Query 031957
Match_columns 150
No_of_seqs 128 out of 380
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 12:10:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bbo_T Ribosomal protein L21; 100.0 9.7E-31 3.3E-35 219.2 -0.9 132 8-140 4-162 (257)
2 3v2d_V 50S ribosomal protein L 99.4 8.6E-14 2.9E-18 102.4 5.7 37 103-141 1-38 (101)
3 3r8s_R 50S ribosomal protein L 99.4 7E-14 2.4E-18 102.9 4.7 37 103-140 1-38 (103)
4 2zjr_O 50S ribosomal protein L 99.3 8.4E-14 2.9E-18 102.1 -0.7 36 103-140 1-37 (100)
5 2ozj_A Cupin 2, conserved barr 83.1 1.4 4.9E-05 29.2 3.9 22 105-126 69-90 (114)
6 4i4a_A Similar to unknown prot 81.8 1.7 5.7E-05 29.2 3.9 22 105-126 65-86 (128)
7 2ivw_A PILP pilot protein; lip 81.7 1.5 5.2E-05 32.5 3.9 23 100-122 36-58 (113)
8 1v70_A Probable antibiotics sy 80.8 2.1 7.3E-05 26.8 3.9 22 105-126 60-81 (105)
9 3lwc_A Uncharacterized protein 80.1 2 6.7E-05 30.2 4.0 22 105-126 70-91 (119)
10 2y4x_A PILP protein; biosynthe 79.7 1.9 6.6E-05 30.7 3.8 23 101-123 34-56 (93)
11 2lc4_A PILP protein; type IV p 79.3 1.9 6.5E-05 31.9 3.8 23 101-123 41-63 (111)
12 2opk_A Hypothetical protein; p 79.2 1.3 4.3E-05 30.4 2.6 22 105-126 64-87 (112)
13 2arc_A ARAC, arabinose operon 79.2 2.3 7.7E-05 29.1 3.9 22 105-126 49-70 (164)
14 2gu9_A Tetracenomycin polyketi 79.2 2.1 7.2E-05 27.5 3.6 22 105-126 55-76 (113)
15 3fjs_A Uncharacterized protein 78.4 2.1 7.2E-05 29.2 3.6 21 106-126 68-88 (114)
16 3d82_A Cupin 2, conserved barr 77.8 1.7 5.8E-05 27.6 2.8 22 105-126 61-82 (102)
17 3cew_A Uncharacterized cupin p 76.8 2.5 8.5E-05 28.5 3.5 22 105-126 59-80 (125)
18 2pfw_A Cupin 2, conserved barr 76.6 3.2 0.00011 27.3 3.9 22 105-126 65-86 (116)
19 3l2h_A Putative sugar phosphat 75.6 3.1 0.00011 29.5 3.9 22 105-126 79-100 (162)
20 1yhf_A Hypothetical protein SP 74.9 3.7 0.00013 26.9 3.9 22 105-126 71-92 (115)
21 4av2_M PILP protein, type IV p 74.6 2.9 9.8E-05 32.7 3.8 23 100-122 104-126 (181)
22 2pyt_A Ethanolamine utilizatio 74.5 3.4 0.00012 29.7 3.9 22 105-126 86-107 (133)
23 1o5u_A Novel thermotoga mariti 73.7 3.3 0.00011 28.5 3.5 22 105-126 60-82 (101)
24 4h7l_A Uncharacterized protein 73.4 2 6.8E-05 33.1 2.6 21 106-126 80-100 (157)
25 3ibm_A Cupin 2, conserved barr 73.0 3.7 0.00013 30.2 3.9 22 105-126 87-108 (167)
26 1o4t_A Putative oxalate decarb 72.7 3.5 0.00012 28.6 3.5 22 105-126 89-110 (133)
27 3kgz_A Cupin 2 conserved barre 72.3 4 0.00014 30.0 3.9 22 105-126 75-96 (156)
28 4axo_A EUTQ, ethanolamine util 72.2 3.9 0.00013 30.9 3.9 22 105-126 95-116 (151)
29 1y9q_A Transcriptional regulat 72.0 4.1 0.00014 29.6 3.9 22 105-126 137-158 (192)
30 2i45_A Hypothetical protein; n 71.5 3.5 0.00012 27.0 3.2 22 105-126 59-81 (107)
31 3h8u_A Uncharacterized conserv 71.4 3 0.0001 27.9 2.9 22 105-126 71-93 (125)
32 4e2g_A Cupin 2 conserved barre 71.4 4.2 0.00014 27.2 3.6 22 105-126 72-93 (126)
33 2vpv_A Protein MIF2, MIF2P; nu 70.6 4.4 0.00015 31.1 3.9 20 107-126 123-142 (166)
34 2o8q_A Hypothetical protein; c 70.2 4.7 0.00016 27.4 3.7 22 105-126 75-97 (134)
35 2b8m_A Hypothetical protein MJ 69.4 3.1 0.00011 27.6 2.6 22 105-126 58-80 (117)
36 4e2q_A Ureidoglycine aminohydr 69.4 4.4 0.00015 33.3 3.9 22 104-125 217-238 (266)
37 1sef_A Conserved hypothetical 67.9 5.2 0.00018 31.4 3.9 22 105-126 214-235 (274)
38 3ht1_A REMF protein; cupin fol 67.4 4.7 0.00016 27.2 3.2 22 105-126 70-93 (145)
39 3jzv_A Uncharacterized protein 66.9 6 0.0002 29.4 3.9 21 106-126 85-105 (166)
40 2q30_A Uncharacterized protein 66.0 3.5 0.00012 26.5 2.2 22 105-126 66-88 (110)
41 1sfn_A Conserved hypothetical 65.9 6 0.00021 30.6 3.9 21 105-125 197-217 (246)
42 1vj2_A Novel manganese-contain 64.6 4.7 0.00016 27.5 2.8 22 105-126 79-100 (126)
43 1rc6_A Hypothetical protein YL 64.2 4.8 0.00016 31.2 3.0 22 105-126 211-232 (261)
44 3i7d_A Sugar phosphate isomera 64.0 7.6 0.00026 28.2 3.9 23 105-127 76-98 (163)
45 3rns_A Cupin 2 conserved barre 61.0 7.4 0.00025 29.6 3.5 22 105-126 184-205 (227)
46 2bnm_A Epoxidase; oxidoreducta 60.8 9.4 0.00032 27.6 3.9 21 106-126 152-176 (198)
47 2fqp_A Hypothetical protein BP 60.6 8.5 0.00029 25.0 3.3 22 105-126 50-73 (97)
48 3h7j_A Bacilysin biosynthesis 59.9 9.2 0.00031 29.3 3.9 22 105-126 177-198 (243)
49 1lr5_A Auxin binding protein 1 58.7 9.6 0.00033 27.0 3.6 21 106-126 73-102 (163)
50 3bcw_A Uncharacterized protein 58.2 8.5 0.00029 27.4 3.3 22 105-126 79-101 (123)
51 1y3t_A Hypothetical protein YX 57.8 11 0.00036 29.4 4.0 21 106-126 251-271 (337)
52 1rc6_A Hypothetical protein YL 55.1 11 0.00036 29.2 3.5 21 106-126 93-113 (261)
53 2f4p_A Hypothetical protein TM 54.1 9.7 0.00033 27.0 3.0 22 105-126 79-101 (147)
54 3rns_A Cupin 2 conserved barre 52.7 10 0.00035 28.9 3.1 22 105-126 68-89 (227)
55 1sq4_A GLXB, glyoxylate-induce 52.5 14 0.00047 29.5 3.9 22 105-126 223-244 (278)
56 3oss_C Type 2 secretion system 52.3 9.7 0.00033 25.8 2.6 22 102-123 19-40 (68)
57 2oa2_A BH2720 protein; 1017534 50.9 9.3 0.00032 26.8 2.4 22 105-126 75-102 (148)
58 2lnv_A General secretion pathw 50.0 6.4 0.00022 28.7 1.5 24 100-123 37-60 (104)
59 1sq4_A GLXB, glyoxylate-induce 49.7 12 0.0004 29.8 3.1 21 106-126 102-122 (278)
60 1y3t_A Hypothetical protein YX 49.3 17 0.0006 28.1 4.0 22 105-126 78-99 (337)
61 1sfn_A Conserved hypothetical 48.7 11 0.00038 29.1 2.8 22 105-126 79-100 (246)
62 1sef_A Conserved hypothetical 48.3 11 0.00039 29.4 2.8 21 106-126 96-116 (274)
63 2wg5_A General control protein 47.5 9 0.00031 27.3 1.9 33 104-139 51-85 (109)
64 1dgw_A Canavalin; duplicated s 45.1 13 0.00046 27.4 2.6 16 111-126 82-97 (178)
65 2d40_A Z3393, putative gentisa 42.4 24 0.00081 29.2 3.9 21 107-127 301-321 (354)
66 3bu7_A Gentisate 1,2-dioxygena 42.4 23 0.00077 30.5 3.9 22 105-126 325-346 (394)
67 3kz7_A FK506-binding protein 3 40.5 24 0.00083 23.9 3.2 41 99-139 3-44 (119)
68 1x82_A Glucose-6-phosphate iso 38.8 15 0.00053 27.4 2.1 22 105-126 107-133 (190)
69 2cqa_A RUVB-like 2; TIP48, TIP 38.5 9.1 0.00031 27.8 0.7 28 102-129 43-76 (95)
70 2vd8_A Alanine racemase; pyrid 37.8 44 0.0015 27.3 4.8 33 108-140 305-340 (391)
71 1juh_A Quercetin 2,3-dioxygena 37.2 24 0.00081 28.9 3.1 22 105-126 283-305 (350)
72 3h7j_A Bacilysin biosynthesis 35.9 30 0.001 26.4 3.3 21 105-125 65-86 (243)
73 2d40_A Z3393, putative gentisa 33.8 27 0.00093 28.8 3.0 19 108-126 135-153 (354)
74 1zrr_A E-2/E-2' protein; nicke 33.5 22 0.00075 27.3 2.2 19 108-126 116-136 (179)
75 2if4_A ATFKBP42; FKBP-like, al 32.8 5.6 0.00019 31.1 -1.2 47 100-147 49-97 (338)
76 2vqa_A SLL1358 protein, MNCA; 32.7 37 0.0013 26.9 3.5 17 110-126 274-292 (361)
77 4e2q_A Ureidoglycine aminohydr 31.1 26 0.00088 28.7 2.4 21 105-125 101-122 (266)
78 1hf2_A MINC, septum site-deter 31.1 49 0.0017 25.6 3.9 24 110-137 110-133 (210)
79 3h43_A Proteasome-activating n 30.5 20 0.00067 24.7 1.4 32 103-137 31-63 (85)
80 2vqa_A SLL1358 protein, MNCA; 29.9 45 0.0015 26.5 3.5 22 105-126 84-110 (361)
81 1yat_A FK506 binding protein; 29.4 22 0.00075 24.0 1.4 49 100-148 6-55 (113)
82 3bs1_A Accessory gene regulato 29.4 44 0.0015 21.8 3.0 24 104-127 7-30 (103)
83 2k6p_A Uncharacterized protein 29.3 17 0.00059 24.1 0.9 20 107-126 28-51 (92)
84 2ppn_A FK506-binding protein 1 28.7 21 0.00071 23.8 1.2 45 103-147 3-48 (107)
85 3m9b_A Proteasome-associated A 28.5 14 0.00049 30.8 0.4 34 101-137 109-142 (251)
86 3b7x_A FK506-binding protein 6 27.4 92 0.0031 21.9 4.5 48 100-148 26-75 (134)
87 1e0g_A Membrane-bound lytic mu 27.0 16 0.00054 20.8 0.3 13 111-123 2-14 (48)
88 3o5e_A Peptidyl-prolyl CIS-tra 26.8 62 0.0021 23.1 3.6 45 103-148 38-84 (144)
89 1j58_A YVRK protein; cupin, de 26.5 44 0.0015 26.9 3.0 16 111-126 300-315 (385)
90 1juh_A Quercetin 2,3-dioxygena 26.2 44 0.0015 27.3 3.0 20 106-125 83-107 (350)
91 3es1_A Cupin 2, conserved barr 25.5 39 0.0013 25.8 2.4 39 107-146 112-155 (172)
92 2f4e_A ATFKBP42; FKBP-like, al 25.2 31 0.0011 25.9 1.8 47 101-148 50-98 (180)
93 3nw4_A Gentisate 1,2-dioxygena 24.5 68 0.0023 27.5 3.9 23 103-125 302-330 (368)
94 1u79_A FKBP-type peptidyl-prol 23.4 56 0.0019 22.7 2.7 49 99-148 11-60 (129)
95 3myx_A Uncharacterized protein 22.8 83 0.0028 25.3 3.9 36 106-141 77-115 (238)
96 1x4r_A PARP14 protein; WWE dom 22.4 1.1E+02 0.0037 22.1 4.1 24 105-128 59-91 (99)
97 1r9h_A FKB-6, FK506 binding pr 22.4 28 0.00095 24.7 1.0 49 100-148 14-63 (135)
98 3o5q_A Peptidyl-prolyl CIS-tra 22.3 41 0.0014 23.4 1.8 47 102-148 21-68 (128)
99 3d6w_A Methyl-accepting/DNA re 22.2 47 0.0016 22.0 2.1 24 104-127 4-27 (111)
100 1kca_A Repressor protein CI; g 22.1 58 0.002 22.2 2.5 23 115-137 32-54 (109)
101 3nw4_A Gentisate 1,2-dioxygena 22.1 73 0.0025 27.2 3.7 40 106-145 136-180 (368)
102 4g4k_A Accessory gene regulato 21.9 60 0.002 21.4 2.5 24 104-127 7-30 (103)
103 3hz2_A M-crystallin, beta/GAMA 21.4 26 0.00088 23.6 0.6 20 108-127 52-71 (84)
104 1j58_A YVRK protein; cupin, de 21.1 68 0.0023 25.8 3.1 21 106-126 111-136 (385)
105 2qnk_A 3-hydroxyanthranilate 3 21.0 78 0.0027 26.8 3.6 22 104-125 236-257 (286)
106 1vr3_A Acireductone dioxygenas 21.0 53 0.0018 25.7 2.4 20 107-126 117-141 (191)
107 2wkd_A ORF34P2; SSB, single-st 20.7 19 0.00065 27.3 -0.2 35 103-140 44-80 (119)
108 2y78_A Peptidyl-prolyl CIS-tra 20.7 63 0.0022 22.9 2.6 48 100-148 28-76 (133)
No 1
>3bbo_T Ribosomal protein L21; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=99.95 E-value=9.7e-31 Score=219.20 Aligned_cols=132 Identities=40% Similarity=0.504 Sum_probs=35.7
Q ss_pred HHHHH-hhhcccceeecCC-CCCCCCCCccCCCCCCCC-CCC-C-------cccCCCcccccccC-----CCCC------
Q 031957 8 ATLAL-CSSLTSHCKISCQ-NPNPHPQLSLSKSKLCSF-PSP-K-------LYTRPTFSFTHKFS-----QTEP------ 65 (150)
Q Consensus 8 ~~~~l-Css~~~~c~is~~-~p~~~~~~~ls~~~~~~~-~~t-~-------~~~r~~~~~~~~~s-----~se~------ 65 (150)
+||+| ||||++||+|+++ ||+++..+.||+|++|.+ |++ . ..+|++|+..|+++ +|++
T Consensus 4 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~s~p~~~~~~~~~~~~~s~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (257)
T 3bbo_T 4 ATLAFSCSSLCATLKLPQNLNPLLLNVPPLSKPFSGVVSPPSLSRLSLLPVAAKRRRFQEIPEELKAEFEEFQRPPNQKP 83 (257)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEeeeccceeeeeccCCCCCccccccccCCccccccCCCcccccccccccccCcccccchhhhhhchhhhccccccCc
Confidence 35888 9999999999999 898888888999999988 655 3 23499999999999 8887
Q ss_pred CCCCCCCCchhhhhhcccCCchHHHhh---hhccCCCCCc-eEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eee
Q 031957 66 PPVSEPEVEPEAALEAEAEPTTEVVES---AAKEEPKREE-IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFC 140 (150)
Q Consensus 66 ~~v~~~~~~~e~~~epe~~~~~~i~e~---v~~~~~~r~~-MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~ 140 (150)
+++|.+. ..+++|||....+.+|.-+ +..+..++.. |||||++|||||||++||+|+||||+++++||+|+ +.+
T Consensus 84 ~~~~~~p-~~~~~~~~~~~~~~e~~~~~~~~~~~~~k~~~~MYAIIetGGKQYKV~~GD~I~VEKL~~aevGd~V~LdkV 162 (257)
T 3bbo_T 84 QLSDVLP-DDFQAPEPGTPEYNDIINQFLPKKGPPPPREEIIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKV 162 (257)
T ss_dssp -----------------------------------------CCCCCCSSSCCCCCCTTCCCCCCCCTTSCTTCEEECTTC
T ss_pred ceeecCC-CccCCcccccccccccccccccccccCCCcCCCeEEEEEECCEEEEEeCCCEEEEeCCCCCCCCCEEEEEEE
Confidence 4443221 1223333331113333211 2223344544 99999999999999999999999998789999999 555
No 2
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=99.45 E-value=8.6e-14 Score=102.43 Aligned_cols=37 Identities=32% Similarity=0.472 Sum_probs=34.9
Q ss_pred eEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eeec
Q 031957 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFCA 141 (150)
Q Consensus 103 MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~~ 141 (150)
|||||++|||||||++||+|+||+|+ +++||+|+ + ++
T Consensus 1 MyAIi~~gGkQykV~~Gd~i~vekl~-~~~G~~v~~~-VL 38 (101)
T 3v2d_V 1 MFAIVKTGGKQYRVEPGLKLRVEKLD-AEPGATVELP-VL 38 (101)
T ss_dssp CEEEEEETTEEEEECTTCEEEESCCS-CCTTCEEEEC-EE
T ss_pred CEEEEEeCCEEEEEeCCCEEEECCcC-CCCCCEEEEE-EE
Confidence 99999999999999999999999997 89999999 6 53
No 3
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=99.44 E-value=7e-14 Score=102.94 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=34.8
Q ss_pred eEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eee
Q 031957 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFC 140 (150)
Q Consensus 103 MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~ 140 (150)
|||||++|||||||++||+|+||+|+ +++||+|+ +.+
T Consensus 1 MyAIi~~gGkQykV~~Gd~i~vekl~-~~~G~~v~~~~V 38 (103)
T 3r8s_R 1 MYAVFQSGGKQHRVSEGQTVRLEKLD-IATGETVEFAEV 38 (103)
T ss_dssp CEEEEECSSSEEEEETTCEEEESCCC-SCTTCEEEECCE
T ss_pred CEEEEEECCEEEEEeCCCEEEECCcC-CCCCCEEEEeEE
Confidence 99999999999999999999999997 89999999 544
No 4
>2zjr_O 50S ribosomal protein L21; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.155.1.1 PDB: 1nwx_P* 1nwy_P* 1pnu_P 1pny_P 1sm1_P* 1vor_S 1vou_S 1vow_S 1voy_S 1vp0_S 1xbp_P* 1yl3_2 2b66_V 2b9n_V 2b9p_V 2zjp_O* 2zjq_O 1nkw_P 3cf5_O* 3dll_O* ...
Probab=99.33 E-value=8.4e-14 Score=102.08 Aligned_cols=36 Identities=33% Similarity=0.570 Sum_probs=30.7
Q ss_pred eEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eee
Q 031957 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFC 140 (150)
Q Consensus 103 MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~ 140 (150)
|||||++|||||||++||+|+||+|+ +++||+|+ + +
T Consensus 1 myAIi~~gGkQykV~~Gd~i~vekl~-~~~G~~v~~~-V 37 (100)
T 2zjr_O 1 MFAIIQTGGKQYRVSEGDVIRVESLQ-GEAGDKVELK-A 37 (100)
T ss_dssp ----CCSSCCSCCSCCEEEEECCSCC-SSCCEEEECC-S
T ss_pred CEEEEEECCEEEEEeCCCEEEEcccC-CCCCCEEEEE-E
Confidence 99999999999999999999999997 89999999 6 6
No 5
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=83.08 E-value=1.4 Score=29.18 Aligned_cols=22 Identities=14% Similarity=0.285 Sum_probs=19.2
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.|+++.
T Consensus 69 ~~~~i~~~~~~l~~Gd~i~i~~ 90 (114)
T 2ozj_A 69 AVITFDDQKIDLVPEDVLMVPA 90 (114)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEecCCCEEEECC
Confidence 4578999999999999999864
No 6
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=81.84 E-value=1.7 Score=29.25 Aligned_cols=22 Identities=23% Similarity=0.377 Sum_probs=19.4
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.++++.
T Consensus 65 ~~~~i~~~~~~l~~Gd~~~i~~ 86 (128)
T 4i4a_A 65 AIIRINDEDFPVTKGDLIIIPL 86 (128)
T ss_dssp EEEEETTEEEEEETTCEEEECT
T ss_pred EEEEECCEEEEECCCcEEEECC
Confidence 4577899999999999999874
No 7
>2ivw_A PILP pilot protein; lipoprotein, pilus biogenesis, secretin; NMR {Neisseria meningitidis}
Probab=81.67 E-value=1.5 Score=32.48 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=20.6
Q ss_pred CCceEEEEEeCCEEEEEcCCCEE
Q 031957 100 REEIFAVVMIGSRQYIVFPGRFI 122 (150)
Q Consensus 100 r~~MYAIVeiGGKQYKVe~GdvI 122 (150)
....+|+|+..|+=|+|.+|++|
T Consensus 36 ~~~~~ALV~~dG~vyrVk~G~yi 58 (113)
T 2ivw_A 36 GQKVSGFIEAEGYVYTVGVGNYL 58 (113)
T ss_dssp SSSEEEEEEETTEEEEECSSEEE
T ss_pred CCeEEEEEEeCCcEEEEccCCEe
Confidence 34589999999999999999987
No 8
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=80.79 E-value=2.1 Score=26.80 Aligned_cols=22 Identities=23% Similarity=0.480 Sum_probs=18.9
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.++++.
T Consensus 60 ~~~~~~~~~~~l~~Gd~~~ip~ 81 (105)
T 1v70_A 60 VVVRVGEEEALLAPGMAAFAPA 81 (105)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEeCCCCEEEECC
Confidence 3478899999999999999874
No 9
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=80.12 E-value=2 Score=30.24 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=19.4
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.|++..
T Consensus 70 ~~~~~~g~~~~l~~GD~v~ip~ 91 (119)
T 3lwc_A 70 LSVSTDGETVTAGPGEIVYMPK 91 (119)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 4578899999999999999874
No 10
>2y4x_A PILP protein; biosynthetic protein; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 2y4y_A
Probab=79.68 E-value=1.9 Score=30.67 Aligned_cols=23 Identities=22% Similarity=0.167 Sum_probs=20.6
Q ss_pred CceEEEEEeCCEEEEEcCCCEEE
Q 031957 101 EEIFAVVMIGSRQYIVFPGRFIY 123 (150)
Q Consensus 101 ~~MYAIVeiGGKQYKVe~GdvI~ 123 (150)
..++|+|+..|+=|+|..|++|=
T Consensus 34 ~~~~ALV~~dg~v~~V~~G~yiG 56 (93)
T 2y4x_A 34 QGTFALVKGAGGVHRVRVGDYLG 56 (93)
T ss_dssp TEEEEEEEETTEEEEECTTCEET
T ss_pred CeEEEEEEeCCCEEEEccCCEec
Confidence 44899999999999999999873
No 11
>2lc4_A PILP protein; type IV pilus, structural protein; NMR {Pseudomonas aeruginosa}
Probab=79.28 E-value=1.9 Score=31.85 Aligned_cols=23 Identities=22% Similarity=0.167 Sum_probs=20.5
Q ss_pred CceEEEEEeCCEEEEEcCCCEEE
Q 031957 101 EEIFAVVMIGSRQYIVFPGRFIY 123 (150)
Q Consensus 101 ~~MYAIVeiGGKQYKVe~GdvI~ 123 (150)
..++|+|+..|+=|+|.+|++|=
T Consensus 41 ~~~~ALV~~dG~vyrVk~G~ylG 63 (111)
T 2lc4_A 41 QGTFALVKGAGGVHRVRVGDYLG 63 (111)
T ss_dssp TEEEEEEEETTEEEEEETTCEET
T ss_pred CeEEEEEEeCCcEEEEccCCEec
Confidence 44899999999999999999873
No 12
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=79.18 E-value=1.3 Score=30.40 Aligned_cols=22 Identities=14% Similarity=0.235 Sum_probs=19.6
Q ss_pred EEEEeCCEE--EEEcCCCEEEecc
Q 031957 105 AVVMIGSRQ--YIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQ--YKVe~GdvI~Ver 126 (150)
+.++++|+. |.+.+||.|+++.
T Consensus 64 ~~l~~~~~~~~~~l~~Gd~i~ipa 87 (112)
T 2opk_A 64 AGIECEGDTAPRVMRPGDWLHVPA 87 (112)
T ss_dssp EEEEETTCSSCEEECTTEEEEECT
T ss_pred EEEEECCEEEEEEECCCCEEEECC
Confidence 568899999 9999999999873
No 13
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=79.18 E-value=2.3 Score=29.06 Aligned_cols=22 Identities=23% Similarity=0.430 Sum_probs=19.3
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.+.+..
T Consensus 49 ~~~~i~~~~~~l~~Gd~~~i~p 70 (164)
T 2arc_A 49 GVVKNQGREFVCRPGDILLFPP 70 (164)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEecCCeEEEEcC
Confidence 4567899999999999999874
No 14
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=79.16 E-value=2.1 Score=27.49 Aligned_cols=22 Identities=14% Similarity=0.280 Sum_probs=18.8
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.++++.
T Consensus 55 ~~~~~~~~~~~l~~Gd~~~i~~ 76 (113)
T 2gu9_A 55 GEAIVDGHTQALQAGSLIAIER 76 (113)
T ss_dssp EEEEETTEEEEECTTEEEEECT
T ss_pred EEEEECCEEEEeCCCCEEEECC
Confidence 3467899999999999999873
No 15
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=78.36 E-value=2.1 Score=29.20 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=19.0
Q ss_pred EEEeCCEEEEEcCCCEEEecc
Q 031957 106 VVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVeiGGKQYKVe~GdvI~Ver 126 (150)
.+.++|+.|.+.+||.|+++.
T Consensus 68 ~~~i~~~~~~l~~Gd~i~ip~ 88 (114)
T 3fjs_A 68 EIGVDGAQRRLHQGDLLYLGA 88 (114)
T ss_dssp EEEETTEEEEECTTEEEEECT
T ss_pred EEEECCEEEEECCCCEEEECC
Confidence 378999999999999999874
No 16
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=77.85 E-value=1.7 Score=27.64 Aligned_cols=22 Identities=5% Similarity=0.143 Sum_probs=19.0
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.++++.
T Consensus 61 ~~~~~~~~~~~l~~Gd~~~ip~ 82 (102)
T 3d82_A 61 LQIAFRDQNITLQAGEMYVIPK 82 (102)
T ss_dssp EEEECSSCEEEEETTEEEEECT
T ss_pred EEEEECCEEEEEcCCCEEEECC
Confidence 4578899999999999999864
No 17
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=76.78 E-value=2.5 Score=28.53 Aligned_cols=22 Identities=9% Similarity=0.226 Sum_probs=19.6
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.++++.
T Consensus 59 ~~~~i~~~~~~l~~Gd~i~i~~ 80 (125)
T 3cew_A 59 GFITIDGEKIELQAGDWLRIAP 80 (125)
T ss_dssp EEEEETTEEEEEETTEEEEECT
T ss_pred EEEEECCEEEEeCCCCEEEECC
Confidence 5678999999999999999864
No 18
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=76.59 E-value=3.2 Score=27.26 Aligned_cols=22 Identities=9% Similarity=0.093 Sum_probs=19.0
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.++++.
T Consensus 65 ~~~~~~~~~~~l~~Gd~~~ip~ 86 (116)
T 2pfw_A 65 FHVNVDGVIKVLTAGDSFFVPP 86 (116)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEeCCCCEEEECc
Confidence 3577899999999999999874
No 19
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=75.56 E-value=3.1 Score=29.47 Aligned_cols=22 Identities=23% Similarity=0.427 Sum_probs=19.3
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.|+++.
T Consensus 79 ~~~~~~~~~~~l~~Gd~i~i~~ 100 (162)
T 3l2h_A 79 GTLTMENDQYPIAPGDFVGFPC 100 (162)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEeCCCCEEEECC
Confidence 3478999999999999999875
No 20
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=74.86 E-value=3.7 Score=26.87 Aligned_cols=22 Identities=27% Similarity=0.321 Sum_probs=18.9
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.++++.
T Consensus 71 ~~~~~~~~~~~l~~Gd~~~ip~ 92 (115)
T 1yhf_A 71 AEITIDQETYRVAEGQTIVMPA 92 (115)
T ss_dssp EEEEETTEEEEEETTCEEEECT
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 4467899999999999999864
No 21
>4av2_M PILP protein, type IV pilus biogenesis and competence protein P; protein transport, outer membrane protein; 26.00A {Neisseria meningitidis MC58}
Probab=74.60 E-value=2.9 Score=32.71 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=20.7
Q ss_pred CCceEEEEEeCCEEEEEcCCCEE
Q 031957 100 REEIFAVVMIGSRQYIVFPGRFI 122 (150)
Q Consensus 100 r~~MYAIVeiGGKQYKVe~GdvI 122 (150)
...++|+|+.+|+=|+|..|++|
T Consensus 104 ~~~~~alv~~dg~v~~V~~G~yl 126 (181)
T 4av2_M 104 GQKVSGFIEAEGYVYTVGVGNYL 126 (181)
T ss_dssp SSCCEEEEEETTEEEEECSSEEE
T ss_pred CCEEEEEEecCCCEEEEccCCEe
Confidence 44589999999999999999986
No 22
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=74.46 E-value=3.4 Score=29.69 Aligned_cols=22 Identities=14% Similarity=0.200 Sum_probs=19.5
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.|.++|+.|.+.+||.|+++.
T Consensus 86 ~~l~~~g~~~~l~~GD~i~~p~ 107 (133)
T 2pyt_A 86 LHVRHEGETMIAKAGDVMFIPK 107 (133)
T ss_dssp EEEEETTEEEEEETTCEEEECT
T ss_pred EEEEECCEEEEECCCcEEEECC
Confidence 4578999999999999999874
No 23
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=73.74 E-value=3.3 Score=28.54 Aligned_cols=22 Identities=14% Similarity=0.357 Sum_probs=19.1
Q ss_pred EEEEeC-CEEEEEcCCCEEEecc
Q 031957 105 AVVMIG-SRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiG-GKQYKVe~GdvI~Ver 126 (150)
+.+.++ |+.|.+.+||.|+++.
T Consensus 60 ~~~~i~~g~~~~l~~GD~i~ip~ 82 (101)
T 1o5u_A 60 VEVTTEDGKKYVIEKGDLVTFPK 82 (101)
T ss_dssp EEEEETTCCEEEEETTCEEEECT
T ss_pred EEEEECCCCEEEECCCCEEEECC
Confidence 457788 9999999999999874
No 24
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=73.40 E-value=2 Score=33.11 Aligned_cols=21 Identities=10% Similarity=0.036 Sum_probs=18.1
Q ss_pred EEEeCCEEEEEcCCCEEEecc
Q 031957 106 VVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVeiGGKQYKVe~GdvI~Ver 126 (150)
.++++|+.|.|.+||.|+|+.
T Consensus 80 ~v~idge~~~l~~GD~v~IPp 100 (157)
T 4h7l_A 80 TIELNGQSYPLTKLLAISIPP 100 (157)
T ss_dssp EEEETTEEEECCTTEEEEECT
T ss_pred EEEECCEEEEeCCCCEEEECC
Confidence 344999999999999999874
No 25
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=73.05 E-value=3.7 Score=30.17 Aligned_cols=22 Identities=23% Similarity=0.270 Sum_probs=19.4
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.|+++.
T Consensus 87 ~~~~i~~~~~~l~~Gd~i~ip~ 108 (167)
T 3ibm_A 87 AEVVLDDRVEPLTPLDCVYIAP 108 (167)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 4567999999999999999875
No 26
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=72.72 E-value=3.5 Score=28.62 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=19.0
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
..+.++|+.|.+.+||.++++.
T Consensus 89 ~~~~i~~~~~~l~~Gd~i~i~~ 110 (133)
T 1o4t_A 89 GVFHDNGKDVPIKAGDVCFTDS 110 (133)
T ss_dssp EEEEETTEEEEEETTEEEEECT
T ss_pred EEEEECCEEEEeCCCcEEEECC
Confidence 4478999999999999999863
No 27
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=72.29 E-value=4 Score=30.03 Aligned_cols=22 Identities=14% Similarity=0.299 Sum_probs=19.6
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.|+++.
T Consensus 75 ~~v~v~g~~~~l~~Gd~i~ip~ 96 (156)
T 3kgz_A 75 GQCLVGETISDVAQGDLVFIPP 96 (156)
T ss_dssp EEEEETTEEEEEETTCEEEECT
T ss_pred EEEEECCEEEEeCCCCEEEECC
Confidence 5578999999999999999874
No 28
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=72.21 E-value=3.9 Score=30.90 Aligned_cols=22 Identities=18% Similarity=0.410 Sum_probs=19.1
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.|.++|+.|.+.+||.|++++
T Consensus 95 ~~l~i~g~~~~l~~GD~i~iP~ 116 (151)
T 4axo_A 95 LDIIIDGRKVSASSGELIFIPK 116 (151)
T ss_dssp EEEEETTEEEEEETTCEEEECT
T ss_pred EEEEECCEEEEEcCCCEEEECC
Confidence 3467899999999999999874
No 29
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=72.02 E-value=4.1 Score=29.55 Aligned_cols=22 Identities=14% Similarity=0.016 Sum_probs=19.2
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.|+++.
T Consensus 137 ~~~~~~~~~~~l~~GD~i~i~~ 158 (192)
T 1y9q_A 137 MKVFFDEQWHELQQGEHIRFFS 158 (192)
T ss_dssp EEEEETTEEEEECTTCEEEEEC
T ss_pred EEEEECCEEEEeCCCCEEEEcC
Confidence 3577899999999999999874
No 30
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=71.49 E-value=3.5 Score=27.02 Aligned_cols=22 Identities=9% Similarity=0.135 Sum_probs=19.0
Q ss_pred EEEEeCC-EEEEEcCCCEEEecc
Q 031957 105 AVVMIGS-RQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGG-KQYKVe~GdvI~Ver 126 (150)
+.+.++| +.|.+.+||.++++.
T Consensus 59 ~~~~~~~~~~~~l~~Gd~~~ip~ 81 (107)
T 2i45_A 59 MAVDFADGGSMTIREGEMAVVPK 81 (107)
T ss_dssp EEEEETTSCEEEECTTEEEEECT
T ss_pred EEEEECCCcEEEECCCCEEEECC
Confidence 4578888 999999999999874
No 31
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=71.44 E-value=3 Score=27.93 Aligned_cols=22 Identities=9% Similarity=-0.076 Sum_probs=19.1
Q ss_pred EEEEe-CCEEEEEcCCCEEEecc
Q 031957 105 AVVMI-GSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVei-GGKQYKVe~GdvI~Ver 126 (150)
+.+.+ +|+.|.+.+||.++++.
T Consensus 71 ~~~~~~~~~~~~l~~Gd~~~i~~ 93 (125)
T 3h8u_A 71 AEYHQGNGIVTHLKAGDIAIAKP 93 (125)
T ss_dssp EEEECSTTCEEEEETTEEEEECT
T ss_pred EEEEECCCeEEEeCCCCEEEECC
Confidence 55678 99999999999999874
No 32
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=71.39 E-value=4.2 Score=27.15 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=19.0
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
..+.++|+.|.+.+||.++++.
T Consensus 72 ~~~~~~~~~~~l~~Gd~~~ip~ 93 (126)
T 4e2g_A 72 LELTIGEETRVLRPGMAYTIPG 93 (126)
T ss_dssp EEEEETTEEEEECTTEEEEECT
T ss_pred EEEEECCEEEEeCCCCEEEECC
Confidence 3478899999999999999873
No 33
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=70.61 E-value=4.4 Score=31.14 Aligned_cols=20 Identities=10% Similarity=0.240 Sum_probs=18.6
Q ss_pred EEeCCEEEEEcCCCEEEecc
Q 031957 107 VMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 107 VeiGGKQYKVe~GdvI~Ver 126 (150)
|.++|+.|.+.+||.+++++
T Consensus 123 vtl~g~~~~L~~Gds~~iP~ 142 (166)
T 2vpv_A 123 VTVCKNKFLSVKGSTFQIPA 142 (166)
T ss_dssp EEETTEEEEEETTCEEEECT
T ss_pred EEECCEEEEEcCCCEEEECC
Confidence 78999999999999999974
No 34
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=70.17 E-value=4.7 Score=27.36 Aligned_cols=22 Identities=5% Similarity=-0.002 Sum_probs=18.9
Q ss_pred EEEEeCC-EEEEEcCCCEEEecc
Q 031957 105 AVVMIGS-RQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGG-KQYKVe~GdvI~Ver 126 (150)
..+.++| +.|.+.+||.++++.
T Consensus 75 ~~~~~~~~~~~~l~~Gd~~~ip~ 97 (134)
T 2o8q_A 75 VEFEYEDIGAVMLEAGGSAFQPP 97 (134)
T ss_dssp EEEEETTTEEEEEETTCEEECCT
T ss_pred EEEEECCcEEEEecCCCEEEECC
Confidence 3478899 999999999999864
No 35
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=69.38 E-value=3.1 Score=27.62 Aligned_cols=22 Identities=9% Similarity=0.165 Sum_probs=19.2
Q ss_pred EEEEeCCEEE-EEcCCCEEEecc
Q 031957 105 AVVMIGSRQY-IVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQY-KVe~GdvI~Ver 126 (150)
+.+.++|+.| .+.+||.++++.
T Consensus 58 ~~~~i~~~~~~~l~~Gd~i~ip~ 80 (117)
T 2b8m_A 58 MTLTLEDQEPHNYKEGNIVYVPF 80 (117)
T ss_dssp EEEEETTSCCEEEETTCEEEECT
T ss_pred EEEEECCEEEEEeCCCCEEEECC
Confidence 4578899999 999999999873
No 36
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=69.37 E-value=4.4 Score=33.26 Aligned_cols=22 Identities=23% Similarity=0.391 Sum_probs=20.0
Q ss_pred EEEEEeCCEEEEEcCCCEEEec
Q 031957 104 FAVVMIGSRQYIVFPGRFIYTQ 125 (150)
Q Consensus 104 YAIVeiGGKQYKVe~GdvI~Ve 125 (150)
-+++.++|+.|.|++||+|++.
T Consensus 217 ~g~y~l~~~~~~V~~GD~i~~~ 238 (266)
T 4e2q_A 217 QGIYRLGDNWYPVQAGDVIWMA 238 (266)
T ss_dssp EEEEEETTEEEEEETTCEEEEC
T ss_pred eEEEEECCEEEEecCCCEEEEC
Confidence 3789999999999999999975
No 37
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=67.87 E-value=5.2 Score=31.37 Aligned_cols=22 Identities=18% Similarity=0.363 Sum_probs=19.8
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.|.+||.|+++.
T Consensus 214 ~~~~i~~~~~~l~~GD~i~i~~ 235 (274)
T 1sef_A 214 GMYNLDNEWYPVEKGDYIFMSA 235 (274)
T ss_dssp EEEEETTEEEEEETTCEEEECT
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 5678999999999999999874
No 38
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=67.35 E-value=4.7 Score=27.24 Aligned_cols=22 Identities=27% Similarity=0.271 Sum_probs=18.9
Q ss_pred EEEE--eCCEEEEEcCCCEEEecc
Q 031957 105 AVVM--IGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVe--iGGKQYKVe~GdvI~Ver 126 (150)
+.+. ++|+.|.+.+||.++++.
T Consensus 70 ~~~~~~~~~~~~~l~~Gd~~~ip~ 93 (145)
T 3ht1_A 70 MGLVLPDQGRTEEVGPGEAIFIPR 93 (145)
T ss_dssp EEEEEGGGTEEEEECTTCEEEECT
T ss_pred EEEEEeECCEEEEECCCCEEEECC
Confidence 3467 999999999999999874
No 39
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=66.95 E-value=6 Score=29.42 Aligned_cols=21 Identities=19% Similarity=0.207 Sum_probs=18.9
Q ss_pred EEEeCCEEEEEcCCCEEEecc
Q 031957 106 VVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVeiGGKQYKVe~GdvI~Ver 126 (150)
.+.++|+.|.+.+||.|+++.
T Consensus 85 ~~~v~g~~~~l~~GD~i~ip~ 105 (166)
T 3jzv_A 85 HAMVGRAVSAVAPYDLVTIPG 105 (166)
T ss_dssp EEEETTEEEEECTTCEEEECT
T ss_pred EEEECCEEEEeCCCCEEEECC
Confidence 478999999999999999874
No 40
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=66.03 E-value=3.5 Score=26.50 Aligned_cols=22 Identities=5% Similarity=-0.115 Sum_probs=18.4
Q ss_pred EEEEeC-CEEEEEcCCCEEEecc
Q 031957 105 AVVMIG-SRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiG-GKQYKVe~GdvI~Ver 126 (150)
+.+.++ |+.|.+.+||.++++.
T Consensus 66 ~~~~~~~~~~~~l~~Gd~~~ip~ 88 (110)
T 2q30_A 66 GEFVGDGDAVIPAPRGAVLVAPI 88 (110)
T ss_dssp EEEECGGGCEEEECTTEEEEEET
T ss_pred EEEEeCCCEEEEECCCCEEEeCC
Confidence 346787 7999999999999874
No 41
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=65.92 E-value=6 Score=30.65 Aligned_cols=21 Identities=19% Similarity=0.336 Sum_probs=19.1
Q ss_pred EEEEeCCEEEEEcCCCEEEec
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQ 125 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ve 125 (150)
+++.+||+-|.|++||.|++.
T Consensus 197 ~~~~~~~~~~~l~~GD~~~~~ 217 (246)
T 1sfn_A 197 GLYKLEENYYPVTAGDIIWMG 217 (246)
T ss_dssp EEEEETTEEEEEETTCEEEEC
T ss_pred EEEEECCEEEEcCCCCEEEEC
Confidence 577899999999999999986
No 42
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=64.60 E-value=4.7 Score=27.51 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=18.8
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
..+.++|+.|.+.+||.++++.
T Consensus 79 ~~~~i~~~~~~l~~Gd~i~ip~ 100 (126)
T 1vj2_A 79 LTVLKEQGEETVEEGFYIFVEP 100 (126)
T ss_dssp EEEECSSCEEEEETTEEEEECT
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 3467899999999999999864
No 43
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=64.19 E-value=4.8 Score=31.17 Aligned_cols=22 Identities=18% Similarity=0.252 Sum_probs=19.6
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.|.+||.|+++.
T Consensus 211 ~~~~i~~~~~~l~~GD~i~~~~ 232 (261)
T 1rc6_A 211 GVYNLDNNWIPVKKGDYIFMGA 232 (261)
T ss_dssp EEEESSSCEEEEETTCEEEECS
T ss_pred EEEEECCEEEEeCCCCEEEECC
Confidence 5678999999999999999864
No 44
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=64.03 E-value=7.6 Score=28.23 Aligned_cols=23 Identities=13% Similarity=0.037 Sum_probs=19.9
Q ss_pred EEEEeCCEEEEEcCCCEEEeccc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQRL 127 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~VerL 127 (150)
+.+.++|+.|.+.+||.|+++.-
T Consensus 76 ~~~~~~~~~~~l~~GD~i~ip~~ 98 (163)
T 3i7d_A 76 LVLVDDQGEHPMVPGDCAAFPAG 98 (163)
T ss_dssp EEEEETTEEEEECTTCEEEECTT
T ss_pred EEEEECCEEEEeCCCCEEEECCC
Confidence 44789999999999999998763
No 45
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=60.96 E-value=7.4 Score=29.61 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=19.3
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.|+++.
T Consensus 184 ~~~~i~g~~~~l~~Gd~i~ip~ 205 (227)
T 3rns_A 184 GKYYVDGKPFIVKKGESAVLPA 205 (227)
T ss_dssp EEEEETTEEEEEETTEEEEECT
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 4578999999999999999864
No 46
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=60.85 E-value=9.4 Score=27.57 Aligned_cols=21 Identities=10% Similarity=0.311 Sum_probs=18.5
Q ss_pred EEEeCC----EEEEEcCCCEEEecc
Q 031957 106 VVMIGS----RQYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVeiGG----KQYKVe~GdvI~Ver 126 (150)
.+.++| +.|.+.+||.++++.
T Consensus 152 ~~~~~~~~~~~~~~l~~GD~~~~~~ 176 (198)
T 2bnm_A 152 HMKWGDKENPKEALLPTGASMFVEE 176 (198)
T ss_dssp EEEESCTTSCEEEEECTTCEEEECT
T ss_pred EEEECCcCCcccEEECCCCEEEeCC
Confidence 477899 999999999999874
No 47
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=60.59 E-value=8.5 Score=25.01 Aligned_cols=22 Identities=5% Similarity=-0.141 Sum_probs=18.7
Q ss_pred EEEEeCC--EEEEEcCCCEEEecc
Q 031957 105 AVVMIGS--RQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGG--KQYKVe~GdvI~Ver 126 (150)
+.++++| +.|.+.+||.++++.
T Consensus 50 ~~~~~~~g~~~~~l~~Gd~~~~p~ 73 (97)
T 2fqp_A 50 LLLETPEGSVTSQLTRGVSYTRPE 73 (97)
T ss_dssp EEEEETTEEEEEEECTTCCEEECT
T ss_pred EEEEeCCCCEEEEEcCCCEEEeCC
Confidence 4578887 899999999999873
No 48
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=59.93 E-value=9.2 Score=29.30 Aligned_cols=22 Identities=5% Similarity=-0.059 Sum_probs=19.7
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.|.++|+.|.+.+||.|+++.
T Consensus 177 ~~~~i~~~~~~l~~Gd~i~ip~ 198 (243)
T 3h7j_A 177 YDMTVEGCTVEMKFGTAYFCEP 198 (243)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 4589999999999999999874
No 49
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=58.75 E-value=9.6 Score=27.00 Aligned_cols=21 Identities=14% Similarity=0.271 Sum_probs=18.3
Q ss_pred EEEeCC---------EEEEEcCCCEEEecc
Q 031957 106 VVMIGS---------RQYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVeiGG---------KQYKVe~GdvI~Ver 126 (150)
.+.++| +.|.+.+||.+++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~ 102 (163)
T 1lr5_A 73 TLLMGSSSLKYPGQPQEIPFFQNTTFSIPV 102 (163)
T ss_dssp EEEECCSSSSSCCSCEEEEECTTEEEEECT
T ss_pred EEEECCccccccCccEEEEeCCCCEEEECC
Confidence 467888 999999999999873
No 50
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=58.16 E-value=8.5 Score=27.43 Aligned_cols=22 Identities=14% Similarity=0.004 Sum_probs=18.8
Q ss_pred EEEEe-CCEEEEEcCCCEEEecc
Q 031957 105 AVVMI-GSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVei-GGKQYKVe~GdvI~Ver 126 (150)
+.|.+ +|+.+.+.+||.+++..
T Consensus 79 ~~l~~~~g~~~~l~~GD~~~ip~ 101 (123)
T 3bcw_A 79 ARLVDPDGTVHAVKAGDAFIMPE 101 (123)
T ss_dssp EEEECTTCCEEEEETTCEEEECT
T ss_pred EEEEECCCeEEEECCCCEEEECC
Confidence 45677 89999999999999875
No 51
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=57.80 E-value=11 Score=29.38 Aligned_cols=21 Identities=14% Similarity=0.327 Sum_probs=18.4
Q ss_pred EEEeCCEEEEEcCCCEEEecc
Q 031957 106 VVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVeiGGKQYKVe~GdvI~Ver 126 (150)
.+.++|+.|.+.+||+++++.
T Consensus 251 ~~~i~~~~~~l~~GD~~~ip~ 271 (337)
T 1y3t_A 251 TMWTDGQEIQLNPGDFLHVPA 271 (337)
T ss_dssp EEEETTEEEEECTTCEEEECT
T ss_pred EEEECCEEEEECCCCEEEECC
Confidence 457899999999999999874
No 52
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=55.09 E-value=11 Score=29.21 Aligned_cols=21 Identities=10% Similarity=0.362 Sum_probs=18.7
Q ss_pred EEEeCCEEEEEcCCCEEEecc
Q 031957 106 VVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVeiGGKQYKVe~GdvI~Ver 126 (150)
.+.++|+.|.+.+||.++++.
T Consensus 93 ~~~~~~~~~~L~~Gd~~~~~~ 113 (261)
T 1rc6_A 93 TAKAEGKTFALSEGGYLYCPP 113 (261)
T ss_dssp EEEETTEEEEEETTEEEEECT
T ss_pred EEEECCEEEEECCCCEEEECC
Confidence 477999999999999999873
No 53
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=54.12 E-value=9.7 Score=27.01 Aligned_cols=22 Identities=9% Similarity=0.046 Sum_probs=18.9
Q ss_pred EEEEeCCEE-EEEcCCCEEEecc
Q 031957 105 AVVMIGSRQ-YIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQ-YKVe~GdvI~Ver 126 (150)
..+.++|+. |.+.+||.|+++.
T Consensus 79 ~~~~~~~~~~~~l~~Gd~i~ip~ 101 (147)
T 2f4p_A 79 GFYQERGKPARILKKGDVVEIPP 101 (147)
T ss_dssp EEEEETTSCCEEEETTCEEEECT
T ss_pred EEEEECCEEEEEECCCCEEEECC
Confidence 457789998 9999999999874
No 54
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=52.74 E-value=10 Score=28.86 Aligned_cols=22 Identities=14% Similarity=0.276 Sum_probs=18.7
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+-+.++|+.+.+.+||+|+++.
T Consensus 68 ~~~~i~~~~~~l~~Gd~~~~p~ 89 (227)
T 3rns_A 68 GEIFIENNKKTISNGDFLEITA 89 (227)
T ss_dssp EEEEESSCEEEEETTEEEEECS
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 3456899999999999999873
No 55
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=52.46 E-value=14 Score=29.45 Aligned_cols=22 Identities=23% Similarity=0.288 Sum_probs=19.5
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+++.++|+-|.|++||+|++..
T Consensus 223 ~~~~~~~~~~~v~~GD~~~~~~ 244 (278)
T 1sq4_A 223 AVYRLNQDWVEVEAGDFMWLRA 244 (278)
T ss_dssp EEEEETTEEEEEETTCEEEEEE
T ss_pred EEEEECCEEEEeCCCCEEEECC
Confidence 5778999999999999999863
No 56
>3oss_C Type 2 secretion system, GSPC; general secretory pathway, HR domain, lanthanide-B TAG, protein transport; 2.63A {Escherichia coli}
Probab=52.35 E-value=9.7 Score=25.75 Aligned_cols=22 Identities=23% Similarity=0.231 Sum_probs=19.9
Q ss_pred ceEEEEEeCCEEEEEcCCCEEE
Q 031957 102 EIFAVVMIGSRQYIVFPGRFIY 123 (150)
Q Consensus 102 ~MYAIVeiGGKQYKVe~GdvI~ 123 (150)
.-.|||+.+|+|-.-..||.|.
T Consensus 19 ~s~AII~~~g~q~~Y~vGd~i~ 40 (68)
T 3oss_C 19 RPGAVIEEGGKQQVYLQGERLD 40 (68)
T ss_dssp SCEEEEEETTEEEEECTTCBCS
T ss_pred CcEEEEecCCcEeEEECCCEeC
Confidence 6789999999999999999874
No 57
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=50.92 E-value=9.3 Score=26.81 Aligned_cols=22 Identities=32% Similarity=0.363 Sum_probs=18.5
Q ss_pred EEEEeCCEE------EEEcCCCEEEecc
Q 031957 105 AVVMIGSRQ------YIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQ------YKVe~GdvI~Ver 126 (150)
+.+.++|+. |.+.+||.|+++.
T Consensus 75 ~~~~i~~~~~~~~~~~~l~~Gd~i~ip~ 102 (148)
T 2oa2_A 75 GLVQMGHRQDNLHFQEEVFDDYAILIPA 102 (148)
T ss_dssp EEEEEESBTTBCCEEEEEETTCEEEECT
T ss_pred EEEEECCccccceeeEEECCCCEEEECC
Confidence 456788888 9999999999873
No 58
>2lnv_A General secretion pathway protein C; transport protein; NMR {Dickeya dadantii}
Probab=50.02 E-value=6.4 Score=28.66 Aligned_cols=24 Identities=8% Similarity=0.001 Sum_probs=21.0
Q ss_pred CCceEEEEEeCCEEEEEcCCCEEE
Q 031957 100 REEIFAVVMIGSRQYIVFPGRFIY 123 (150)
Q Consensus 100 r~~MYAIVeiGGKQYKVe~GdvI~ 123 (150)
...-+|||+.+|+|.....||.|.
T Consensus 37 ~~~S~AII~~~g~Q~~Y~vGd~I~ 60 (104)
T 2lnv_A 37 DSRSIAIISKDNEQFSRGVNEEVP 60 (104)
T ss_dssp SSSCEEEEESSSCCEEECTTEECS
T ss_pred ccccEEEEEcCCeEeEEeCCCCcC
Confidence 445789999999999999999875
No 59
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=49.69 E-value=12 Score=29.83 Aligned_cols=21 Identities=10% Similarity=0.308 Sum_probs=18.8
Q ss_pred EEEeCCEEEEEcCCCEEEecc
Q 031957 106 VVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVeiGGKQYKVe~GdvI~Ver 126 (150)
.+.++|+.|.+.+||.|+++.
T Consensus 102 ~v~v~g~~~~L~~GD~i~ip~ 122 (278)
T 1sq4_A 102 SLTLQGQVHAMQPGGYAFIPP 122 (278)
T ss_dssp EEEESSCEEEECTTEEEEECT
T ss_pred EEEECCEEEEECCCCEEEECC
Confidence 478999999999999999873
No 60
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=49.30 E-value=17 Score=28.12 Aligned_cols=22 Identities=9% Similarity=0.379 Sum_probs=19.0
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+.+||.|+++.
T Consensus 78 ~~~~~~~~~~~l~~Gd~~~~p~ 99 (337)
T 1y3t_A 78 LELTLDGERYLLISGDYANIPA 99 (337)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 3467899999999999999873
No 61
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=48.72 E-value=11 Score=29.10 Aligned_cols=22 Identities=14% Similarity=0.240 Sum_probs=19.3
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.|.++|+.|.+.+||.++++.
T Consensus 79 ~~~~~~~~~~~l~~Gd~~~~p~ 100 (246)
T 1sfn_A 79 VDVAVGGETRTLREYDYVYLPA 100 (246)
T ss_dssp EEEECSSCEEEECTTEEEEECT
T ss_pred EEEEECCEEEEECCCCEEEECC
Confidence 4578999999999999999863
No 62
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=48.33 E-value=11 Score=29.40 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=18.7
Q ss_pred EEEeCCEEEEEcCCCEEEecc
Q 031957 106 VVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVeiGGKQYKVe~GdvI~Ver 126 (150)
.|.++|+.|.+.+||.++++.
T Consensus 96 ~~~~~~~~~~L~~GD~~~~~~ 116 (274)
T 1sef_A 96 RVSDGQETHELEAGGYAYFTP 116 (274)
T ss_dssp EEECSSCEEEEETTEEEEECT
T ss_pred EEEECCEEEEECCCCEEEECC
Confidence 477999999999999999873
No 63
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=47.54 E-value=9 Score=27.34 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=27.1
Q ss_pred EEEEEeC-CEEEEEcCCCEEEecccCCCCCCCeEE-ee
Q 031957 104 FAVVMIG-SRQYIVFPGRFIYTQRLKGANVNDKVC-NF 139 (150)
Q Consensus 104 YAIVeiG-GKQYKVe~GdvI~VerLkgaEvGD~V~-~~ 139 (150)
.|||+++ |+.|.|.....|..+.| ++|+.|- |.
T Consensus 51 ~~iVk~s~g~~~~V~v~~~Vd~~~L---kpG~rVaLn~ 85 (109)
T 2wg5_A 51 RVVVKSSTGPKFVVNTSQYINEEEL---KPGARVALNQ 85 (109)
T ss_dssp CEEEEETTSCEEEECBCTTSCTTTC---CTTCEEEEET
T ss_pred EEEEEeCCCCEEEEEcccccCHHHC---CCCCEEEECC
Confidence 4899988 99999999998886665 6899888 54
No 64
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=45.05 E-value=13 Score=27.43 Aligned_cols=16 Identities=25% Similarity=0.204 Sum_probs=14.5
Q ss_pred CEEEEEcCCCEEEecc
Q 031957 111 SRQYIVFPGRFIYTQR 126 (150)
Q Consensus 111 GKQYKVe~GdvI~Ver 126 (150)
++.|.+.+||+++++.
T Consensus 82 ~~~~~l~~GDv~~~P~ 97 (178)
T 1dgw_A 82 RDTYKLDQGDAIKIQA 97 (178)
T ss_dssp EEEEEEETTEEEEECT
T ss_pred cEEEEECCCCEEEECC
Confidence 7899999999999874
No 65
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=42.43 E-value=24 Score=29.18 Aligned_cols=21 Identities=14% Similarity=0.273 Sum_probs=18.1
Q ss_pred EEeCCEEEEEcCCCEEEeccc
Q 031957 107 VMIGSRQYIVFPGRFIYTQRL 127 (150)
Q Consensus 107 VeiGGKQYKVe~GdvI~VerL 127 (150)
+.+||+.|.+++||+++|..-
T Consensus 301 ~~v~~~~~~~~~GD~~~vP~~ 321 (354)
T 2d40_A 301 VIIGNETFSFSAKDIFVVPTW 321 (354)
T ss_dssp EEETTEEEEEETTCEEEECTT
T ss_pred EEECCEEEEEcCCCEEEECCC
Confidence 457999999999999998763
No 66
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=42.36 E-value=23 Score=30.54 Aligned_cols=22 Identities=5% Similarity=0.148 Sum_probs=18.6
Q ss_pred EEEEeCCEEEEEcCCCEEEecc
Q 031957 105 AVVMIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~Ver 126 (150)
+.+.++|+.|.+++||+|+|..
T Consensus 325 G~~~V~ge~~~~~~GD~~~iP~ 346 (394)
T 3bu7_A 325 GYSIVGGKRFDWSEHDIFCVPA 346 (394)
T ss_dssp EEEEETTEEEEECTTCEEEECT
T ss_pred EEEEECCEEEEEeCCCEEEECC
Confidence 3456899999999999999864
No 67
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=40.54 E-value=24 Score=23.94 Aligned_cols=41 Identities=7% Similarity=-0.050 Sum_probs=28.8
Q ss_pred CCCceEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-ee
Q 031957 99 KREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NF 139 (150)
Q Consensus 99 ~r~~MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~ 139 (150)
|..-.|.|++-|.-.-++..||.+.|++.--...|..+. ++
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~ 44 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNI 44 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECC
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEecc
Confidence 445678899888654468999999998763234566666 44
No 68
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=38.80 E-value=15 Score=27.36 Aligned_cols=22 Identities=14% Similarity=0.377 Sum_probs=17.4
Q ss_pred EEEEeCCEE-----EEEcCCCEEEecc
Q 031957 105 AVVMIGSRQ-----YIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGGKQ-----YKVe~GdvI~Ver 126 (150)
+.+.++|+. |.+.+||.|+++.
T Consensus 107 ~~~~i~~~~g~~~~~~l~~GD~v~ip~ 133 (190)
T 1x82_A 107 GGMLLQTPEGDAKWISMEPGTVVYVPP 133 (190)
T ss_dssp EEEEEECTTCCEEEEEECTTCEEEECT
T ss_pred EEEEEcCcCCcEEEEEECCCcEEEECC
Confidence 345677777 9999999999873
No 69
>2cqa_A RUVB-like 2; TIP48, TIP49B, reptin 52, ECP-51, TAP54-beta, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.40.4.14
Probab=38.52 E-value=9.1 Score=27.78 Aligned_cols=28 Identities=21% Similarity=0.355 Sum_probs=18.7
Q ss_pred ceEEEEEeCCEEE------EEcCCCEEEecccCC
Q 031957 102 EIFAVVMIGSRQY------IVFPGRFIYTQRLKG 129 (150)
Q Consensus 102 ~MYAIVeiGGKQY------KVe~GdvI~VerLkg 129 (150)
+|-...+.|.+-| ||+.||+|++|.-.|
T Consensus 43 d~ek~l~lg~~i~e~L~kekV~~GDVI~Id~~sG 76 (95)
T 2cqa_A 43 EMETIYDLGTKMIESLTKDKVQAGDVITIDKATG 76 (95)
T ss_dssp SSEEEEEECSHHHHHHHHTTCCTTSEEEEETTTT
T ss_pred CCcEEEeCCHHHHHHHHHcCceeCCEEEEEccCC
Confidence 3444555555533 899999999987654
No 70
>2vd8_A Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A* 3ha1_A*
Probab=37.78 E-value=44 Score=27.33 Aligned_cols=33 Identities=3% Similarity=-0.058 Sum_probs=25.7
Q ss_pred EeCCEEEEE---cCCCEEEecccCCCCCCCeEEeee
Q 031957 108 MIGSRQYIV---FPGRFIYTQRLKGANVNDKVCNFC 140 (150)
Q Consensus 108 eiGGKQYKV---e~GdvI~VerLkgaEvGD~V~~~~ 140 (150)
-++|+++.| -..|.+.+|.+..+++||.|..+-
T Consensus 305 ~v~g~~~~ivG~vcmD~~~vd~~~~~~~GD~v~l~g 340 (391)
T 2vd8_A 305 LVNGXRVPIVGRVTMDQFMIHLPCEVPLGTXVTLIG 340 (391)
T ss_dssp EETTEEEEEESCCCSSCEEEEESSCCCTTCEEEEEE
T ss_pred EECCeecceecceecceeEeecCCCCCCCCEEEEEC
Confidence 447888887 357889999876788999999543
No 71
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=37.22 E-value=24 Score=28.91 Aligned_cols=22 Identities=23% Similarity=0.267 Sum_probs=19.2
Q ss_pred EEEEeCC-EEEEEcCCCEEEecc
Q 031957 105 AVVMIGS-RQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVeiGG-KQYKVe~GdvI~Ver 126 (150)
+.|.++| +.|.+.+||+|+|..
T Consensus 283 ~~i~i~g~~~~~l~~Gd~~~iPa 305 (350)
T 1juh_A 283 VVVQIGDYAATELGSGDVAFIPG 305 (350)
T ss_dssp EEEEETTSCCEEECTTCEEEECT
T ss_pred EEEEECCeEEEEeCCCCEEEECC
Confidence 4578999 899999999999874
No 72
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=35.90 E-value=30 Score=26.42 Aligned_cols=21 Identities=10% Similarity=0.097 Sum_probs=17.7
Q ss_pred EEEEeCCEEEEEcCCCEEE-ec
Q 031957 105 AVVMIGSRQYIVFPGRFIY-TQ 125 (150)
Q Consensus 105 AIVeiGGKQYKVe~GdvI~-Ve 125 (150)
..+.++|+.|.+.+||.|+ ++
T Consensus 65 ~~~~~~~~~~~l~~Gd~i~~ip 86 (243)
T 3h7j_A 65 LMMTVGDVTRKMTALESAYIAP 86 (243)
T ss_dssp EEEEETTEEEEEETTTCEEEEC
T ss_pred EEEEECCEEEEECCCCEEEEcC
Confidence 3477899999999999886 65
No 73
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=33.84 E-value=27 Score=28.80 Aligned_cols=19 Identities=21% Similarity=0.342 Sum_probs=17.1
Q ss_pred EeCCEEEEEcCCCEEEecc
Q 031957 108 MIGSRQYIVFPGRFIYTQR 126 (150)
Q Consensus 108 eiGGKQYKVe~GdvI~Ver 126 (150)
.++|+.|.+++||.|+++.
T Consensus 135 ~v~g~~~~l~~GD~~~iP~ 153 (354)
T 2d40_A 135 AVDGERTPMNEGDFILTPQ 153 (354)
T ss_dssp EETTEEEECCTTCEEEECT
T ss_pred EECCEEEEEcCCCEEEECC
Confidence 6799999999999999863
No 74
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=33.49 E-value=22 Score=27.26 Aligned_cols=19 Identities=16% Similarity=0.191 Sum_probs=15.0
Q ss_pred EeCCEEEE--EcCCCEEEecc
Q 031957 108 MIGSRQYI--VFPGRFIYTQR 126 (150)
Q Consensus 108 eiGGKQYK--Ve~GdvI~Ver 126 (150)
+.+|+.|+ +++||+|.|..
T Consensus 116 ~~~d~~~~~~l~~GDli~IP~ 136 (179)
T 1zrr_A 116 HIGDEVFQVLCEKNDLISVPA 136 (179)
T ss_dssp ECSSCEEEEECCCSCEEEECT
T ss_pred EeCCEEEEEEECCCCEEEECC
Confidence 34788766 89999999864
No 75
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=32.82 E-value=5.6 Score=31.13 Aligned_cols=47 Identities=6% Similarity=-0.011 Sum_probs=28.0
Q ss_pred CCceEEEEEeCCEEEEEcCCCEEEecccCCCC-CCCeEE-eeeccCCcce
Q 031957 100 REEIFAVVMIGSRQYIVFPGRFIYTQRLKGAN-VNDKVC-NFCAFSPLQF 147 (150)
Q Consensus 100 r~~MYAIVeiGGKQYKVe~GdvI~VerLkgaE-vGD~V~-~~~~~~~~~~ 147 (150)
..-.|-|++.|.- .++..||.+.|+...-.. .|..+. .+-.+.|..|
T Consensus 49 ~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~ 97 (338)
T 2if4_A 49 EKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIEL 97 (338)
T ss_dssp TTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEE
T ss_pred CCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEE
Confidence 3447777776643 389999999998752112 355555 3333445444
No 76
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=32.69 E-value=37 Score=26.91 Aligned_cols=17 Identities=12% Similarity=0.153 Sum_probs=15.1
Q ss_pred CCE--EEEEcCCCEEEecc
Q 031957 110 GSR--QYIVFPGRFIYTQR 126 (150)
Q Consensus 110 GGK--QYKVe~GdvI~Ver 126 (150)
+|+ .|.+.+||+++++.
T Consensus 274 ~g~~~~~~l~~GD~~~ip~ 292 (361)
T 2vqa_A 274 EGKASVSRLQQGDVGYVPK 292 (361)
T ss_dssp TTCEEEEEECTTCEEEECT
T ss_pred CCcEEEEEECCCCEEEECC
Confidence 787 89999999999874
No 77
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=31.15 E-value=26 Score=28.67 Aligned_cols=21 Identities=10% Similarity=0.061 Sum_probs=17.6
Q ss_pred EEEEeC-CEEEEEcCCCEEEec
Q 031957 105 AVVMIG-SRQYIVFPGRFIYTQ 125 (150)
Q Consensus 105 AIVeiG-GKQYKVe~GdvI~Ve 125 (150)
..+.++ |+.|.+++||.+++.
T Consensus 101 l~l~l~~g~~~~L~~Gds~y~p 122 (266)
T 4e2q_A 101 VTLTNTSSSSKKLTVDSYAYLP 122 (266)
T ss_dssp EEEEC--CCCEEECTTEEEEEC
T ss_pred EEEEECCCcEEEEcCCCEEEEC
Confidence 457888 999999999999986
No 78
>1hf2_A MINC, septum site-determining protein MINC; cell division protein, FTSZ, bacterial cell division, beta helix; 2.2A {Thermotoga maritima} SCOP: b.80.3.1 c.102.1.1
Probab=31.08 E-value=49 Score=25.63 Aligned_cols=24 Identities=13% Similarity=0.155 Sum_probs=19.3
Q ss_pred CCEEEEEcCCCEEEecccCCCCCCCeEE
Q 031957 110 GSRQYIVFPGRFIYTQRLKGANVNDKVC 137 (150)
Q Consensus 110 GGKQYKVe~GdvI~VerLkgaEvGD~V~ 137 (150)
.|+|.... ||+|.+ .++++|.+|.
T Consensus 110 SGQ~I~~~-gdlvVl---GdVn~GAeVi 133 (210)
T 1hf2_A 110 SGQTVVHS-GDVIVF---GNVNKGAEIL 133 (210)
T ss_dssp TTEEEEES-SCEEES---SCBCTTCEEE
T ss_pred CCCEEEec-CCEEEE---ccCCCCCEEE
Confidence 56888777 999984 5678999988
No 79
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=30.48 E-value=20 Score=24.72 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=26.1
Q ss_pred eEEEEE-eCCEEEEEcCCCEEEecccCCCCCCCeEE
Q 031957 103 IFAVVM-IGSRQYIVFPGRFIYTQRLKGANVNDKVC 137 (150)
Q Consensus 103 MYAIVe-iGGKQYKVe~GdvI~VerLkgaEvGD~V~ 137 (150)
-.|||+ ..|..|.|.....|..+.| ++|+.|-
T Consensus 31 ~~~iVkss~g~~~~V~v~~~Vd~~~L---kpG~rVa 63 (85)
T 3h43_A 31 RKVVVKSSTGPSFLVNVSHFVNPDDL---APGKRVC 63 (85)
T ss_dssp TEEEEEETTSSEEEEEBCTTSCGGGC---CTTCEEE
T ss_pred CEEEEEeCCCCeEEEEecCccCHHHC---CCCCEEE
Confidence 468998 7789999999888876665 6899887
No 80
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=29.88 E-value=45 Score=26.45 Aligned_cols=22 Identities=18% Similarity=0.157 Sum_probs=17.1
Q ss_pred EEEEe---CC--EEEEEcCCCEEEecc
Q 031957 105 AVVMI---GS--RQYIVFPGRFIYTQR 126 (150)
Q Consensus 105 AIVei---GG--KQYKVe~GdvI~Ver 126 (150)
+.+.+ +| +.|.+++||+++|+.
T Consensus 84 ~~~~v~~~~g~~~~~~l~~GD~~~ip~ 110 (361)
T 2vqa_A 84 TRITLTSPEGKVEIADVDKGGLWYFPR 110 (361)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEECT
T ss_pred EEEEEEeCCCcEEEEEEcCCCEEEECC
Confidence 34555 66 679999999999874
No 81
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=29.40 E-value=22 Score=24.02 Aligned_cols=49 Identities=12% Similarity=0.003 Sum_probs=29.0
Q ss_pred CCceEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eeeccCCccee
Q 031957 100 REEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFCAFSPLQFL 148 (150)
Q Consensus 100 r~~MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~~~~~~~~~ 148 (150)
..-.|-|++.|.-.-++..||.+.|+..--...|..+. ++-.+.|.+|.
T Consensus 6 ~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~ 55 (113)
T 1yat_A 6 GNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCN 55 (113)
T ss_dssp GGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEE
T ss_pred CCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEE
Confidence 34567788776443348899999988653123566555 43333455543
No 82
>3bs1_A Accessory gene regulator protein A; lyttr, AGRA, response regulator, DNA binding domain; HET: DNA BRU; 1.60A {Staphylococcus aureus}
Probab=29.37 E-value=44 Score=21.84 Aligned_cols=24 Identities=13% Similarity=0.056 Sum_probs=21.1
Q ss_pred EEEEEeCCEEEEEcCCCEEEeccc
Q 031957 104 FAVVMIGSRQYIVFPGRFIYTQRL 127 (150)
Q Consensus 104 YAIVeiGGKQYKVe~GdvI~VerL 127 (150)
+=.|+.+|+.++|...|.+|++..
T Consensus 7 ~i~i~~~~~~~~i~~~dI~yie~~ 30 (103)
T 3bs1_A 7 TIELKRGSNSVYVQYDDIMFFESS 30 (103)
T ss_dssp EEEEEETTEEEEEEGGGEEEEEEC
T ss_pred EEEEEECCEEEEEehHHEEEEEec
Confidence 456889999999999999999865
No 83
>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=29.31 E-value=17 Score=24.05 Aligned_cols=20 Identities=20% Similarity=0.100 Sum_probs=15.0
Q ss_pred EEeCCE----EEEEcCCCEEEecc
Q 031957 107 VMIGSR----QYIVFPGRFIYTQR 126 (150)
Q Consensus 107 VeiGGK----QYKVe~GdvI~Ver 126 (150)
|.++|+ .|+|.+||.|.|..
T Consensus 28 V~VNg~~~~~~~~v~~gd~I~v~~ 51 (92)
T 2k6p_A 28 VWLNGSCAKASKEVKAGDTISLHY 51 (92)
T ss_dssp CEETTEECCTTCBCCTTCEEEECC
T ss_pred EEECCEEcCCCCCcCCCCEEEEEe
Confidence 556666 47899999998853
No 84
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=28.72 E-value=21 Score=23.76 Aligned_cols=45 Identities=11% Similarity=0.017 Sum_probs=24.2
Q ss_pred eEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eeeccCCcce
Q 031957 103 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFCAFSPLQF 147 (150)
Q Consensus 103 MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~~~~~~~~ 147 (150)
.|-|++-|.-.-+++.||++.|+..--...|..+. ++-.+.|.+|
T Consensus 3 ~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f 48 (107)
T 2ppn_A 3 QVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKF 48 (107)
T ss_dssp EEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEE
T ss_pred EEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEE
Confidence 45666665433347888888887542112455555 3322345444
No 85
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=28.54 E-value=14 Score=30.79 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=27.5
Q ss_pred CceEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE
Q 031957 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC 137 (150)
Q Consensus 101 ~~MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~ 137 (150)
.+.+|||+.+|+.|.|..-..|..+.| ++|+.|.
T Consensus 109 dd~~aiV~s~Gr~~~V~Vsp~Vd~e~L---kPG~rVa 142 (251)
T 3m9b_A 109 DDDTVDVFTSGRKMRLTCSPNIDAASL---KKGQTVR 142 (251)
T ss_dssp SSSCEEEECSSSCCEECBCTTSCTTTS---CSSCEEE
T ss_pred CCCEEEEEeCCceEEEEeCCCCCHHHC---CCCCEEE
Confidence 356899999999999998887776555 6888886
No 86
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=27.38 E-value=92 Score=21.87 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=26.1
Q ss_pred CCceEEEEEeCCEEEEEcCCCEEEecccCCCC-CCCeEE-eeeccCCccee
Q 031957 100 REEIFAVVMIGSRQYIVFPGRFIYTQRLKGAN-VNDKVC-NFCAFSPLQFL 148 (150)
Q Consensus 100 r~~MYAIVeiGGKQYKVe~GdvI~VerLkgaE-vGD~V~-~~~~~~~~~~~ 148 (150)
..-+|-|++.| .-.++..||++.|+..--.. .|..+. ++-.+.|.+|.
T Consensus 26 ~gl~~~vl~~G-~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~ 75 (134)
T 3b7x_A 26 RGVLKDVIREG-AGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMK 75 (134)
T ss_dssp SSEEEEEEECC-EEEECCTTCEEEEEEEEECTTCSSCSEEC-------CEE
T ss_pred CCEEEEEEEcC-CCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEE
Confidence 34466666654 66789999999998653222 365555 44334555553
No 87
>1e0g_A Membrane-bound lytic murein transglycosylase D; cell WALL, hydrolase, glycosidase, lipoprotein, outer membrane, multigene family; NMR {Escherichia coli} SCOP: d.7.1.1
Probab=26.98 E-value=16 Score=20.82 Aligned_cols=13 Identities=31% Similarity=0.237 Sum_probs=10.4
Q ss_pred CEEEEEcCCCEEE
Q 031957 111 SRQYIVFPGRFIY 123 (150)
Q Consensus 111 GKQYKVe~GdvI~ 123 (150)
.+.|+|.+||.+.
T Consensus 2 ~~~y~V~~GDtl~ 14 (48)
T 1e0g_A 2 SITYRVRKGDSLS 14 (48)
T ss_dssp CCEEEECTTCCHH
T ss_pred CEEEEEcCCCcHH
Confidence 4679999999765
No 88
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=26.82 E-value=62 Score=23.12 Aligned_cols=45 Identities=16% Similarity=0.122 Sum_probs=28.5
Q ss_pred eEEEEEeCCEEE-EEcCCCEEEecccCCCCCCCeEE-eeeccCCccee
Q 031957 103 IFAVVMIGSRQY-IVFPGRFIYTQRLKGANVNDKVC-NFCAFSPLQFL 148 (150)
Q Consensus 103 MYAIVeiGGKQY-KVe~GdvI~VerLkgaEvGD~V~-~~~~~~~~~~~ 148 (150)
+|-|++-| .-. +...||++.|++.--...|..+. ++-.+.|..|.
T Consensus 38 ~~~i~~~G-~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~ 84 (144)
T 3o5e_A 38 LKIVKRVG-NGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFS 84 (144)
T ss_dssp EEEEEECC-BSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEE
T ss_pred EEEEEECC-CCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEE
Confidence 55555544 454 78999999998753234566666 55456666654
No 89
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=26.46 E-value=44 Score=26.91 Aligned_cols=16 Identities=19% Similarity=0.231 Sum_probs=14.4
Q ss_pred CEEEEEcCCCEEEecc
Q 031957 111 SRQYIVFPGRFIYTQR 126 (150)
Q Consensus 111 GKQYKVe~GdvI~Ver 126 (150)
++.|.+.+||+++++.
T Consensus 300 ~~~~~l~~GD~~~ip~ 315 (385)
T 1j58_A 300 ARTFNYQAGDVGYVPF 315 (385)
T ss_dssp EEEEEEESSCEEEECT
T ss_pred EEEEEEcCCCEEEECC
Confidence 7899999999999874
No 90
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=26.23 E-value=44 Score=27.32 Aligned_cols=20 Identities=10% Similarity=0.114 Sum_probs=17.1
Q ss_pred EEEeCC-----EEEEEcCCCEEEec
Q 031957 106 VVMIGS-----RQYIVFPGRFIYTQ 125 (150)
Q Consensus 106 IVeiGG-----KQYKVe~GdvI~Ve 125 (150)
.+.++| +.|.+.+||.|+++
T Consensus 83 ~~~v~~~~g~~~~~~L~~GD~v~ip 107 (350)
T 1juh_A 83 QLWAQSGNETQQTRVLSSGDYGSVP 107 (350)
T ss_dssp EEEEEETTSCCEEEEEETTCEEEEC
T ss_pred EEEECCcCCceEEEEECCCCEEEEC
Confidence 345777 99999999999986
No 91
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=25.47 E-value=39 Score=25.77 Aligned_cols=39 Identities=23% Similarity=0.209 Sum_probs=25.3
Q ss_pred EEeC-CEEEEEcCCCEEEecccC---CCCCCCeEE-eeeccCCcc
Q 031957 107 VMIG-SRQYIVFPGRFIYTQRLK---GANVNDKVC-NFCAFSPLQ 146 (150)
Q Consensus 107 VeiG-GKQYKVe~GdvI~VerLk---gaEvGD~V~-~~~~~~~~~ 146 (150)
+.++ |+.|.+.+||.| +++-. -.|.|++-. ..+..+|.+
T Consensus 112 l~ld~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P~~ 155 (172)
T 3es1_A 112 LELDDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIEAP 155 (172)
T ss_dssp EECGGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEECC
T ss_pred EEECCCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcCCC
Confidence 5777 899999999999 76421 125666544 444444443
No 92
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=25.24 E-value=31 Score=25.93 Aligned_cols=47 Identities=6% Similarity=-0.001 Sum_probs=30.1
Q ss_pred CceEEEEEeCCEEEEEcCCCEEEecccCCCC-CCCeEE-eeeccCCccee
Q 031957 101 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGAN-VNDKVC-NFCAFSPLQFL 148 (150)
Q Consensus 101 ~~MYAIVeiGGKQYKVe~GdvI~VerLkgaE-vGD~V~-~~~~~~~~~~~ 148 (150)
.-.|-|++-|.- .++..||++.|++.--.. .|..+. ++-.+.|.+|.
T Consensus 50 gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~ 98 (180)
T 2f4e_A 50 KVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELV 98 (180)
T ss_dssp TEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEE
T ss_pred ceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEE
Confidence 447778777644 389999999998652112 366666 44445566554
No 93
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=24.51 E-value=68 Score=27.45 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=20.4
Q ss_pred eEEE------EEeCCEEEEEcCCCEEEec
Q 031957 103 IFAV------VMIGSRQYIVFPGRFIYTQ 125 (150)
Q Consensus 103 MYAI------VeiGGKQYKVe~GdvI~Ve 125 (150)
+|.| +.|||+.|.+++||++.|.
T Consensus 302 Vy~V~eG~G~~~I~~~~~~w~~gD~fvvP 330 (368)
T 3nw4_A 302 VFQVFEGAGAVVMNGETTKLEKGDMFVVP 330 (368)
T ss_dssp EEEEEESCEEEEETTEEEEECTTCEEEEC
T ss_pred EEEEEeCcEEEEECCEEEEecCCCEEEEC
Confidence 6666 5899999999999999997
No 94
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=23.40 E-value=56 Score=22.73 Aligned_cols=49 Identities=14% Similarity=0.138 Sum_probs=30.8
Q ss_pred CCCceEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eeeccCCccee
Q 031957 99 KREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFCAFSPLQFL 148 (150)
Q Consensus 99 ~r~~MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~~~~~~~~~ 148 (150)
+..-.|-+++.|.- -++..||.+.|+..--...|..+. ++-.+.|..|.
T Consensus 11 ~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~ 60 (129)
T 1u79_A 11 PSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFR 60 (129)
T ss_dssp TTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEE
T ss_pred CCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEE
Confidence 34557777777643 469999999998653223566666 44334565553
No 95
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=22.75 E-value=83 Score=25.31 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=24.5
Q ss_pred EEEeCCEEEEEcCCCEEEecccCC--CCCCCeEE-eeec
Q 031957 106 VVMIGSRQYIVFPGRFIYTQRLKG--ANVNDKVC-NFCA 141 (150)
Q Consensus 106 IVeiGGKQYKVe~GdvI~VerLkg--aEvGD~V~-~~~~ 141 (150)
.|..+|+.+.+.+||.++|.+=.. -++-+.+. .||.
T Consensus 77 ~lt~~g~~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~ 115 (238)
T 3myx_A 77 TLTSGTDSVTLSTGESAVIGRGTQVRIDAQPESLWAFCA 115 (238)
T ss_dssp EEEETTEEEEEETTCEEEECTTCCEEEEECTTEEEEEEE
T ss_pred EEECCCeEEEEcCCCEEEECCCCEEEEEecCCeEEEEEe
Confidence 345799999999999999875210 12345555 6664
No 96
>1x4r_A PARP14 protein; WWE domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=22.43 E-value=1.1e+02 Score=22.14 Aligned_cols=24 Identities=33% Similarity=0.391 Sum_probs=19.9
Q ss_pred EEEEeCCEEEEEcC---------CCEEEecccC
Q 031957 105 AVVMIGSRQYIVFP---------GRFIYTQRLK 128 (150)
Q Consensus 105 AIVeiGGKQYKVe~---------GdvI~VerLk 128 (150)
+-|+|+|+.|.|.- |..|.|.|+.
T Consensus 59 v~VkI~~~~y~Vdl~t~~A~~~~G~~~~v~R~~ 91 (99)
T 1x4r_A 59 TVVQIHNQDFTVDLSTNTATAPQGQTFTVQRLV 91 (99)
T ss_dssp EEEEETTEEEEEETTTTEEECTTSCEEEEEEEC
T ss_pred eEEEECCEEEEEEcCcceeecCCCCEEEEEEec
Confidence 56999999999975 7888888875
No 97
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=22.42 E-value=28 Score=24.68 Aligned_cols=49 Identities=8% Similarity=-0.089 Sum_probs=30.0
Q ss_pred CCceEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eeeccCCccee
Q 031957 100 REEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFCAFSPLQFL 148 (150)
Q Consensus 100 r~~MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~~~~~~~~~ 148 (150)
..-.|-|++.|.-.-++..||.+.|++.--...|..+. ++-.+.|.+|.
T Consensus 14 ~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~ 63 (135)
T 1r9h_A 14 GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFN 63 (135)
T ss_dssp SSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEE
T ss_pred CcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEE
Confidence 34477777766443368999999998653223566555 44334565554
No 98
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=22.27 E-value=41 Score=23.39 Aligned_cols=47 Identities=15% Similarity=0.120 Sum_probs=28.7
Q ss_pred ceEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eeeccCCccee
Q 031957 102 EIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFCAFSPLQFL 148 (150)
Q Consensus 102 ~MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~~~~~~~~~ 148 (150)
-+|.|++.|.-.-+...||.+.|+..--...|..+. ++-.+.|.+|.
T Consensus 21 v~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~ 68 (128)
T 3o5q_A 21 VLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFS 68 (128)
T ss_dssp EEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEE
T ss_pred EEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEE
Confidence 366666665443367899999998653233566555 44345666554
No 99
>3d6w_A Methyl-accepting/DNA response regulator; structural genomics, APC7590, lyttr DNA-binding domain, METH accepting/DNA response regulator, PSI-2; 2.40A {Bacillus cereus}
Probab=22.19 E-value=47 Score=22.01 Aligned_cols=24 Identities=8% Similarity=-0.006 Sum_probs=20.6
Q ss_pred EEEEEeCCEEEEEcCCCEEEeccc
Q 031957 104 FAVVMIGSRQYIVFPGRFIYTQRL 127 (150)
Q Consensus 104 YAIVeiGGKQYKVe~GdvI~VerL 127 (150)
+=.|+.+|+.++|...|.+|++..
T Consensus 4 ~i~v~~~~~~~~i~~~dI~yie~~ 27 (111)
T 3d6w_A 4 VVTLKTTDGWIPVPFSKVMYLEAK 27 (111)
T ss_dssp EEEEECSSSEEEEEGGGEEEEEEE
T ss_pred EEEEEECCEEEEEehHHEEEEEEe
Confidence 346789999999999999999865
No 100
>1kca_A Repressor protein CI; gene regulation, DNA-binding, lambda repressor, protein oligomerization, DNA-looping; 2.91A {Enterobacteria phage lambda} SCOP: b.87.1.1
Probab=22.12 E-value=58 Score=22.20 Aligned_cols=23 Identities=13% Similarity=0.057 Sum_probs=15.1
Q ss_pred EEcCCCEEEecccCCCCCCCeEE
Q 031957 115 IVFPGRFIYTQRLKGANVNDKVC 137 (150)
Q Consensus 115 KVe~GdvI~VerLkgaEvGD~V~ 137 (150)
....||+|.|++....+.||-|.
T Consensus 32 ~i~~Gd~v~Vd~~~~~~~Gdivv 54 (109)
T 1kca_A 32 SFPDGMLILVDPEQAVEPGDFCI 54 (109)
T ss_dssp CCCTTCEEEEETTSCCCTTCEEE
T ss_pred eeCCCCEEEEecCCcCCCCCEEE
Confidence 56777777777665556666444
No 101
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=22.10 E-value=73 Score=27.24 Aligned_cols=40 Identities=13% Similarity=0.013 Sum_probs=26.0
Q ss_pred EEEeCCEEEEEcCCCEEEecccC---CCCCCCeEE--eeeccCCc
Q 031957 106 VVMIGSRQYIVFPGRFIYTQRLK---GANVNDKVC--NFCAFSPL 145 (150)
Q Consensus 106 IVeiGGKQYKVe~GdvI~VerLk---gaEvGD~V~--~~~~~~~~ 145 (150)
++.++|+.+.+++||+|++..-. ..+.||+-. .-++..|+
T Consensus 136 ~~~vdG~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~v~D~Pl 180 (368)
T 3nw4_A 136 WTVVNGDPVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDGLDIPF 180 (368)
T ss_dssp EEEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEECHHH
T ss_pred EEEECCEEEEEeCCCEEEECCCCcEEeEeCCCCCeEEEEecchHH
Confidence 35679999999999999996321 124565543 22454454
No 102
>4g4k_A Accessory gene regulator protein A; AGRA, response regulator, activator, transcription factor, phosphoprotein, transcription regulation; 1.52A {Staphylococcus aureus} PDB: 3bs1_A
Probab=21.86 E-value=60 Score=21.41 Aligned_cols=24 Identities=13% Similarity=0.056 Sum_probs=21.1
Q ss_pred EEEEEeCCEEEEEcCCCEEEeccc
Q 031957 104 FAVVMIGSRQYIVFPGRFIYTQRL 127 (150)
Q Consensus 104 YAIVeiGGKQYKVe~GdvI~VerL 127 (150)
+=.|+.+|+.++|...|.+|++..
T Consensus 7 ~i~i~~~~~~~~i~~~dI~yie~~ 30 (103)
T 4g4k_A 7 TIELKRGSNSVYVQYDDIMFFESS 30 (103)
T ss_dssp EEEEECSSSEEEEEGGGEEEEECC
T ss_pred EEEEEECCEEEEEehHHEEEEEec
Confidence 457899999999999999999765
No 103
>3hz2_A M-crystallin, beta/GAMA crystallin family protein; calcium-bound betagamma-crystallin, metal binding protein; 1.86A {Methanosarcina acetivorans} PDB: 2k1w_A 2k1x_A
Probab=21.42 E-value=26 Score=23.60 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=14.3
Q ss_pred EeCCEEEEEcCCCEEEeccc
Q 031957 108 MIGSRQYIVFPGRFIYTQRL 127 (150)
Q Consensus 108 eiGGKQYKVe~GdvI~VerL 127 (150)
...|+||.+++|++-.-...
T Consensus 52 ~y~G~qy~Le~GeY~~~~~w 71 (84)
T 3hz2_A 52 NYGGRYWDLGPGEYSSVESA 71 (84)
T ss_dssp TTEEEEEEECSEEESSGGGG
T ss_pred CCeeEEEEECCcccCCHHHh
Confidence 34499999999986544443
No 104
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=21.12 E-value=68 Score=25.77 Aligned_cols=21 Identities=29% Similarity=0.156 Sum_probs=16.7
Q ss_pred EEEe---CCE--EEEEcCCCEEEecc
Q 031957 106 VVMI---GSR--QYIVFPGRFIYTQR 126 (150)
Q Consensus 106 IVei---GGK--QYKVe~GdvI~Ver 126 (150)
.|.+ +|+ .|.+++||+++++.
T Consensus 111 ~~~~~~~~g~~~~~~l~~GD~~~ip~ 136 (385)
T 1j58_A 111 RVTIVDEKGRSFIDDVGEGDLWYFPS 136 (385)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEECT
T ss_pred EEEEEeCCCcEEEEEeCCCCEEEECC
Confidence 3556 788 56999999999874
No 105
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=20.98 E-value=78 Score=26.83 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=19.9
Q ss_pred EEEEEeCCEEEEEcCCCEEEec
Q 031957 104 FAVVMIGSRQYIVFPGRFIYTQ 125 (150)
Q Consensus 104 YAIVeiGGKQYKVe~GdvI~Ve 125 (150)
-.+|.++|+.|.+..||.|.|.
T Consensus 236 ss~Vt~~~q~~~L~~~DsLLIp 257 (286)
T 2qnk_A 236 SSVVTMGGRRLSLAPDDSLLVL 257 (286)
T ss_dssp CEEEEETTEEEEECTTEEEEEC
T ss_pred ceEEEECCeEEeccCCCEEEec
Confidence 3579999999999999999986
No 106
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=20.97 E-value=53 Score=25.67 Aligned_cols=20 Identities=10% Similarity=0.039 Sum_probs=14.4
Q ss_pred EEeCC---EE--EEEcCCCEEEecc
Q 031957 107 VMIGS---RQ--YIVFPGRFIYTQR 126 (150)
Q Consensus 107 VeiGG---KQ--YKVe~GdvI~Ver 126 (150)
+.++| +. +.|++||+|.|..
T Consensus 117 f~i~d~~d~~~~i~v~~GDlIiIPa 141 (191)
T 1vr3_A 117 FDVRDKEDKWIRISMEKGDMITLPA 141 (191)
T ss_dssp EEEECTTSCEEEEEEETTEEEEECT
T ss_pred EEECCCCCeEEEEEECCCCEEEECc
Confidence 45554 34 4889999999864
No 107
>2wkd_A ORF34P2; SSB, single-stranded DNA binding, DNA binding protein; 2.10A {Lactococcus phage P2} PDB: 2wkc_A
Probab=20.73 E-value=19 Score=27.27 Aligned_cols=35 Identities=14% Similarity=0.272 Sum_probs=21.1
Q ss_pred eEEEEEeCCEEEEEcCCCEEEe-cccCCCCCCCeEE-eee
Q 031957 103 IFAVVMIGSRQYIVFPGRFIYT-QRLKGANVNDKVC-NFC 140 (150)
Q Consensus 103 MYAIVeiGGKQYKVe~GdvI~V-erLkgaEvGD~V~-~~~ 140 (150)
.|+=+-+. ++|+.||.+.| +|++.-+.||.+. |+.
T Consensus 44 ~ygsaf~p---d~v~~GDivTvsgri~~ke~G~y~nyNf~ 80 (119)
T 2wkd_A 44 AYGSAFMP---DFIQMGDTVTVSGRVQAKESGEYVNYNFV 80 (119)
T ss_dssp CEEEEECC---TTCCTTCEEEEEEEEEEC------CEEEE
T ss_pred EEEEEecc---ccccCCcEEEEeceeeeeccCceEeeeee
Confidence 46666655 57999999986 6887556898887 654
No 108
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=20.70 E-value=63 Score=22.91 Aligned_cols=48 Identities=13% Similarity=0.018 Sum_probs=28.0
Q ss_pred CCceEEEEEeCCEEEEEcCCCEEEecccCCCCCCCeEE-eeeccCCccee
Q 031957 100 REEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKVC-NFCAFSPLQFL 148 (150)
Q Consensus 100 r~~MYAIVeiGGKQYKVe~GdvI~VerLkgaEvGD~V~-~~~~~~~~~~~ 148 (150)
..-.|-+++.|. --+++.||++.|++.--...|..+. ++-.+.|.+|.
T Consensus 28 ~gl~~~~l~~G~-G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~ 76 (133)
T 2y78_A 28 SGLKYEDLTEGS-GAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFV 76 (133)
T ss_dssp TSCEEEEEECCS-SCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEE
T ss_pred CCEEEEEEEcCC-CCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEE
Confidence 445677777664 3478899999888652123455555 33234455443
Done!