BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031954
(150 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P87109|YDK2_SCHPO Probable phospholipase C20G8.02, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC20G8.02 PE=3 SV=1
Length = 757
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 4 HLLQRE----EELLSNWWKEYAECSEGPRERASSIKKSD----VQASLTESVRSAELYEV 55
HLL R L W+ R + IKK+ A +E + + L V
Sbjct: 82 HLLSRSVTDAPSLRVRWFYAVDRPLRKSRTGPTEIKKAKNFLPFSAEDSEHIEKSYLKAV 141
Query: 56 EEERVGVPV---KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVA 112
E + PV + LY V++V R P+YW+G R+LRG WF +G P E++A
Sbjct: 142 ENDGQSEPVNVNEDYLYSVNVVSRELSPIYWDGPVYRILRGTWFFSRGD-KLYPCEENLA 200
Query: 113 EQLEIAYRSQVWHRRTFNLLD 133
Q+E Y + +R N D
Sbjct: 201 TQVEEGYLNSCPYREFSNEKD 221
>sp|Q8NEL9|DDHD1_HUMAN Phospholipase DDHD1 OS=Homo sapiens GN=DDHD1 PE=1 SV=2
Length = 900
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 23 CSE-GPRERASSIKKSDVQASLTESVRSAELYEVEEERV-GVPVKGGLYEVDLVRRHCFP 80
CS GP + D +S E VE + V V+GGLYEVD+ + C+P
Sbjct: 216 CSPTGPASSSGEDDDEDRACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYP 275
Query: 81 VYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLE 116
VYWN D V+RG WF W P+ E+ + +E
Sbjct: 276 VYWNQADKIPVMRGQWFIDG---TWQPLEEEESNLIE 309
>sp|O46606|DDHD1_BOVIN Phospholipase DDHD1 OS=Bos taurus GN=DDHD1 PE=1 SV=1
Length = 875
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 62 VPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLE 116
V V+GGLYEVD+ + C+PVYWN D V+RG WF W P+ E+ + +E
Sbjct: 260 VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFIDG---TWQPLEEEESNLIE 312
>sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=1 SV=2
Length = 998
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 42 SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
S+ +S+ E+Y + + E V + GG Y+V L R VYW + V R WF
Sbjct: 285 SVLDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRMRKSVYWEEEPTEVRRCTWF-Y 343
Query: 99 KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
KG D ++P E+ +E+LE Y+ V WHRR
Sbjct: 344 KGDTDSRFIPYTEEFSEKLEAEYKKAVSTNQWHRR 378
>sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1
Length = 1000
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 42 SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
S+ +S+ E+Y + + E V + GG Y+V L R YW + V R WF
Sbjct: 289 SVFDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWF-Y 347
Query: 99 KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
KG D ++P E+ +E+LE Y+ V WHRR
Sbjct: 348 KGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRR 382
>sp|Q12204|YOR22_YEAST Probable phospholipase YOR022C, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YOR022C PE=1
SV=1
Length = 715
Score = 37.0 bits (84), Expect = 0.047, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 42 SLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGG 101
S+ +S R + + +E R + + L++VDL P YW G +V RG WF
Sbjct: 58 SVDDSNRLEKASKRQERRPVLVNEDYLFKVDLSHMELSPTYWEGPTYQVRRGVWFDSSNQ 117
Query: 102 LDWLPIREDVAEQLEIAYR 120
P+ D+ ++E Y+
Sbjct: 118 ----PLSSDLTSEIEGLYK 132
>sp|O94830|DDHD2_HUMAN Phospholipase DDHD2 OS=Homo sapiens GN=DDHD2 PE=1 SV=2
Length = 711
Score = 37.0 bits (84), Expect = 0.048, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 62 VPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLD--WLPIREDVAEQLEIAY 119
VP GG Y+V L R + VYW+ V R WF KG D ++P E ++ LE Y
Sbjct: 82 VPTDGGRYDVHLGERMRYAVYWDELASEVRRCTWF-YKGDKDNKYVPYSESFSQVLEETY 140
>sp|Q80Y98|DDHD2_MOUSE Phospholipase DDHD2 OS=Mus musculus GN=Ddhd2 PE=1 SV=3
Length = 699
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 58 ERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLD--WLPIREDVAEQL 115
ER+ VP GG Y+V L R + VYW+ V R WF KG D ++P E ++ L
Sbjct: 79 ERI-VPTDGGRYDVHLGERMRYAVYWDELPSEVRRCTWFY-KGDKDNKYVPYSESFSQVL 136
Query: 116 EIAY 119
E Y
Sbjct: 137 EDTY 140
>sp|Q32NQ7|DAAF3_XENLA Dynein assembly factor 3, axonemal OS=Xenopus laevis GN=dnaaf3 PE=2
SV=1
Length = 485
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 79 FPV--YWNGDNRRVLRGHWFARKGGLDW 104
FP+ YW+G NRR L + +RKG DW
Sbjct: 178 FPIDKYWDGKNRRHLGTRYDSRKGAYDW 205
>sp|Q9WU42|NCOR2_MOUSE Nuclear receptor corepressor 2 OS=Mus musculus GN=Ncor2 PE=1 SV=3
Length = 2472
Score = 30.0 bits (66), Expect = 5.9, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 3 EHLLQREEELLSNWWKEYAECSEGPRERASSIK-KSDVQASLTESVRSAELYEVEEERVG 61
+ QR ++L+ W K+ PR RA K + + E + EL E + RVG
Sbjct: 296 QRFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVG 355
>sp|P30685|1B35_HUMAN HLA class I histocompatibility antigen, B-35 alpha chain OS=Homo
sapiens GN=HLA-B PE=1 SV=1
Length = 362
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 15/105 (14%)
Query: 25 EGPR--ERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVY 82
EGP +R + I K++ Q + ES+R+ Y + E G + +Y DL
Sbjct: 79 EGPEYWDRNTQIFKTNTQ-TYRESLRNLRGYYNQSE-AGSHIIQRMYGCDL--------- 127
Query: 83 WNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRR 127
G + R+LRGH + G D++ + ED++ +Q+ R+
Sbjct: 128 --GPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRK 170
>sp|P32427|PCAB_PSEPU 3-carboxy-cis,cis-muconate cycloisomerase (Fragment) OS=Pseudomonas
putida GN=pcaB PE=1 SV=3
Length = 422
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 101 GLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQ-LELTWSSCTFYWR 149
G +P+ E +AEQL+++ Q WH + L++F L L S + R
Sbjct: 203 GSKAMPVAEALAEQLKLSLPEQPWHTQRDRLVEFASVLGLVAGSLGKFGR 252
>sp|P59624|SP2AB_PASPE Anti-sigma F factor OS=Pasteuria penetrans GN=spoIIAB PE=3 SV=1
Length = 150
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 10 EELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEER 59
E + + Y ECSEG R S ++ D Q ++T + R + +VE+ R
Sbjct: 47 EAVTNAVIHAYGECSEGMMVRVS-VEIEDTQVAITVTDRGVGIVDVEQAR 95
>sp|O08542|EFNA4_MOUSE Ephrin-A4 OS=Mus musculus GN=Efna4 PE=2 SV=2
Length = 206
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 80 PVYWNGDNRRVLRGHWFARKGGLDWLPI 107
P+YWN N R+LRG G D+L I
Sbjct: 29 PIYWNSSNPRLLRGDAVVELGFNDYLDI 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,042,782
Number of Sequences: 539616
Number of extensions: 2247691
Number of successful extensions: 6039
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6025
Number of HSP's gapped (non-prelim): 27
length of query: 150
length of database: 191,569,459
effective HSP length: 107
effective length of query: 43
effective length of database: 133,830,547
effective search space: 5754713521
effective search space used: 5754713521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)