150)
++++.| ++| .|+|++.+. .+..+. .....+|.|+-++.||..
T Consensus 32 ~~Nv~v--~~G-~L~L~~~k~-----tsa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 32 PQHQRV--DQG-SLTIWLDST-----SGSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp GGGEEE--ETT-EEEEEECSS-----CCEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCEEE--ECC-EEEEEEecC-----CCCEEEECceEeeEEEEEEEEeCCC
Confidence 445544 455 477765432 122222 234568899999999964
No 64
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=21.88 E-value=1.7e+02 Score=19.18 Aligned_cols=29 Identities=21% Similarity=0.459 Sum_probs=18.1
Q ss_pred CeeEEE---eCCEEEEEEeCcCcccCCCceEEecC
Q 031937 118 QIKASM---ENGVLTVTVPKAEEAKKSNVRAVQIS 149 (150)
Q Consensus 118 ~i~A~~---~~GvL~I~lpK~~~~~~~~~~~I~I~ 149 (150)
+|+.+| .||+|.|++--.. ..+...|.|+
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~---tg~~~~i~i~ 130 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKN---SGKEQKITIK 130 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETT---TCCEEEEEEE
T ss_pred EEEEEEEECCCCEEEEEEEECC---CCCEEEEEEe
Confidence 566666 5999999985333 2333556554
No 65
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=21.22 E-value=65 Score=21.24 Aligned_cols=27 Identities=7% Similarity=0.112 Sum_probs=22.0
Q ss_pred cCCCCCCCeEEEEeCCeEEEEEEEEeee
Q 031937 59 LPGVKKEEVKVEVEDDRVLQISGQRKIE 86 (150)
Q Consensus 59 lPG~~~edi~V~v~~~~~L~I~g~~~~~ 86 (150)
.|.+.+-.|.|.+++| .++++|.....
T Consensus 2 ~~~~~p~~i~V~v~~G-~VTLsG~Vp~~ 28 (132)
T 2kgs_A 2 ASALSLSLLSISRSGN-TVTLIGDFPDE 28 (132)
T ss_dssp CCCCCEEEEEEEECSS-EEEEEEEESCH
T ss_pred CCcccceeEEEEEECC-EEEEEEECCCH
Confidence 3667777899999986 89999998754
No 66
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=20.92 E-value=61 Score=22.75 Aligned_cols=43 Identities=23% Similarity=0.474 Sum_probs=28.7
Q ss_pred CCCeEEEEeCCeEEEEEEEEeeeccCCCceEEEEeeeeeeEEEEEECCCCcccCCeeEEEeCCEEEEEE
Q 031937 64 KEEVKVEVEDDRVLQISGQRKIEKEDRNDTWHRVERSSGAFSRRFRLPENVEVDQIKASMENGVLTVTV 132 (150)
Q Consensus 64 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~vd~~~i~A~~~~GvL~I~l 132 (150)
|+.++|++++ +.++|+|.+ |...+. |+.. ++...+++.|.|..
T Consensus 11 P~gV~v~i~~-~~V~VkGpk------------------G~L~~~--~~~~-----v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGKN------------------GELTRT--LNDA-----VEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESS-SEEECCBTT------------------BCCEEE--CCSS-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------EEEEEE--CCCC-----EEEEEeCCEEEEEE
Confidence 5788888875 788888763 334444 4543 44557889888873
No 67
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=20.49 E-value=1.4e+02 Score=19.16 Aligned_cols=27 Identities=15% Similarity=0.070 Sum_probs=13.5
Q ss_pred EEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 031937 105 SRRFRLPENVEVDQIKASMENGVLTVTVPKAE 136 (150)
Q Consensus 105 ~r~i~LP~~vd~~~i~A~~~~GvL~I~lpK~~ 136 (150)
.|++..| --++|.++|.+|.|.+.+.-
T Consensus 22 ~RSI~~~-----iPi~A~id~~~L~I~F~~~~ 48 (108)
T 3d33_A 22 IRSAATN-----CPITVFTDGYLLTLKNASPD 48 (108)
T ss_dssp ------C-----CSEEEEEETTEEEEEESSCC
T ss_pred ccccCCC-----CCcEEEEECCEEEEEECCcC
Confidence 4666532 22567777888888885443
Done!