BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031938
(150 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 48 RRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAI 107
RRQK + + ++D ++ + LG VK E PRI+ + +S EE + ++ +
Sbjct: 285 RRQKRLFCR------YYDGNRNPRYI-LGPVKQEDEWDKPRIVRFLDIISDEEIETVKEL 337
Query: 108 ARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLS 139
A+P L +TV D +TGK ++ R S +LS
Sbjct: 338 AKPRLSRATVHDPETGKLTTAHYRVSKSAWLS 369
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLS 139
PRI+ H+ +S E + ++ +A+P L +TV D +TGK + R S +LS
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLS 387
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 86 SPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKY 145
SP I+ ++ +S EE + ++ IA+P L +TV D KTG ++ R S +L EE
Sbjct: 337 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDD 394
Query: 146 PMI 148
P++
Sbjct: 395 PVV 397
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 86 SPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKY 145
SP I+ ++ +S EE + ++ IA+P L +TV D KTG ++ R S +L EE
Sbjct: 335 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDD 392
Query: 146 PMI 148
P++
Sbjct: 393 PVV 395
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 56 QLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVS 115
Q+P ++ + A LL L ++ EVI P I + H+F+S E +R +A P LQ S
Sbjct: 316 QIPSLYCSYETNSNAYLL-LQPIRKEVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRS 374
Query: 116 TVVDTKTGKGIKSNVRTSSGMFL 138
V + K ++ R S +L
Sbjct: 375 VVASGE--KQLQVEYRISKSAWL 395
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 48 RRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAI 107
RRQK + + + D ++ LL + K E SP I+ ++ +S EE + ++ +
Sbjct: 305 RRQKRLFCR------YHDGNRNPHLL-IAPFKEEDEWDSPHIVRYYDVMSDEEIEKIKQL 357
Query: 108 ARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMI 148
A+P L +TV D KTG ++ R S +L EE P++
Sbjct: 358 AKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDDPVV 396
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 36.2 bits (82), Expect = 0.078, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 54 YLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQ 113
+ Q+P ++ + LL L + EVI P + + H+F+S EE +R +A P LQ
Sbjct: 314 HYQIPSLYCSYETNSSPYLL-LQPARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQ 372
Query: 114 VSTVVDTKTGKGIKSNVRTSSGMFL 138
S V + K ++ R S +L
Sbjct: 373 RSVVASGE--KQLQVEYRISKSAWL 395
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 35.8 bits (81), Expect = 0.10, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 73 LRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTV 117
L L V+ EVI P +++ H+F+S E +R +A P LQ S V
Sbjct: 332 LLLQPVRKEVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVV 376
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 54 YLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQ 113
+ Q+P ++ + LL L + EV+ P I + H+F+S EE +R +A P LQ
Sbjct: 312 HYQIPSLYCSYETNSSPYLL-LQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQ 370
Query: 114 VSTVVDTKTGKGIKSNVRTSSGMFL 138
S V + K ++ R S +L
Sbjct: 371 RSVVASGE--KQLQVEYRISKSAWL 393
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 78 VKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMF 137
+K E+ ++P ++ + +S +E ++ +A+P L +TV D+ TGK + + R S +
Sbjct: 319 IKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAW 378
Query: 138 L 138
L
Sbjct: 379 L 379
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLS 139
PRI+ H+ +S E + ++ +A+P L+ +T+ + TG + R S +LS
Sbjct: 335 PRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLS 387
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLS 139
PRI+ H+ +S E + ++ +A+P L+ +T+ + TG + R S +LS
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLS 387
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLS 139
PRI+ H+ +S E + ++ +A+P L+ +T+ + TG + R S +LS
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLS 387
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLS 139
PRI+ H+ +S E + ++ +A+P L+ +T+ + TG + R S +LS
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLS 387
>sp|Q5RK27|S12A7_RAT Solute carrier family 12 member 7 OS=Rattus norvegicus GN=Slc12a7
PE=2 SV=2
Length = 1083
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 25/112 (22%)
Query: 16 FVTFGMII-GALFQLAFIRKLEDSYGTDFPSFMRRQKNGYLQLPRGVTFWDNDKEAELLR 74
+ F M+I G +++ R E +G RG++ N LLR
Sbjct: 637 YALFAMLIAGCIYKYIEYRGAEKEWGDGI---------------RGLSL--NAARYALLR 679
Query: 75 LGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGI 126
+ + P +W P++LV+ N L E+C + P L +S K GKG+
Sbjct: 680 VEHGPPHTKNWRPQVLVMLN-LDSEQC-----VKHPRL-LSFTSQLKAGKGL 724
>sp|Q9WVL3|S12A7_MOUSE Solute carrier family 12 member 7 OS=Mus musculus GN=Slc12a7 PE=1
SV=1
Length = 1083
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 25/112 (22%)
Query: 16 FVTFGMII-GALFQLAFIRKLEDSYGTDFPSFMRRQKNGYLQLPRGVTFWDNDKEAELLR 74
+ F M+I G +++ R E +G RG++ N LLR
Sbjct: 637 YALFAMLIAGCIYKYIEYRGAEKEWGDGI---------------RGLSL--NAARYALLR 679
Query: 75 LGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGI 126
+ + P +W P++LV+ N L E+C + P L +S K GKG+
Sbjct: 680 VEHGPPHTKNWRPQVLVMLN-LDSEQC-----VKHPRL-LSFTSQLKAGKGL 724
>sp|Q6KHP2|GLGA_MYCMO Glycogen synthase OS=Mycoplasma mobile (strain ATCC 43663 / 163K /
NCTC 11711) GN=glgA PE=3 SV=1
Length = 476
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 44 PSFMRRQKNGYLQLPRGVTFW--DNDKEAELLRLGYVKPEVI---SWSPRILVLHNFLSM 98
PSF ++ YL L TF+ N ++ L L KPE+I W IL L FLS
Sbjct: 90 PSFKNIERTAYLDLHENSTFYLIFNKAISKFLELSAFKPEIIHANDWHTGILPL--FLSG 147
Query: 99 EE 100
E+
Sbjct: 148 EK 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,099,412
Number of Sequences: 539616
Number of extensions: 2164071
Number of successful extensions: 5780
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5766
Number of HSP's gapped (non-prelim): 19
length of query: 150
length of database: 191,569,459
effective HSP length: 107
effective length of query: 43
effective length of database: 133,830,547
effective search space: 5754713521
effective search space used: 5754713521
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)