BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031953
(150 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4
PE=2 SV=2
Length = 187
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/140 (92%), Positives = 135/140 (96%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSPSKRREMD+MKLMMSDYKVE INDGMQEFYVEFNGPK+S YQGGVWKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPS+GF+ KIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61 YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 121 NGEAAALMMRDRTAYDQRVK 140
NGEAAALMMRDR AY+QRVK
Sbjct: 121 NGEAAALMMRDRPAYEQRVK 140
>sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5
PE=2 SV=2
Length = 185
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 127/140 (90%), Positives = 135/140 (96%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSPSKRREMDLMKLMMSDYKVEMINDGMQEF+VEF+GPK+S Y+GGVWKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61 YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 121 NGEAAALMMRDRTAYDQRVK 140
NGEAAALMMRDR Y+QRVK
Sbjct: 121 NGEAAALMMRDRPTYEQRVK 140
>sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4
PE=1 SV=1
Length = 184
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 121/140 (86%), Positives = 133/140 (95%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSPSKRREMDLMKLMMSDYKV+MINDGM EF+V F+GPK+S YQGGVWK+RVEL +AYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPSIGF NKIYHPNVDE+SGSVCLDVINQTWSPMFDLVN+FEVFLPQLLLYPNPSDPL
Sbjct: 61 YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120
Query: 121 NGEAAALMMRDRTAYDQRVK 140
NGEAA+LMMRD+ AY+ +VK
Sbjct: 121 NGEAASLMMRDKNAYENKVK 140
>sp|P42750|UBC6_ARATH Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6
PE=2 SV=2
Length = 183
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 129/140 (92%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
M+SPSKRREMD+MKLMMSDYKV+ +ND +Q FYV F+GP +S YQGGVWKI+VELP+AYP
Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP
Sbjct: 61 YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120
Query: 121 NGEAAALMMRDRTAYDQRVK 140
NGEAA+L+MRDR AY+ +VK
Sbjct: 121 NGEAASLLMRDRAAYELKVK 140
>sp|Q9P7R4|UBC8_SCHPO Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1
Length = 184
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 121/140 (86%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSP +R E D+MKL+MSDY+V ++ND MQEFYV F+GP E+ Y GG+WK+ VELP YP
Sbjct: 1 MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
+KSPSIGFVN+I+HPN+DELSGSVCLDVINQTWSPMFD++N+FEVFLPQLL YPN SDPL
Sbjct: 61 WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPL 120
Query: 121 NGEAAALMMRDRTAYDQRVK 140
NGEAAAL++R+ Y +V+
Sbjct: 121 NGEAAALLLREPNTYYAKVR 140
>sp|P28263|UBC8_YEAST Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC8 PE=1 SV=2
Length = 218
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 115/140 (82%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSS +R E D+MKL+MSD++V++IND MQEF+V+F GPK++ Y+ GVW++ VELPD YP
Sbjct: 1 MSSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPSIGFVNKI+HPN+D SGS+CLDVIN TWSP++DL+N+ E +P LL PN SDPL
Sbjct: 61 YKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPL 120
Query: 121 NGEAAALMMRDRTAYDQRVK 140
N EAA L +RD+ Y++++K
Sbjct: 121 NNEAATLQLRDKKLYEEKIK 140
>sp|P62257|UBE2H_MOUSE Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2
SV=1
Length = 183
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 114/143 (79%), Gaps = 4/143 (2%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V+F GP+ + Y+GGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPS 117
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQTW+ ++DL N+FE FLPQLL YPNP
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 119
Query: 118 DPLNGEAAALMMRDRTAYDQRVK 140
DPLNG+AAA+ + Y Q++K
Sbjct: 120 DPLNGDAAAMYLHRPEEYKQKIK 142
>sp|P62256|UBE2H_HUMAN Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1
SV=1
Length = 183
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 114/143 (79%), Gaps = 4/143 (2%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V+F GP+ + Y+GGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPS 117
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQTW+ ++DL N+FE FLPQLL YPNP
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 119
Query: 118 DPLNGEAAALMMRDRTAYDQRVK 140
DPLNG+AAA+ + Y Q++K
Sbjct: 120 DPLNGDAAAMYLHRPEEYKQKIK 142
>sp|Q32LN1|UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1
Length = 183
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 114/143 (79%), Gaps = 4/143 (2%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V+F GP+ + Y+GGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPS 117
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQTW+ ++DL N+FE FLPQLL YPNP
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 119
Query: 118 DPLNGEAAALMMRDRTAYDQRVK 140
DPLNG+AAA+ + Y Q++K
Sbjct: 120 DPLNGDAAAMYLHRPEEYKQKIK 142
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEM----INDGMQEFYVEFNGPKESSYQGGVWKIRVELP 56
M++PS+RR M K + D + D + + GP+E+ ++ G +K+ +E
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ + + LL PNP
Sbjct: 61 EEYPNKPPTVKFISKMFHPNV-YADGSICLDILQNRWSPTYDVAAIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALMMRDRTAYDQRVK 140
+ P N AA L +R Y++RV+
Sbjct: 119 NSPANSLAAQLYQENRREYEKRVQ 142
>sp|O74549|UBC12_SCHPO NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ubc12 PE=3 SV=1
Length = 177
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Query: 39 PKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFD 98
P E Y+GG +K R+++ D YP+ P + +NKIYHPN+D + G+VCL+++ Q W+P+ +
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNID-IEGNVCLNILRQDWNPVLN 118
Query: 99 LVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
L N V L L L PN DPLN EAAA + +D + RV+
Sbjct: 119 L-NSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVR 159
>sp|Q94490|UBCB_DICDI Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum
GN=ubcB PE=1 SV=1
Length = 148
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Query: 11 DLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVN 70
D++K S +++D +Q++ GP+ S ++ GV+ + +++P YP+K P++ F
Sbjct: 13 DMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTT 72
Query: 71 KIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMR 130
KIYHPN+ G++C +V + TWSP +++V + +L PNP +PL E A
Sbjct: 73 KIYHPNIKTSDGAICAEVFS-TWSPQLKILDVLTT-IRSILTDPNPDNPLETEIAQQFKT 130
Query: 131 DRTAYDQRVK 140
DR A+++ K
Sbjct: 131 DRNAFNKTAK 140
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP ES YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
CLD++ WSP + V + + LL PNP DPL E A + DR Y+Q +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAR 139
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 85/146 (58%), Gaps = 8/146 (5%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMI-----NDGMQEFYVEFNGPKESSYQGGVWKIRVEL 55
MS+P++RR M K + D V + N+ MQ V F GP+ + ++ G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIF-GPEGTPFEDGTFKLVIEF 59
Query: 56 PDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPN 115
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ ++ + LL PN
Sbjct: 60 SEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPN 117
Query: 116 PSDPLNGEAAALMMRDRTAYDQRVKG 141
P+ P N +AA L ++ Y++RV
Sbjct: 118 PNSPANSQAAQLYQENKREYEKRVSA 143
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 85/146 (58%), Gaps = 8/146 (5%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMI-----NDGMQEFYVEFNGPKESSYQGGVWKIRVEL 55
MS+P++RR M K + D V + N+ MQ V F GP+ + ++ G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIF-GPEGTPFEDGTFKLVIEF 59
Query: 56 PDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPN 115
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ ++ + LL PN
Sbjct: 60 SEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPN 117
Query: 116 PSDPLNGEAAALMMRDRTAYDQRVKG 141
P+ P N +AA L ++ Y++RV
Sbjct: 118 PNSPANSQAAQLYQENKREYEKRVSA 143
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 85/146 (58%), Gaps = 8/146 (5%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMI-----NDGMQEFYVEFNGPKESSYQGGVWKIRVEL 55
MS+P++RR M K + D V + N+ MQ V F GP+ + ++ G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIF-GPEGTPFEDGTFKLVIEF 59
Query: 56 PDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPN 115
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ ++ + LL PN
Sbjct: 60 SEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPN 117
Query: 116 PSDPLNGEAAALMMRDRTAYDQRVKG 141
P+ P N +AA L ++ Y++RV
Sbjct: 118 PNSPANSQAAQLYQENKREYEKRVSA 143
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 85/146 (58%), Gaps = 8/146 (5%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMI-----NDGMQEFYVEFNGPKESSYQGGVWKIRVEL 55
MS+P++RR M K + D V + N+ MQ V F GP+ + ++ G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIF-GPEGTPFEDGTFKLVIEF 59
Query: 56 PDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPN 115
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ ++ + LL PN
Sbjct: 60 SEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPN 117
Query: 116 PSDPLNGEAAALMMRDRTAYDQRVKG 141
P+ P N +AA L ++ Y++RV
Sbjct: 118 PNSPANSQAAQLYQENKREYEKRVSA 143
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 85/146 (58%), Gaps = 8/146 (5%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMI-----NDGMQEFYVEFNGPKESSYQGGVWKIRVEL 55
MS+P++RR M K + D V + N+ MQ V F GP+ + ++ G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIF-GPEGTPFEDGTFKLVIEF 59
Query: 56 PDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPN 115
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ ++ + LL PN
Sbjct: 60 SEEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPN 117
Query: 116 PSDPLNGEAAALMMRDRTAYDQRVKG 141
P+ P N +AA L ++ Y++RV
Sbjct: 118 PNSPANSQAAQLYQENKREYEKRVSA 143
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEM----INDGMQEFYVEFNGPKESSYQGGVWKIRVELP 56
MS+P++RR M K + D + ++ + + GP ++ ++ G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV+K++HPNV G +CLD++ WSP +D V+ + LL PNP
Sbjct: 61 EEYPNKPPTVRFVSKVFHPNV-YADGGICLDILQNRWSPTYD-VSAILTSIQSLLSDPNP 118
Query: 117 SDPLNGEAAALMMRDRTAYDQRVKG 141
+ P N AA L +R Y++RVK
Sbjct: 119 NSPANSTAAQLYKENRREYEKRVKA 143
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1
SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11
PE=2 SV=2
Length = 148
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 1 MSSPSKRREM-DLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAY 59
M+S +E+ DL K S+ + + M + GP ES Y GGV+ + + P Y
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 60 PYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDP 119
P+K P + F K+YHPN++ +GS+CLD++ + WSP + V + + LL PNP DP
Sbjct: 61 PFKPPKVSFKTKVYHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDP 118
Query: 120 LNGEAAALMMRDRTAYDQRVKG 141
L E A + DR+ Y+ +
Sbjct: 119 LVPEIAHMYKTDRSKYESTARS 140
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3
PE=2 SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1
SV=1
Length = 147
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y++
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
CLD++ WSP + V + + LL PNP DPL + A + D+ Y++ +
Sbjct: 85 CLDILRSQWSPALTVSKVL-LSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAR 139
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
CLD++ WSP + V + + LL PNP DPL + A + D+ Y++ +
Sbjct: 85 CLDILRSQWSPALTVSKVL-LSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAR 139
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
CLD++ WSP + V + + LL PNP DPL + A + D+ Y++ +
Sbjct: 85 CLDILRSQWSPALTVSKVL-LSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAR 139
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
CLD++ WSP + V + + LL PNP DPL + A + D+ Y++ +
Sbjct: 85 CLDILRSQWSPALTVSKVL-LSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAR 139
>sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1
Length = 153
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 26 NDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVC 85
+D ++ F V GP++S Y+ G++++ + LPD YP ++P + F+ KIYHPN+D L G +C
Sbjct: 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRL-GRIC 87
Query: 86 LDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
LDV+ WSP + V + + LL PNP+DPL + A +++ + +
Sbjct: 88 LDVLKTNWSPALQIRTVL-LSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAR 141
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFN----GPKESSYQGGVWKIRVELP 56
MS+P++RR M K + D + + + +N GP+ + ++ G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV+K++HPNV GS+CLD++ WSP +D+ ++ + LL PNP
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALMMRDRTAYDQRVKG 141
+ P N +AA L ++ Y++RV
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSA 143
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFN----GPKESSYQGGVWKIRVELP 56
MS+P++RR M K + D + + + +N GP+ + ++ G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV+K++HPNV GS+CLD++ WSP +D+ ++ + LL PNP
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALMMRDRTAYDQRVKG 141
+ P N +AA L ++ Y++RV
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSA 143
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
CLD++ WSP + V + + LL PNP DPL E A + DR Y++ +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR 139
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S YQGGV+ + + P YP+K P + F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
CLD++ WSP + V + + LL PNP DPL E A DR Y++ +
Sbjct: 85 CLDILRSQWSPALTVSKVL-LSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAR 139
>sp|P21734|UBC1_YEAST Ubiquitin-conjugating enzyme E2 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC1 PE=1 SV=1
Length = 215
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 36 FNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSP 95
F GP + Y+GG + + +E+P YP+K P + F K+YHPN+ ++G++CLD++ WSP
Sbjct: 39 FLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSP 98
Query: 96 MFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQ 137
+ L + + L LL P P+DP + E A +RDR ++++
Sbjct: 99 VITLKSAL-ISLQALLQSPEPNDPQDAEVAQHYLRDRESFNK 139
>sp|Q94A97|UBC35_ARATH Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35
PE=1 SV=1
Length = 153
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 27 DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCL 86
D M+ F V GP +S Y+GGV+K+ + LP+ YP +P + F+ KIYHPN+D+L G +CL
Sbjct: 32 DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICL 90
Query: 87 DVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAA 125
D++ WSP + V + + LL PNP DPL+ A
Sbjct: 91 DILKDKWSPALQIRTVL-LSIQALLSAPNPDDPLSENIA 128
>sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8
PE=1 SV=1
Length = 148
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 1 MSSPSKRREM-DLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAY 59
M+S +E+ DL K + + + M + GP ES Y GGV+ + + P Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 60 PYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDP 119
P+K P + F K++HPN++ +GS+CLD++ + WSP + V + + LL PNP DP
Sbjct: 61 PFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDP 118
Query: 120 LNGEAAALMMRDRTAYDQRVKGNNPSQSYV 149
L E A + DR Y+ + N +Q Y
Sbjct: 119 LVPEIAHMYKTDRAKYEATAR--NWTQKYA 146
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 82/144 (56%), Gaps = 6/144 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFN----GPKESSYQGGVWKIRVELP 56
MS+P+++R M K + D + + +N GP ++ + GG +K+ ++
Sbjct: 1 MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV++++HPN+ GS+CLD++ WSP++D+ + + LL PNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNP 118
Query: 117 SDPLNGEAAALMMRDRTAYDQRVK 140
+ P N EAA + ++ Y++RV+
Sbjct: 119 NSPANSEAARMFSENKREYNRRVR 142
>sp|P70711|U2D2B_RAT Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b
PE=1 SV=1
Length = 147
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ + M + GP +S YQGG + + ++ P YP+K P + F +IYHPNV+ +GS+
Sbjct: 26 VGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
CLD++ WSP + V + + LL PNP DPL E A + DR Y++ +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAR 139
>sp|Q6ZWY6|U2D2B_MOUSE Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2
SV=1
Length = 147
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ + M + GP +S YQGG + + ++ P YP+K P + F +IYHPNV+ +GS+
Sbjct: 26 VGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVK 140
CLD++ WSP + V + + LL PNP DPL E A + DR Y++ +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAR 139
>sp|P35128|UBE2N_DROME Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben
PE=2 SV=1
Length = 151
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 32 FYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQ 91
F+V GP +S ++GGV+K+ + LP+ YP +P + F+ KIYHPN+D L G +CLDV+
Sbjct: 35 FHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL-GRICLDVLKD 93
Query: 92 TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAAL 127
WSP + + + + LL PNP DPL + A L
Sbjct: 94 KWSPALQIRTIL-LSIQALLSAPNPDDPLANDVAEL 128
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFN----GPKESSYQGGVWKIRVELP 56
MS+P+++R M K + D + + +N GP ++ + GG +K+ ++
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV++++HPN+ GS+CLD++ WSP++D+ + + LL PNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNP 118
Query: 117 SDPLNGEAAALMMRDRTAYDQRVK 140
+ P N EAA + + Y++RV+
Sbjct: 119 NSPANSEAARMFSESKREYNRRVR 142
>sp|Q553F3|UBC2_DICDI Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum
GN=ubc2 PE=3 SV=2
Length = 151
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 83/144 (57%), Gaps = 6/144 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEM----INDGMQEFYVEFNGPKESSYQGGVWKIRVELP 56
MS+ ++RR M K + SD + + + + + GP +S ++G +K+ ++
Sbjct: 1 MSTAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP +P++ F++K++HPNV GS+CLD++ WSP++D+ + + LL PNP
Sbjct: 61 EEYPNDAPTVKFLSKMFHPNV-YADGSICLDILQNQWSPIYDIAAIL-TSIQSLLCDPNP 118
Query: 117 SDPLNGEAAALMMRDRTAYDQRVK 140
+ P N E+A L ++ Y+++VK
Sbjct: 119 NSPANSESARLFRENKREYNRKVK 142
>sp|P46595|UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc4 PE=2 SV=1
Length = 147
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 7 RREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSI 66
R DL K S + D + + GP +S Y GGV+ + + P YP+K P +
Sbjct: 8 RELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKV 67
Query: 67 GFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAA 126
F +IYHPN++ +GS+CLD++ WSP + V + + LL PNP DPL E A
Sbjct: 68 NFTTRIYHPNINS-NGSICLDILRDQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAH 125
Query: 127 LMMRDRTAYDQRVK 140
+ DR+ Y+ +
Sbjct: 126 VYKTDRSRYELSAR 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,538,000
Number of Sequences: 539616
Number of extensions: 2500480
Number of successful extensions: 4982
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 4344
Number of HSP's gapped (non-prelim): 330
length of query: 150
length of database: 191,569,459
effective HSP length: 107
effective length of query: 43
effective length of database: 133,830,547
effective search space: 5754713521
effective search space used: 5754713521
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)