Query 031951
Match_columns 150
No_of_seqs 152 out of 1134
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 12:02:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 3.9E-54 1.3E-58 307.9 18.6 148 1-150 4-151 (151)
2 1z2u_A Ubiquitin-conjugating e 100.0 5.2E-53 1.8E-57 301.7 17.8 147 1-149 4-150 (150)
3 2r0j_A Ubiquitin carrier prote 100.0 4.2E-53 1.4E-57 301.9 17.2 147 2-150 2-148 (149)
4 1fxt_A Ubiquitin-conjugating e 100.0 2E-53 7E-58 303.5 15.0 147 1-149 1-149 (149)
5 2c2v_B Ubiquitin-conjugating e 100.0 3.1E-53 1.1E-57 304.0 16.0 147 2-150 6-152 (154)
6 2ayv_A Ubiquitin-conjugating e 100.0 1.4E-52 4.7E-57 303.8 19.1 146 1-148 21-166 (166)
7 2c4o_A Ubiquitin-conjugating e 100.0 1.2E-52 4.3E-57 303.8 18.6 147 1-149 19-165 (165)
8 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.9E-52 9.9E-57 302.9 18.2 146 2-149 5-150 (169)
9 2aak_A UBC1, ubiquitin conjuga 100.0 4.6E-52 1.6E-56 297.4 18.7 146 2-149 5-150 (152)
10 1jat_A Ubiquitin-conjugating e 100.0 1.1E-52 3.7E-57 301.6 15.2 148 1-150 5-152 (155)
11 1zdn_A Ubiquitin-conjugating e 100.0 2E-52 7E-57 301.0 16.7 145 2-148 14-158 (158)
12 1yh2_A HSPC150 protein similar 100.0 9.7E-52 3.3E-56 300.3 19.1 147 2-150 5-155 (169)
13 2bep_A Ubiquitin-conjugating e 100.0 1.4E-51 4.8E-56 296.9 18.4 147 2-150 9-159 (159)
14 3h8k_A Ubiquitin-conjugating e 100.0 2.4E-51 8.3E-56 297.0 19.1 146 2-149 4-163 (164)
15 3rcz_B SUMO-conjugating enzyme 100.0 1.8E-51 6.1E-56 297.2 17.9 145 2-148 11-162 (163)
16 2e2c_A Ubiquitin conjugating e 100.0 2.2E-51 7.4E-56 295.1 17.5 145 2-149 10-154 (156)
17 2gjd_A Ubiquitin-conjugating e 100.0 2.7E-51 9.1E-56 294.9 17.3 146 2-149 5-157 (157)
18 3bzh_A Ubiquitin-conjugating e 100.0 4.8E-51 1.7E-55 302.0 19.0 146 2-149 49-194 (194)
19 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3.9E-51 1.3E-55 302.2 18.2 147 1-149 32-192 (193)
20 2ucz_A UBC7, ubiquitin conjuga 100.0 4.8E-51 1.6E-55 295.7 17.8 146 2-149 5-164 (165)
21 3k9o_A Ubiquitin-conjugating e 100.0 9.1E-51 3.1E-55 302.6 18.7 148 1-150 5-156 (201)
22 2pwq_A Ubiquitin conjugating e 100.0 3.4E-51 1.2E-55 307.1 16.3 147 2-150 24-171 (216)
23 2grr_A Ubiquitin-conjugating e 100.0 8.8E-51 3E-55 293.2 17.2 147 2-150 8-161 (161)
24 1wzv_A Ubiquitin-conjugating e 100.0 7.2E-51 2.5E-55 292.1 16.6 146 1-149 4-151 (155)
25 1i7k_A Ubiquitin-conjugating e 100.0 8E-51 2.7E-55 297.5 16.0 146 2-150 31-176 (179)
26 1tte_A Ubiquitin-conjugating e 100.0 1.3E-50 4.3E-55 303.8 13.5 148 1-150 2-151 (215)
27 3fn1_B NEDD8-conjugating enzym 100.0 1.5E-49 5.2E-54 288.3 17.8 145 2-149 15-167 (167)
28 3e46_A Ubiquitin-conjugating e 100.0 2.3E-49 7.8E-54 303.1 18.4 147 2-150 58-208 (253)
29 3rz3_A Ubiquitin-conjugating e 100.0 4.8E-49 1.6E-53 289.4 17.2 145 2-148 8-172 (183)
30 2onu_A Ubiquitin-conjugating e 100.0 5.6E-50 1.9E-54 286.5 11.3 144 2-150 3-148 (152)
31 1c4z_D UBCH7, ubiquitin conjug 100.0 8.2E-50 2.8E-54 286.3 11.2 147 1-150 2-150 (154)
32 1yrv_A Ubiquitin-conjugating l 100.0 3.5E-49 1.2E-53 286.6 14.3 142 2-146 24-168 (169)
33 2awf_A Ubiquitin-conjugating e 100.0 7.1E-49 2.4E-53 285.9 14.7 140 2-143 18-172 (172)
34 2z5d_A Ubiquitin-conjugating e 100.0 5.1E-49 1.8E-53 287.7 12.3 142 2-149 26-169 (179)
35 2y9m_A Ubiquitin-conjugating e 100.0 5.6E-48 1.9E-52 281.2 17.5 146 2-149 7-168 (172)
36 1y8x_A Ubiquitin-conjugating e 100.0 5.7E-48 1.9E-52 278.2 16.6 140 2-146 7-147 (160)
37 4ddg_A Ubiquitin-conjugating e 100.0 6.5E-48 2.2E-52 312.6 17.9 148 1-150 3-150 (399)
38 2nvu_C NEDD8-conjugating enzym 100.0 2E-47 6.8E-52 279.9 16.2 140 2-146 27-167 (180)
39 1yf9_A Ubiquitin carrier prote 100.0 1.2E-47 4E-52 279.1 13.2 142 2-149 13-156 (171)
40 3o2u_A NEDD8-conjugating enzym 100.0 1.7E-46 5.9E-51 277.0 14.8 142 2-148 30-178 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 4.9E-45 1.7E-49 264.6 12.2 138 2-141 9-163 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 2E-43 7E-48 277.3 14.6 148 2-149 77-243 (323)
43 2fo3_A Ubiquitin-conjugating e 100.0 1.3E-42 4.6E-47 240.9 13.2 115 2-116 7-122 (125)
44 2q0v_A Ubiquitin-conjugating e 100.0 2.8E-43 9.6E-48 252.5 9.7 128 2-132 22-156 (156)
45 2h2y_A Ubiquitin-conjugating e 100.0 8.3E-42 2.9E-46 240.0 14.5 114 2-115 21-135 (136)
46 2a4d_A Ubiquitin-conjugating e 100.0 1.5E-41 5E-46 244.2 12.6 123 2-126 26-156 (160)
47 1jat_B Ubiquitin-conjugating e 100.0 2.6E-42 8.8E-47 243.2 6.4 124 2-128 7-137 (138)
48 2a7l_A Hypothetical ubiquitin- 100.0 2.6E-40 8.8E-45 232.2 13.0 109 3-111 24-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 5E-41 1.7E-45 243.8 8.8 123 2-126 36-166 (170)
50 2f4w_A Ubiquitin-conjugating e 100.0 2.2E-39 7.5E-44 238.5 15.7 136 1-138 14-153 (187)
51 1zuo_A Hypothetical protein LO 100.0 1.1E-39 3.7E-44 239.9 4.6 137 2-148 28-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 3.3E-29 1.1E-33 178.3 2.3 96 3-104 34-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 6.6E-21 2.3E-25 136.5 9.6 112 4-116 31-160 (162)
54 3kpa_A Probable ubiquitin fold 99.8 1.3E-20 4.5E-25 131.4 1.1 95 3-103 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 1.9E-15 6.6E-20 106.4 6.7 80 28-113 51-139 (146)
56 2ebm_A RWD domain-containing p 97.0 0.0066 2.2E-07 40.8 9.2 66 4-71 13-78 (128)
57 2yz0_A Serine/threonine-protei 96.4 0.027 9.1E-07 38.3 9.0 66 5-71 14-85 (138)
58 2day_A Ring finger protein 25; 96.4 0.023 7.8E-07 38.1 8.3 68 5-72 12-83 (128)
59 3zqs_A E3 ubiquitin-protein li 96.2 0.09 3.1E-06 37.9 10.8 84 5-112 5-88 (186)
60 2ebk_A RWD domain-containing p 95.9 0.054 1.8E-06 36.3 8.1 65 5-70 11-78 (128)
61 2daw_A RWD domain containing p 95.7 0.08 2.7E-06 36.8 8.7 23 49-71 76-98 (154)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 94.7 0.16 5.5E-06 34.2 7.4 66 4-70 13-85 (137)
63 2dax_A Protein C21ORF6; RWD do 93.7 0.14 4.7E-06 35.4 5.5 25 48-72 73-97 (152)
64 2cwb_A Chimera of immunoglobul 81.4 0.3 1E-05 32.1 0.0 31 119-149 25-55 (108)
65 3u3c_B Paxillin LD2 peptide; 4 79.1 1.5 5.2E-05 20.4 2.0 19 3-21 7-25 (26)
66 2bum_A Protocatechuate 3,4-dio 36.9 32 0.0011 24.9 3.5 26 45-70 108-138 (209)
67 3g9r_A Fusion complex of HIV-1 30.4 34 0.0012 17.9 1.9 13 3-15 30-42 (42)
68 2f4m_B UV excision repair prot 29.4 52 0.0018 18.9 2.9 20 121-140 37-56 (61)
69 1h3o_B Transcription initiatio 27.9 64 0.0022 19.4 3.2 41 107-149 12-52 (76)
70 1pve_A HHR23B, UV excision rep 26.5 52 0.0018 19.6 2.6 22 120-141 38-59 (72)
71 1zoq_C CREB-binding protein, i 23.7 58 0.002 17.6 2.2 43 103-149 3-46 (47)
72 2fkn_A Urocanate hydratase; ro 23.1 92 0.0031 25.8 4.2 27 122-148 277-303 (552)
73 1x87_A Urocanase protein; stru 22.9 93 0.0032 25.7 4.2 27 122-148 276-302 (551)
74 1uwk_A Urocanate hydratase; hy 22.6 95 0.0033 25.7 4.2 27 122-148 281-307 (557)
75 1taf_B TFIID TBP associated fa 21.7 1.3E+02 0.0043 17.7 3.7 30 119-148 22-51 (70)
76 3rls_A YAF9, protein AF-9 homo 21.6 2.1E+02 0.0073 20.0 6.4 45 28-74 30-74 (175)
77 2c5k_P Vacuolar protein sortin 21.5 49 0.0017 15.7 1.4 12 4-15 13-24 (26)
78 3t63_M 3,4-PCD, protocatechuat 21.1 54 0.0019 24.2 2.3 25 46-70 133-164 (238)
79 2ccv_A Helix pomatia agglutini 21.0 1.5E+02 0.0052 18.5 4.2 24 46-70 27-50 (101)
80 2bum_B Protocatechuate 3,4-dio 20.6 56 0.0019 24.1 2.3 26 45-70 133-165 (241)
81 3s7v_A Major capsid protein VP 20.3 2.3E+02 0.0077 21.2 5.5 24 63-86 214-239 (277)
82 3t63_A 3,4-PCD, protocatechuat 20.3 65 0.0022 23.1 2.6 23 48-70 102-129 (200)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=3.9e-54 Score=307.88 Aligned_cols=148 Identities=63% Similarity=1.181 Sum_probs=145.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
+|.|||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 83 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK 83 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
+|.||++++.++|+|+++|.+||.+|+++|.+||++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPS--DPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTT--SCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCC--CchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999 99999999999999999999999999999986
No 2
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=5.2e-53 Score=301.74 Aligned_cols=147 Identities=73% Similarity=1.323 Sum_probs=144.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
+|.||++++.++|+|++++.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~--~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCC--CccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999 9999999999999999999999999999996
No 3
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4.2e-53 Score=301.89 Aligned_cols=147 Identities=46% Similarity=0.875 Sum_probs=143.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNN 81 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~ 81 (150)
+.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 82 GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
|.||++++.++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPD--DPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTT--SCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCC--CchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999999999 99999999999999999999999999999985
No 4
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2e-53 Score=303.55 Aligned_cols=147 Identities=42% Similarity=0.840 Sum_probs=143.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCC-CceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceee
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGPIAE-GLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNIN 79 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~ 79 (150)
||.+||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 1 ~~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 1 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CCHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred ChHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 6899999999999999999999999887 999999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 80 N-NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 80 ~-~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
. +|.||++++.++|+|++++.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPN--DPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSS--SCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 7 999999999999999999999999999999999999 9999999999999999999999999999996
No 5
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-53 Score=304.04 Aligned_cols=147 Identities=46% Similarity=0.845 Sum_probs=142.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNN 81 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~ 81 (150)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 6 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 85 (154)
T 2c2v_B 6 LPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 85 (154)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 82 GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
|.||+++|.++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 86 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~--~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD--DPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp CBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCC--CC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999 99999999999999999999999999999974
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-52 Score=303.82 Aligned_cols=146 Identities=71% Similarity=1.301 Sum_probs=143.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
++.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhc
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYA 148 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a 148 (150)
+|.||+++|.++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~--~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLSISSLLTDPNPD--DPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCC--chhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999 999999999999999999999999999998
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.2e-52 Score=303.85 Aligned_cols=147 Identities=73% Similarity=1.321 Sum_probs=144.0
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
+|.||+++|.++|+|+++|.+||.+|+++|.+||++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~--~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCC--ccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999 9999999999999999999999999999996
No 8
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-52 Score=302.90 Aligned_cols=146 Identities=38% Similarity=0.813 Sum_probs=143.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNN 81 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~ 81 (150)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.+
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~ 84 (169)
T 1ayz_A 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYAN 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 82 GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
|.||+++|.++|+|+++|.+||.+|++||.+|+++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~--~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 85 GEICLDILQNRWTPTYDVASILTSIQSLFNDPNPA--SPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp SBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCS--SCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCC--cHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999 9999999999999999999999999999985
No 9
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=4.6e-52 Score=297.42 Aligned_cols=146 Identities=42% Similarity=0.852 Sum_probs=143.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNN 81 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~ 81 (150)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (152)
T 2aak_A 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 82 GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
|.||++++.++|+|++++.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 150 (152)
T 2aak_A 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN--SPANSEAARMYSESKREYNRRVRDVVEQSWT 150 (152)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTT--SCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCC--ccccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999 9999999999999999999999999999996
No 10
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.1e-52 Score=301.57 Aligned_cols=148 Identities=47% Similarity=0.816 Sum_probs=144.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
+|.||++++.++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPN--DPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT--STTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999 99999999999999999999999999999963
No 11
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-52 Score=300.95 Aligned_cols=145 Identities=39% Similarity=0.673 Sum_probs=142.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNN 81 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~ 81 (150)
+.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhc
Q 031951 82 GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYA 148 (150)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a 148 (150)
|.||+++|.++|+|++++.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||
T Consensus 94 G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~--~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPE--SALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGG--GCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999 999999999999999999999999999998
No 12
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.7e-52 Score=300.33 Aligned_cols=147 Identities=38% Similarity=0.773 Sum_probs=143.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNN 81 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~ 81 (150)
+.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~ 84 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSA 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCC----CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 82 GSICLDILK----DQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 82 G~vcl~~l~----~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
|.||++++. ++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~--~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 85 GRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPD--DPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp CBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCc--chHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 999999998 89999999999999999999999999 99999999999999999999999999999974
No 13
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.4e-51 Score=296.88 Aligned_cols=147 Identities=39% Similarity=0.767 Sum_probs=142.5
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEeccccccee
Q 031951 2 ASKRIIKELRDLQSD---PPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNI 78 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv 78 (150)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 9 a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 88 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 88 (159)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCC
Confidence 679999999999985 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 79 N-NNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 79 ~-~~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
+ .+|.||++++.++|+|++++.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||+|
T Consensus 89 ~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 89 SSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPD--DPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp CTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 9 5999999999999999999999999999999999999 99999999999999999999999999999986
No 14
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.4e-51 Score=297.01 Aligned_cols=146 Identities=36% Similarity=0.792 Sum_probs=142.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCC-CceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAE-GLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
|+|||++|+++|+++++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~ 83 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYP 83 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCC
Confidence 789999999999999999999999876 9999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCC-------------CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHh
Q 031951 81 NGSICLDILK-------------DQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKY 147 (150)
Q Consensus 81 ~G~vcl~~l~-------------~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~ 147 (150)
+|+||+++|. ++|+|+++|.+||.+|+++|.+||++ +|+|.+||++|++|+++|.++||+|++++
T Consensus 84 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~--~p~n~~aa~~~~~~~~~f~~~~~~~~~~s 161 (164)
T 3h8k_A 84 DGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDE--SGANVDASKMWRDDREQFYKIAKQIVQKS 161 (164)
T ss_dssp TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCS--SCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCC--CccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 9999999996 78999999999999999999999999 99999999999999999999999999999
Q ss_pred cC
Q 031951 148 AM 149 (150)
Q Consensus 148 a~ 149 (150)
+.
T Consensus 162 ~~ 163 (164)
T 3h8k_A 162 LG 163 (164)
T ss_dssp HT
T ss_pred hc
Confidence 85
No 15
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-51 Score=297.17 Aligned_cols=145 Identities=34% Similarity=0.730 Sum_probs=141.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCC-----CceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccc
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAE-----GLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHP 76 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HP 76 (150)
|.+||++|+++|+++++.|+++.|.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999999999999999999876 899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeccCCCC--CCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhc
Q 031951 77 NINNNGSICLDILKD--QWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYA 148 (150)
Q Consensus 77 nv~~~G~vcl~~l~~--~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a 148 (150)
||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||
T Consensus 91 nV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~--~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 91 NVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIA--SPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCC--CccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999975 4999999999999999999999999 999999999999999999999999999998
No 16
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-51 Score=295.06 Aligned_cols=145 Identities=37% Similarity=0.725 Sum_probs=141.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNN 81 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~ 81 (150)
+.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 10 ~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 89 (156)
T 2e2c_A 10 VSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQS 89 (156)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 82 GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
|.||++++.++|+|++++.+||.+|+++|.+|+++ +|+|.+||++| +|+++|.++||+|+++||.
T Consensus 90 G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~--~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 90 GNICLDILKENWTASYDVRTILLSLQSLLGEPNNA--SPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCS--SCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred ceEECccccccCCCCCcHHHHHHHHHHHHhCCCCC--CHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999 99999999999 8999999999999999984
No 17
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2.7e-51 Score=294.85 Aligned_cols=146 Identities=31% Similarity=0.691 Sum_probs=141.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-----CCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccc
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIA-----EGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHP 76 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HP 76 (150)
|.+||++|+++|+++++.|+++.|.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 5 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHP 84 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccC
Confidence 68999999999999999999999875 4899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeccCCCC--CCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 77 NINNNGSICLDILKD--QWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 77 nv~~~G~vcl~~l~~--~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 85 NVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPN--SPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTT--CCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCC--CccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999986 7999999999999999999999999 9999999999999999999999999999996
No 18
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=4.8e-51 Score=302.04 Aligned_cols=146 Identities=58% Similarity=1.104 Sum_probs=143.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNN 81 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~ 81 (150)
+.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||||+.+
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 128 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ 128 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 82 GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
|.||+++|.++|+|+++|.+||.+|++||.+||++ +|+|.+||++|++|+++|.++|++|+++||+
T Consensus 129 G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~--~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 129 GVICLDILKDNWSPALTISKVLLSICSLLTDCNPA--DPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CceechhhhccCCCcCcHHHHHHHHHHHHhCCCCc--cchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999 9999999999999999999999999999996
No 19
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-51 Score=302.20 Aligned_cols=147 Identities=44% Similarity=0.841 Sum_probs=140.4
Q ss_pred ChHHHHHHHHHHhhcCCC-------------CCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCee
Q 031951 1 MASKRIIKELRDLQSDPP-------------SSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKV 67 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~-------------~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i 67 (150)
+|.+||++|+++|+++++ .|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 367999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred EEecccccceee-CCCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHH
Q 031951 68 AFKTKVFHPNIN-NNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQK 146 (150)
Q Consensus 68 ~f~t~i~HPnv~-~~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~ 146 (150)
+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~--~P~n~~aa~l~~~d~~~f~~~ar~~t~~ 189 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPT--DPQDAEVAKMMIENHPLFVQTAKLWTET 189 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 999999999999 5999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred hcC
Q 031951 147 YAM 149 (150)
Q Consensus 147 ~a~ 149 (150)
||+
T Consensus 190 ya~ 192 (193)
T 2f4z_A 190 FAK 192 (193)
T ss_dssp HCC
T ss_pred Hcc
Confidence 997
No 20
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-51 Score=295.72 Aligned_cols=146 Identities=37% Similarity=0.786 Sum_probs=141.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-CCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIA-EGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
|.+||++|+++|+++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 84 (165)
T 2ucz_A 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP 84 (165)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC
Confidence 68999999999999999999999976 69999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCC-------------CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHh
Q 031951 81 NGSICLDIL-------------KDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKY 147 (150)
Q Consensus 81 ~G~vcl~~l-------------~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~ 147 (150)
+|+||+++| .++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|++++
T Consensus 85 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~--~p~n~~aa~~~~~~~~~y~~~v~~~~~~~ 162 (165)
T 2ucz_A 85 NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIE--SGANIDACILWRDNRPEFERQVKLSILKS 162 (165)
T ss_dssp TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGG--GCCCHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCC--CchhHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence 999999999 689999999999999999999999999 99999999999999999999999999998
Q ss_pred cC
Q 031951 148 AM 149 (150)
Q Consensus 148 a~ 149 (150)
+.
T Consensus 163 ~~ 164 (165)
T 2ucz_A 163 LG 164 (165)
T ss_dssp TT
T ss_pred hh
Confidence 74
No 21
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=9.1e-51 Score=302.56 Aligned_cols=148 Identities=39% Similarity=0.768 Sum_probs=143.1
Q ss_pred ChHHHHHHHHHHhhcC---CCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccce
Q 031951 1 MASKRIIKELRDLQSD---PPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPN 77 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 77 (150)
+|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 84 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 84 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCC
Confidence 4789999999999987 3789999999999999999999999999999999999999999999999999999999999
Q ss_pred ee-CCCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 78 IN-NNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 78 v~-~~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
|+ .+|.||+++|.++|+|+++|.+||.+|+++|.+||++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 v~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~--~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 85 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPD--DPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99 5999999999999999999999999999999999999 99999999999999999999999999999974
No 22
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=3.4e-51 Score=307.05 Aligned_cols=147 Identities=44% Similarity=0.871 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceee-C
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNIN-N 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~-~ 80 (150)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+ .
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
+|.||+++|.++|+|+++|.+||.+|++||.+|+++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~--dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPD--DPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999 99999999999999999999999999999974
No 23
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=8.8e-51 Score=293.23 Aligned_cols=147 Identities=34% Similarity=0.711 Sum_probs=141.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-----CCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccc
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIA-----EGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHP 76 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HP 76 (150)
|.+||++|+++|+++++.|+.+.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 87 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHP 87 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccC
Confidence 67999999999999999999998864 6899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeccCCCC--CCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 77 NINNNGSICLDILKD--QWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 77 nv~~~G~vcl~~l~~--~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
||+.+|.||++++.. +|+|++++.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 88 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 88 NVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQ--SPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred CCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCC--CccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 999999999999975 8999999999999999999999998 99999999999999999999999999999985
No 24
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=7.2e-51 Score=292.09 Aligned_cols=146 Identities=36% Similarity=0.770 Sum_probs=141.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeE-eecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceee
Q 031951 1 MASKRIIKELRDLQSDPPSSCSA-GPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNIN 79 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~-~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~ 79 (150)
+|.+||++|+++|+++++.|+.+ .+.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 37899999999999999999999 788899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCceeccCC-CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 80 NNGSICLDIL-KDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 80 ~~G~vcl~~l-~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
.+|.||++++ .++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 151 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIR--EPLRMDLADLLTQNPELFRKNAEEFTLRFGV 151 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSS--SCSSHHHHHHHHHCHHHHHHHHHHHHHHHCE
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999 899999999999999999999999999 9999999999999999999999999999996
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8e-51 Score=297.48 Aligned_cols=146 Identities=34% Similarity=0.623 Sum_probs=142.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNN 81 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~ 81 (150)
+.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||||+.+
T Consensus 31 ~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 110 (179)
T 1i7k_A 31 VGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQ 110 (179)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 82 GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
|.||+++|.++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++| +|+++|.++|++++++++++
T Consensus 111 G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~--~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 111 GNISLDILKEKWSALYDVRTILLSIQSLLGEPNID--SPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred CeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCc--chhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999 99999999999 99999999999999999864
No 26
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.3e-50 Score=303.80 Aligned_cols=148 Identities=41% Similarity=0.833 Sum_probs=142.8
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCC-ceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceee
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGPIAEG-LFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNIN 79 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~~~~~-~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~ 79 (150)
+|.+||++|+++|++++++|+++.+.++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999998764 66999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 80 N-NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 80 ~-~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
. +|.||+++|.++|+|+++|.+||.+|++||.+|+++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~--~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPN--DPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCS--SCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCC--CccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 8 999999999999999999999999999999999999 99999999999999999999999999999974
No 27
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.5e-49 Score=288.35 Aligned_cols=145 Identities=36% Similarity=0.651 Sum_probs=138.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeec-CCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPI-AEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~-~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
+.|||++|+++|+++++.|+++.+. ++|++.|.++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 93 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE 93 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC
Confidence 6799999999999999999999864 57899999998 899999999999999999999999999999999999999999
Q ss_pred CCceeccCCCC------CCCCCCCHHHHHHHHHHhhcC-CCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 81 NGSICLDILKD------QWSPALTISKVLLSICSLLTD-PNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 81 ~G~vcl~~l~~------~W~p~~~~~~il~~i~~ll~~-~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
+|.||+++|.. +|+|+++|.+||.+|+++|.+ ||++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 94 ~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~--~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 94 TGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFD--DPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp TCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSS--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCC--cchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999975 799999999999999999999 6998 9999999999999999999999999999996
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.3e-49 Score=303.07 Aligned_cols=147 Identities=39% Similarity=0.767 Sum_probs=142.6
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEeccccccee
Q 031951 2 ASKRIIKELRDLQSD---PPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNI 78 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv 78 (150)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 58 a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 137 (253)
T 3e46_A 58 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 137 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCc
Confidence 689999999999987 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 79 N-NNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 79 ~-~~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+||++ +|+|.+||++|++|+++|.++|++|+++||++
T Consensus 138 ~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~--~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 138 SSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPD--DPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp CTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTT--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCC--ChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9 5999999999999999999999999999999999999 99999999999999999999999999999974
No 29
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=4.8e-49 Score=289.38 Aligned_cols=145 Identities=31% Similarity=0.707 Sum_probs=139.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe-ecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAG-PIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
|.|||++|+++|+++++.|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 8 a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 87 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE 87 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC
Confidence 67999999999999999999998 66789999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCC-------------CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHH------CHHHHHHHHH
Q 031951 81 NGSICLDILK-------------DQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKT------DKLKYENLAR 141 (150)
Q Consensus 81 ~G~vcl~~l~-------------~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~------~~~~f~~~~~ 141 (150)
+|.||+++|. ++|+|+++|.+||.+|+++|.+||++ +|+|.+||++|++ |+++|+++|+
T Consensus 88 ~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~--~p~n~~aa~~~~~~~~~~~~~~~y~~~v~ 165 (183)
T 3rz3_A 88 TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTF--SPANVDASVMYRKWKESKGKDREYTDIIR 165 (183)
T ss_dssp TSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCS--SCSSHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHhcccccccHHHHHHHHH
Confidence 9999999996 88999999999999999999999999 9999999999998 7899999999
Q ss_pred HHHHHhc
Q 031951 142 NWTQKYA 148 (150)
Q Consensus 142 ~~~~~~a 148 (150)
++|++++
T Consensus 166 ~~v~~s~ 172 (183)
T 3rz3_A 166 KQVLGTK 172 (183)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999886
No 30
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=5.6e-50 Score=286.50 Aligned_cols=144 Identities=31% Similarity=0.627 Sum_probs=137.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceee-C
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNIN-N 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~-~ 80 (150)
|.|||++|++++++. |+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~ 79 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEA 79 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCc
Confidence 578999999999874 788889999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHH-HHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLS-ICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~-i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
+|.||++++.++|+|++++.+||.+ |++||.+|+++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 80 ~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~--~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 80 SGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPS--DPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCS--SCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred CCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999 68999999999 99999999999999999999999999999974
No 31
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=8.2e-50 Score=286.30 Aligned_cols=147 Identities=37% Similarity=0.798 Sum_probs=136.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEee-cCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceee
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGP-IAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNIN 79 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~ 79 (150)
+|.+||++|+++|+++++.|+.+.+ .++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 3679999999999999999998654 5689999999998 9999999999999999999999999999999999999999
Q ss_pred CCCceeccCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 80 NNGSICLDILK-DQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 80 ~~G~vcl~~l~-~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
.+|.||+++|. ++|+|++++.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~--~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPE--HPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCS--SCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC--chhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 99999999996 89999999999999999999999998 99999999999999999999999999999973
No 32
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-49 Score=286.61 Aligned_cols=142 Identities=27% Similarity=0.609 Sum_probs=137.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEeccccccee-eC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNI-NN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv-~~ 80 (150)
|++||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||| +.
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~ 103 (169)
T 1yrv_A 24 AYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPH 103 (169)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999 68
Q ss_pred CCceeccCCC--CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHH
Q 031951 81 NGSICLDILK--DQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQK 146 (150)
Q Consensus 81 ~G~vcl~~l~--~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~ 146 (150)
+|.||+++|. ++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++ +++|++
T Consensus 104 ~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~--~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 104 TGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLE--NPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp TCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTT--SCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCC--CchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9999999998 89999999999999999999999999 999999999999999999999 888864
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=7.1e-49 Score=285.85 Aligned_cols=140 Identities=36% Similarity=0.815 Sum_probs=108.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-CCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIA-EGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
|.|||++|+++|+++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 18 ~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~ 97 (172)
T 2awf_A 18 GSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDK 97 (172)
T ss_dssp THHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCC
Confidence 68999999999999999999999876 69999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCC-------------CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHH-HHHHHHHHH
Q 031951 81 NGSICLDILK-------------DQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKL-KYENLARNW 143 (150)
Q Consensus 81 ~G~vcl~~l~-------------~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~-~f~~~~~~~ 143 (150)
+|.||+++|. ++|+|+++|.+||.+|++||.+|+++ +|+|.+||++|++|++ +|+++||+|
T Consensus 98 ~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~--~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 98 NGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGD--SPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp TCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-------------------------------
T ss_pred CCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCC--CccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9999999996 68999999999999999999999999 9999999999999999 999999986
No 34
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.1e-49 Score=287.68 Aligned_cols=142 Identities=32% Similarity=0.703 Sum_probs=136.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC-
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN- 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~- 80 (150)
|.|||++|+++|++ +|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 26 a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~ 101 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEA 101 (179)
T ss_dssp HHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCC
Confidence 57999999999985 47888887 67899999999999999999999999999999999999999999999999998
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHH-HHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLS-ICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~-i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
+|.||++++.++|+|+++|.+||.+ |++||.+||++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 102 ~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~--~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 102 SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI--DPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp TCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCS--SCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCC--CccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999 99999999999 9999999999999999999999999999996
No 35
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=5.6e-48 Score=281.16 Aligned_cols=146 Identities=30% Similarity=0.656 Sum_probs=137.1
Q ss_pred hHHHHHHHHHHhhc-C-C------CC---CeeEee-cCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEE
Q 031951 2 ASKRIIKELRDLQS-D-P------PS---SCSAGP-IAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAF 69 (150)
Q Consensus 2 a~~Rl~~E~~~l~~-~-~------~~---~~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f 69 (150)
|.+||++|+++|++ + + +. ++.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 57999999999998 5 3 33 466778 77899999999999999999999999999999999999999999
Q ss_pred ec-ccccceee-CCCceeccCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHH-CHHHHHHHHHHHHH
Q 031951 70 KT-KVFHPNIN-NNGSICLDILK-DQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKT-DKLKYENLARNWTQ 145 (150)
Q Consensus 70 ~t-~i~HPnv~-~~G~vcl~~l~-~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~-~~~~f~~~~~~~~~ 145 (150)
.| +||||||+ .+|.||+++|. ++|+|++++.+||.+|+++|.+|+++ +|+|.+||++|++ |+++|.++||+|++
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~--~p~n~~aa~~~~~~d~~~f~~~~~~~~~ 164 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCD--SPLDVDIGNIIRCGDMSAYQGIVKYFLA 164 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSSHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCC--CccCHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99 99999997 79999999998 89999999999999999999999999 9999999999999 99999999999999
Q ss_pred HhcC
Q 031951 146 KYAM 149 (150)
Q Consensus 146 ~~a~ 149 (150)
+++.
T Consensus 165 ~~~~ 168 (172)
T 2y9m_A 165 ERER 168 (172)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9873
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.7e-48 Score=278.20 Aligned_cols=140 Identities=31% Similarity=0.681 Sum_probs=134.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe-ecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAG-PIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
|.+||++|+++| ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 7 ~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (160)
T 1y8x_A 7 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 83 (160)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC
Confidence 689999999999 467899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHH
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQK 146 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~ 146 (150)
+|.||++++.++|+|++++.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++||+|++.
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~--~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 84 EGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPE--DPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCS--SCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCC--CccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999 9999999999999999999999999874
No 37
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=6.5e-48 Score=312.57 Aligned_cols=148 Identities=72% Similarity=1.302 Sum_probs=145.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
||+|||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAMG 150 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (150)
+|.||++++.++|+|++++.+||.+|+++|.+||++ +|+|.+||++|++|+++|.++||+|+++||++
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~--~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTT--SCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCC--chhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999 99999999999999999999999999999974
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-47 Score=279.89 Aligned_cols=140 Identities=31% Similarity=0.655 Sum_probs=134.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe-ecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAG-PIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
|.+||++|+++| ++++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 27 ~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~ 103 (180)
T 2nvu_C 27 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 103 (180)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC
Confidence 679999999999 467899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHH
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQK 146 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~ 146 (150)
+|.||+++|.++|+|+++|.+||.+|+++|.+|+++ +|+|.+||++|++|+++|.++|++|++.
T Consensus 104 ~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~--~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 104 EGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPE--DPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp TSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTT--SCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCC--CccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999 9999999999999999999999999885
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-47 Score=279.09 Aligned_cols=142 Identities=28% Similarity=0.638 Sum_probs=134.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceee-C
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNIN-N 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~-~ 80 (150)
+.+||++|+++|++++. ++ +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 13 ~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~ 88 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDER 88 (171)
T ss_dssp CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCccc
Confidence 46999999999999874 33 3578999999999999999999999999999999999999999999999999999 5
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHH-HHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSI-CSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i-~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
+|.||+++|.++|+|+++|.+||.+| ++||.+|+++ +|+|.+||++|++|+++|.++||+|+++||+
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~--~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 89 SGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPS--DPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSS--CCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCC--CcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999997 7999999999 9999999999999999999999999999996
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.7e-46 Score=277.03 Aligned_cols=142 Identities=30% Similarity=0.598 Sum_probs=135.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe----ecCCCce---eEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccc
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAG----PIAEGLF---RWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVF 74 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~----~~~~~~~---~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~ 74 (150)
|.+||++|+++|+ +++|+++. +.++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 30 a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 30 ARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp HHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 6899999999998 67899998 8889999 9999997 88899999999999999999999999999999999
Q ss_pred cceeeCCCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhc
Q 031951 75 HPNINNNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYA 148 (150)
Q Consensus 75 HPnv~~~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a 148 (150)
||||+.+|.||++++.++|+|++++.+||.+|+++|.+||++ +|+|.+||++|++|+++|.++||+|++...
T Consensus 107 HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~--~pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 107 HPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPN--DPLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp CTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTT--SCSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred cCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCC--cchhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999 999999999999999999999999997543
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=4.9e-45 Score=264.60 Aligned_cols=138 Identities=29% Similarity=0.574 Sum_probs=129.1
Q ss_pred hHHHHHHHHHHhhcCC------------CCCeeEeecCCCceeEEEEEECCCCCCCC--CcEEEEEEeCCCCCCCCCCee
Q 031951 2 ASKRIIKELRDLQSDP------------PSSCSAGPIAEGLFRWQATVIGPTDSPYA--GGIFHVAINFPPDYPFKPPKV 67 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~------------~~~~~~~~~~~~~~~w~~~i~gp~~t~y~--gg~f~~~i~fp~~YP~~pP~i 67 (150)
|.|||++|+++|++++ +.++.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||++||+|
T Consensus 9 a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v 88 (167)
T 4ds2_A 9 SNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTV 88 (167)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEE
Confidence 6799999999999876 77899999999999999999999999999 999999999999999999999
Q ss_pred EEecccccceeeCCCceeccCCCCCCCCCCCHHHHHH-HHHHhhcC--CCCCCCCCchHHHHHHHHHCHHHHHHHHH
Q 031951 68 AFKTKVFHPNINNNGSICLDILKDQWSPALTISKVLL-SICSLLTD--PNPDDDDPLVPEIAHLCKTDKLKYENLAR 141 (150)
Q Consensus 68 ~f~t~i~HPnv~~~G~vcl~~l~~~W~p~~~~~~il~-~i~~ll~~--~~~~~~~~~n~~aa~~~~~~~~~f~~~~~ 141 (150)
+|.|++|||||+.+|.||++++.++|+|++++.++|. .|++++.. |+++ +|+|.+||++|++|+++|.++||
T Consensus 89 ~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~--~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 89 RFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRD--DDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp EESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCS--CCCCHHHHHHHHHCHHHHHHHHT
T ss_pred EEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCc--chHhHHHHHHHHHCHHHHHHHHh
Confidence 9999999999999999999999999999999999754 56677765 5666 99999999999999999999998
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=277.27 Aligned_cols=148 Identities=32% Similarity=0.566 Sum_probs=136.5
Q ss_pred hHHHHHHHHHHhhcCCCCC----eeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecc-----
Q 031951 2 ASKRIIKELRDLQSDPPSS----CSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTK----- 72 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~----~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~----- 72 (150)
+.+||++|+++|+++++.| +.+.+.++|++.|+++|.||++|||+||.|+|.|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 5799999999999987664 4567788999999999999999999999999999999999999999999998
Q ss_pred cccceeeCCCceeccCCC-------CCCCCCC-CHHHHHHHHHHhhcCCCCCCCCCchHHH--HHHHHHCHHHHHHHHHH
Q 031951 73 VFHPNINNNGSICLDILK-------DQWSPAL-TISKVLLSICSLLTDPNPDDDDPLVPEI--AHLCKTDKLKYENLARN 142 (150)
Q Consensus 73 i~HPnv~~~G~vcl~~l~-------~~W~p~~-~~~~il~~i~~ll~~~~~~~~~~~n~~a--a~~~~~~~~~f~~~~~~ 142 (150)
+|||||+.+|.||+++|. ++|+|++ +|.+||.+|++||.+++|+.++|+|.++ +.++.+|+++|.++|+.
T Consensus 157 ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~ 236 (323)
T 3ceg_A 157 RFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQ 236 (323)
T ss_dssp CCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHH
Confidence 999999999999999997 6999999 8999999999999866664459999987 57899999999999999
Q ss_pred HHHHhcC
Q 031951 143 WTQKYAM 149 (150)
Q Consensus 143 ~~~~~a~ 149 (150)
|+++|||
T Consensus 237 ~t~k~A~ 243 (323)
T 3ceg_A 237 ATVKWAM 243 (323)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9999997
No 43
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-42 Score=240.92 Aligned_cols=115 Identities=37% Similarity=0.710 Sum_probs=106.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEeccc-ccceeeC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKV-FHPNINN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i-~HPnv~~ 80 (150)
|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 7 a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 86 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS 86 (125)
T ss_dssp --CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCCC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPD 116 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~ 116 (150)
+|+||++++.++|+|++++.+||.+|+++|.+|+..
T Consensus 87 ~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 87 NGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999998764
No 44
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2.8e-43 Score=252.49 Aligned_cols=128 Identities=26% Similarity=0.449 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHhhcC-CCCCeeEeecC-C--CceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccce
Q 031951 2 ASKRIIKELRDLQSD-PPSSCSAGPIA-E--GLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPN 77 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 77 (150)
+.+||++|+++|+++ ++.|+++.+.. + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 22 ~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 101 (156)
T 2q0v_A 22 RSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSC 101 (156)
T ss_dssp HHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCC
Confidence 679999999999998 78899998854 3 5999999999999999999999999999999999999999999999999
Q ss_pred eeCCCce---eccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHC
Q 031951 78 INNNGSI---CLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTD 132 (150)
Q Consensus 78 v~~~G~v---cl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~ 132 (150)
|+.+|+| |++++. +|+|+++|.+||.+|+++|.+|+++ +++|.+||++|++|
T Consensus 102 V~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~--~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 102 VDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANK--RLPQPNEGEVYSNN 156 (156)
T ss_dssp BCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTT--TCCCCCTTCBC---
T ss_pred CccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCC--CcCChHHHHHhhhC
Confidence 9999999 888886 5999999999999999999999999 99999999988765
No 45
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.3e-42 Score=240.01 Aligned_cols=114 Identities=36% Similarity=0.710 Sum_probs=110.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEeccc-ccceeeC
Q 031951 2 ASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKV-FHPNINN 80 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i-~HPnv~~ 80 (150)
|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 21 ~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 100 (136)
T 2h2y_A 21 ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYS 100 (136)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCceeccCCCCCCCCCCCHHHHHHHHHHhhcCCCC
Q 031951 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNP 115 (150)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~~~~~ 115 (150)
+|+||++++.++|+|++++.+||.+|++||.+|+.
T Consensus 101 ~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 101 NGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 99999999999999999999999999999998863
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.5e-41 Score=244.23 Aligned_cols=123 Identities=30% Similarity=0.489 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeEeec-CCC--ceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccce
Q 031951 2 ASKRIIKELRDLQSDPPSS-CSAGPI-AEG--LFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPN 77 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~-~~~~~~-~~~--~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 77 (150)
+.+||++|+++|++++++| +.+.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 5689999999999998888 677763 454 899999999999999999999999999999999999999999999999
Q ss_pred ee-CCCceeccCCC--CCCCCCCCHHHHHHHHHHhhc-CCCCCCCCCchHHHH
Q 031951 78 IN-NNGSICLDILK--DQWSPALTISKVLLSICSLLT-DPNPDDDDPLVPEIA 126 (150)
Q Consensus 78 v~-~~G~vcl~~l~--~~W~p~~~~~~il~~i~~ll~-~~~~~~~~~~n~~aa 126 (150)
|+ .+|+||++++. ++|+|+++|.+||.+|+++|. .||++ +|+|.|||
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~--~P~n~eaa 156 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMK--LPQPPEGQ 156 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTT--CCCCCTTC
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCC--CCCChhhc
Confidence 99 69999999997 899999999999999999995 68888 99999987
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=2.6e-42 Score=243.23 Aligned_cols=124 Identities=28% Similarity=0.576 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHhhcC-CCCCeeEeecC-C--CceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccce
Q 031951 2 ASKRIIKELRDLQSD-PPSSCSAGPIA-E--GLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPN 77 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 77 (150)
+.+||++|+++++++ ++.|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 86 (138)
T 1jat_B 7 RNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPC 86 (138)
T ss_dssp HHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCC
Confidence 568999999999998 78899998854 3 4899999999999999999999999999999999999999999999999
Q ss_pred eeCC-Cce--eccCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHH
Q 031951 78 INNN-GSI--CLDILKDQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHL 128 (150)
Q Consensus 78 v~~~-G~v--cl~~l~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~ 128 (150)
|+.+ |.| |++++. +|+|++++.+||.+|+++|.+||++ +++|.+||.+
T Consensus 87 v~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~--~p~~~~~~~~ 137 (138)
T 1jat_B 87 VNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANK--KLRQPKEGET 137 (138)
T ss_dssp BCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHH--TSCCCCTTCB
T ss_pred EeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCC--CCCCcchhhc
Confidence 9975 999 898875 8999999999999999999999999 9999988764
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-40 Score=232.20 Aligned_cols=109 Identities=39% Similarity=0.784 Sum_probs=104.9
Q ss_pred HHHHHHHHHHhhcCCCCCeeEe--ecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccc--ccee
Q 031951 3 SKRIIKELRDLQSDPPSSCSAG--PIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVF--HPNI 78 (150)
Q Consensus 3 ~~Rl~~E~~~l~~~~~~~~~~~--~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~--HPnv 78 (150)
.+||++|++++++++++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++| ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 3999999999999999999965 78899999999999999999999999999999999999999999999999 9999
Q ss_pred eCCCceeccCCCCCCCCCCCHHHHHHHHHHhhc
Q 031951 79 NNNGSICLDILKDQWSPALTISKVLLSICSLLT 111 (150)
Q Consensus 79 ~~~G~vcl~~l~~~W~p~~~~~~il~~i~~ll~ 111 (150)
+.+|+||+++|.++|+|++++.+||.+|++||.
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 999999999999999999999999999999984
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=243.79 Aligned_cols=123 Identities=30% Similarity=0.486 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeEee-cCCC--ceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccce
Q 031951 2 ASKRIIKELRDLQSDPPSS-CSAGP-IAEG--LFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPN 77 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~~~~-~~~~~-~~~~--~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 77 (150)
+.+||++|+++|+++++.| +.+.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 5799999999999998888 66776 3454 899999999999999999999999999999999999999999999999
Q ss_pred ee-CCCceeccCCC--CCCCCCCCHHHHHHHHHHhhcC-CCCCCCCCchHHHH
Q 031951 78 IN-NNGSICLDILK--DQWSPALTISKVLLSICSLLTD-PNPDDDDPLVPEIA 126 (150)
Q Consensus 78 v~-~~G~vcl~~l~--~~W~p~~~~~~il~~i~~ll~~-~~~~~~~~~n~~aa 126 (150)
|+ .+|.||++++. ++|+|+++|.+||.+|+++|.+ ||++ +|+|.|||
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~--~P~n~eaa 166 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMK--LPQPPEGQ 166 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSS--SCCCSSCC
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCC--CCCCcccc
Confidence 99 79999999997 8999999999999999999974 8888 99999886
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-39 Score=238.50 Aligned_cols=136 Identities=26% Similarity=0.576 Sum_probs=112.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeC
Q 031951 1 MASKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINN 80 (150)
Q Consensus 1 ~a~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~ 80 (150)
.|.+||++|+++|+++++.|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ ||||+.
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~ 91 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC 91 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc
Confidence 378999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCceeccCC---CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCc-hHHHHHHHHHCHHHHHH
Q 031951 81 NGSICLDIL---KDQWSPALTISKVLLSICSLLTDPNPDDDDPL-VPEIAHLCKTDKLKYEN 138 (150)
Q Consensus 81 ~G~vcl~~l---~~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~-n~~aa~~~~~~~~~f~~ 138 (150)
+|.||++++ .++|+|+++|.+||.+|+++|.+|+++..+.. .....+.+..+...|+.
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~~ 153 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNL 153 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHH
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCcccccChHHHHHHHHHHHHHhh
Confidence 999999999 68999999999999999999999998744332 22333344444444433
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=1.1e-39 Score=239.88 Aligned_cols=137 Identities=25% Similarity=0.466 Sum_probs=122.4
Q ss_pred hHHHHHHHHHHhhcCC---CCCeeEeecCCCceeEEEEEECC-CCCCCCC-----------cEEEEEEeCCCCCCCCCCe
Q 031951 2 ASKRIIKELRDLQSDP---PSSCSAGPIAEGLFRWQATVIGP-TDSPYAG-----------GIFHVAINFPPDYPFKPPK 66 (150)
Q Consensus 2 a~~Rl~~E~~~l~~~~---~~~~~~~~~~~~~~~w~~~i~gp-~~t~y~g-----------g~f~~~i~fp~~YP~~pP~ 66 (150)
|.+||++|+++|++++ +.++++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||+
T Consensus 28 a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~ 107 (186)
T 1zuo_A 28 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPF 107 (186)
T ss_dssp HHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCe
Confidence 6799999999999988 68899999999999999999997 9999998 8999999999999999999
Q ss_pred eEEecccccc-eeeCCCceeccCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHH
Q 031951 67 VAFKTKVFHP-NINNNGSICLDILK-DQWSPALTISKVLLSICSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWT 144 (150)
Q Consensus 67 i~f~t~i~HP-nv~~~G~vcl~~l~-~~W~p~~~~~~il~~i~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~ 144 (150)
|+|.|++||| ||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++. . .+..++.+|.++++..+
T Consensus 108 V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~--~--------~~~~~~~~Y~~~~~~~~ 177 (186)
T 1zuo_A 108 VRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKAR--V--------QFGANKNQYNLARAQQS 177 (186)
T ss_dssp EEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCE--E--------CTTCCTTCCCHHHHHHH
T ss_pred EEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChh--H--------hhccCHHHHhHHHHHHH
Confidence 9999999999 69999999999996 79999999999999999999988764 2 23335667777777777
Q ss_pred HHhc
Q 031951 145 QKYA 148 (150)
Q Consensus 145 ~~~a 148 (150)
.+.+
T Consensus 178 ~~~~ 181 (186)
T 1zuo_A 178 YNSI 181 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=3.3e-29 Score=178.33 Aligned_cols=96 Identities=18% Similarity=0.313 Sum_probs=89.5
Q ss_pred HHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCc----------EEEEEEeCCCCCCCCCCeeEEecc
Q 031951 3 SKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGG----------IFHVAINFPPDYPFKPPKVAFKTK 72 (150)
Q Consensus 3 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~i~f~t~ 72 (150)
.+||++|++.|++ ++.+.++|++.|.+.+.||+||+|+|| .|.+++.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7999999999998 477788999999999999999999999 999999999999999999999998
Q ss_pred -cccceeeCCCceeccCC-CC---CCCCCCCHHHHHH
Q 031951 73 -VFHPNINNNGSICLDIL-KD---QWSPALTISKVLL 104 (150)
Q Consensus 73 -i~HPnv~~~G~vcl~~l-~~---~W~p~~~~~~il~ 104 (150)
+||||||.+|+|||+++ .+ .|+|+++|.++|.
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 99999999999999999 43 4569999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.84 E-value=6.6e-21 Score=136.48 Aligned_cols=112 Identities=24% Similarity=0.411 Sum_probs=91.9
Q ss_pred HHHHHHHHHhhcCCC---CCeeEeecCCCceeEEEEEECCCCCCCCCcE---EEEEEeCCCCCCCCCCeeEEecc-----
Q 031951 4 KRIIKELRDLQSDPP---SSCSAGPIAEGLFRWQATVIGPTDSPYAGGI---FHVAINFPPDYPFKPPKVAFKTK----- 72 (150)
Q Consensus 4 ~Rl~~E~~~l~~~~~---~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~---f~~~i~fp~~YP~~pP~i~f~t~----- 72 (150)
+|..+|..++.+.-+ +...+...++....+-+.+.|.-.++|+|+. |.+.|.||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 567788887755332 2223344556677777777777779999999 88999999999999999988651
Q ss_pred -----cc-cceeeCCCceeccCCCCCCCC-CCCHHHHHHHHHHhhcCCCCC
Q 031951 73 -----VF-HPNINNNGSICLDILKDQWSP-ALTISKVLLSICSLLTDPNPD 116 (150)
Q Consensus 73 -----i~-HPnv~~~G~vcl~~l~~~W~p-~~~~~~il~~i~~ll~~~~~~ 116 (150)
|+ |||||.+|+||+++| ++|++ +.++.++|.+|+++|.+|+++
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~~ll~~l~~lf~ep~~d 160 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLIMVVQELMSLLHEPPQD 160 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHHHHHHHHHHTTSCCCCC
T ss_pred ccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 77 999999999999999 57999 679999999999999999987
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.79 E-value=1.3e-20 Score=131.37 Aligned_cols=95 Identities=23% Similarity=0.415 Sum_probs=79.2
Q ss_pred HHHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCc----------EEEEEEeCCCCCCCCCCeeEEecc
Q 031951 3 SKRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGG----------IFHVAINFPPDYPFKPPKVAFKTK 72 (150)
Q Consensus 3 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~i~f~t~ 72 (150)
..||..||+.|-+ +++..+++-..|...+.||+||+|.|+ .|.+++.||.+||..||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 4799999999876 455555666789999999999999999 899999999999999999999995
Q ss_pred -cccceeeCCCceeccCCC-CCC---CCCCCHHHHH
Q 031951 73 -VFHPNINNNGSICLDILK-DQW---SPALTISKVL 103 (150)
Q Consensus 73 -i~HPnv~~~G~vcl~~l~-~~W---~p~~~~~~il 103 (150)
.+||++|.+|+|||+++. .-| .|.++|...|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 899999999999999871 222 3445666654
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.59 E-value=1.9e-15 Score=106.39 Aligned_cols=80 Identities=21% Similarity=0.500 Sum_probs=71.0
Q ss_pred CCceeEEEEEECCCCCCCCCcEEEE--EEeCCCCCCCCCCeeEEecc------cccceeeCCCceeccCCCCCCCC-CCC
Q 031951 28 EGLFRWQATVIGPTDSPYAGGIFHV--AINFPPDYPFKPPKVAFKTK------VFHPNINNNGSICLDILKDQWSP-ALT 98 (150)
Q Consensus 28 ~~~~~w~~~i~gp~~t~y~gg~f~~--~i~fp~~YP~~pP~i~f~t~------i~HPnv~~~G~vcl~~l~~~W~p-~~~ 98 (150)
.++..|.++|. .+|+|+.|.+ .|.||++||++||.+ |.++ ..|||||.+|+||+++|.+ |++ ..+
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~sn 124 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQSD 124 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTCC
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCCC
Confidence 67899999998 6799999985 999999999999999 6655 5899999999999999955 997 789
Q ss_pred HHHHHHHHHHhhcCC
Q 031951 99 ISKVLLSICSLLTDP 113 (150)
Q Consensus 99 ~~~il~~i~~ll~~~ 113 (150)
+.+++..+++.|.+.
T Consensus 125 L~~ll~~l~~~F~~e 139 (146)
T 3obq_A 125 LLGLIQVMIVVFGDE 139 (146)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999998653
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.02 E-value=0.0066 Score=40.84 Aligned_cols=66 Identities=18% Similarity=0.169 Sum_probs=43.1
Q ss_pred HHHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEec
Q 031951 4 KRIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKT 71 (150)
Q Consensus 4 ~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t 71 (150)
.+...|+..|+.--+..+.+. .+....+.+.|....+..-..-.+.+.+.||++||.+||.|...+
T Consensus 13 e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 13 EEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 456788888887555545432 223455666665222222233478999999999999999997654
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.027 Score=38.30 Aligned_cols=66 Identities=15% Similarity=0.223 Sum_probs=41.8
Q ss_pred HHHHHHHHhhcCCCCCeeEeecC------CCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEec
Q 031951 5 RIIKELRDLQSDPPSSCSAGPIA------EGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKT 71 (150)
Q Consensus 5 Rl~~E~~~l~~~~~~~~~~~~~~------~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t 71 (150)
+-..|+..|+.--+..+.+.... +....+.+.|....+ .-..-.+.+.+.+|++||..||.|.+.+
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 45677777877554444332111 124566777763222 2123478899999999999999998764
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.40 E-value=0.023 Score=38.10 Aligned_cols=68 Identities=15% Similarity=0.168 Sum_probs=43.2
Q ss_pred HHHHHHHHhhcCCCCCeeEeecC--CCceeEEEEEECCCCCCC--CCcEEEEEEeCCCCCCCCCCeeEEecc
Q 031951 5 RIIKELRDLQSDPPSSCSAGPIA--EGLFRWQATVIGPTDSPY--AGGIFHVAINFPPDYPFKPPKVAFKTK 72 (150)
Q Consensus 5 Rl~~E~~~l~~~~~~~~~~~~~~--~~~~~w~~~i~gp~~t~y--~gg~f~~~i~fp~~YP~~pP~i~f~t~ 72 (150)
+...|+..|+.--+..+.+.... .+...+.+.|..+.+..- ..-.+.+.+.+|++||..+|.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 46788888887655555543222 234455555642222111 124788999999999999999987753
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.18 E-value=0.09 Score=37.91 Aligned_cols=84 Identities=14% Similarity=0.261 Sum_probs=61.1
Q ss_pred HHHHHHHHhhcCCCCCeeEeecCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccccceeeCCCce
Q 031951 5 RIIKELRDLQSDPPSSCSAGPIAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVFHPNINNNGSI 84 (150)
Q Consensus 5 Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPnv~~~G~v 84 (150)
+|.+|+.++-=+. +.-.+.++....+.+.. =.|..+.++|.++.+||.++|.+...-|. |
T Consensus 5 ~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D-----~~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~-------- 64 (186)
T 3zqs_A 5 SLIEEIGTLGWDK-----LVYADTCFSTIKLKAED-----ASGREHLITLKLKAKYPAESPDYFVDFPV--P-------- 64 (186)
T ss_dssp SHHHHHHHHCGGG-----EEEECTTSSEEEEEEEC-----TTSCEEEEEEECCTTTTTSCCEEECCCSS--C--------
T ss_pred HHHHHHHHhCCce-----eeeecCCccEEEEEEEe-----CCCCeEEEEEEECCCCCCCCCeeEEcCCC--C--------
Confidence 6778888772211 23335678888888883 35688999999999999999988665443 1
Q ss_pred eccCCCCCCCCCCCHHHHHHHHHHhhcC
Q 031951 85 CLDILKDQWSPALTISKVLLSICSLLTD 112 (150)
Q Consensus 85 cl~~l~~~W~p~~~~~~il~~i~~ll~~ 112 (150)
+.-.|++..++.+++...+..+..
T Consensus 65 ----~~~~w~~~ssL~~v~~qF~~~Le~ 88 (186)
T 3zqs_A 65 ----FCASWTPQSSLISIYSQFLAAIES 88 (186)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred ----cccccCCCccHHHHHHHHHHHHHH
Confidence 124699999999998877777653
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.89 E-value=0.054 Score=36.30 Aligned_cols=65 Identities=12% Similarity=0.061 Sum_probs=40.0
Q ss_pred HHHHHHHHhhcCCCC--CeeEee-cCCCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEe
Q 031951 5 RIIKELRDLQSDPPS--SCSAGP-IAEGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFK 70 (150)
Q Consensus 5 Rl~~E~~~l~~~~~~--~~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~ 70 (150)
+...|+..|+.--+. .+.+.. ...+...+.+.|.. .+..-..-.+.+.+.+|.+||..+|.|...
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 456788777764322 333221 11234577777763 221111247899999999999999998654
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=95.72 E-value=0.08 Score=36.81 Aligned_cols=23 Identities=13% Similarity=0.428 Sum_probs=20.8
Q ss_pred EEEEEEeCCCCCCCCCCeeEEec
Q 031951 49 IFHVAINFPPDYPFKPPKVAFKT 71 (150)
Q Consensus 49 ~f~~~i~fp~~YP~~pP~i~f~t 71 (150)
.+.++|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999997654
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.67 E-value=0.16 Score=34.20 Aligned_cols=66 Identities=18% Similarity=0.162 Sum_probs=40.5
Q ss_pred HHHHHHHHHhhcCCCCCeeEeecCC-----CceeEEEEEECCCCC--CCCCcEEEEEEeCCCCCCCCCCeeEEe
Q 031951 4 KRIIKELRDLQSDPPSSCSAGPIAE-----GLFRWQATVIGPTDS--PYAGGIFHVAINFPPDYPFKPPKVAFK 70 (150)
Q Consensus 4 ~Rl~~E~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~~t--~y~gg~f~~~i~fp~~YP~~pP~i~f~ 70 (150)
.+...|+..|+.--+..+....... ......+.|. +.+. .-..-.+.+.+.||++||..+|.|...
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 13 QRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp HHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred HHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 3567788888875554444322111 1345555665 3221 001246899999999999999999874
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.65 E-value=0.14 Score=35.39 Aligned_cols=25 Identities=24% Similarity=0.542 Sum_probs=21.5
Q ss_pred cEEEEEEeCCCCCCCCCCeeEEecc
Q 031951 48 GIFHVAINFPPDYPFKPPKVAFKTK 72 (150)
Q Consensus 48 g~f~~~i~fp~~YP~~pP~i~f~t~ 72 (150)
-.+.+.+.+|.+||..||.|...+.
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999986654
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=81.40 E-value=0.3 Score=32.11 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=0.0
Q ss_pred CCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 119 DPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 119 ~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
.|...+.|++|++|++.|...|+.|+.-+|.
T Consensus 25 ~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 25 EAVDAATAEKVFKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp -------------------------------
T ss_pred CchhHHHHHHHHhchhccccccccccccCcC
Confidence 6788899999999999999999999966663
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=79.08 E-value=1.5 Score=20.38 Aligned_cols=19 Identities=37% Similarity=0.672 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhhcCCCCCe
Q 031951 3 SKRIIKELRDLQSDPPSSC 21 (150)
Q Consensus 3 ~~Rl~~E~~~l~~~~~~~~ 21 (150)
+.||+-|+...+.+|++|.
T Consensus 7 ldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 7 LDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHhhhccCCCCCC
Confidence 5799999999999999874
No 66
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=36.94 E-value=32 Score=24.86 Aligned_cols=26 Identities=15% Similarity=0.382 Sum_probs=22.5
Q ss_pred CCCcEEEEEEeCCCCCCC-----CCCeeEEe
Q 031951 45 YAGGIFHVAINFPPDYPF-----KPPKVAFK 70 (150)
Q Consensus 45 y~gg~f~~~i~fp~~YP~-----~pP~i~f~ 70 (150)
-+.|.|.|+-.+|--||. .||.|.|.
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 356899999999999998 79998875
No 67
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=30.35 E-value=34 Score=17.92 Aligned_cols=13 Identities=31% Similarity=0.549 Sum_probs=10.6
Q ss_pred HHHHHHHHHHhhc
Q 031951 3 SKRIIKELRDLQS 15 (150)
Q Consensus 3 ~~Rl~~E~~~l~~ 15 (150)
++||..|++.+.+
T Consensus 30 ~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 30 IKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 5899999998763
No 68
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=29.38 E-value=52 Score=18.94 Aligned_cols=20 Identities=5% Similarity=0.150 Sum_probs=17.0
Q ss_pred chHHHHHHHHHCHHHHHHHH
Q 031951 121 LVPEIAHLCKTDKLKYENLA 140 (150)
Q Consensus 121 ~n~~aa~~~~~~~~~f~~~~ 140 (150)
-|++.+++..+|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 57788999999999998865
No 69
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=27.93 E-value=64 Score=19.42 Aligned_cols=41 Identities=10% Similarity=0.116 Sum_probs=29.7
Q ss_pred HHhhcCCCCCCCCCchHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 107 CSLLTDPNPDDDDPLVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 107 ~~ll~~~~~~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
+.|+..-++. ..+.+++..++.+=.+.|...+-..+.+.|+
T Consensus 12 ~~Lv~~idp~--~~ld~~vee~ll~lADdFV~~V~~~ac~lAK 52 (76)
T 1h3o_B 12 QDLVREVDPN--EQLDEDVEEMLLQIADDFIESVVTAACQLAR 52 (76)
T ss_dssp HHHHHHHCSS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3343333455 7778888888888889999888888777663
No 70
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=26.46 E-value=52 Score=19.65 Aligned_cols=22 Identities=5% Similarity=0.128 Sum_probs=18.4
Q ss_pred CchHHHHHHHHHCHHHHHHHHH
Q 031951 120 PLVPEIAHLCKTDKLKYENLAR 141 (150)
Q Consensus 120 ~~n~~aa~~~~~~~~~f~~~~~ 141 (150)
.-|++++++...|+++|.+...
T Consensus 38 ~~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 38 RENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TTCHHHHHHHHTTHHHHHHHHH
T ss_pred hHCHHHHHHHHHCHHHHHHHHc
Confidence 3578899999999999998764
No 71
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=23.74 E-value=58 Score=17.59 Aligned_cols=43 Identities=19% Similarity=0.346 Sum_probs=29.1
Q ss_pred HHHHHHhhcCCCCCCCCC-chHHHHHHHHHCHHHHHHHHHHHHHHhcC
Q 031951 103 LLSICSLLTDPNPDDDDP-LVPEIAHLCKTDKLKYENLARNWTQKYAM 149 (150)
Q Consensus 103 l~~i~~ll~~~~~~~~~~-~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (150)
|..|..-|.+|+ +| -+..+-..++.|+.--...+|.-..+|++
T Consensus 3 LqqLl~tlksp~----sp~qqqqvl~ILksnPqLMAAfIkQR~~~y~~ 46 (47)
T 1zoq_C 3 LQDLLRTLKSPS----SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 46 (47)
T ss_dssp HHHHHHTCCSCC----CHHHHHHHHHHHHTCHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHhcCCC----CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence 444555555554 33 34456678899999888888887777764
No 72
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=23.11 E-value=92 Score=25.78 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=22.7
Q ss_pred hHHHHHHHHHCHHHHHHHHHHHHHHhc
Q 031951 122 VPEIAHLCKTDKLKYENLARNWTQKYA 148 (150)
Q Consensus 122 n~~aa~~~~~~~~~f~~~~~~~~~~~a 148 (150)
-.|+.++..+|+++|.++|++..+++.
T Consensus 277 ~ee~~~l~~~dp~~~~~~~~~Sm~rhv 303 (552)
T 2fkn_A 277 LDEADRLRQDTPELYVRLAKQSMKKHV 303 (552)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 356778888999999999999988764
No 73
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=22.91 E-value=93 Score=25.74 Aligned_cols=27 Identities=22% Similarity=0.165 Sum_probs=22.7
Q ss_pred hHHHHHHHHHCHHHHHHHHHHHHHHhc
Q 031951 122 VPEIAHLCKTDKLKYENLARNWTQKYA 148 (150)
Q Consensus 122 n~~aa~~~~~~~~~f~~~~~~~~~~~a 148 (150)
-.|+.++..+|+++|.+.|++..+++.
T Consensus 276 ~ee~~~l~~~dp~~~~~~~~~Sm~rhv 302 (551)
T 1x87_A 276 LDEAAELRARDPKQYIARAKQSIAAHV 302 (551)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 356778888999999999999988764
No 74
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=22.62 E-value=95 Score=25.73 Aligned_cols=27 Identities=7% Similarity=-0.059 Sum_probs=22.7
Q ss_pred hHHHHHHHHHCHHHHHHHHHHHHHHhc
Q 031951 122 VPEIAHLCKTDKLKYENLARNWTQKYA 148 (150)
Q Consensus 122 n~~aa~~~~~~~~~f~~~~~~~~~~~a 148 (150)
-.|+.++..+|+++|.+.|++..+++.
T Consensus 281 ~ee~~~l~~~dp~~~~~~~~~Sm~rhv 307 (557)
T 1uwk_A 281 WEQYRDRAQTEPAAVVKAAKQSMAVHV 307 (557)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 356778888999999999999888764
No 75
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=21.66 E-value=1.3e+02 Score=17.70 Aligned_cols=30 Identities=13% Similarity=-0.041 Sum_probs=24.1
Q ss_pred CCchHHHHHHHHHCHHHHHHHHHHHHHHhc
Q 031951 119 DPLVPEIAHLCKTDKLKYENLARNWTQKYA 148 (150)
Q Consensus 119 ~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a 148 (150)
..++.++++.+.++-+...+.+-+.+.+++
T Consensus 22 ~~lsddaa~~LA~dvEyr~~eI~qeA~kfm 51 (70)
T 1taf_B 22 GSLSDDAAKELAEDVSIKLKRIVQDAAKFM 51 (70)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467789999999998888887777777665
No 76
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=21.57 E-value=2.1e+02 Score=19.97 Aligned_cols=45 Identities=24% Similarity=0.367 Sum_probs=32.7
Q ss_pred CCceeEEEEEECCCCCCCCCcEEEEEEeCCCCCCCCCCeeEEecccc
Q 031951 28 EGLFRWQATVIGPTDSPYAGGIFHVAINFPPDYPFKPPKVAFKTKVF 74 (150)
Q Consensus 28 ~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~ 74 (150)
+....|.+.+.|+.+.-...-+=++...+.+.||. |.-.+..+.|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 45679999999987654445577888999999975 6555555433
No 77
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=21.51 E-value=49 Score=15.66 Aligned_cols=12 Identities=17% Similarity=0.595 Sum_probs=7.9
Q ss_pred HHHHHHHHHhhc
Q 031951 4 KRIIKELRDLQS 15 (150)
Q Consensus 4 ~Rl~~E~~~l~~ 15 (150)
|++++||-.|++
T Consensus 13 R~lLkeyY~L~~ 24 (26)
T 2c5k_P 13 RLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhhhc
Confidence 568888888765
No 78
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=21.14 E-value=54 Score=24.19 Aligned_cols=25 Identities=20% Similarity=0.495 Sum_probs=21.9
Q ss_pred CCcEEEEEEeCCCCCCC-------CCCeeEEe
Q 031951 46 AGGIFHVAINFPPDYPF-------KPPKVAFK 70 (150)
Q Consensus 46 ~gg~f~~~i~fp~~YP~-------~pP~i~f~ 70 (150)
+.|.|.|+-.+|--||. .||.|.|.
T Consensus 133 ~~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 133 SDGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 45899999999999997 78999885
No 79
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=21.00 E-value=1.5e+02 Score=18.46 Aligned_cols=24 Identities=25% Similarity=0.347 Sum_probs=19.2
Q ss_pred CCcEEEEEEeCCCCCCCCCCeeEEe
Q 031951 46 AGGIFHVAINFPPDYPFKPPKVAFK 70 (150)
Q Consensus 46 ~gg~f~~~i~fp~~YP~~pP~i~f~ 70 (150)
.+..+...|.|+..|+. +|+|.+.
T Consensus 27 g~R~~~~~V~F~~~F~~-~P~V~v~ 50 (101)
T 2ccv_A 27 NTRELAKNITFASPYCR-PPVVLLS 50 (101)
T ss_dssp SCEEEEEEEECSSCCSS-CCEEEEE
T ss_pred cceEEEEEeEeCcccCC-CCEEEEE
Confidence 33468889999999995 9998774
No 80
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=20.65 E-value=56 Score=24.12 Aligned_cols=26 Identities=23% Similarity=0.565 Sum_probs=22.0
Q ss_pred CCCcEEEEEEeCCCCCCC-------CCCeeEEe
Q 031951 45 YAGGIFHVAINFPPDYPF-------KPPKVAFK 70 (150)
Q Consensus 45 y~gg~f~~~i~fp~~YP~-------~pP~i~f~ 70 (150)
-+.|.|.|+-.+|--||. .||.|.|.
T Consensus 133 D~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 133 DDNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp CTTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 355899999999999994 79999875
No 81
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=20.33 E-value=2.3e+02 Score=21.23 Aligned_cols=24 Identities=33% Similarity=0.769 Sum_probs=19.6
Q ss_pred CCCeeEEecccccceeeCCC--ceec
Q 031951 63 KPPKVAFKTKVFHPNINNNG--SICL 86 (150)
Q Consensus 63 ~pP~i~f~t~i~HPnv~~~G--~vcl 86 (150)
.||.+.|....-.+.+|+|| -+|.
T Consensus 214 TPPVl~ftNt~TTvLLDENGVGpLCk 239 (277)
T 3s7v_A 214 TPPVVSYGNNSTIPLLDENGIGILCL 239 (277)
T ss_dssp CCCEEEEESSCCEECCCTTSCCEECT
T ss_pred CCCeEEecCceeEEEEcCCCcccccc
Confidence 48999999888888999875 4775
No 82
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=20.30 E-value=65 Score=23.05 Aligned_cols=23 Identities=13% Similarity=0.177 Sum_probs=20.7
Q ss_pred cEEEEEEeCCCCCCCC-----CCeeEEe
Q 031951 48 GIFHVAINFPPDYPFK-----PPKVAFK 70 (150)
Q Consensus 48 g~f~~~i~fp~~YP~~-----pP~i~f~ 70 (150)
|.|.|+=.+|--||.. ||.|.|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8999999999999997 8888775
Done!