Query         031955
Match_columns 150
No_of_seqs    155 out of 790
Neff          6.5 
Searched_HMMs 29240
Date          Mon Mar 25 12:07:49 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031955.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031955hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2kmw_A Uncharacterized protein 100.0 1.3E-44 4.5E-49  272.9  14.8  146    1-150     1-147 (150)
  2 1ejf_A Progesterone receptor P 100.0 5.2E-35 1.8E-39  213.8  11.5  109    4-114     2-113 (125)
  3 2cg9_X CO-chaperone protein SB 100.0 2.3E-35 7.9E-40  218.3   6.6  114    1-116     3-132 (134)
  4 2xcm_C SGT1-like protein, cyto  99.9 2.7E-24 9.3E-29  147.6  10.0   88    4-92      2-91  (92)
  5 1rl1_A Suppressor of G2 allele  99.9 1.1E-23 3.7E-28  150.4  10.7   94    1-95      4-101 (114)
  6 1x5m_A Calcyclin-binding prote  99.9 9.3E-23 3.2E-27  148.9  11.2   90    4-94     20-116 (127)
  7 2o30_A Nuclear movement protei  99.9 1.4E-22 4.9E-27  148.7  11.1   90    1-95      1-93  (131)
  8 1wgv_A KIAA1068 protein; CS do  99.9 2.3E-22 7.7E-27  146.3  11.9   92    3-95     18-114 (124)
  9 1wh0_A Ubiquitin carboxyl-term  99.9 5.9E-22   2E-26  146.6  11.0   89    4-93     19-122 (134)
 10 1wfi_A Nuclear distribution ge  99.8 1.2E-20 4.2E-25  138.2  11.7   98    3-105     6-110 (131)
 11 2rh0_A NUDC domain-containing   99.8 1.3E-19 4.5E-24  137.0  11.0   89    3-96     12-107 (157)
 12 3qor_A Nuclear migration prote  99.8 1.9E-19 6.6E-24  130.5  10.9   89    3-95     15-110 (121)
 13 3eud_A Protein SHQ1; CS domain  98.4 5.3E-06 1.8E-10   59.3  11.9   81    3-89     16-104 (115)
 14 2k8q_A Protein SHQ1; beta-sand  98.4 6.9E-07 2.3E-11   65.7   7.4   82    3-90      2-91  (134)
 15 3gla_A Low molecular weight he  98.4 1.1E-05 3.9E-10   55.2  12.2   81    2-83      2-99  (100)
 16 4fei_A Heat shock protein-rela  98.2 3.4E-05 1.2E-09   53.3  12.5   80    3-83      5-96  (102)
 17 3aab_A Putative uncharacterize  98.1 7.7E-05 2.6E-09   53.1  11.7   79    4-83     24-117 (123)
 18 1gme_A Heat shock protein 16.9  97.9  0.0002 6.9E-09   52.9  11.3   80    4-83     43-139 (151)
 19 4eld_A MJ16.5-P1, small heat s  97.8 0.00045 1.5E-08   51.3  12.0   76    7-83     59-152 (161)
 20 2wj5_A Heat shock protein beta  97.4 0.00074 2.5E-08   46.5   8.1   77    6-83      3-90  (101)
 21 3l1e_A Alpha-crystallin A chai  97.4  0.0038 1.3E-07   43.3  11.1   78    5-83      3-91  (106)
 22 3q9p_A Heat shock protein beta  97.2   0.005 1.7E-07   40.9  10.3   70   11-81      4-84  (85)
 23 2y1y_A Alpha-crystallin B chai  97.1  0.0028 9.6E-08   42.5   7.7   72   11-83      3-85  (90)
 24 2klr_A Alpha-crystallin B chai  96.7  0.0073 2.5E-07   45.7   8.0   76    7-83     66-152 (175)
 25 2bol_A TSP36, small heat shock  96.6   0.012   4E-07   48.5   9.5   80    4-84     98-191 (314)
 26 2bol_A TSP36, small heat shock  91.0     1.2 4.3E-05   36.3   8.8   68   13-81    232-313 (314)
 27 3shs_A HOC head outer capsid p  30.4      61  0.0021   26.3   4.5   73    5-78    224-302 (304)
 28 2q7a_A Cell surface heme-bindi  20.8 2.4E+02  0.0083   20.5   5.8   72    8-80     48-135 (152)

No 1  
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=100.00  E-value=1.3e-44  Score=272.88  Aligned_cols=146  Identities=71%  Similarity=1.213  Sum_probs=127.5

Q ss_pred             CCCCCCeEEEecCCEEEEEEEcCCCCCceEEEe-cccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEE
Q 031955            1 MSRHPEVLWAQRSDKVYLTISLPDAKDISVKCE-PQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQ   79 (150)
Q Consensus         1 Ms~~P~v~WaQ~~~~V~ltV~l~d~kd~~V~~~-~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~   79 (150)
                      |++||+|.||||.+.|+|||+++++++++|+|+ ++ +|+|++.+.+++.|.++|+||++|+|+ |+|++.+++|+|+|+
T Consensus         1 m~~~P~~~W~Qt~~~V~ltI~l~~~~~v~V~~~~~~-~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~   78 (150)
T 2kmw_A            1 SSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQG-LFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQ   78 (150)
T ss_dssp             CEECCCEEEEECSSEEEEEECCSSEEEEEECCCTTE-EEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEE
T ss_pred             CCcCCcEEEEeCCCEEEEEEEeCCCCceEEEEecCC-EEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEEEE
Confidence            899999999999999999999999999999999 56 889999865678999999999999999 999999999999999


Q ss_pred             ecCCCcccceecccccCCCcceecCCccccCcccCCCCCCCCCCCcccccCCCCCCCCCccCcCCCCccCC
Q 031955           80 KEEKGWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSNSDLASNDDDAEHVGQNDESSDDEGMLYLPDLEKL  150 (150)
Q Consensus        80 K~~~~~W~rL~k~~~K~~~~lk~Dwdkw~deddee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (150)
                      |+++++||||++++.|+++|+++||+||+||++++++... ++ +..++++.++.++||++|+|+|||+++
T Consensus        79 K~e~~~W~rL~k~~~K~~~~lk~Dwdkw~dedeeee~~~~-~~-~~~~~~~~d~~~~~d~~~~~~p~l~~~  147 (150)
T 2kmw_A           79 KEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSETA-SD-DESAFVNQDSESSDDDGLLYLPDLEKA  147 (150)
T ss_dssp             ECCSSCCSCSBSCCSSCCTTEEECSSSSCCSSCCCCSSCC-CC-CCCCCCCCCCCCCCCCCCCCCCCSCCC
T ss_pred             ECCCCcCcccccCCcccCccccccchhcCCchhccccccc-Cc-ccccccccccccccccCCccCCCHHHh
Confidence            9998999999999888445999999999999776654442 22 233555566777788999999999985


No 2  
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=100.00  E-value=5.2e-35  Score=213.75  Aligned_cols=109  Identities=32%  Similarity=0.590  Sum_probs=98.7

Q ss_pred             CC-CeEEEecCCEEEEEEEcCCCCCceEEEecccEEEEEEec-CCCceEEEEEeccccccCCCceEEecCCeEEEEEEec
Q 031955            4 HP-EVLWAQRSDKVYLTISLPDAKDISVKCEPQGIFGFSAVG-VQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKE   81 (150)
Q Consensus         4 ~P-~v~WaQ~~~~V~ltV~l~d~kd~~V~~~~~~~l~f~~~~-~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~   81 (150)
                      || +|.||||.+.|+|||+++++++++|+|+++ +|+|++.+ .+|++|.++++||++|+|++|+|++.+++|+|+|+|+
T Consensus         2 ~P~~~~W~Qt~~~V~ltI~~~~~~~~~V~~~~~-~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~   80 (125)
T 1ejf_A            2 QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKS-KLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKG   80 (125)
T ss_dssp             BCCCEEEEECSSEEEEEECCTTEEEEEEEEETT-EEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEES
T ss_pred             CCCceeEEeCCCEEEEEEEecCCCceEEEEECC-EEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEEC
Confidence            56 999999999999999999999999999999 88999875 4678899999999999999999999999999999999


Q ss_pred             CCC-cccceecccccCCCcceecCCccccCcccC
Q 031955           82 EKG-WWKRLLKSEEKPAPYIKVDWNKWCDEDDEG  114 (150)
Q Consensus        82 ~~~-~W~rL~k~~~K~~~~lk~Dwdkw~deddee  114 (150)
                      +++ +|+||++++.|++ |+++||+||+||+|++
T Consensus        81 ~~~~~W~rL~~~~~K~~-~lk~D~dkw~de~dd~  113 (125)
T 1ejf_A           81 ESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDS  113 (125)
T ss_dssp             STTCCCSSSBSSCCCCT-TEEECTTTCCCCC---
T ss_pred             CCCCCCCceecCCCccc-cccCChHHhCCccccc
Confidence            875 9999999988864 9999999999974443


No 3  
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=100.00  E-value=2.3e-35  Score=218.34  Aligned_cols=114  Identities=29%  Similarity=0.550  Sum_probs=94.7

Q ss_pred             CCCCCCeEEEecCCE-------EEEEEEcCCCCCceEEEecccEEEEEEecCC------CceEEEEEeccccccCCCceE
Q 031955            1 MSRHPEVLWAQRSDK-------VYLTISLPDAKDISVKCEPQGIFGFSAVGVQ------GELFDFSLELFGKTLPEKCKT   67 (150)
Q Consensus         1 Ms~~P~v~WaQ~~~~-------V~ltV~l~d~kd~~V~~~~~~~l~f~~~~~~------~~~y~~~leLf~~I~pe~S~~   67 (150)
                      |+++|+|.||||.+.       |+|||+++++++++|+|+++ +|+|++.+..      ++.|.++|+||++|+|++|+|
T Consensus         3 ~~~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~~~~V~~~~~-~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~   81 (134)
T 2cg9_X            3 KVINPQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKPS-YIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMH   81 (134)
T ss_dssp             --------CBCCCEEECCCSSEEEEECCCSSEESCCCCBCSS-EEEECCEEC-------CEEBCEEEECSSCCCSSSEEE
T ss_pred             cccCCCEEEEeCCCCcCCcCCEEEEEEEecCCCceEEEEECC-EEEEEEecccccCCccCceEEEEEEChhhccccccEE
Confidence            578999999999987       99999999999999999999 8899987532      378999999999999999999


Q ss_pred             EecCCe-EEEEEEecCC--CcccceecccccCCCcceecCCccccCcccCCC
Q 031955           68 KVGLRN-IICSVQKEEK--GWWKRLLKSEEKPAPYIKVDWNKWCDEDDEGSN  116 (150)
Q Consensus        68 ~i~~~k-I~i~L~K~~~--~~W~rL~k~~~K~~~~lk~Dwdkw~deddee~~  116 (150)
                      ++.+++ |+|+|+|+++  .+||||++++.|++ |+++||+||+||||++++
T Consensus        82 ~v~~~~~vei~L~K~~~~~~~W~rL~k~~~K~~-~lk~D~dkw~dEde~e~~  132 (134)
T 2cg9_X           82 KVANGQHYFLKLYKKDLESEYWPRLTKEKVKYP-YIKTDFDKWVDADEQDEV  132 (134)
T ss_dssp             EECCC--CEEEEEECSSSSCCCSCSSSSCCCCS-SEEECTTTCCCSSSSSCC
T ss_pred             EECCCEEEEEEEEECCCCCCCCCceecCCCccC-cccCCchhcCCccccccc
Confidence            999999 9999999983  59999999988865 999999999999776553


No 4  
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.91  E-value=2.7e-24  Score=147.62  Aligned_cols=88  Identities=20%  Similarity=0.314  Sum_probs=81.3

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEEEEec
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICSVQKE   81 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L~K~   81 (150)
                      .|+|.|+||.+.|+|+|+++++  +++.|+|+++ +|+|++.+.+++.|.++++||++|+|++|+|++.+++|+|+|+|+
T Consensus         2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~-~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~   80 (92)
T 2xcm_C            2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQ-ILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKA   80 (92)
T ss_dssp             CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSS-BEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBS
T ss_pred             CccccEEeCCCEEEEEEEECCCChHHeEEEEECC-EEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcC
Confidence            5899999999999999999995  6899999998 789998765567899999999999999999999999999999999


Q ss_pred             CCCcccceecc
Q 031955           82 EKGWWKRLLKS   92 (150)
Q Consensus        82 ~~~~W~rL~k~   92 (150)
                      ++++|+||+++
T Consensus        81 ~~~~W~~L~~~   91 (92)
T 2xcm_C           81 DIITWASLEHG   91 (92)
T ss_dssp             SSCCCSCSBTT
T ss_pred             CCCcchhcccC
Confidence            98999999975


No 5  
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.90  E-value=1.1e-23  Score=150.44  Aligned_cols=94  Identities=22%  Similarity=0.347  Sum_probs=81.2

Q ss_pred             CCCC--CCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEE
Q 031955            1 MSRH--PEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIIC   76 (150)
Q Consensus         1 Ms~~--P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i   76 (150)
                      |+++  |+|.|+||.+.|+|+|+++++  +++.|+|+++ +|+|++...+++.|.++++||++|+|++|+|++.+++|+|
T Consensus         4 m~~~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~-~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i   82 (114)
T 1rl1_A            4 MTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEK-ELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEI   82 (114)
T ss_dssp             ----CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSS-CEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEE
T ss_pred             CCCCCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcC-EEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEE
Confidence            7766  569999999999999999987  4899999998 7899987545788999999999999999999999999999


Q ss_pred             EEEecCCCcccceeccccc
Q 031955           77 SVQKEEKGWWKRLLKSEEK   95 (150)
Q Consensus        77 ~L~K~~~~~W~rL~k~~~K   95 (150)
                      +|+|+++++|+||++++.+
T Consensus        83 ~L~K~~~~~W~~L~~~~~~  101 (114)
T 1rl1_A           83 KLKKPEAVRWEKLEGQGDV  101 (114)
T ss_dssp             EEECSSCCCCSSSBTTC--
T ss_pred             EEEcCCCCcCccccccCCc
Confidence            9999998999999998766


No 6  
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89  E-value=9.3e-23  Score=148.93  Aligned_cols=90  Identities=18%  Similarity=0.318  Sum_probs=82.2

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC-----CCceEEEecccEEEEEEecCCCceEEEEEe-ccccccCCCceEEecCCeEEEE
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA-----KDISVKCEPQGIFGFSAVGVQGELFDFSLE-LFGKTLPEKCKTKVGLRNIICS   77 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~-----kd~~V~~~~~~~l~f~~~~~~~~~y~~~le-Lf~~I~pe~S~~~i~~~kI~i~   77 (150)
                      .++|.|+||.+.|+|+|+++++     +++.|+|+++ +|.|++.+..+++|.++++ ||++|+|++|+|++.+++|+|+
T Consensus        20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~-~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~   98 (127)
T 1x5m_A           20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTER-SFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLIL   98 (127)
T ss_dssp             CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSS-EEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEE
T ss_pred             ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcC-EEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEE
Confidence            3699999999999999999987     6899999999 8899987656789999996 9999999999999999999999


Q ss_pred             EEecCCC-cccceecccc
Q 031955           78 VQKEEKG-WWKRLLKSEE   94 (150)
Q Consensus        78 L~K~~~~-~W~rL~k~~~   94 (150)
                      |+|++++ +|+||++.+.
T Consensus        99 L~K~~~~~~W~~L~~~~~  116 (127)
T 1x5m_A           99 CRKKVENTRWDYLTQVEK  116 (127)
T ss_dssp             EECSSSSCCCSSSBHHHH
T ss_pred             EEECCCCCCCCccccccc
Confidence            9999987 9999997654


No 7  
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.88  E-value=1.4e-22  Score=148.75  Aligned_cols=90  Identities=18%  Similarity=0.310  Sum_probs=75.4

Q ss_pred             CCCCCCeEEEecCCEEEEEEEcC---CCCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCeEEEE
Q 031955            1 MSRHPEVLWAQRSDKVYLTISLP---DAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRNIICS   77 (150)
Q Consensus         1 Ms~~P~v~WaQ~~~~V~ltV~l~---d~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~kI~i~   77 (150)
                      |+.+|+|.|+||.+.|+|+|.|+   .++++.|+|+++ +|.|++.   |.+ .++++||++|+|++|+|++.+++|+|+
T Consensus         1 m~~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~-~l~v~~~---g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~   75 (131)
T 2o30_A            1 MPSEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGK-KICVKNQ---GEI-VIDGELLHEVDVSSLWWVINGDVVDVN   75 (131)
T ss_dssp             ----CCCEEEEETTEEEEEEECC---CCSCEEEEEETT-EEEEEET---TEE-EEEEEBSSCEEEEEEEEEEETTEEEEE
T ss_pred             CCCCCcEEEEecCCEEEEEEECCCCCCccceEEEEECC-EEEEEEC---CEe-eEccccccccccccCEEEEeCCEEEEE
Confidence            89999999999999999999997   468999999999 8898874   456 799999999999999999999999999


Q ss_pred             EEecCCCcccceeccccc
Q 031955           78 VQKEEKGWWKRLLKSEEK   95 (150)
Q Consensus        78 L~K~~~~~W~rL~k~~~K   95 (150)
                      |+|+...||+||++++.+
T Consensus        76 L~K~~~~~W~~L~~~~~~   93 (131)
T 2o30_A           76 VTKKRNEWWDSLLVGSES   93 (131)
T ss_dssp             EEESSCCCCSCSBC----
T ss_pred             EEECCCCCCccccCCCCC
Confidence            999966699999997654


No 8  
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.88  E-value=2.3e-22  Score=146.32  Aligned_cols=92  Identities=18%  Similarity=0.318  Sum_probs=82.8

Q ss_pred             CCCCeEEEecCCEEEEEEEcC----CCCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCe-EEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLP----DAKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRN-IICS   77 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~----d~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~k-I~i~   77 (150)
                      .+|+|.|+||.+.|+|+|.|+    .+++++|+|+++ +|.|++.+..+.+|.++++||++|+|++|+|++.+++ |+|+
T Consensus        18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~-~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~   96 (124)
T 1wgv_A           18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSS-SIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVN   96 (124)
T ss_dssp             CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSS-EEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEE
T ss_pred             cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcC-EEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEE
Confidence            579999999999999999999    457999999999 8899987545667889999999999999999999876 9999


Q ss_pred             EEecCCCcccceeccccc
Q 031955           78 VQKEEKGWWKRLLKSEEK   95 (150)
Q Consensus        78 L~K~~~~~W~rL~k~~~K   95 (150)
                      |+|++..||+||++++.+
T Consensus        97 L~K~~~~~W~~L~~~~~~  114 (124)
T 1wgv_A           97 LSKVGEYWWNAILEGEEP  114 (124)
T ss_dssp             ECBSSSCCCSCSBTTSCC
T ss_pred             EEECCCCCCcCcccCCCc
Confidence            999988899999987755


No 9  
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.87  E-value=5.9e-22  Score=146.55  Aligned_cols=89  Identities=17%  Similarity=0.206  Sum_probs=80.6

Q ss_pred             CCCeEEEec-CCEEEEEEEcCCC--CCceEEEecccEEEEEEecCCCc------------eEEEEEeccccccCCCceEE
Q 031955            4 HPEVLWAQR-SDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQGE------------LFDFSLELFGKTLPEKCKTK   68 (150)
Q Consensus         4 ~P~v~WaQ~-~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~~~------------~y~~~leLf~~I~pe~S~~~   68 (150)
                      .|+|.|||| .+.|+|+|+++++  ++++|+|+++ +|+|++...++.            .|.++++||++|+|++|+|+
T Consensus        19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~-~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~   97 (134)
T 1wh0_A           19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQ-DFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFC   97 (134)
T ss_dssp             CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSS-EEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred             CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECC-EEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEE
Confidence            589999999 9999999999987  7899999999 889998753333            79999999999999999999


Q ss_pred             ecCCeEEEEEEecCCCcccceeccc
Q 031955           69 VGLRNIICSVQKEEKGWWKRLLKSE   93 (150)
Q Consensus        69 i~~~kI~i~L~K~~~~~W~rL~k~~   93 (150)
                      +.+++|+|+|+|++..+|+||++..
T Consensus        98 v~~~kIeI~L~K~e~~~W~~L~~~~  122 (134)
T 1wh0_A           98 FTASRIDICLRKRQSQRWGGLEAPA  122 (134)
T ss_dssp             ECSSEEEEEEEESSSCCCSCSBCCC
T ss_pred             EeCCEEEEEEEECCCCccccccccC
Confidence            9999999999999888999999743


No 10 
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.84  E-value=1.2e-20  Score=138.20  Aligned_cols=98  Identities=19%  Similarity=0.298  Sum_probs=84.6

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC-----CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCC-eEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD-----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLR-NIIC   76 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d-----~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~-kI~i   76 (150)
                      .+|+|.|+||.+.|+|+|.+++     +++++|+|+++ +|.|++.   |..+.++++||++|+|++|+|++.++ .|+|
T Consensus         6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~-~l~v~~k---g~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i   81 (131)
T 1wfi_A            6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRR-HLRVGLK---GQPPVVDGELYNEVKVEESSWLIEDGKVVTV   81 (131)
T ss_dssp             SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETT-EEEEEET---TSCCSBCSCBSSCBCSTTCEEEEETTTEEEE
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCC-EEEEEEC---CceEEEecccccccccccCEEEEcCCCEEEE
Confidence            5799999999999999999995     37999999999 8888874   55567999999999999999999986 6999


Q ss_pred             EEEecCCC-cccceecccccCCCcceecCC
Q 031955           77 SVQKEEKG-WWKRLLKSEEKPAPYIKVDWN  105 (150)
Q Consensus        77 ~L~K~~~~-~W~rL~k~~~K~~~~lk~Dwd  105 (150)
                      +|+|++++ ||+||++++.+.. ..+++..
T Consensus        82 ~L~K~~~~~~W~~L~~~~~~id-~~ki~pe  110 (131)
T 1wfi_A           82 HLEKINKMEWWNRLVTSDPEIN-TKKINPE  110 (131)
T ss_dssp             EEEBSSSCCCCSCSBSSCCSCC-CSSSSCC
T ss_pred             EEEECCCCCCChhhhcCCCCCC-ccEecCC
Confidence            99999885 9999999877643 5666653


No 11 
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.81  E-value=1.3e-19  Score=136.99  Aligned_cols=89  Identities=21%  Similarity=0.372  Sum_probs=79.1

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC---CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecCCe-EEEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD---AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGLRN-IICSV   78 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d---~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~~k-I~i~L   78 (150)
                      .+|+|.|+||.+.|+|+|.|+.   ++++.|+|+++ +|+|+++   |.. .++++||++|+|++|+|++.+++ |+|+|
T Consensus        12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~-~L~v~~k---g~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~L   86 (157)
T 2rh0_A           12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSR-HVALAVG---GRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVL   86 (157)
T ss_dssp             ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSS-EEEEEET---TEE-EEEEEBSSCBCGGGCEEEEECCCEEEEEE
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecC-EEEEEEC---CEE-EEeeccccccCccccEEEEcCCcEEEEEE
Confidence            4699999999999999999985   58999999999 8899875   445 49999999999999999999877 99999


Q ss_pred             EecCC---CcccceecccccC
Q 031955           79 QKEEK---GWWKRLLKSEEKP   96 (150)
Q Consensus        79 ~K~~~---~~W~rL~k~~~K~   96 (150)
                      +|++.   .||+||++++.+.
T Consensus        87 ~K~~~~~~~~W~~L~k~~~~l  107 (157)
T 2rh0_A           87 TKTKRDAANCWTSLLESEYAA  107 (157)
T ss_dssp             EBSSCSTTCCCSEEETTEEEC
T ss_pred             EEcCCCcCCcChhhhcCCCCC
Confidence            99986   5999999987664


No 12 
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.81  E-value=1.9e-19  Score=130.53  Aligned_cols=89  Identities=20%  Similarity=0.337  Sum_probs=78.7

Q ss_pred             CCCCeEEEecCCEEEEEEEcCC-----CCCceEEEecccEEEEEEecCCCceEEEEEeccccccCCCceEEecC-CeEEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPD-----AKDISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPEKCKTKVGL-RNIIC   76 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d-----~kd~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe~S~~~i~~-~kI~i   76 (150)
                      .+|+|.|+||.+.|+|+|.++.     ++++.|+|+++ +|.|.++   |.+|.++++||++|+|++|+|++.+ +.|+|
T Consensus        15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~-~l~v~~k---g~~~~~~g~L~~~I~~deS~w~i~~~~~i~i   90 (121)
T 3qor_A           15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRR-HLRVGLK---GQPAIIDGELYNEVKVEESSWLIADGAVVTV   90 (121)
T ss_dssp             BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETT-EEEEEET---TSCCSEEEEBSSCBCGGGCEEEEETTTEEEE
T ss_pred             cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcC-EEEEEEc---CcceEEeccccccccccccEEEEcCCCEEEE
Confidence            4689999999999999999984     47899999999 8888774   4567899999999999999999997 58999


Q ss_pred             EEEecCCC-cccceeccccc
Q 031955           77 SVQKEEKG-WWKRLLKSEEK   95 (150)
Q Consensus        77 ~L~K~~~~-~W~rL~k~~~K   95 (150)
                      +|.|++.+ ||+||++++.+
T Consensus        91 ~L~K~~~~~~W~~L~~~~~~  110 (121)
T 3qor_A           91 HLEKINKMEWWSRLVSSDPE  110 (121)
T ss_dssp             EEEBSSSSCCCSCSBTTSCC
T ss_pred             EEEECCCCCCChhhhcCCCC
Confidence            99999875 99999997754


No 13 
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.42  E-value=5.3e-06  Score=59.33  Aligned_cols=81  Identities=14%  Similarity=0.249  Sum_probs=68.5

Q ss_pred             CCCCeEEEecCCEEEEEEEcCCCC----CceEEEecccEEEEEEecCCCceEEEEEeccccccCC-C--ceEEecCCeEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPDAK----DISVKCEPQGIFGFSAVGVQGELFDFSLELFGKTLPE-K--CKTKVGLRNII   75 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d~k----d~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I~pe-~--S~~~i~~~kI~   75 (150)
                      ++|++.=.|.++.|+|+|.++.++    ++.+.+..+ .|.|.+     ++|.|.|.|-++|.-+ .  ++|......+.
T Consensus        16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~-~F~F~~-----~PYyLRL~lP~~vved~~~~A~YD~d~g~~~   89 (115)
T 3eud_A           16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHL-----SPYYLRLRFPHELIDDERSTAQYDSKDECIN   89 (115)
T ss_dssp             BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETT-EEEEEE-----TTEEEEEECSSCEECSTTCEEEEETTTTEEE
T ss_pred             eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCC-EEEEec-----CCeEEEEecCcceecCCCcceEEeCCCcEEE
Confidence            589999999999999999999754    788999888 888887     4699999999999553 3  36777789999


Q ss_pred             EEEEecCCC-cccce
Q 031955           76 CSVQKEEKG-WWKRL   89 (150)
Q Consensus        76 i~L~K~~~~-~W~rL   89 (150)
                      |+|.|+.+| ..+-|
T Consensus        90 v~lpK~~~GE~F~dL  104 (115)
T 3eud_A           90 VKVAKLNKNEYFEDL  104 (115)
T ss_dssp             EEEEESSTTCCCCCT
T ss_pred             EEEcCCcCCCcCCCc
Confidence            999999987 66655


No 14 
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.42  E-value=6.9e-07  Score=65.67  Aligned_cols=82  Identities=15%  Similarity=0.204  Sum_probs=68.8

Q ss_pred             CCCCeEEEecCCEEEEEEEcCCCC----CceEEEecccEEEEEEecCCCceEEEEEeccccc-cCCCc--eEEecCCeEE
Q 031955            3 RHPEVLWAQRSDKVYLTISLPDAK----DISVKCEPQGIFGFSAVGVQGELFDFSLELFGKT-LPEKC--KTKVGLRNII   75 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d~k----d~~V~~~~~~~l~f~~~~~~~~~y~~~leLf~~I-~pe~S--~~~i~~~kI~   75 (150)
                      ++|++.=.|+.+.|+|.|.++.++    ++.+.+..+ .|.|.+     .+|.|.|.|-++| .++.+  +|......+.
T Consensus         2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~-~F~F~~-----~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~   75 (134)
T 2k8q_A            2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHL-----SPYYLRLRFPHELIDDERSTAQYDSKDECIN   75 (134)
T ss_dssp             CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSS-SEEECS-----SSSCEEECCSSCEECCSSCEEEEETTTTEEE
T ss_pred             cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCC-EEEEec-----CCeEEEecCCCeeecCCCcceeEeccCCEEE
Confidence            589999999999999999999876    888888887 667765     5799999999999 66655  4555678999


Q ss_pred             EEEEecCCC-ccccee
Q 031955           76 CSVQKEEKG-WWKRLL   90 (150)
Q Consensus        76 i~L~K~~~~-~W~rL~   90 (150)
                      |+|.|+.+| +++-|-
T Consensus        76 VtLpK~~~Ge~F~dLD   91 (134)
T 2k8q_A           76 VKVAKLNKNEYFEDLD   91 (134)
T ss_dssp             EEEEESSTTCCCSSTT
T ss_pred             EEEeCCCCCCCCCCcc
Confidence            999999988 888764


No 15 
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.36  E-value=1.1e-05  Score=55.21  Aligned_cols=81  Identities=14%  Similarity=0.105  Sum_probs=66.8

Q ss_pred             CCCCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----C----------ceEEEEEeccccccCCC
Q 031955            2 SRHPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----G----------ELFDFSLELFGKTLPEK   64 (150)
Q Consensus         2 s~~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~----------~~y~~~leLf~~I~pe~   64 (150)
                      +..|.+.++++.+.+.|++.||++  +++.|.++.+ .|++++....     +          ..|.-.+.|-..|+++.
T Consensus         2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~   80 (100)
T 3gla_A            2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG   80 (100)
T ss_dssp             CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETT-EEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred             CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECC-EEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence            357999999999999999999987  5788999877 8899876311     1          14777888999999999


Q ss_pred             ceEEecCCeEEEEEEecCC
Q 031955           65 CKTKVGLRNIICSVQKEEK   83 (150)
Q Consensus        65 S~~~i~~~kI~i~L~K~~~   83 (150)
                      .+.++.++.+.|+|.|...
T Consensus        81 i~A~~~~GvL~I~~pK~~~   99 (100)
T 3gla_A           81 ITAAGRNGVLEIRIPKRPA   99 (100)
T ss_dssp             CEEEEETTEEEEEEEBC--
T ss_pred             eEEEEeCCEEEEEEecCCC
Confidence            9999999999999999754


No 16 
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.24  E-value=3.4e-05  Score=53.27  Aligned_cols=80  Identities=11%  Similarity=0.119  Sum_probs=67.8

Q ss_pred             CCCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-------C---ceEEEEEeccccccCCCceEEec
Q 031955            3 RHPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-------G---ELFDFSLELFGKTLPEKCKTKVG   70 (150)
Q Consensus         3 ~~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-------~---~~y~~~leLf~~I~pe~S~~~i~   70 (150)
                      ..|.+.++++.+.+.|++.||++  +++.|.++.+ .|++++....       .   ..|.-.+.|-..|+++..+.++.
T Consensus         5 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~   83 (102)
T 4fei_A            5 WTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGG-QLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLA   83 (102)
T ss_dssp             CCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETT-EEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEE
T ss_pred             ccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECC-EEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEE
Confidence            57999999999999999999987  5788998877 8888876311       1   15777888999999999999999


Q ss_pred             CCeEEEEEEecCC
Q 031955           71 LRNIICSVQKEEK   83 (150)
Q Consensus        71 ~~kI~i~L~K~~~   83 (150)
                      ++-+.|+|.|..+
T Consensus        84 ~GvL~I~lpK~~~   96 (102)
T 4fei_A           84 GGVLTVRFEKLRP   96 (102)
T ss_dssp             TTEEEEEEEBSSC
T ss_pred             CCEEEEEEEccCc
Confidence            9999999999865


No 17 
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.07  E-value=7.7e-05  Score=53.08  Aligned_cols=79  Identities=10%  Similarity=-0.004  Sum_probs=66.6

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC--CCceEEEec-ccEEEEEEecCC---Cc--------eEEEEEeccccccCCCc-eEE
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA--KDISVKCEP-QGIFGFSAVGVQ---GE--------LFDFSLELFGKTLPEKC-KTK   68 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~-~~~l~f~~~~~~---~~--------~y~~~leLf~~I~pe~S-~~~   68 (150)
                      .|.+.++++.+.+.|++.||++  +++.|.++. + .|++++....   ++        .|.-.+.|-..|+++.. +.+
T Consensus        24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~-~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~  102 (123)
T 3aab_A           24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQN-ELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGK  102 (123)
T ss_dssp             CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTT-EEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEE
T ss_pred             CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCC-EEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeE
Confidence            4899999999999999999997  578899988 6 8899987321   11        57777889999999998 888


Q ss_pred             ecCCeEEEEEEecCC
Q 031955           69 VGLRNIICSVQKEEK   83 (150)
Q Consensus        69 i~~~kI~i~L~K~~~   83 (150)
                      ..++-+.|+|.|...
T Consensus       103 ~~~GvL~I~lPK~~~  117 (123)
T 3aab_A          103 YENGVLTIRIPIAGT  117 (123)
T ss_dssp             EETTEEEEEEEGGGE
T ss_pred             EcCCEEEEEEEcCCC
Confidence            999999999999764


No 18 
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.88  E-value=0.0002  Score=52.86  Aligned_cols=80  Identities=16%  Similarity=0.262  Sum_probs=65.1

Q ss_pred             CCCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----C----------ceEEEEEeccccccCCCce
Q 031955            4 HPEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----G----------ELFDFSLELFGKTLPEKCK   66 (150)
Q Consensus         4 ~P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~----------~~y~~~leLf~~I~pe~S~   66 (150)
                      .|.+.++++.+.+.|++.||++  ++++|.++..+.|++++....     +          ..|.-.+.|-..|+++..+
T Consensus        43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~  122 (151)
T 1gme_A           43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK  122 (151)
T ss_dssp             GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred             CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceE
Confidence            5899999999999999999997  467787754338899886311     1          2467788899999999888


Q ss_pred             EEecCCeEEEEEEecCC
Q 031955           67 TKVGLRNIICSVQKEEK   83 (150)
Q Consensus        67 ~~i~~~kI~i~L~K~~~   83 (150)
                      .++.++.+.|+|.|...
T Consensus       123 A~~~nGvL~I~lPK~~~  139 (151)
T 1gme_A          123 AGLENGVLTVTVPKAEV  139 (151)
T ss_dssp             EEEETTEEEEEEECCCC
T ss_pred             EEEECCEEEEEEEccCc
Confidence            88999999999999764


No 19 
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.80  E-value=0.00045  Score=51.29  Aligned_cols=76  Identities=14%  Similarity=0.129  Sum_probs=64.2

Q ss_pred             eEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----C-----------ceEEEEEeccccccCCCceEE
Q 031955            7 VLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----G-----------ELFDFSLELFGKTLPEKCKTK   68 (150)
Q Consensus         7 v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~-----------~~y~~~leLf~~I~pe~S~~~   68 (150)
                      +.++++.+.+.|++.|+++  ++++|.++.+ .|++++....     +           ..|.-.+.|-..|+++..+.+
T Consensus        59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~  137 (161)
T 4eld_A           59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAK  137 (161)
T ss_dssp             EEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEE
T ss_pred             eeEEEeCCEEEEEEECCCCChHhEEEEEECC-EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEE
Confidence            9999999999999999997  5788888877 8899886421     1           256677889999999998888


Q ss_pred             ecCCeEEEEEEecCC
Q 031955           69 VGLRNIICSVQKEEK   83 (150)
Q Consensus        69 i~~~kI~i~L~K~~~   83 (150)
                      +.++.++|+|.|...
T Consensus       138 ~~nGvL~I~lpK~~~  152 (161)
T 4eld_A          138 FENGVLSVILPKAES  152 (161)
T ss_dssp             EETTEEEEEEEBCGG
T ss_pred             EECCEEEEEEEcCCC
Confidence            999999999999764


No 20 
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.43  E-value=0.00074  Score=46.51  Aligned_cols=77  Identities=12%  Similarity=0.035  Sum_probs=63.2

Q ss_pred             CeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC-----C---ceEEEEEeccccccCCCceEEe-cCCeE
Q 031955            6 EVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ-----G---ELFDFSLELFGKTLPEKCKTKV-GLRNI   74 (150)
Q Consensus         6 ~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~-----~---~~y~~~leLf~~I~pe~S~~~i-~~~kI   74 (150)
                      .+.++++.+.+.|++.||++  ++++|.+..+ .|++++....     +   ++|.-.+.|-..|+++..+.++ .++.+
T Consensus         3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL   81 (101)
T 2wj5_A            3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGD-HVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVL   81 (101)
T ss_dssp             CCCCCCCSSCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEE
T ss_pred             cEEEEEeCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEE
Confidence            46788999999999999997  5788888876 8899886311     1   3477788899999999999999 68999


Q ss_pred             EEEEEecCC
Q 031955           75 ICSVQKEEK   83 (150)
Q Consensus        75 ~i~L~K~~~   83 (150)
                      .|+|.|...
T Consensus        82 ~I~lPK~~~   90 (101)
T 2wj5_A           82 SIQATPASA   90 (101)
T ss_dssp             EEEECBCCC
T ss_pred             EEEEECCCc
Confidence            999998754


No 21 
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.36  E-value=0.0038  Score=43.29  Aligned_cols=78  Identities=12%  Similarity=0.033  Sum_probs=64.4

Q ss_pred             CCeEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC---CC-----ceEEEEEeccccccCCCceEEe-cCCe
Q 031955            5 PEVLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV---QG-----ELFDFSLELFGKTLPEKCKTKV-GLRN   73 (150)
Q Consensus         5 P~v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~---~~-----~~y~~~leLf~~I~pe~S~~~i-~~~k   73 (150)
                      .-...+++.+.+.|++.||+.  ++++|.+..+ .|++++...   ..     ++|.-.+.|-..|+++.-+.++ .++.
T Consensus         3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~Gv   81 (106)
T 3l1e_A            3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQED-FVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGM   81 (106)
T ss_dssp             CSEEEEECSSEEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSE
T ss_pred             CceEEEEcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCE
Confidence            346789999999999999997  5788888877 889988521   11     3577778899999999999999 6899


Q ss_pred             EEEEEEecCC
Q 031955           74 IICSVQKEEK   83 (150)
Q Consensus        74 I~i~L~K~~~   83 (150)
                      +.|+|.|..+
T Consensus        82 L~I~~PK~~~   91 (106)
T 3l1e_A           82 LTFSGPKIPS   91 (106)
T ss_dssp             EEEEEEBCCC
T ss_pred             EEEEEEccCc
Confidence            9999999865


No 22 
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.25  E-value=0.005  Score=40.93  Aligned_cols=70  Identities=9%  Similarity=0.164  Sum_probs=58.2

Q ss_pred             ecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC-----C---CceEEEEEeccccccCCCceEEec-CCeEEEEEE
Q 031955           11 QRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV-----Q---GELFDFSLELFGKTLPEKCKTKVG-LRNIICSVQ   79 (150)
Q Consensus        11 Q~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~-----~---~~~y~~~leLf~~I~pe~S~~~i~-~~kI~i~L~   79 (150)
                      ++.+.+.|++.||+.  ++++|.+..+ .|++++...     .   ...|.-.+.|-..|+++.-+.++. ++.+.|+|.
T Consensus         4 E~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP   82 (85)
T 3q9p_A            4 HTADRWRVSLDVNHFAPDELTVKTKDG-VVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP   82 (85)
T ss_dssp             CCCCEEEEEEECTTTCCSEEEEEEETT-EEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred             CcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence            678899999999986  5788888877 889988631     1   146888889999999999999998 899999999


Q ss_pred             ec
Q 031955           80 KE   81 (150)
Q Consensus        80 K~   81 (150)
                      |.
T Consensus        83 K~   84 (85)
T 3q9p_A           83 MP   84 (85)
T ss_dssp             CC
T ss_pred             cC
Confidence            85


No 23 
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.08  E-value=0.0028  Score=42.53  Aligned_cols=72  Identities=7%  Similarity=0.099  Sum_probs=54.9

Q ss_pred             ecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecC---CC-----ceEEEEEeccccccCCCceEEe-cCCeEEEEEE
Q 031955           11 QRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGV---QG-----ELFDFSLELFGKTLPEKCKTKV-GLRNIICSVQ   79 (150)
Q Consensus        11 Q~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~---~~-----~~y~~~leLf~~I~pe~S~~~i-~~~kI~i~L~   79 (150)
                      ++.+.+.|++.||++  +++.|.+..+ .|++++...   .+     ++|.-.+.|-..|+++..+.++ .++.+.|+|.
T Consensus         3 ~~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~p   81 (90)
T 2y1y_A            3 MEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGP   81 (90)
T ss_dssp             ---CCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred             cCCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence            467789999999997  5788888876 888888631   11     3577788899999999989999 7899999999


Q ss_pred             ecCC
Q 031955           80 KEEK   83 (150)
Q Consensus        80 K~~~   83 (150)
                      |...
T Consensus        82 K~~~   85 (90)
T 2y1y_A           82 RKQV   85 (90)
T ss_dssp             BC--
T ss_pred             cCCC
Confidence            8753


No 24 
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=96.67  E-value=0.0073  Score=45.67  Aligned_cols=76  Identities=7%  Similarity=0.072  Sum_probs=58.9

Q ss_pred             eEEEecCCEEEEEEEcCCC--CCceEEEecccEEEEEEecCC---C-----ceEEEEEeccccccCCCceEEe-cCCeEE
Q 031955            7 VLWAQRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ---G-----ELFDFSLELFGKTLPEKCKTKV-GLRNII   75 (150)
Q Consensus         7 v~WaQ~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~---~-----~~y~~~leLf~~I~pe~S~~~i-~~~kI~   75 (150)
                      +.++++.+.+.|++.|++.  ++++|++..+ .|++++....   +     ++|.-.+.|-..|+++..+.++ .++.+.
T Consensus        66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~  144 (175)
T 2klr_A           66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLT  144 (175)
T ss_dssp             ---CCCCSEEEEEECCSSCCGGGEEEEEETT-EEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEE
T ss_pred             eEEEEcCCeEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEE
Confidence            5778889999999999997  5788888876 8888886311   1     3477778899999999999999 689999


Q ss_pred             EEEEecCC
Q 031955           76 CSVQKEEK   83 (150)
Q Consensus        76 i~L~K~~~   83 (150)
                      |+|.|+..
T Consensus       145 I~lPK~~~  152 (175)
T 2klr_A          145 VNGPRKQV  152 (175)
T ss_dssp             EEEECC--
T ss_pred             EEEECCCC
Confidence            99999754


No 25 
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.63  E-value=0.012  Score=48.49  Aligned_cols=80  Identities=9%  Similarity=0.003  Sum_probs=67.1

Q ss_pred             CCCeEEEecCC----EEEEEEEcCCC--CCceEEEecccEEEEEEecCC----C---ceEEEEEeccccccCCCceEEec
Q 031955            4 HPEVLWAQRSD----KVYLTISLPDA--KDISVKCEPQGIFGFSAVGVQ----G---ELFDFSLELFGKTLPEKCKTKVG   70 (150)
Q Consensus         4 ~P~v~WaQ~~~----~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~~~----~---~~y~~~leLf~~I~pe~S~~~i~   70 (150)
                      .|.+..+.+.+    .+.|++.||+.  ++++|+++.+ .|++++....    +   ..|.-.+.|-..|+++..+.++.
T Consensus        98 ~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~-~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~  176 (314)
T 2bol_A           98 DFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKN-KLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATIT  176 (314)
T ss_dssp             GGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETT-EEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEEC
T ss_pred             CCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECC-EEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEe
Confidence            37788899999    99999999986  6888998877 8899886311    1   36888899999999999999999


Q ss_pred             -CCeEEEEEEecCCC
Q 031955           71 -LRNIICSVQKEEKG   84 (150)
Q Consensus        71 -~~kI~i~L~K~~~~   84 (150)
                       ++.+.|+|.|..+.
T Consensus       177 ~nGVL~I~lPK~~~~  191 (314)
T 2bol_A          177 TDDVLVIEAPVNEPN  191 (314)
T ss_dssp             SSSEEEEEEEBSSCC
T ss_pred             CCCEEEEEEeccCcc
Confidence             89999999998754


No 26 
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=90.98  E-value=1.2  Score=36.30  Aligned_cols=68  Identities=15%  Similarity=0.065  Sum_probs=53.4

Q ss_pred             CCEEEEEEEc-CCC--CCceEEEecccEEEEEEecCC---C--------ceEEEEEeccccccCCCceEEecCCeEEEEE
Q 031955           13 SDKVYLTISL-PDA--KDISVKCEPQGIFGFSAVGVQ---G--------ELFDFSLELFGKTLPEKCKTKVGLRNIICSV   78 (150)
Q Consensus        13 ~~~V~ltV~l-~d~--kd~~V~~~~~~~l~f~~~~~~---~--------~~y~~~leLf~~I~pe~S~~~i~~~kI~i~L   78 (150)
                      .+.+.|.+.| |+.  +++.|+++.+ .|++++....   +        ..|.=.+.|-..|+++.-+.++.++.+.|+|
T Consensus       232 ~~~~~v~~~ldPG~~~edi~V~v~~~-~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~  310 (314)
T 2bol_A          232 SKKIHLELKVDPHFAPKDVKVWAKGN-KVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA  310 (314)
T ss_dssp             CEEEEEEEECCTTCCGGGEEEEESSS-EEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcCCCCChHHeEEEEECC-EEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence            3478899999 886  5788888777 8899887311   0        1366677899999999988888999999999


Q ss_pred             Eec
Q 031955           79 QKE   81 (150)
Q Consensus        79 ~K~   81 (150)
                      .|.
T Consensus       311 Pk~  313 (314)
T 2bol_A          311 PLF  313 (314)
T ss_dssp             EEE
T ss_pred             ecC
Confidence            874


No 27 
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=30.40  E-value=61  Score=26.33  Aligned_cols=73  Identities=16%  Similarity=0.139  Sum_probs=45.7

Q ss_pred             CCeEEE-ecCCEEEEEEEcCCC--CCceEEEecccEEEEEEec--CCCceEEEEEeccccccCCCceEEe-cCCeEEEEE
Q 031955            5 PEVLWA-QRSDKVYLTISLPDA--KDISVKCEPQGIFGFSAVG--VQGELFDFSLELFGKTLPEKCKTKV-GLRNIICSV   78 (150)
Q Consensus         5 P~v~Wa-Q~~~~V~ltV~l~d~--kd~~V~~~~~~~l~f~~~~--~~~~~y~~~leLf~~I~pe~S~~~i-~~~kI~i~L   78 (150)
                      -+|.|| ||...+.-++--..+  .-.-..++++|| .|+-..  .+...|.+-..||..|..+.-.+.. ..|+-...+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (304)
T 3shs_A          224 IKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH-LFKESATYDDTAKFWCVAKLYQQIEDETVEVAASTSRKCSMEV  302 (304)
T ss_dssp             EEEEEEEECTTCCSCEEEESSSEECGGGEEECTTSC-EEESSCCGGGCEEEEEEEEEEEECSSCEEEEEEEECCCEEEEE
T ss_pred             EEEEEEEeecCccCchhhhhhhhhhhccceeCCCcc-eeecccccccchheeeHHHHHHhhhhheeeeeeccccceeeEe
Confidence            467887 787776666544444  234588899988 454321  1345788999999999887433332 346544433


No 28 
>2q7a_A Cell surface heme-binding protein; beta sandwich; HET: HEM; 2.10A {Streptococcus pyogenes}
Probab=20.81  E-value=2.4e+02  Score=20.46  Aligned_cols=72  Identities=15%  Similarity=0.186  Sum_probs=41.0

Q ss_pred             EEEec-CCEEEEEEEcCCC---CCceEEEeccc-----EEEEEE--ec--CCC--ceEEEEEeccccccCCCceEE-ecC
Q 031955            8 LWAQR-SDKVYLTISLPDA---KDISVKCEPQG-----IFGFSA--VG--VQG--ELFDFSLELFGKTLPEKCKTK-VGL   71 (150)
Q Consensus         8 ~WaQ~-~~~V~ltV~l~d~---kd~~V~~~~~~-----~l~f~~--~~--~~~--~~y~~~leLf~~I~pe~S~~~-i~~   71 (150)
                      .=-++ ..+.||||.+.-.   +++++.+.+.+     .+.+++  .+  .++  ..|.|++.--..++-- |.|. -.+
T Consensus        48 lLE~~d~Gk~YLTvr~~L~d~i~d~~f~Vq~~g~~~f~~v~~t~t~~g~d~ng~T~D~rfeIps~n~~ir~-s~YV~PMG  126 (152)
T 2q7a_A           48 MLEVSDAGKIVLTFRMSLADYSGNYQFWIQPGGTGSFQAVDYNITQKGTDTNGTTLDIAISLPTVNSIIRG-SMFVEPMG  126 (152)
T ss_dssp             EEEEETTSCEEEEEEESCGGGEEEEEEEEEETTCSCCEEECCEEEEEEEETTEEEEEEEEEESCSSEEEEE-EEEEGGGT
T ss_pred             eEEEcCCCcEEEEEEEEhhhhcCccEEEEecCCCCcceeeeEEEeeecccCCCCeEEEEEEeCCCCcEEEE-EEEEccCC
Confidence            34466 4788999988864   78888887654     332232  22  122  3577776533322221 3333 347


Q ss_pred             CeEEEEEEe
Q 031955           72 RNIICSVQK   80 (150)
Q Consensus        72 ~kI~i~L~K   80 (150)
                      |.|.+-++=
T Consensus       127 R~V~F~~~~  135 (152)
T 2q7a_A          127 REVVFYLSA  135 (152)
T ss_dssp             EEEEEEEEE
T ss_pred             CcEEEEEee
Confidence            999888863


Done!