Query 031947
Match_columns 150
No_of_seqs 119 out of 197
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 11:56:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031947.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031947hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a90_A Deltex protein; WWE dom 94.9 0.055 1.9E-06 44.8 6.5 61 67-130 68-149 (240)
2 3v3l_A E3 ubiquitin-protein li 93.8 0.067 2.3E-06 37.3 4.0 28 94-122 6-33 (85)
3 1ujr_A Hypothetical protein AK 89.8 0.27 9.1E-06 36.1 3.5 28 94-122 31-58 (110)
4 2dk6_A PARP11 protein; structu 84.5 0.47 1.6E-05 34.2 2.1 29 93-121 20-55 (102)
5 2a90_A Deltex protein; WWE dom 77.1 2 6.8E-05 35.5 3.7 30 93-123 26-55 (240)
6 1x4r_A PARP14 protein; WWE dom 63.6 5.7 0.0002 28.8 3.2 28 94-122 28-55 (99)
7 1x4r_A PARP14 protein; WWE dom 52.3 17 0.00057 26.3 4.0 34 57-92 56-89 (99)
8 2ra9_A Uncharacterized protein 24.8 39 0.0013 25.9 2.3 39 77-124 15-55 (150)
9 2vof_B BCL-2-binding component 24.1 34 0.0012 19.3 1.3 9 15-23 3-11 (26)
10 2yj1_B Alpha-beta-PUMA BH3 fol 19.2 30 0.001 19.6 0.4 9 15-23 1-9 (26)
No 1
>2a90_A Deltex protein; WWE domain, metal binding protein; 2.15A {Drosophila melanogaster} SCOP: d.289.1.1 d.289.1.1
Probab=94.91 E-value=0.055 Score=44.82 Aligned_cols=61 Identities=18% Similarity=0.112 Sum_probs=46.0
Q ss_pred ceeEEecCCeeeeeeecCCC-----CcceEee------------eeeeeC---C-CCceeeCCHHHHHHHHHHHhccccc
Q 031947 67 GLYEVDLVRRHCFPVYWNGD-----NRRVLRG------------HWFARK---G-GLDWLPIREDVAEQLEIAYRSQVWH 125 (150)
Q Consensus 67 gLydVdl~~r~~~PVYW~g~-----~~eVrRG------------tWF~~~---~-~~~~~Pl~e~lA~~LE~~Y~~~~W~ 125 (150)
+.|-||+.+|...--= .|. ...|||- .|+..+ + .+.|.||+..++..||.+|..+.
T Consensus 68 ~~y~IDf~sMtQ~~~d-tg~~~~~~~r~VRR~~~~PsS~~g~g~vWeW~d~~~D~~G~W~~Y~~~vs~~IE~Ay~~g~-- 144 (240)
T 2a90_A 68 EQYYVNVRTMTQESEA-ETAGSGLLTIGVRRMFYAPSSPAGKGTKWEWSGGSADSNNDWRPYNMHVQSIIEDAWARGE-- 144 (240)
T ss_dssp TTCEEETTTTEEEC----------CCCBEEEEEECTTSHHHHTEEEEEECSSSSCCSSEEECCHHHHHHHHHHHHTTC--
T ss_pred CceEEeccccEEEeec-cCccccccceeeeeccccCCCcCCCccEEEEeCCCCCCCCceEECCHHHHHHHHHHHhcCC--
Confidence 7799999999875422 555 7899993 788876 3 36899999999999999999764
Q ss_pred ccccc
Q 031947 126 RRTFN 130 (150)
Q Consensus 126 ~~l~~ 130 (150)
..+.+
T Consensus 145 ~~v~L 149 (240)
T 2a90_A 145 QTLDL 149 (240)
T ss_dssp SEEEH
T ss_pred Cccee
Confidence 44655
No 2
>3v3l_A E3 ubiquitin-protein ligase RNF146; HET: V3L; 1.65A {Homo sapiens}
Probab=93.76 E-value=0.067 Score=37.30 Aligned_cols=28 Identities=21% Similarity=0.526 Sum_probs=24.7
Q ss_pred eeeeeCCCCceeeCCHHHHHHHHHHHhcc
Q 031947 94 HWFARKGGLDWLPIREDVAEQLEIAYRSQ 122 (150)
Q Consensus 94 tWF~~~~~~~~~Pl~e~lA~~LE~~Y~~~ 122 (150)
.||+.+++ .|.+|++.++..||++|..+
T Consensus 6 ~W~w~~~~-GW~~Yd~~~s~~IE~af~~~ 33 (85)
T 3v3l_A 6 AWYYEGRN-GWWQYDERTSRELEDAFSKG 33 (85)
T ss_dssp EEEEECSS-SEEECCHHHHHHHHHHHHTT
T ss_pred EEEEeCCC-CceeCCHHHHHHHHHHHHhC
Confidence 59998654 59999999999999999875
No 3
>1ujr_A Hypothetical protein AK012080; WWE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.289.1.1
Probab=89.81 E-value=0.27 Score=36.10 Aligned_cols=28 Identities=21% Similarity=0.526 Sum_probs=24.5
Q ss_pred eeeeeCCCCceeeCCHHHHHHHHHHHhcc
Q 031947 94 HWFARKGGLDWLPIREDVAEQLEIAYRSQ 122 (150)
Q Consensus 94 tWF~~~~~~~~~Pl~e~lA~~LE~~Y~~~ 122 (150)
.||+.+++ .|.+|++.++..||++|..+
T Consensus 31 ~W~w~gd~-GW~~Yd~~~s~~IE~Ay~~g 58 (110)
T 1ujr_A 31 AWYYEGRN-GWWQYDERTSRELEDAFSKG 58 (110)
T ss_dssp EEEEECSS-SEEECCSHHHHHHHHHHHHT
T ss_pred EEEEeCCC-CCccCCHHHHHHHHHHHHcC
Confidence 69997654 69999999999999999964
No 4
>2dk6_A PARP11 protein; structural genomics, WWE domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.52 E-value=0.47 Score=34.17 Aligned_cols=29 Identities=21% Similarity=0.474 Sum_probs=24.6
Q ss_pred eeeeeeCCCCceeeCCHHH-------HHHHHHHHhc
Q 031947 93 GHWFARKGGLDWLPIREDV-------AEQLEIAYRS 121 (150)
Q Consensus 93 GtWF~~~~~~~~~Pl~e~l-------A~~LE~~Y~~ 121 (150)
-.||+.++.+.|.||..++ +..||.+|+.
T Consensus 20 w~W~W~de~G~W~~Y~~~~~~~~sv~S~~IE~ay~~ 55 (102)
T 2dk6_A 20 WGWFYLAECGKWHMFQPDTNSQCSVSSEDIEKSFKT 55 (102)
T ss_dssp EEEEECCSSSCCEECCCBSSTTCBCCHHHHHHHHHH
T ss_pred EEEEEECCCCceeECCccccccccccHHHHHHHHhh
Confidence 3599976666899999866 8999999997
No 5
>2a90_A Deltex protein; WWE domain, metal binding protein; 2.15A {Drosophila melanogaster} SCOP: d.289.1.1 d.289.1.1
Probab=77.11 E-value=2 Score=35.47 Aligned_cols=30 Identities=27% Similarity=0.464 Sum_probs=25.2
Q ss_pred eeeeeeCCCCceeeCCHHHHHHHHHHHhccc
Q 031947 93 GHWFARKGGLDWLPIREDVAEQLEIAYRSQV 123 (150)
Q Consensus 93 GtWF~~~~~~~~~Pl~e~lA~~LE~~Y~~~~ 123 (150)
..|.+.++ ++|.||+..+++.||++|.+..
T Consensus 26 ~vWEwqd~-g~W~pYs~~v~~~IE~a~~~~~ 55 (240)
T 2a90_A 26 SVWEFESR-GKWLPYSPAVSQHLERAHAKKL 55 (240)
T ss_dssp EEEEEEET-TEEEECCHHHHHHHHHHHHTTC
T ss_pred EEEEEecC-CeEeeCCHHHHHHHHHHhcCCC
Confidence 56777655 5999999999999999998644
No 6
>1x4r_A PARP14 protein; WWE domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=63.61 E-value=5.7 Score=28.75 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=24.1
Q ss_pred eeeeeCCCCceeeCCHHHHHHHHHHHhcc
Q 031947 94 HWFARKGGLDWLPIREDVAEQLEIAYRSQ 122 (150)
Q Consensus 94 tWF~~~~~~~~~Pl~e~lA~~LE~~Y~~~ 122 (150)
.|-|.+ +++|.|++.-...+||++|+.+
T Consensus 28 eWqY~d-~~~~~~FDk~TNl~LEeA~~~k 55 (99)
T 1x4r_A 28 EWQYID-KNITQCFDKMTNMKLEVAWKAK 55 (99)
T ss_dssp EEEEEC-SSCEEECCTTHHHHHHHHHHTT
T ss_pred EEEEeC-CCeEeechHHHHHHHHHHHHcc
Confidence 499965 5589999999999999999864
No 7
>1x4r_A PARP14 protein; WWE domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=52.31 E-value=17 Score=26.28 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=28.4
Q ss_pred CceeeEEecCceeEEecCCeeeeeeecCCCCcceEe
Q 031947 57 EERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLR 92 (150)
Q Consensus 57 ~~~~~V~V~ggLydVdl~~r~~~PVYW~g~~~eVrR 92 (150)
.+.+.|.++|..|.|||.++...- =.|..+.|+|
T Consensus 56 k~~v~VkI~~~~y~Vdl~t~~A~~--~~G~~~~v~R 89 (99)
T 1x4r_A 56 KKDTVVQIHNQDFTVDLSTNTATA--PQGQTFTVQR 89 (99)
T ss_dssp CSEEEEEETTEEEEEETTTTEEEC--TTSCEEEEEE
T ss_pred CCceEEEECCEEEEEEcCcceeec--CCCCEEEEEE
Confidence 567778899999999999988776 5677888888
No 8
>2ra9_A Uncharacterized protein DUF1285; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Shewanella baltica}
Probab=24.79 E-value=39 Score=25.88 Aligned_cols=39 Identities=8% Similarity=0.063 Sum_probs=21.5
Q ss_pred eeeeeecCCCC-cceEe-eeeeeeCCCCceeeCCHHHHHHHHHHHhcccc
Q 031947 77 HCFPVYWNGDN-RRVLR-GHWFARKGGLDWLPIREDVAEQLEIAYRSQVW 124 (150)
Q Consensus 77 ~~~PVYW~g~~-~eVrR-GtWF~~~~~~~~~Pl~e~lA~~LE~~Y~~~~W 124 (150)
.-.|-+--.-. ++|.| |+|||.+ .|+.. .|-..|.+-.+
T Consensus 15 ~~~p~~cgd~dli~I~~dG~W~y~G-----~pI~r----~lVrLFssiL~ 55 (150)
T 2ra9_A 15 TTTTPLCSEVPLFDINALGDWTYLG-----TSLPA----KFAKLFASILH 55 (150)
T ss_dssp -------CCCCSEEECTTSCEEETT-----EECCH----HHHHHHHTTEE
T ss_pred CCCCCCccCcCceEECCCCcEEECC-----ccccH----HHHHHHHHheE
Confidence 34455655544 68877 9999964 58884 46666655433
No 9
>2vof_B BCL-2-binding component 3; BH3, apoptosis, Pro-surviVal, mitochondrion, protein- complex; 1.8A {Mus musculus} PDB: 2roc_B
Probab=24.10 E-value=34 Score=19.34 Aligned_cols=9 Identities=22% Similarity=0.564 Sum_probs=7.6
Q ss_pred HHHHHHHHh
Q 031947 15 NWWKEYAEC 23 (150)
Q Consensus 15 ~~w~~~ae~ 23 (150)
.||++|+-|
T Consensus 3 ~w~R~~~a~ 11 (26)
T 2vof_B 3 EWAREIGAQ 11 (26)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 699999876
No 10
>2yj1_B Alpha-beta-PUMA BH3 foldamer; apoptosis, membrane protein, BH3 domain, autophagy; HET: HT7 B3E B3Q HR7; 2.24A {Synthetic construct}
Probab=19.16 E-value=30 Score=19.57 Aligned_cols=9 Identities=0% Similarity=-0.119 Sum_probs=6.3
Q ss_pred HHHHHHHHh
Q 031947 15 NWWKEYAEC 23 (150)
Q Consensus 15 ~~w~~~ae~ 23 (150)
+||++|+-|
T Consensus 1 ~~~R~~~a~ 9 (26)
T 2yj1_B 1 XXARXIGAX 9 (26)
T ss_dssp -CHHHHHHH
T ss_pred ChHHHHHHH
Confidence 478888776
Done!