BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031957
(150 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118486114|gb|ABK94900.1| unknown [Populus trichocarpa]
Length = 225
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 97/148 (65%), Gaps = 14/148 (9%)
Query: 1 MAAASSCATLALCSSLTSHCKIS-CQNPNPHPQLSLSKSKLCSFP-------SPKLYT-R 51
MAA+SS A +ALCSSLT+ CKIS QNP L LSK SF SP +++ R
Sbjct: 1 MAASSSTALMALCSSLTTQCKISKSQNPPLSKTLCLSKPNFGSFSNTTKKLSSPLIFSKR 60
Query: 52 PTFSFTHKFSQTEPPPVSEPEVEPEAAL-EAEAEPT-TEVVESAAKEEPKREEIFAVVMI 109
PTF K S++E P V E E E + EA EP T++VE A +E KREEIFAVVM+
Sbjct: 61 PTFFARPKVSESEAPVV---EAETEVPVSEANPEPAATQIVEVAKEEPTKREEIFAVVMV 117
Query: 110 GSRQYIVFPGRFIYTQRLKGANVNDKVC 137
GSRQYIV PGR++Y QRLKGANVNDK+
Sbjct: 118 GSRQYIVIPGRWLYVQRLKGANVNDKIV 145
>gi|224135915|ref|XP_002327335.1| predicted protein [Populus trichocarpa]
gi|222835705|gb|EEE74140.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 95/150 (63%), Gaps = 18/150 (12%)
Query: 1 MAAASSCATLALCSSLTSHCKIS-CQNPNPHPQLSLSKSKLCSFP---------SPKLYT 50
MA +SS +ALCSSLT+ CKIS QNP L LSK SF S
Sbjct: 1 MATSSSTTLVALCSSLTTQCKISNAQNPPLSKSLCLSKPNSGSFSKTTQNLSSSSLIFSK 60
Query: 51 RPTFSFTH--KFSQTEPPPVSEPEVEPEAAL-EAEAEPT-TEVVESAAKEEPKREEIFAV 106
RPTF F + KFS++E V E EPE + EA EP T++VE A +E PKREEIFAV
Sbjct: 61 RPTF-FANPPKFSESEALVV---EAEPEVPVSEANPEPAATQMVEVAKEEPPKREEIFAV 116
Query: 107 VMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
VM+GSRQYIV PGR++Y QRLKGANVNDKV
Sbjct: 117 VMVGSRQYIVIPGRWLYVQRLKGANVNDKV 146
>gi|255571748|ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus communis]
gi|223533821|gb|EEF35552.1| 50S ribosomal protein L21, putative [Ricinus communis]
Length = 214
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 88/141 (62%), Gaps = 15/141 (10%)
Query: 4 ASSCATLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCSFP-------SPKLYTRPTFSF 56
A++C TL+LCSS T+ C IS NP+ +SK+ S P S KL TRP+F
Sbjct: 2 ATTCTTLSLCSSFTAQCTISNHKQNPN---FISKTHFSSNPKIGPFTKSHKLTTRPSFLP 58
Query: 57 THKFSQTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYIV 116
K S+++ P + EVE A E + EP V AKEE KREEIFAVVM+G RQYIV
Sbjct: 59 ILKSSESDAPVL---EVEDANAPELQPEPAPFV--EVAKEETKREEIFAVVMVGGRQYIV 113
Query: 117 FPGRFIYTQRLKGANVNDKVC 137
PGRFIY QRLKGANVNDKV
Sbjct: 114 IPGRFIYVQRLKGANVNDKVA 134
>gi|224145182|ref|XP_002325555.1| predicted protein [Populus trichocarpa]
gi|222862430|gb|EEE99936.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 88/146 (60%), Gaps = 29/146 (19%)
Query: 1 MAAASSCATLALCSSLTSHCKIS-CQNPNPHPQLSLSKSKLCSFP-------SPKLYT-R 51
MAA+SS A +ALCSSLT+ CKIS QNP L LSK SF SP +++ R
Sbjct: 1 MAASSSTALMALCSSLTTQCKISKSQNPPLSKTLCLSKPNFGSFSNTTKKLSSPLIFSKR 60
Query: 52 PTFSFTHKFSQTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGS 111
PTF + P+ PE A T++VE A +E KREEIFAVVM+GS
Sbjct: 61 PTF-------------FARPKANPEPA-------ATQIVEVAKEEPTKREEIFAVVMVGS 100
Query: 112 RQYIVFPGRFIYTQRLKGANVNDKVC 137
RQYIV PGR++Y QRLKGANVNDK+
Sbjct: 101 RQYIVIPGRWLYVQRLKGANVNDKIV 126
>gi|15219695|ref|NP_174808.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
gi|1710424|sp|P51412.1|RK21_ARATH RecName: Full=50S ribosomal protein L21, chloroplastic; AltName:
Full=CL21; Flags: Precursor
gi|8778379|gb|AAF79387.1|AC007887_46 F15O4.7 [Arabidopsis thaliana]
gi|16226899|gb|AAL16293.1|AF428363_1 At1g35680/F15O4_7 [Arabidopsis thaliana]
gi|1149573|emb|CAA89887.1| chloroplast ribosomal large subunit protein L21 [Arabidopsis
thaliana]
gi|14456036|emb|CAB59360.2| chloroplast ribosomal protein L21 [Arabidopsis thaliana]
gi|16648685|gb|AAL25535.1| At1g35680/F15O4_7 [Arabidopsis thaliana]
gi|21436001|gb|AAM51578.1| At1g35680/F15O4_7 [Arabidopsis thaliana]
gi|332193702|gb|AEE31823.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
Length = 220
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 88/142 (61%), Gaps = 17/142 (11%)
Query: 4 ASSCATLALCSSLTSHCKISCQNPNP------HPQLSLSKSKLCSFPSPKL--YTRPTFS 55
ASS ATL+LCS+ ++HC ++ + + P L+L+K L F SP +R F+
Sbjct: 2 ASSSATLSLCSTFSAHCNVNSRRSSTILCSLSKPSLNLAK-PLTGFLSPSTASTSRTAFT 60
Query: 56 FTHKFSQTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYI 115
KF++ S E EPE + EA ++V E +E+ KREEIFAV+M+G RQYI
Sbjct: 61 VAPKFAE------SVVEAEPETT-DIEAVVVSDVSE-VTEEKAKREEIFAVIMVGGRQYI 112
Query: 116 VFPGRFIYTQRLKGANVNDKVC 137
VFPGR++YTQRLK ANV+D++
Sbjct: 113 VFPGRYLYTQRLKDANVDDQIV 134
>gi|297846634|ref|XP_002891198.1| 50S ribosomal protein L21, chloroplast [Arabidopsis lyrata subsp.
lyrata]
gi|297337040|gb|EFH67457.1| 50S ribosomal protein L21, chloroplast [Arabidopsis lyrata subsp.
lyrata]
Length = 215
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 17/142 (11%)
Query: 4 ASSCATLALCSSLTSHCKISCQNPNP------HPQLSLSK--SKLCSFPSPKLYTRPTFS 55
ASS ATL+LCS+ ++HC ++ + + P L+L+K S S PS +R F+
Sbjct: 2 ASSSATLSLCSTFSAHCNVTSRRSSTILCSLSKPSLNLAKPVSGFLS-PSTASTSRTAFT 60
Query: 56 FTHKFSQTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYI 115
KF++ S E EPE + EA ++V E +E+ KREEIFAVVM+G RQYI
Sbjct: 61 VAPKFAE------SVVEAEPETT-DIEAVVVSDVSE-VTEEKAKREEIFAVVMVGGRQYI 112
Query: 116 VFPGRFIYTQRLKGANVNDKVC 137
VFPGR++YTQRLK ANV+D++
Sbjct: 113 VFPGRYLYTQRLKDANVDDQIV 134
>gi|225454186|ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloroplastic [Vitis
vinifera]
gi|297745266|emb|CBI40346.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 80/139 (57%), Gaps = 18/139 (12%)
Query: 6 SCATLAL-CSSLTSHCKISCQNPNPHPQLSLSKSKLCSFPSPKLYTRPTFSFTHKFSQTE 64
+ ATLA SSLT +S ++ + P+ +LS S F SP T S
Sbjct: 2 ASATLAFFSSSLTPTATLSLKHKSSAPKKTLSFSNF-GFLSPHSLT---------LSSRR 51
Query: 65 PP---PVSEPEVEPEAALEAEAEPTTE---VVESAAKEEPKREEIFAVVMIGSRQYIVFP 118
PP P S E EP +EP +E VVE E PKREEIFAVVMIGSRQYIVFP
Sbjct: 52 PPSPLPKSS-EFEPSVIEVESSEPNSEALQVVEEPPPELPKREEIFAVVMIGSRQYIVFP 110
Query: 119 GRFIYTQRLKGANVNDKVC 137
GR+IYTQRLKGA+VNDK+
Sbjct: 111 GRYIYTQRLKGADVNDKII 129
>gi|307136383|gb|ADN34194.1| 50S ribosomal protein l21 [Cucumis melo subsp. melo]
Length = 135
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 20/141 (14%)
Query: 9 TLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCSFPSPKLYTRP-------TFSFTHKFS 61
TL+LC++ + C++S + P S S FP + FSF S
Sbjct: 5 TLSLCANFSLQCRLSTNHSLPLSTPFPSSSSNHHFPLSTSSSSLKLSSSRSAFSFLLNSS 64
Query: 62 QTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYIVFPGRF 121
+E + + +P+A ++ +E +++ P REEIFAVVMIGSRQYIVFPGR+
Sbjct: 65 DSETAVI---DSDPDA---------SQALEIPSQQTPNREEIFAVVMIGSRQYIVFPGRY 112
Query: 122 IYTQRLKGANVNDKVC-NFCA 141
I+TQRLKGANVNDKV +CA
Sbjct: 113 IHTQRLKGANVNDKVALTYCA 133
>gi|388510350|gb|AFK43241.1| unknown [Medicago truncatula]
Length = 212
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 23/143 (16%)
Query: 1 MAAASSCATLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCS-FPSPKLYTRPTFSFTHK 59
MA+A++ LCSS T+HC I P S+S S FPS L SF
Sbjct: 1 MASATASTLSTLCSSFTTHCSIK-------PHFSISHQPFSSRFPSRNL------SFQST 47
Query: 60 FSQTEP----PPVSEPEVEP-EAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQY 114
FSQ P P +E V P ++ + ++++V+S + E+ +FAVVMIG RQY
Sbjct: 48 FSQRLPLLPAPKSTESSVAPVDSDSQVSESESSQIVQSPSWEK----GLFAVVMIGGRQY 103
Query: 115 IVFPGRFIYTQRLKGANVNDKVC 137
IV PGR++ QRLKGANVNDK+
Sbjct: 104 IVHPGRWLVVQRLKGANVNDKIA 126
>gi|449463382|ref|XP_004149413.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Cucumis
sativus]
gi|449496845|ref|XP_004160241.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Cucumis
sativus]
Length = 206
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 38/40 (95%)
Query: 98 PKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
P REEIFAVVMIGSRQYIVFPGR+I+TQRLKGA+VNDK+
Sbjct: 87 PNREEIFAVVMIGSRQYIVFPGRYIHTQRLKGADVNDKIT 126
>gi|388502066|gb|AFK39099.1| unknown [Lotus japonicus]
Length = 216
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 1 MAAASSCATLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCSFPS--PKLYTRPTFSFTH 58
MA+A++ + LC+S +HC IS + + S+S FPS KL +P +FT
Sbjct: 1 MASATAIVS-TLCASFGTHCTISSTS-----KPLFSQSSTSRFPSHSNKLSLQPP-TFTQ 53
Query: 59 KFSQTEPPPVSEPEV-EPEAALEAEAEPTTEVVESAAKEEPKRE-EIFAVVMIGSRQYIV 116
+F P VSE V EPE + P E E + P E +FAVVM+G RQYIV
Sbjct: 54 RFPLLPLPKVSESAVAEPEIDVTT---PQPEAGEIVPAQPPSWEPGLFAVVMVGGRQYIV 110
Query: 117 FPGRFIYTQRLKGANVNDKVC 137
PGR+I QRLKGA NDK+
Sbjct: 111 HPGRWIVVQRLKGAKANDKIA 131
>gi|132776|sp|P24613.1|RK21_SPIOL RecName: Full=50S ribosomal protein L21, chloroplastic; AltName:
Full=CL21; AltName: Full=CS-L7; Flags: Precursor
gi|21315|emb|CAA40019.1| L21 r-protein [Spinacia oleracea]
gi|170135|gb|AAA34041.1| ribosomal protein L21 [Spinacia oleracea]
gi|310590|gb|AAA74715.1| ribosomal protein L21 [Spinacia oleracea]
Length = 256
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 36/40 (90%)
Query: 98 PKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
P REEIFAVV+IGSRQYIV PGR+IYTQRLKGA VNDK+
Sbjct: 118 PPREEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIV 157
>gi|388514731|gb|AFK45427.1| unknown [Lotus japonicus]
Length = 216
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 18/143 (12%)
Query: 1 MAAASSCATLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCSFPS--PKLYTRPTFSFTH 58
MA+A++ + LC+S +HC IS + + S+S FPS KL +P +FT
Sbjct: 1 MASATAIVS-TLCASFGTHCTISSTS-----KPLFSQSSHSRFPSHSNKLSLQPP-TFTL 53
Query: 59 KFSQTEPPPVSEPEVEPEAALEAEAEPTT---EVVESAAKEEPKRE-EIFAVVMIGSRQY 114
+F P + P+V A E E + TT E E + P E +FAVVM+G RQY
Sbjct: 54 RF-----PLLPFPKVSESAVAELETDVTTPQPEAGEIVPAQPPSWEPGLFAVVMVGGRQY 108
Query: 115 IVFPGRFIYTQRLKGANVNDKVC 137
IV PGR+I QRLKGA NDK+
Sbjct: 109 IVHPGRWIVVQRLKGAKANDKIA 131
>gi|226495409|ref|NP_001151711.1| LOC100285347 [Zea mays]
gi|194701604|gb|ACF84886.1| unknown [Zea mays]
gi|413936468|gb|AFW71019.1| 50S ribosomal protein L21 [Zea mays]
Length = 231
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 42/65 (64%), Gaps = 11/65 (16%)
Query: 84 EPTTEVVESAAKEEPKREE-----------IFAVVMIGSRQYIVFPGRFIYTQRLKGANV 132
EP TE E A EP + IFAVVMIGSRQYIV PGR+IYTQRLKGANV
Sbjct: 81 EPETEAEEKPAVPEPIEAQLAAAGAGKDADIFAVVMIGSRQYIVMPGRYIYTQRLKGANV 140
Query: 133 NDKVC 137
ND++
Sbjct: 141 NDQII 145
>gi|226494843|ref|NP_001147263.1| 50S ribosomal protein L21 [Zea mays]
gi|195609236|gb|ACG26448.1| 50S ribosomal protein L21 [Zea mays]
Length = 122
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 33/35 (94%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
IFAVVMIGSRQYIV PGR+IYTQRLKGANVND+V
Sbjct: 88 IFAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQVW 122
>gi|195649211|gb|ACG44073.1| 50S ribosomal protein L21 [Zea mays]
Length = 207
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 42/65 (64%), Gaps = 11/65 (16%)
Query: 84 EPTTEVVESAAKEEPKREE-----------IFAVVMIGSRQYIVFPGRFIYTQRLKGANV 132
EP TE E A EP + IFAVVMIGSRQYIV PGR+IYTQRLKGANV
Sbjct: 57 EPETEAEEKPAVPEPIEAQLAAAGAGKDADIFAVVMIGSRQYIVMPGRYIYTQRLKGANV 116
Query: 133 NDKVC 137
ND++
Sbjct: 117 NDQII 121
>gi|413925929|gb|AFW65861.1| 50S ribosomal protein L21 [Zea mays]
Length = 142
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
IFAVVMIGSRQYIV PGR+IYTQRLKGANVND+V
Sbjct: 109 IFAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQV 142
>gi|242064696|ref|XP_002453637.1| hypothetical protein SORBIDRAFT_04g009660 [Sorghum bicolor]
gi|241933468|gb|EES06613.1| hypothetical protein SORBIDRAFT_04g009660 [Sorghum bicolor]
Length = 209
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
IFAVVMIGSRQYIV PGR+IYTQRLKGANVND++
Sbjct: 91 IFAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQII 125
>gi|223949103|gb|ACN28635.1| unknown [Zea mays]
Length = 214
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
IFAVVMIGSRQYIV PGR+IYTQRLKGANVND++
Sbjct: 96 IFAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQII 130
>gi|351726375|ref|NP_001238148.1| uncharacterized protein LOC100527321 [Glycine max]
gi|255632081|gb|ACU16393.1| unknown [Glycine max]
Length = 213
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 3 AASSCATLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCSFPSPKLYTRPTFSFTHKFSQ 62
A ++ + LC++ +HC IS +P P S S L FPS T + + +
Sbjct: 2 ATATVSISTLCATFGTHCAISH---DPKPLFSQPFS-LNRFPS----TSYKLTLSPRSPI 53
Query: 63 TEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYIVFPGRFI 122
+ P VSE V +E EP V EP +FAVVMIG RQYIV PGR +
Sbjct: 54 STLPKVSESAVAETETGSSEPEPDQIVPAQPPSWEPG---LFAVVMIGGRQYIVHPGRHL 110
Query: 123 YTQRLKGANVNDKVC 137
QRLKGANVNDK+
Sbjct: 111 TVQRLKGANVNDKIA 125
>gi|413925928|gb|AFW65860.1| hypothetical protein ZEAMMB73_969110 [Zea mays]
Length = 227
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
IFAVVMIGSRQYIV PGR+IYTQRLKGANVND++
Sbjct: 109 IFAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQII 143
>gi|189096142|pdb|3BBO|T Chain T, Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 257
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 98 PKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
P+ E IFAVV+IGSRQYIV PGR+IYTQRLKGA VNDK+
Sbjct: 119 PREEIIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIV 158
>gi|115445399|ref|NP_001046479.1| Os02g0259600 [Oryza sativa Japonica Group]
gi|47497887|dbj|BAD20071.1| putative 50S ribosomal protein L21, chloroplast [Oryza sativa
Japonica Group]
gi|47497911|dbj|BAD20117.1| putative 50S ribosomal protein L21, chloroplast [Oryza sativa
Japonica Group]
gi|113536010|dbj|BAF08393.1| Os02g0259600 [Oryza sativa Japonica Group]
gi|125581545|gb|EAZ22476.1| hypothetical protein OsJ_06142 [Oryza sativa Japonica Group]
gi|215694047|dbj|BAG89246.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737504|dbj|BAG96634.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 214
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
IFAVVMIGSRQYIV PGR+IYTQRLKGANVND++
Sbjct: 96 IFAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQII 130
>gi|125538873|gb|EAY85268.1| hypothetical protein OsI_06639 [Oryza sativa Indica Group]
Length = 214
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
IFAVVMIGSRQYIV PGR+IYTQRLKGANVND++
Sbjct: 96 IFAVVMIGSRQYIVMPGRYIYTQRLKGANVNDQII 130
>gi|358248914|ref|NP_001239706.1| uncharacterized protein LOC100795152 [Glycine max]
gi|255640899|gb|ACU20732.1| unknown [Glycine max]
Length = 213
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 3 AASSCATLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCSFPSPKLYTRPTFSFTHKFSQ 62
A ++ + LC++ +HC IS NP P L L FPS S+ FS
Sbjct: 2 ATATVSISTLCATFGTHCAIS-HNPKP---LFSQPFNLNHFPS--------NSYKLAFSP 49
Query: 63 TEP----PPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYIVFP 118
P P SE V AE EP EP +FAVVMIG RQYIV P
Sbjct: 50 RSPLSPLPKASESAVAETEPGSAEPEPAQISPAQPPSWEPG---LFAVVMIGGRQYIVHP 106
Query: 119 GRFIYTQRLKGANVNDKVC 137
GR + QRLKGANVNDK+
Sbjct: 107 GRHLTVQRLKGANVNDKIA 125
>gi|357139216|ref|XP_003571180.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like
[Brachypodium distachyon]
Length = 284
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 32/35 (91%)
Query: 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
IFAVVMIGSRQYIV PGR+IYTQRLK ANVND++
Sbjct: 167 IFAVVMIGSRQYIVMPGRYIYTQRLKDANVNDQII 201
>gi|302772282|ref|XP_002969559.1| hypothetical protein SELMODRAFT_410329 [Selaginella moellendorffii]
gi|302774821|ref|XP_002970827.1| hypothetical protein SELMODRAFT_411445 [Selaginella moellendorffii]
gi|300161538|gb|EFJ28153.1| hypothetical protein SELMODRAFT_411445 [Selaginella moellendorffii]
gi|300163035|gb|EFJ29647.1| hypothetical protein SELMODRAFT_410329 [Selaginella moellendorffii]
Length = 230
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 100 REEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
R++ FAV IG++Q+ V PG +Y +RLK ANVNDK+
Sbjct: 99 RQDAFAVFQIGAKQFKVTPGDVLYIERLKCANVNDKL 135
>gi|116794414|gb|ABK27135.1| unknown [Picea sitchensis]
Length = 298
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 75 PEAALEAEAEPTTEVVESAAKEEPK---REEIFAVVMIGSRQYIVFPGRFIYTQRLKGAN 131
PE EA+ E V+ SA + K +E IFAVV IGS Q+ V G +IY ++LK A+
Sbjct: 153 PEEVQEAD-EIGYRVIGSAKNSDGKSWRQEPIFAVVQIGSHQFKVSGGDWIYVEKLKYAD 211
Query: 132 VNDKV 136
V K+
Sbjct: 212 VKQKI 216
>gi|255070967|ref|XP_002507565.1| ribosomal L21 protein, chloroplast precursor [Micromonas sp.
RCC299]
gi|226522840|gb|ACO68823.1| ribosomal L21 protein, chloroplast precursor [Micromonas sp.
RCC299]
Length = 189
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 80 EAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
+ + T V+ + A + R++ F VV IGS+QY VF G I +RL NV D+V
Sbjct: 49 RSSSHHTFRVLSTPASDSTMRQDGFGVVRIGSQQYKVFCGDLILVERLAHYNVRDEV 105
>gi|384252046|gb|EIE25523.1| hypothetical protein COCSUDRAFT_40742 [Coccomyxa subellipsoidea
C-169]
Length = 185
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 71 PEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGA 130
PEV AA + + T V + A + E R+ +FAVV +G Q+ V PG + +++++G
Sbjct: 30 PEV---AAKQDWPQQVTRVGKVAGRFEVPRKPVFAVVELGPTQFKVSPGDVVVSEKIRGV 86
Query: 131 NVNDKV 136
+VNDKV
Sbjct: 87 DVNDKV 92
>gi|115465385|ref|NP_001056292.1| Os05g0557800 [Oryza sativa Japonica Group]
gi|49328019|gb|AAT58720.1| putative ribosomal protein L21 [Oryza sativa Japonica Group]
gi|50878314|gb|AAT85089.1| putative 50S ribosomal protein L21 [Oryza sativa Japonica Group]
gi|113579843|dbj|BAF18206.1| Os05g0557800 [Oryza sativa Japonica Group]
gi|125553275|gb|EAY98984.1| hypothetical protein OsI_20941 [Oryza sativa Indica Group]
gi|215687150|dbj|BAG90920.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632523|gb|EEE64655.1| hypothetical protein OsJ_19509 [Oryza sativa Japonica Group]
Length = 250
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 93 AAKEEPKR--EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
A E+P + E +FAVV IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 124 GADEKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 170
>gi|359496166|ref|XP_003635167.1| PREDICTED: uncharacterized protein LOC100852480 [Vitis vinifera]
Length = 245
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
E +FAVV IGS Q+ V G IYT+RLK VND+V
Sbjct: 143 EPVFAVVQIGSHQFKVSNGDCIYTERLKFCEVNDRV 178
>gi|242091337|ref|XP_002441501.1| hypothetical protein SORBIDRAFT_09g028120 [Sorghum bicolor]
gi|241946786|gb|EES19931.1| hypothetical protein SORBIDRAFT_09g028120 [Sorghum bicolor]
Length = 250
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 93 AAKEEPKR--EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
A E+P + E +FAVV IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 124 GADEKPFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLV 170
>gi|224133964|ref|XP_002321703.1| predicted protein [Populus trichocarpa]
gi|222868699|gb|EEF05830.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 100 REEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
RE +FAVV IGS Q+ V G IY +RLK VNDK+
Sbjct: 139 REPVFAVVQIGSHQFKVSNGDCIYVERLKFCEVNDKL 175
>gi|357132610|ref|XP_003567922.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 1
[Brachypodium distachyon]
gi|357132612|ref|XP_003567923.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 2
[Brachypodium distachyon]
Length = 262
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
E +FAVV IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 136 EPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 172
>gi|212723982|ref|NP_001132778.1| uncharacterized protein LOC100194267 [Zea mays]
gi|195635625|gb|ACG37281.1| 50S ribosomal protein L21 [Zea mays]
Length = 250
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
E +FAVV IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 134 EPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLV 170
>gi|226497698|ref|NP_001140704.1| uncharacterized protein LOC100272779 [Zea mays]
gi|194700660|gb|ACF84414.1| unknown [Zea mays]
gi|413948415|gb|AFW81064.1| hypothetical protein ZEAMMB73_427624 [Zea mays]
Length = 251
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 93 AAKEEPKR--EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
A E+P + E +FA+V IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 125 GADEKPFKPYEPVFAIVQIGSHQFKVSNGDSIFTERLKFCDVNDKL 170
>gi|194695374|gb|ACF81771.1| unknown [Zea mays]
gi|413946465|gb|AFW79114.1| 50S ribosomal protein L21 [Zea mays]
Length = 250
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
E +FAVV IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 134 EPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLV 170
>gi|167997399|ref|XP_001751406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697387|gb|EDQ83723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 444
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 99 KREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
K+ + FAVV +GS Q+ V P IYT++LK ++NDK+
Sbjct: 261 KKPKAFAVVQVGSHQFKVSPNDLIYTEKLKYCDINDKL 298
>gi|297791957|ref|XP_002863863.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309698|gb|EFH40122.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 119
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 107 VMIGSRQYIVFPGRFIYTQRLKGA 130
V +G QYI+FPGR+IYT+RLK A
Sbjct: 81 VQVGGCQYIMFPGRYIYTKRLKDA 104
>gi|241948153|ref|XP_002416799.1| mitochondrial inner membrane protein involved in potassium ion
transport, putative [Candida dubliniensis CD36]
gi|223640137|emb|CAX44384.1| mitochondrial inner membrane protein involved in potassium ion
transport, putative [Candida dubliniensis CD36]
Length = 508
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 9 TLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCSFPSPKLYTRPTFSFTHKFSQTEPPPV 68
TLA+ SSLTS + Q P+ H L+ S +FP K + R H ++ E P +
Sbjct: 26 TLAIKSSLTSSIRYPLQ-PSLHNNLN---SNTINFPLVKSFIR------HNSTKPEKPSL 75
Query: 69 SEPEVEPEAALEAEAEPTTEVVESAAKEEPKR 100
S +++ +A E P TE+V A EEPK+
Sbjct: 76 SSEQIKEKALETLEKSPATELVHKAV-EEPKK 106
>gi|255556067|ref|XP_002519068.1| 50S ribosomal protein L21, mitochondrial precursor, putative
[Ricinus communis]
gi|223541731|gb|EEF43279.1| 50S ribosomal protein L21, mitochondrial precursor, putative
[Ricinus communis]
Length = 268
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
E +FAV+ IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 136 EPVFAVIQIGSHQFKVSNGDCIFTERLKFCDVNDKLI 172
>gi|297841789|ref|XP_002888776.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334617|gb|EFH65035.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 186
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 107 VMIGSRQYIVFPGRFIYTQRLKGA 130
V +G QYI+FPGR+IYT+RLK A
Sbjct: 81 VQVGGCQYIMFPGRYIYTKRLKDA 104
>gi|297735993|emb|CBI23967.3| unnamed protein product [Vitis vinifera]
Length = 89
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDK 135
E +FAVV IGS Q+ V G IYT+RLK VND+
Sbjct: 48 EPVFAVVQIGSHQFKVSNGDCIYTERLKFCEVNDR 82
>gi|307136145|gb|ADN33989.1| 50S ribosomal protein l21 mitochondrial precursor [Cucumis melo
subsp. melo]
Length = 279
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 104 FAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
FAVV IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 152 FAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL 184
>gi|449452985|ref|XP_004144239.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Cucumis
sativus]
Length = 270
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
E FAVV IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 140 EPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL 175
>gi|308799429|ref|XP_003074495.1| putative 50S ribosomal protein L21 (ISS) [Ostreococcus tauri]
gi|116000666|emb|CAL50346.1| putative 50S ribosomal protein L21 (ISS) [Ostreococcus tauri]
Length = 214
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 97 EPKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
E +R+E+F VV I S Q+ V P IY ++K VND V
Sbjct: 101 EARRKEVFGVVQIRSHQFKVSPDDLIYVDKVKDVEVNDVV 140
>gi|297798872|ref|XP_002867320.1| hypothetical protein ARALYDRAFT_328625 [Arabidopsis lyrata subsp.
lyrata]
gi|297313156|gb|EFH43579.1| hypothetical protein ARALYDRAFT_328625 [Arabidopsis lyrata subsp.
lyrata]
Length = 770
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
E +FA+V IGS Q+ V G I+T++LK ++NDK+
Sbjct: 638 EPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKL 673
>gi|296089877|emb|CBI39696.3| unnamed protein product [Vitis vinifera]
Length = 89
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
E +FA V IG+ ++ V G IYT+RLK V+DKVC
Sbjct: 51 ELVFAAVQIGAHRFKVSNGDCIYTERLKLCEVSDKVC 87
>gi|449489339|ref|XP_004158283.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L21,
mitochondrial-like [Cucumis sativus]
Length = 270
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
E FAVV IGS Q+ V G I+T+RLK +VNDK+
Sbjct: 140 EPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL 175
>gi|2980773|emb|CAA18200.1| putative protein [Arabidopsis thaliana]
gi|7269995|emb|CAB79811.1| putative protein [Arabidopsis thaliana]
Length = 782
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
E +FA+V IGS Q+ V G I+T++LK ++NDK+
Sbjct: 650 EPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKL 685
>gi|18417696|ref|NP_567861.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
gi|29839556|sp|Q8L9A0.1|RM21_ARATH RecName: Full=50S ribosomal protein L21, mitochondrial; Flags:
Precursor
gi|12641613|emb|CAC27453.1| putative ribosomal protein L21 [Arabidopsis thaliana]
gi|21595368|gb|AAM66095.1| unknown [Arabidopsis thaliana]
gi|29028852|gb|AAO64805.1| At4g30930 [Arabidopsis thaliana]
gi|110736393|dbj|BAF00165.1| hypothetical protein [Arabidopsis thaliana]
gi|225898835|dbj|BAH30548.1| hypothetical protein [Arabidopsis thaliana]
gi|332660431|gb|AEE85831.1| 50S ribosomal protein L21 [Arabidopsis thaliana]
Length = 270
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
E +FA+V IGS Q+ V G I+T++LK ++NDK+
Sbjct: 138 EPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKL 173
>gi|313585316|gb|ADR70863.1| mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]
Length = 271
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
E +FAVV IGS Q+ V G I+T++LK VNDK+
Sbjct: 139 EPVFAVVQIGSHQFKVSNGDCIFTEKLKFCEVNDKL 174
>gi|357511751|ref|XP_003626164.1| 50S ribosomal protein L21 [Medicago truncatula]
gi|355501179|gb|AES82382.1| 50S ribosomal protein L21 [Medicago truncatula]
Length = 290
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 104 FAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
FAVV IGS Q+ V G I+T+RLK VNDK+
Sbjct: 161 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLI 194
>gi|357511749|ref|XP_003626163.1| 50S ribosomal protein L21 [Medicago truncatula]
gi|355501178|gb|AES82381.1| 50S ribosomal protein L21 [Medicago truncatula]
Length = 300
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 104 FAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
FAVV IGS Q+ V G I+T+RLK VNDK+
Sbjct: 171 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLI 204
>gi|348573039|ref|XP_003472299.1| PREDICTED: LOW QUALITY PROTEIN: multiple PDZ domain protein-like
[Cavia porcellus]
Length = 2031
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 16/81 (19%)
Query: 32 QLSLSKSKLCSFPS-PKLYTRPTFSFTHKFSQT------EPPPVSEPEVEPEAAL----- 79
Q +++ + C PS P LY + +FS T+ F+ + + P SEPE EPE AL
Sbjct: 1238 QSIVNRPRKCPLPSLPHLYPKYSFSSTNPFADSLQFNADKAPSHSEPEPEPEKALLCDVL 1297
Query: 80 ----EAEAEPTTEVVESAAKE 96
A AE +++ +SAA E
Sbjct: 1298 QPSSSAFAEMSSDHAQSAASE 1318
>gi|388506582|gb|AFK41357.1| unknown [Medicago truncatula]
Length = 300
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 104 FAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
FAVV IGS Q+ V G I+T+RLK VNDK+
Sbjct: 171 FAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLI 204
>gi|412993910|emb|CCO14421.1| 50S ribosomal protein L21 [Bathycoccus prasinos]
Length = 231
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
+ +FAVV IGS Q+ V P + ++L GA+VND V
Sbjct: 123 KNVFAVVSIGSHQHKVSPDDLFFVEKLHGAHVNDVV 158
>gi|357450723|ref|XP_003595638.1| 50S ribosomal protein L21 [Medicago truncatula]
gi|355484686|gb|AES65889.1| 50S ribosomal protein L21 [Medicago truncatula]
Length = 407
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 104 FAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
FAVV IGS Q+ V G I+T+RLK VNDK+
Sbjct: 278 FAVVEIGSHQFKVSNGDNIFTERLKFCEVNDKL 310
>gi|294658713|ref|XP_002770831.1| DEHA2F15840p [Debaryomyces hansenii CBS767]
gi|202953331|emb|CAR66354.1| DEHA2F15840p [Debaryomyces hansenii CBS767]
Length = 1742
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 25 QNPNPHPQLSLSKSKLCSFPSPKLYTRPTFSFTHKFSQTEPPPVSEPEV---EPEAALEA 81
+ P+PH ++SLS S+ C+ RPT S T P+S P++ EP+ L+
Sbjct: 41 KKPSPHFKISLSSSE-CA-------DRPTISLILDIEFTSTYPLSPPKIKILEPKNILKT 92
Query: 82 EAEPTTEVVESAAKEEPKREEIFAVV 107
+ + ++ KE P+ E F ++
Sbjct: 93 RLQAIEKRIKDLIKEYPEEEVSFTII 118
>gi|356521364|ref|XP_003529326.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 2
[Glycine max]
Length = 228
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVCN 138
E +FAVV IGS Q+ V I+T+RLK VNDK +
Sbjct: 130 EPVFAVVQIGSHQFKVSNRDSIFTERLKFCEVNDKALD 167
>gi|429088532|ref|ZP_19151264.1| Signal recognition particle receptor protein FtsY (=alpha subunit)
(TC 3.A.5.1.1) [Cronobacter universalis NCTC 9529]
gi|426508335|emb|CCK16376.1| Signal recognition particle receptor protein FtsY (=alpha subunit)
(TC 3.A.5.1.1) [Cronobacter universalis NCTC 9529]
Length = 524
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 64 EPPPVSEPEV-----EPEAALEAEAEPTTEVVESAAKEEPKREEIFA 105
E P+SE E+ +PEAALEAE E +V A +E+P +E FA
Sbjct: 178 EDAPISEEELIALAADPEAALEAEPEDIEDVAPVAEQEKPTKEGFFA 224
>gi|356521362|ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 1
[Glycine max]
Length = 262
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKV 136
E +FAVV IGS Q+ V I+T+RLK VNDK+
Sbjct: 130 EPVFAVVQIGSHQFKVSNRDSIFTERLKFCEVNDKL 165
>gi|68475592|ref|XP_718144.1| hypothetical protein CaO19.3321 [Candida albicans SC5314]
gi|46439900|gb|EAK99212.1| hypothetical protein CaO19.3321 [Candida albicans SC5314]
Length = 508
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 9 TLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCSFPSPKLYTRPTFSFTHKFSQTEPPPV 68
TLA+ SSLTS + Q P+ H L+ + +FP K + R S K +
Sbjct: 26 TLAIKSSLTSSIRYPLQ-PSLHNNLN---ANTINFPLVKSFIRHNSSKPQK-------SL 74
Query: 69 SEPEVEPEAALEA-EAEPTTEVVESAAKEEPKR 100
S PE E ALE E P TE+V A EEPK+
Sbjct: 75 SSPEQIKEKALETLEKSPATELVHKTA-EEPKK 106
>gi|356548719|ref|XP_003542747.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Glycine
max]
Length = 267
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137
E +FAVV IGS Q+ V I+T+RLK VNDK+
Sbjct: 135 EPVFAVVQIGSHQFKVSNRDSIFTERLKFCEVNDKLI 171
>gi|68475055|ref|XP_718413.1| hypothetical protein CaO19.10831 [Candida albicans SC5314]
gi|46440178|gb|EAK99487.1| hypothetical protein CaO19.10831 [Candida albicans SC5314]
Length = 508
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 9 TLALCSSLTSHCKISCQNPNPHPQLSLSKSKLCSFPSPKLYTRPTFSFTHKFSQTEPPPV 68
TLA+ SSLTS + Q P+ H L+ + +FP K + R S K +
Sbjct: 26 TLAIKSSLTSSIRYPLQ-PSLHNNLN---ANTINFPLVKSFIRHNSSKPQK-------SL 74
Query: 69 SEPEVEPEAALEA-EAEPTTEVVESAAKEEPKR 100
S PE E ALE E P TE+V A EEPK+
Sbjct: 75 SSPEQIKEKALETLEKSPATELVHKTA-EEPKK 106
>gi|291530309|emb|CBK95894.1| Cell division septal protein [Eubacterium siraeum 70/3]
Length = 513
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 62 QTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKRE 101
+TEPP +EPE EP + E+E EP +E +S + +P E
Sbjct: 453 ETEPPSEAEPETEPPSEAESETEPPSE-TDSETEPQPDPE 491
>gi|300936475|ref|ZP_07151395.1| signal recognition particle-docking protein FtsY [Escherichia coli
MS 21-1]
gi|432682179|ref|ZP_19917537.1| cell division protein ftsY [Escherichia coli KTE143]
gi|300458397|gb|EFK21890.1| signal recognition particle-docking protein FtsY [Escherichia coli
MS 21-1]
gi|431217726|gb|ELF15292.1| cell division protein ftsY [Escherichia coli KTE143]
Length = 504
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 62 QTEPPPVSEPEV--EPEAALEAEAEPTTEVVESAAKEEPKREEIFA 105
+ +P VSEPEV EPE +E+EA P E V S +E+P EE+ A
Sbjct: 83 KAQPEAVSEPEVIAEPEPVVESEATP--EPVASEREEQPLPEEVKA 126
>gi|384182723|ref|YP_005568485.1| cell surface protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328807|gb|ADY24067.1| cell surface protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 3567
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 52 PTFSFTHKFSQTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEI 103
PT S K S+ +P EPEV+PE E E +P E+PK E+
Sbjct: 3269 PTVSIKPKESEVKPEDPKEPEVKPEDPKEPEVKPEDPKEPEVKPEDPKEPEV 3320
>gi|159044957|ref|YP_001533751.1| cell division protein FtsZ [Dinoroseobacter shibae DFL 12]
gi|157912717|gb|ABV94150.1| cell division protein [Dinoroseobacter shibae DFL 12]
Length = 531
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Query: 52 PTFSFTHKFSQTEPPPVSEPEVEPEAALEAEAEPT------TEVVESAAKEEPKREEIFA 105
P SF + + P PV +PEV AA+EA EP EV + A EEP E++FA
Sbjct: 341 PASSFAAEPADETPEPVYQPEV---AAVEAAPEPQEAPSRLQEVAQRAPAEEPVEEDLFA 397
>gi|346319804|gb|EGX89405.1| transcription initiation factor [Cordyceps militaris CM01]
Length = 1463
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 44 PSPKLYTRPTFSFTHKFSQTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREE 102
PS K+ T+PTFS + Q+ PP+ + + +A P + ++ A + P++EE
Sbjct: 1243 PSIKISTKPTFSSIPR--QSPKPPILLDSIVAHSQAQANGSPASATIQVAKRPRPEKEE 1299
>gi|300711245|ref|YP_003737059.1| hypothetical protein HacjB3_09420 [Halalkalicoccus jeotgali B3]
gi|448296653|ref|ZP_21486707.1| hypothetical protein C497_13256 [Halalkalicoccus jeotgali B3]
gi|299124928|gb|ADJ15267.1| hypothetical protein HacjB3_09420 [Halalkalicoccus jeotgali B3]
gi|445580946|gb|ELY35312.1| hypothetical protein C497_13256 [Halalkalicoccus jeotgali B3]
Length = 508
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 63 TEPPPVSEP-----EVEPEAALEAEAEPTTEVVESAAKEEPKREE 102
+EP PV+EP E EPE L++E+EP T VE+A E + E
Sbjct: 257 SEPSPVAEPTTADAEEEPETELDSESEPDTGAVEAAEGGEGEPTE 301
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.130 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,338,299,197
Number of Sequences: 23463169
Number of extensions: 92174459
Number of successful extensions: 535129
Number of sequences better than 100.0: 716
Number of HSP's better than 100.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 435
Number of HSP's that attempted gapping in prelim test: 522724
Number of HSP's gapped (non-prelim): 10141
length of query: 150
length of database: 8,064,228,071
effective HSP length: 113
effective length of query: 37
effective length of database: 9,707,857,270
effective search space: 359190718990
effective search space used: 359190718990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)