BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031939
MDDTTWEQKLQALTHVLTSPTNSPPLHSQLFVSSQIPCYLNWDYPPVFCTKFRYIHWRWG
LSLFLRRVSRFGLPQTSWRSKCPYQQPPPLTLAKGVEEAKWGDEEKREYVRKRLQRKRLG
CHVNPLIPILVPNLLLFSLFFWDPFAANGS

High Scoring Gene Products

Symbol, full name Information P value
AT2G33855 protein from Arabidopsis thaliana 1.1e-37

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031939
        (150 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955963 - symbol:AT2G33855 "AT2G33855" speci...   404  1.1e-37   1


>TAIR|locus:504955963 [details] [associations]
            symbol:AT2G33855 "AT2G33855" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:BT024682
            IPI:IPI00538020 RefSeq:NP_850223.2 UniGene:At.47137
            EnsemblPlants:AT2G33855.1 GeneID:817955 KEGG:ath:AT2G33855
            TAIR:At2g33855 eggNOG:NOG273494 HOGENOM:HOG000083873
            InParanoid:Q29Q74 OMA:HILTNPT PhylomeDB:Q29Q74
            ProtClustDB:CLSN2681247 Genevestigator:Q29Q74 Uniprot:Q29Q74
        Length = 144

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 76/145 (52%), Positives = 96/145 (66%)

Query:     1 MDDTTWEQKLQALTHVLTSPTNSPPLHSQLFVSSQIPCYLNWDYPPVFC-TKFRYIHWRW 59
             M++TTW Q++QA+TH+LT+PT  P L+SQ F+ + IP Y++WDYPPV+  T  R    +W
Sbjct:     1 MEETTWGQRIQAVTHILTNPTTKPSLYSQFFIGAIIPNYVSWDYPPVYSPTHLR----QW 56

Query:    60 GLSLFLRRVSRFGLPQTSWRSKCPYQQPPPLTLAKGVEEAKWGDEEKREYVRKRLQRKRL 119
              +S F +RVSRFGLP TSWRS  PY QPP   +A GVEE KWG EE+REY RKRL+RKRL
Sbjct:    57 WVSQFFKRVSRFGLPDTSWRSNSPYYQPPAAVMAVGVEEGKWGKEERREYARKRLRRKRL 116

Query:   120 GCHXXXXXXXXXXXXXXFSLFFWDP 144
                              F+L  WDP
Sbjct:   117 VNEVNPYIPLLVPNLLLFTLLLWDP 141


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.482    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      150       136   0.00091  102 3  12 22  0.39    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  567 (60 KB)
  Total size of DFA:  130 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.50u 0.13s 10.63t   Elapsed:  00:00:01
  Total cpu time:  10.50u 0.13s 10.63t   Elapsed:  00:00:01
  Start:  Fri May 10 07:48:18 2013   End:  Fri May 10 07:48:19 2013

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