BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031963
(150 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2
Length = 170
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 3/111 (2%)
Query: 32 TFYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSRLIKEGT---TNVAARI 88
TF+WG EVLFSGWPG +GMYAL LIFVF L V+ EWL HS L++ T N AA +
Sbjct: 45 TFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGL 104
Query: 89 IRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFGSMVFDKTE 139
I+T ++ +R+ L YL+ML++MSFNAG+FL A+AG A+GF+LFGS F T
Sbjct: 105 IQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTS 155
>sp|Q8GWP3|COPT6_ARATH Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1
Length = 145
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 92/141 (65%), Gaps = 6/141 (4%)
Query: 10 PPTKNGTGEMMMHLHKKM-KMHMTFYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIA 68
PP+ + M+ H + M MHMTF+WG E+LFSGWPG GMY L LI VF L VI
Sbjct: 7 PPSSPSS--MVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIV 64
Query: 69 EWLTHSRLIK-EGTTNVAARIIRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGF 127
EWL HS +++ G+T+ A +++T ++ ++ L YL+ML++MSFN G+F+ A+AG A+GF
Sbjct: 65 EWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGF 124
Query: 128 LLFGSMVFDKTEFPPYEKPSE 148
+LFGS F EKP E
Sbjct: 125 MLFGSTAFKNPS--DDEKPFE 143
>sp|Q9STG2|COPT2_ARATH Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1
Length = 158
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 5/123 (4%)
Query: 33 FYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSRLIK-EGTTNVAARIIRT 91
F+WG EVLFSGWPG +GMYAL LI +F L VIAEWL HS +++ G+TN AA + +T
Sbjct: 34 FFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQT 93
Query: 92 ILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFGSMVF----DKTEFPPYEKPS 147
++ ++ L YL+ML++MSFNAG+F+ A+AG +GF LFGS F D + PS
Sbjct: 94 AVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQKTAELLPPS 153
Query: 148 ESC 150
C
Sbjct: 154 SGC 156
>sp|Q8SAA5|COPT4_ARATH Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2
Length = 145
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 24 HKKMKMHMTFYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWL---THSRLIKEG 80
H+ +H TFYWG +VLFSGWPG GMYALALIFVF L +AEWL + + IK+G
Sbjct: 25 HRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQG 84
Query: 81 TTNVAARIIRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFGSMVFDKTE 139
+A RT ++ ++ YL++L+++SFN G+FLAA+ G ALGF +F F +
Sbjct: 85 ADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRNRD 143
>sp|Q94EE4|COPT1_ORYSJ Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2
SV=1
Length = 161
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Query: 10 PPTKNGTGEMMMHLHKKMK-MHMTFYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIA 68
PP + M K M+ HMTF+WG +EVLF+ WPG R GMYALALIFVF L VI
Sbjct: 13 PPAAGAAAQGGMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIV 72
Query: 69 EWLTHSR-----LIKEGTTNVAARIIRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQ 123
E+L R A + R +H +RV + YLLML+LMSFN G+FL AVAG
Sbjct: 73 EFLGSRRADACLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAGH 132
Query: 124 ALGFLLF 130
A GFL F
Sbjct: 133 AAGFLAF 139
>sp|Q9FGU8|COPT3_ARATH Copper transporter 3 OS=Arabidopsis thaliana GN=COPT3 PE=2 SV=1
Length = 151
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Query: 22 HLHKKMKMHMTFYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSRLIKEGT 81
H H M MHMTF+WG EVLF GWPG MY + L +F + +E L+ +K G
Sbjct: 24 HRHGGM-MHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGP 82
Query: 82 TNVAARIIRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFGSMVFDKTEFP 141
++ +++T ++ +R +L YL+ML++MSFN G+F+AA+AG LGF++FGS F T
Sbjct: 83 ASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSN 142
Query: 142 PYEKPSESC 150
+ + C
Sbjct: 143 SHTEVQSHC 151
>sp|Q60EN8|COPT2_ORYSJ Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1
SV=1
Length = 151
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 3/130 (2%)
Query: 23 LHKKMKMHMTFYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSRL---IKE 79
+ K MHMTF+WG EVLF+ WPG R GMYALA++F+F L V+ E+ + L +
Sbjct: 17 VKKARYMHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEFRGYRVLEARLAR 76
Query: 80 GTTNVAARIIRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFGSMVFDKTE 139
AA +RT +HA+RV + YL+ML+LMSFN G+FLA VAG A GFL F + +
Sbjct: 77 RRAPRAAAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGLCGGGP 136
Query: 140 FPPYEKPSES 149
PP E+ ++
Sbjct: 137 APPLEEDRKN 146
>sp|Q7XTF8|COPT6_ORYSJ Copper transporter 6 OS=Oryza sativa subsp. japonica GN=COPT6 PE=2
SV=1
Length = 184
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 76/127 (59%), Gaps = 16/127 (12%)
Query: 24 HK-KMKMHMTFYWGNEAEVLFSGWPGKR-AGMYALALIFVFTLGVIAEWLT--HSRLIKE 79
HK M MHMTF+W + A VL GWPG+R AGMYAL L+FV L + E L+ RL +
Sbjct: 32 HKMAMMMHMTFFWSDRAVVLIRGWPGERGAGMYALCLLFVLALAALTEGLSVLSRRLARR 91
Query: 80 GTTNVAARIIR------------TILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGF 127
G ++ R T +HA R+ + YL+ML++MSFN G+ LAAVAG ALGF
Sbjct: 92 GGGAASSDGGRPAPAPASSAALLTAVHAARMGMAYLVMLAVMSFNVGVLLAAVAGHALGF 151
Query: 128 LLFGSMV 134
LL S V
Sbjct: 152 LLARSRV 158
>sp|Q93VM8|COPT5_ARATH Copper transporter 5 OS=Arabidopsis thaliana GN=COPT5 PE=2 SV=1
Length = 146
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 25/129 (19%)
Query: 29 MHMTFYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSR------------- 75
MHMTFYWG +A +LF W Y L LI F ++L + R
Sbjct: 2 MHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRAP 61
Query: 76 ------------LIKEGTTNVAARIIRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQ 123
LI + T AA+ +L + ++GYLLML+ MSFN G+F+A V G
Sbjct: 62 PPPRSSSGVSAPLIPKSGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVVGL 121
Query: 124 ALGFLLFGS 132
G+ +F S
Sbjct: 122 TAGYAVFRS 130
>sp|Q10KT6|COPT4_ORYSJ Copper transporter 4 OS=Oryza sativa subsp. japonica GN=COPT4 PE=2
SV=1
Length = 183
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 19 MMMHLHKKMKMHMTFYWGNEAEVLFSGWPGKRAGM---YALALIFVFTLGVIAEWLTHSR 75
MM + M M+F WG+ A VLF WPG RAG+ + L+ + + SR
Sbjct: 22 MMPGMAMPMTTGMSFTWGHRAVVLFPRWPGDRAGVGMYFLCLLLVLALAALAEALSAASR 81
Query: 76 LIK---------EGTTNVAARIIRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALG 126
+ +++ +HA R+ L YL+ML++MSFNAG+ LAAVAG A G
Sbjct: 82 RLDLDLDLSRSRGRRRRRRQQLLAAGVHAARMGLAYLVMLAVMSFNAGVLLAAVAGHAAG 141
Query: 127 FLLFGSMVFDKTEFPP 142
FLL S + P
Sbjct: 142 FLLARSGLLGSRAAAP 157
>sp|Q5ZD08|COPT3_ORYSJ Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2
SV=1
Length = 150
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 7/125 (5%)
Query: 24 HKKMKMHMTFYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSRLIKEGTTN 83
+K MHMTFYWG +E+LF+GWPG GMYALAL VF L V+ E+L R ++E ++
Sbjct: 23 RRKRYMHMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEFLGSPR-VQESSSL 81
Query: 84 VAARIIRTILHAIRVSLG--YLLMLSLMSFNAGIFLAAVAGQALGFLLFGSMV----FDK 137
+ R T V +G YLLML+LMSFN G+ LAAVAG A GFL F + + + K
Sbjct: 82 GSRRRRATAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAGHAAGFLAFRAGLCGGGYKK 141
Query: 138 TEFPP 142
E P
Sbjct: 142 GELAP 146
>sp|Q8WNR0|COPT1_PIG High affinity copper uptake protein 1 OS=Sus scrofa GN=SLC31A1 PE=2
SV=1
Length = 189
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 44/176 (25%)
Query: 1 MNDSHMLDPP---PTKNGTGEMMMHLHKKMKMHMTFYWG-NEAEVLFSGWPGKRAGMYAL 56
MN S + P PT +G+ H+ M M MTFY+G + EVLF+G AG A
Sbjct: 18 MNHSTTMPPSHHHPTSSGS-------HESMMMPMTFYFGFKKVEVLFAGLVINTAGEMAG 70
Query: 57 ALIFVFTLGVIAEWLTHSR--LIKEGTTNVA----------------------------A 86
A + VF L + E L +R L+++ ++
Sbjct: 71 AFVAVFLLAMFYEGLKIAREGLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFP 130
Query: 87 RIIRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFG---SMVFDKTE 139
+++T+LH I+V + Y LML M++N + +A AG G+ LF ++V D TE
Sbjct: 131 HLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVVDITE 186
>sp|Q5RAS6|COPT1_PONAB High affinity copper uptake protein 1 OS=Pongo abelii GN=SLC31A1
PE=2 SV=1
Length = 190
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 34/147 (23%)
Query: 27 MKMHMTFYWG-NEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSR--LIKEGTTN 83
M M MTFY+G E+LFSG AG A A + VF L + E L +R L+++ +
Sbjct: 41 MMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVS 100
Query: 84 VA----------------------------ARIIRTILHAIRVSLGYLLMLSLMSFNAGI 115
+ +++T+LH I+V + Y LML M++N +
Sbjct: 101 IRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYL 160
Query: 116 FLAAVAGQALGFLLFG---SMVFDKTE 139
+A AG G+ LF ++V D TE
Sbjct: 161 CIAVAAGAGTGYFLFSWKKAVVVDITE 187
>sp|O15431|COPT1_HUMAN High affinity copper uptake protein 1 OS=Homo sapiens GN=SLC31A1
PE=1 SV=1
Length = 190
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 34/147 (23%)
Query: 27 MKMHMTFYWG-NEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSR--LIKEGTTN 83
M M MTFY+G E+LFSG AG A A + VF L + E L +R L+++ +
Sbjct: 41 MMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVS 100
Query: 84 VA----------------------------ARIIRTILHAIRVSLGYLLMLSLMSFNAGI 115
+ +++T+LH I+V + Y LML M++N +
Sbjct: 101 IRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYL 160
Query: 116 FLAAVAGQALGFLLFG---SMVFDKTE 139
+A AG G+ LF ++V D TE
Sbjct: 161 CIAVAAGAGTGYFLFSWKKAVVVDITE 187
>sp|Q9JK41|COPT1_RAT High affinity copper uptake protein 1 OS=Rattus norvegicus
GN=Slc31a1 PE=2 SV=1
Length = 187
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 43/174 (24%)
Query: 3 DSHMLDPP---PTKNGTGEMMMHLHKKMKMHMTFYWG-NEAEVLFSGWPGKRAGMYALAL 58
D ++ PP PT + + H H+ M M MTFY+G ++LFS G A A
Sbjct: 17 DDNITMPPHQHPTTSAS-----HSHEMM-MPMTFYFGFKNVDLLFSSLVINTPGEMAGAF 70
Query: 59 IFVFTLGVIAEWLTHSR--LIKEGTTNVA----------------------------ARI 88
+ VF L + E L +R L+++ ++ +
Sbjct: 71 VAVFLLAMFYEGLKIAREGLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHL 130
Query: 89 IRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFG---SMVFDKTE 139
++T+LH I+V + Y LML M++N + +A AG G+ LF ++V D TE
Sbjct: 131 LQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVVDITE 184
>sp|Q7YXD4|P80_DICDI Protein P80 OS=Dictyostelium discoideum GN=p80 PE=2 SV=1
Length = 530
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 88 IIRTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFG 131
IIR LHAI ++ Y LML M+FN +F A +AG +G +LFG
Sbjct: 474 IIRGCLHAIELTCSYALMLVAMTFNVALFFAVIAGVLVGNILFG 517
>sp|Q8K211|COPT1_MOUSE High affinity copper uptake protein 1 OS=Mus musculus GN=Slc31a1
PE=2 SV=1
Length = 196
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 34/147 (23%)
Query: 27 MKMHMTFYWG-NEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSR--LIKEGTTN 83
M M MTFY+ +LFSG G A A + VF L + E L +R L+++ +
Sbjct: 47 MMMPMTFYFDFKNVNLLFSGLVINTPGEMAGAFVAVFLLAMFYEGLKIAREGLLRKSQVS 106
Query: 84 VA----------------------------ARIIRTILHAIRVSLGYLLMLSLMSFNAGI 115
+ +++T+LH I+V + Y LML M++N +
Sbjct: 107 IRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYL 166
Query: 116 FLAAVAGQALGFLLFG---SMVFDKTE 139
+A AG G+ LF ++V D TE
Sbjct: 167 CIAVAAGAGTGYFLFSWKKAVVVDITE 193
>sp|O15432|COPT2_HUMAN Probable low affinity copper uptake protein 2 OS=Homo sapiens
GN=SLC31A2 PE=1 SV=1
Length = 143
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 90 RTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLL 129
++++H I+V +GY +ML++MS+N IFL V G A+G+ L
Sbjct: 96 QSLIHVIQVVIGYFIMLAVMSYNTWIFLGVVLGSAVGYYL 135
>sp|Q9CPU9|COPT2_MOUSE Probable low affinity copper uptake protein 2 OS=Mus musculus
GN=Slc31a2 PE=1 SV=1
Length = 143
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 90 RTILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLL 129
++++H I+V +GY +ML++MS+N IFL V G A+G+ L
Sbjct: 96 QSLVHVIQVVIGYFVMLAVMSYNTWIFLGVVLGSAVGYYL 135
>sp|Q6Z0Q9|COP52_ORYSJ Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica
GN=COPT5.2 PE=3 SV=1
Length = 176
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 100 LGYLLMLSLMSFNAGIFLAAVAGQALGFLLF 130
+GYLLML++MSFN G+FLA VAG A G L F
Sbjct: 123 VGYLLMLAVMSFNGGVFLAVVAGLAAGHLAF 153
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 5/25 (20%)
Query: 29 MHMTFYWGNEAEVLF-----SGWPG 48
MHM+FYWG +LF SGWPG
Sbjct: 2 MHMSFYWGTSVTILFDGWRTSGWPG 26
>sp|Q69P80|COP51_ORYSJ Copper transporter 5.1 OS=Oryza sativa subsp. japonica GN=COPT5.1
PE=2 SV=1
Length = 149
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 29 MHMTFYWGNEAEVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSRLIKE--------- 79
MHMTFYWG + +LF GW Y L+L+ + ++L R+ +
Sbjct: 2 MHMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPAS 61
Query: 80 ----GTTNVA---------------ARIIRTILHAIRVSLGYLLMLSLMSFN 112
+++ A AR+ L + LGYLLML++MSFN
Sbjct: 62 IPPPASSDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFN 113
>sp|Q9USV7|CTR6_SCHPO Copper transport protein ctr6 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ctr6 PE=1 SV=1
Length = 148
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 73 HSRLIKEGTTNVAARIIR-TILHAIRVSLGYLLMLSLMSFNAGIFLAAVAGQALGF 127
HS+ +K G R R L+A+++ Y LML M++NA + LA G A G+
Sbjct: 84 HSKSLKSG------RPFRLCALYAVQLVFSYFLMLVAMTYNAYVILAIAIGAAFGY 133
>sp|Q9MAH4|AB10G_ARATH ABC transporter G family member 10 OS=Arabidopsis thaliana
GN=ABCG10 PE=3 SV=1
Length = 590
Score = 30.4 bits (67), Expect = 4.5, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 38 EAEVLFSGWPGKRAGMYALALIFVF--TLGVIAEWLTHSRLIKEGTTNVAARIIRTILHA 95
EA+VL R G +A L F+ T + +L R++ T+ A R++ +L
Sbjct: 379 EAKVL-------RTGFFAFILTFLLSSTTEGLPIFLQDRRILMRETSRRAYRVLSYVLAD 431
Query: 96 IRVSLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFGSMVF 135
+ + +LL++S++ +L + + GFL F +++
Sbjct: 432 TLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIW 471
>sp|Q54SD5|PEM2_DICDI Putative phosphatidylethanolamine N-methyltransferase
OS=Dictyostelium discoideum GN=pem2 PE=3 SV=1
Length = 213
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 48 GKRAGMYALALIFVFTLGVIAEWLTHSRLIKEGTTNVAARIIRTILHAIRVSLGYLLMLS 107
K G Y LA + +F+LG++ +WL LI++ R +L I G +L+L+
Sbjct: 57 SKENGCYLLAFL-IFSLGILRDWLFSEALIRQPIFQEFDRFEVEVLSYILYGFGGILVLA 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,321,160
Number of Sequences: 539616
Number of extensions: 2032300
Number of successful extensions: 5551
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 5503
Number of HSP's gapped (non-prelim): 37
length of query: 150
length of database: 191,569,459
effective HSP length: 107
effective length of query: 43
effective length of database: 133,830,547
effective search space: 5754713521
effective search space used: 5754713521
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)