BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031969
(150 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96GG9|DCNL1_HUMAN DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1
Length = 259
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 96/150 (64%), Gaps = 7/150 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M+KL S +DK++QF+ T +SEK A+ L +DW L+ A D F+ P+ K
Sbjct: 1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LYNRYKDP + I +DGI C+DL +DP I +L+++W +AAT CEFSKQ
Sbjct: 61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
EF+ G+ LG DS++K + +I M ELK+
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKE 150
>sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3
Length = 259
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
MHKL + +DK++QF++ T ASE+ A+ L ++W L+ A D F+ P++ KS
Sbjct: 1 MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LY+RYKDP + I +DGI C+DL +DP I +LV++W +AAT CEFSK+
Sbjct: 61 DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
EF+ G+ LG DS ++ + + + ELKD
Sbjct: 121 EFVDGMTELGCDSTERLKALLPRLEQELKD 150
>sp|Q5ZKU1|DCNL1_CHICK DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1
Length = 259
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 95/150 (63%), Gaps = 7/150 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M+KL S +DK++QF+ T +SEK A+ L +DW L+ A D F+ P+ K
Sbjct: 1 MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LYNRYKDP + I +DGI C+DL +DP I +L+++W +AAT CEFSK
Sbjct: 61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
EF+ G+ LG DS++K + +I M ELK+
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKE 150
>sp|Q9QZ73|DCNL1_MOUSE DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1
Length = 259
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 95/150 (63%), Gaps = 7/150 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M+KL S +DK++QF+ T +SEK A+ L +DW L+ A D F+ P+ K
Sbjct: 1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE+LY RYKDP + I +DGI C+DL +DP I +L+++W +AAT CEFSKQ
Sbjct: 61 DRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
EF+ G+ LG DS++K + +I M ELK+
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKE 150
>sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=1 SV=1
Length = 259
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
MHKL S +DK++QF++ T A E+ A+ L ++W L+ A D F+ P S ++
Sbjct: 1 MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAV 60
Query: 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
D + LE LY RYKDP + I VDGI C+DL +DP I +LV++W +AAT CEFS++
Sbjct: 61 DKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRK 120
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKD 143
EF+ G+ LG DS++K + + + ELKD
Sbjct: 121 EFLDGMTELGCDSMEKLKALLPRLEQELKD 150
>sp|Q9VUQ8|DCN1L_DROME DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2
Length = 288
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 1 MHKL-SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT-DTRH 58
M+KL S ++RDK+++F+S+T E+ A+ L+ +DW E A D ++ P+ D +
Sbjct: 1 MNKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKR 60
Query: 59 LEELYNRYKDPYLDM-ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIG 117
+E+L+ RY+DP + I G+ DL + P ++L+++W A CEFS+ EFI
Sbjct: 61 IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFIN 120
Query: 118 GLQSLGIDSLDKFRERISFMRAELKD 143
G+ LGIDS+DK + ++ + EL D
Sbjct: 121 GMCDLGIDSIDKLKTKLPILEQELND 146
>sp|A4IHK8|DCNL3_XENTR DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1d3 PE=2 SV=1
Length = 303
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 2 HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLE-------GAFDVFYSQPQSKSL 53
HK S S++D + +SI G AS + + K D LE G Q L
Sbjct: 28 HKRSSSHKD---EHLSICGKASREILVNGTKKGDVSLEASQPLAAGGDTKKKEQGTGAEL 84
Query: 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
+ + +EEL+ RYKD D IL +G+ CNDL VDP + +LV++W +AATMC+F+++
Sbjct: 85 SSVQRIEELFWRYKDEREDAILEEGMERFCNDLYVDPTEFRVLVLAWKFQAATMCKFTRR 144
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDE 144
EF G +++ D ++ R + E K E
Sbjct: 145 EFFEGCKAINADGIEGICARFPSLLNEAKQE 175
>sp|Q4V8B2|DCNL3_RAT DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1
Length = 304
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDE 144
G +++ DS+D R + E K E
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQE 176
>sp|Q5E9V1|DCNL3_BOVIN DCN1-like protein 3 OS=Bos taurus GN=DCUN1D3 PE=2 SV=1
Length = 304
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 47 QPQSKSLTDT-RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA 105
+P+S + + + LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AA
Sbjct: 78 EPKSNAEESSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAA 137
Query: 106 TMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDE 144
TMC+F+++EF G +++ DS+D R + E K E
Sbjct: 138 TMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQE 176
>sp|Q8K0V2|DCNL3_MOUSE DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=2 SV=1
Length = 304
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDE 144
G +++ DS+D R + E K E
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQE 176
>sp|Q8IWE4|DCNL3_HUMAN DCN1-like protein 3 OS=Homo sapiens GN=DCUN1D3 PE=1 SV=1
Length = 304
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDE 144
G +++ DS+D R + E K E
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQE 176
>sp|Q5R9G1|DCNL3_PONAB DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=2 SV=1
Length = 304
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
+ LEEL+ RYKD D IL +G+ CNDL VDP + +L+++W +AATMC+F+++EF
Sbjct: 89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDE 144
G +++ DS+D R + E K E
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQE 176
>sp|Q9U3C8|DCN1_CAEEL Defective in cullin neddylation protein 1 OS=Caenorhabditis elegans
GN=dcn-1 PE=1 SV=2
Length = 295
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
M++L + KL+QFV T +E +L L ++W++E A +++ P +
Sbjct: 1 MNRLKSDQKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDNPNLFAGSTPQPSV 60
Query: 55 DTRHLEELYNRYKDPYLDM----ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEF 110
D ++E L+N+Y DP + + GI L DL + D +LV++W A T CEF
Sbjct: 61 DRSNIERLFNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCEF 120
Query: 111 SKQEFIGGLQSLGIDSLDKFRERISFMRAELKDER 145
S E++ G+ +L D++ R+RI + + L+ ++
Sbjct: 121 SLDEWVKGMTALQADTVQNLRQRIDSINSGLESDK 155
>sp|Q6DFA1|DCNL3_XENLA DCN1-like protein 3 OS=Xenopus laevis GN=dcun1d3 PE=2 SV=1
Length = 303
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 2 HKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYS-------QPQSKSL 53
HK S S++ ++ +SI G AS + + K D LE + + Q L
Sbjct: 28 HKRSSSHK---EEHMSICGKASGEILVNGTKKGDASLEASQPLAVGVDTKKKEQGVGAEL 84
Query: 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
+ + +EEL+ RYKD D IL +G+ C+DL VDP + +LV++W +AATMC+F+++
Sbjct: 85 SSLQRIEELFRRYKDEREDAILEEGMERFCDDLCVDPTEFRVLVLAWKFQAATMCKFTRR 144
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDE 144
EF G +S+ D ++ + + E K E
Sbjct: 145 EFFEGCKSINADGIESICSQFPGLLNEAKQE 175
>sp|Q60YT5|DCN1_CAEBR Defective in cullin neddylation protein 1 OS=Caenorhabditis
briggsae GN=dcn-1 PE=3 SV=3
Length = 367
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-----SKSLTDTRHLEELYNRY 66
L+QFV T A+E +L L ++W++E A ++Y P + + D +L+ +Y
Sbjct: 87 LRQFVQWTQATEPVSLNFLAKANWNIEYAMTLYYDNPNLFSSSAPATVDQSKTIQLFTQY 146
Query: 67 ---KDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123
+D + I G+ L DL +P D +L+++W KA T CEFS QEF G+ SL
Sbjct: 147 VDKRDGLGERIGPHGMQRLLIDLGYEPIDRRVLILAWVFKAETQCEFSLQEFTNGMASLQ 206
Query: 124 IDSLDKFRERISFMRAELKDERTCT 148
+DS+ +++I + A +K + T T
Sbjct: 207 VDSIQGLKQKIDALDAGMKADLTKT 231
>sp|Q4PF67|DCN1_USTMA Defective in cullin neddylation protein 1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=DCN1 PE=3 SV=1
Length = 319
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 30/164 (18%)
Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-------SKSLTDTR------- 57
L+QF +T A+ + A + LKA + +E A D F++ Q S S D +
Sbjct: 11 LRQFRQLTNATPQDANRILKAHGYRIEPATDAFFNNEQAQINASISSSTLDRKSEREVKE 70
Query: 58 HLEELYNRYKDPYLD---------------MILVDGITLLCNDLQVDPQDIVMLVVSWHM 102
L L++R++D D +I + G +C L+V P+D+V L +S+++
Sbjct: 71 RLNALFDRFRDAGADSDEEDDEASQPEDRDLISIGGALKMCEALEVSPEDVVFLPLSYYL 130
Query: 103 KAATMCEFSKQEFIGGLQSLGI-DSLDKFRERISFMRAELKDER 145
K+A+M F+++ +I G + L + D++DK ++ + +R EL D +
Sbjct: 131 KSASMGTFTREGYINGWKMLDLSDTIDKQKKTLEKLRQELLDNK 174
>sp|Q54GP1|DCN1L_DICDI DCN1-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0290025
PE=3 SV=1
Length = 249
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS-KSLTDTRHL 59
M++L + K +F+SIT A+E A+Q LK + W + A D FYS P + + D + +
Sbjct: 1 MYRLPADQKLKCTEFMSITEATEAKAIQYLKDASWRTDAAVDNFYSNPSNFANKFDKKAI 60
Query: 60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119
E ++N+YKD + I + + D+ ++ + ++ L V W K M +K EF+ +
Sbjct: 61 ETIFNKYKDSGEEQI-SEKLPEFVKDININDE-MMELAVLWKFKTKQMGVITKNEFMETM 118
Query: 120 QSLGIDSLDKFRERISFMRAEL 141
+ L D++ +++ +R +L
Sbjct: 119 ERLRCDNISSLEKQMETVRQQL 140
>sp|P0CN06|DCN1_CRYNJ Defective in cullin neddylation protein 1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=DCN1 PE=3 SV=1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 9/143 (6%)
Query: 7 SNRDKL--QQFVSITGASEKAALQALKASDWHLEGAFDVFYS-QPQSKS-LTDTRHLEEL 62
S +D L QF +ITG S A + +K H+E A D FY+ +P ++ R L E+
Sbjct: 9 STKDSLLVTQFRAITGTSSAEAAKYIKRYK-HIEAAVDAFYNNEPAPRADPAQERKLGEI 67
Query: 63 YNRYKDPY-LDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
+ ++KDP +I +DG LC +L +DP D V+ ++ + + E+ K F+ G+
Sbjct: 68 WEKFKDPSDPKLIKIDGTMELCEELDIDPGTDAVLFCLAADLGSKATGEWEKAPFVAGIA 127
Query: 121 SL--GIDSLDKFRERISFMRAEL 141
S IDSL K + + +R +L
Sbjct: 128 SYPGNIDSLPKLKAYLPTLRKKL 150
>sp|P0CN07|DCN1_CRYNB Defective in cullin neddylation protein 1 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=DCN1 PE=3 SV=1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 9/143 (6%)
Query: 7 SNRDKL--QQFVSITGASEKAALQALKASDWHLEGAFDVFYS-QPQSKS-LTDTRHLEEL 62
S +D L QF +ITG S A + +K H+E A D FY+ +P ++ R L E+
Sbjct: 9 STKDSLLVTQFRAITGTSSAEAAKYIKRYK-HIEAAVDAFYNNEPAPRADPAQERKLGEI 67
Query: 63 YNRYKDPY-LDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
+ ++KDP +I +DG LC +L +DP D V+ ++ + + E+ K F+ G+
Sbjct: 68 WEKFKDPSDPKLIKIDGTMELCEELDIDPGTDAVLFCLAADLGSKATGEWEKAPFVAGIA 127
Query: 121 SL--GIDSLDKFRERISFMRAEL 141
S IDSL K + + +R +L
Sbjct: 128 SYPGNIDSLPKLKAYLPTLRKKL 150
>sp|Q1RMX9|DCNL5_BOVIN DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 SV=1
Length = 236
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 46 SQPQSKSLTDTRHLEE-----LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW 100
SQP ++ ++ H + Y P +++ +G+ C D+ V+P++I+MLV++W
Sbjct: 32 SQPPARLISGEEHFSSKKCLAWFYEYAGP-DEVVGPEGMEKFCEDIGVEPENIIMLVLAW 90
Query: 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKD 143
++A +M F+K+E++ G+ SL D +K + + F+R++L D
Sbjct: 91 KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLND 133
>sp|Q5RDF9|DCNL5_PONAB DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=2 SV=1
Length = 237
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 46 SQPQSKSLTDTRHLEE-----LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW 100
SQP ++ ++ H + Y P +++ +G+ C D+ V+P++I+MLV++W
Sbjct: 33 SQPPARLISGEEHFSSKKCLAWFYEYAGP-DEVVGPEGMEKFCEDIGVEPENIIMLVLAW 91
Query: 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKD 143
++A +M F+K+E++ G+ SL D +K + + F+R++L D
Sbjct: 92 KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLND 134
>sp|Q9BTE7|DCNL5_HUMAN DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1
Length = 237
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 46 SQPQSKSLTDTRHLEE-----LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW 100
SQP ++ ++ H + Y P +++ +G+ C D+ V+P++I+MLV++W
Sbjct: 33 SQPPARLISGEEHFSSKKCLAWFYEYAGP-DEVVGPEGMEKFCEDIGVEPENIIMLVLAW 91
Query: 101 HMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKD 143
++A +M F+K+E++ G+ SL D +K + + F+R++L D
Sbjct: 92 KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLND 134
>sp|Q5PPL2|DCNL5_RAT DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1
Length = 237
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 50/72 (69%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
+++ +G+ C D+ V+P++I+MLV++W ++A +M F+K+E++ G+ SL D +K +
Sbjct: 63 EVVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQ 122
Query: 132 ERISFMRAELKD 143
R F+R++L D
Sbjct: 123 SRFDFLRSQLND 134
>sp|Q9CXV9|DCNL5_MOUSE DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1
Length = 237
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 50/72 (69%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
+++ +G+ C D+ V+P++I+MLV++W ++A +M F+K+E++ G+ SL D +K +
Sbjct: 63 EVVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQ 122
Query: 132 ERISFMRAELKD 143
R F+R++L D
Sbjct: 123 SRFDFLRSQLND 134
>sp|Q5RHX6|DCNL4_DANRE DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=2 SV=2
Length = 280
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 48/72 (66%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
D++ +G+ C D+ V+P+++VMLV++W + A +M F+ QE++ G+ SL DS +K R
Sbjct: 106 DVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQSMGYFTLQEWLKGMGSLQCDSTEKLR 165
Query: 132 ERISFMRAELKD 143
+ ++R+ L D
Sbjct: 166 NSLDYLRSVLND 177
>sp|Q92564|DCNL4_HUMAN DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2
Length = 292
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
D++ +G+ C D+ V+P+++VMLV++W + A M F+ QE++ G+ SL D+ +K R
Sbjct: 118 DVVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLR 177
Query: 132 ERISFMRAELKD 143
+ ++R+ L D
Sbjct: 178 NTLDYLRSFLND 189
>sp|Q8CCA0|DCNL4_MOUSE DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=2 SV=1
Length = 292
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%)
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
D + +G+ C D+ V+P+++VMLV++W + A M F+ QE++ G+ SL D+ +K R
Sbjct: 118 DAVGPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLR 177
Query: 132 ERISFMRAELKD 143
+ ++R+ L D
Sbjct: 178 TTLDYLRSLLND 189
>sp|Q6C0B6|DCN1_YARLI Defective in cullin neddylation protein 1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=DCN1 PE=3 SV=1
Length = 240
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 11 KLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPY 70
++++ ++ TG+ EK A AL+ DW++E A D + PQ D +++++Y++
Sbjct: 10 EIRRVMTFTGSKEKTARDALEKFDWNVEVAIDHILNTPQ----VDLSGASKVFDKYRNAD 65
Query: 71 LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL 127
D I +DG DL + ++ +L V+ + ++ F+++ F+ G ++G D+L
Sbjct: 66 SDEIDLDGTIQYITDLGLSLEEPTVLAVAMTAGSPSVGTFTRKPFVEGWAAIGGDTL 122
>sp|Q86JM4|DCN1M_DICDI DCN1-like protein 2 OS=Dictyostelium discoideum GN=DDB_G0272016
PE=4 SV=1
Length = 267
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 49 QSKSLTDTRHLEELYNRYKDPYLD---MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA 105
+ K++ H LY + +LD I +GI C+D+ + P +LV++W M A+
Sbjct: 66 KGKNIIKAIHYTYLYTYIFNVHLDDDETIGPEGIARFCSDIGLAPDSFEILVLAWTMNAS 125
Query: 106 TMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDERT 146
M FSK EF G + L L +++++ +LK + T
Sbjct: 126 KMGYFSKNEFSSGFEKLQCSDLSTLKKQLNSTSQKLKHDST 166
>sp|Q8WZK4|DCN1_SCHPO Defective in cullin neddylation protein 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dcn1 PE=3 SV=1
Length = 251
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 11/133 (8%)
Query: 15 FVSITGASEKAALQALKASDWHLEGAFDVFYSQ-PQSKSLTDT-RHLEELYNRYKDPY-L 71
F T S KAAL LK ++ +DV Y++ Q KS + + L +++++
Sbjct: 12 FSKATSTSSKAALSWLKKYNFD----YDVAYTKWIQQKSREEAEKQLNNVFSQFSSKEDK 67
Query: 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKF- 130
D+I +DG L L + +D L+VS+ +K+ M EF ++ F+ G +L SLD+
Sbjct: 68 DLIELDGSVQLFTALDISLEDPETLLVSYFLKSPRMGEFHRESFVEGALNLSTTSLDQLK 127
Query: 131 ---RERISFMRAE 140
+E++ R++
Sbjct: 128 LAIKEKVQVWRSD 140
>sp|Q5AWS1|DCN1_EMENI Defective in cullin neddylation protein 1 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=dcn1 PE=3 SV=1
Length = 308
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 43/187 (22%)
Query: 1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ--PQSKSLT---- 54
M + + + ++ QFVS T A+ A + L+ S W+ E A D F ++ P S L
Sbjct: 1 MPPYTAAQKQQITQFVSFTQANNTTAAKFLRQSRWNTEEAIDAFKNRIAPASMGLIFRPC 60
Query: 55 DTRHLEELYNR-------------------------YKDPYL------------DMILVD 77
T + E R Y +L D I ++
Sbjct: 61 ATAGVREAVLRISIFQKLIPGLPAGNDALADWVLYLYGFTFLLKEFRDSPEENPDTIGIE 120
Query: 78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFM 137
G D++V+ ++ L ++ +++ +M EF+++ F+ G +S+ DS+ K + +
Sbjct: 121 GAMRYLGDIEVELDEVTCLAIAELLQSPSMGEFTREGFLNGWRSVQCDSIAKMAAHAANL 180
Query: 138 RAELKDE 144
R + E
Sbjct: 181 RTRIPSE 187
>sp|Q52DM9|DCN1_MAGO7 Defective in cullin neddylation protein 1 OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DCN1 PE=3
SV=1
Length = 281
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 14 QFVSITGASEKAALQALKASDWHLEGAFDVFY-SQPQ-SKSLTDTRHLEELYNRYKDPYL 71
QFV +T ++K A + LK ++W L+ A D ++ S P + S + L+++++ +D
Sbjct: 13 QFVHMTATNDKVAQKFLKNANWKLDIAADAYFNSNPNMATSSSSKPKLDKMFSDLQDTQE 72
Query: 72 DMI--LVDGITL-LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121
D L G + + L VDP+ + + V+ +KA ++ F+ G Q+
Sbjct: 73 DSPDELGAGSAIEYASSLGVDPESVGIFVLMELVKAPAFGVITRSGFVEGWQA 125
>sp|F1NW29|TYDP2_CHICK Tyrosyl-DNA phosphodiesterase 2 OS=Gallus gallus GN=TDP2 PE=3
SV=2
Length = 369
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT 54
+L++ + +F ++T + E A L S WHLE A D ++ P ++ T
Sbjct: 28 RLAKRRKVLCSEFAAVTSSDEAVASGFLAGSGWHLERALDAYFEAPMNEQTT 79
>sp|Q9XWG3|TYDP2_CAEEL 5'-tyrosyl-DNA phosphodiesterase OS=Caenorhabditis elegans
GN=Y63D3A.4 PE=1 SV=1
Length = 362
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46
S S+ KL +F IT E A L+ DW L+ A DVFY
Sbjct: 42 SMSDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYG 83
>sp|Q5ADL9|DCN1_CANAL Defective in cullin neddylation protein 1 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=DCN1 PE=3 SV=1
Length = 304
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 6 RSNRDKL-QQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTR------- 57
+S++ +L QQF +TG S A + L++ + L A D +Y++ +K+ +
Sbjct: 9 KSSKTQLRQQFCELTGTSNTTATKYLESVRYDLARAIDNYYNKHPNKAQVTKKPVKVKID 68
Query: 58 -HLEELYNRYK---DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
L +++++YK DP + I ++G DL + P I L ++ +K+ F+++
Sbjct: 69 DRLIQIFDKYKDSEDP--NKIDIEGTLTYLGDLGISPDQIESLSLALLLKSPKTGVFTRE 126
Query: 114 EFIG---GLQSLGIDSLDKFRERIS 135
F+ Q I ++ +F R +
Sbjct: 127 NFLHIWQYYQCFDIGAMSEFITRFN 151
>sp|O35987|NSF1C_RAT NSFL1 cofactor p47 OS=Rattus norvegicus GN=Nsfl1c PE=1 SV=1
Length = 370
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
++ +D L++FV++TGA E A L+++ W L+ A FY
Sbjct: 1 MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42
>sp|A9L9E4|NU5C_LEMMI NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Lemna
minor GN=ndhF PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 8 NRDKLQQFVSITGASEKAALQALK--ASDW-HLEGAFDVFYSQPQSKSLTDTRHLEELYN 64
N D + V I +++ +L + +W H G D+FY+ ++S+ + L + ++
Sbjct: 630 NLDLMNLLVKIGTKTKRVSLDKIANIVYNWSHNRGYIDIFYTNVVTQSIRELAKLTQFFD 689
Query: 65 RYKDPYLDMILVDGIT 80
RY ++DGIT
Sbjct: 690 RY--------IIDGIT 697
>sp|Q3SZC4|NSF1C_BOVIN NSFL1 cofactor p47 OS=Bos taurus GN=NSFL1C PE=2 SV=1
Length = 370
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
+D L++FV++TGA E A L+++ W L+ A FY
Sbjct: 6 QDALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42
>sp|Q5REY7|UBXN7_PONAB UBX domain-containing protein 7 OS=Pongo abelii GN=UBXN7 PE=2
SV=2
Length = 489
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVF 44
+QQF +ITGASE L+A + +LE A +F
Sbjct: 17 IQQFTTITGASESVGKHMLEACNNNLEMAVTMF 49
>sp|O94888|UBXN7_HUMAN UBX domain-containing protein 7 OS=Homo sapiens GN=UBXN7 PE=1
SV=2
Length = 489
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVF 44
+QQF +ITGASE L+A + +LE A +F
Sbjct: 17 IQQFTTITGASESVGKHMLEACNNNLEMAVTMF 49
>sp|Q6P5G6|UBXN7_MOUSE UBX domain-containing protein 7 OS=Mus musculus GN=Ubxn7 PE=1
SV=2
Length = 467
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVF 44
+QQF +ITGASE L+A + +LE A +F
Sbjct: 17 IQQFTAITGASESVGKHMLEACNNNLEMAVTMF 49
>sp|F6V6I0|UBP13_XENTR Ubiquitin carboxyl-terminal hydrolase 13 OS=Xenopus tropicalis
GN=usp13 PE=3 SV=2
Length = 846
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 20 GASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDT 56
G ALQAL+A++ +LE A D +S P+S+ D
Sbjct: 721 GFPRNHALQALRATNNNLERALDWMFSHPESEEGADN 757
>sp|Q5ZK10|NSF1C_CHICK NSFL1 cofactor p47 OS=Gallus gallus GN=NSFL1C PE=2 SV=1
Length = 369
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
+ L++FV++TGA E+ A L+++ W L+ A FY
Sbjct: 6 EALREFVAVTGAEEERARFFLESAGWDLQIALASFY 41
>sp|B1YP62|GLMU_BURA4 Bifunctional protein GlmU OS=Burkholderia ambifaria (strain MC40-6)
GN=glmU PE=3 SV=1
Length = 453
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 37 LEGAFDVFYSQP----QSKSLTDTRHLEELYNRYKDPYLDMILVDGITL 81
+E FDV SQP ++ + L EL ++ D +LVDG+TL
Sbjct: 202 IEAGFDVVTSQPDDEWETLGVNSKAQLAELERIHQRTIADALLVDGVTL 250
>sp|Q9CZ44|NSF1C_MOUSE NSFL1 cofactor p47 OS=Mus musculus GN=Nsfl1c PE=1 SV=1
Length = 370
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
++ +D L++FV++TG E A L+++ W L+ A FY
Sbjct: 1 MAEERQDALREFVAVTGTEEDRARFFLESAGWDLQIALASFY 42
>sp|A8XU68|TYDP2_CAEBR 5'-tyrosyl-DNA phosphodiesterase OS=Caenorhabditis briggsae
GN=CBG18823 PE=3 SV=2
Length = 337
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRH 58
+S+ K+++F IT E A L+ W L+ A DVF+ S + +TR+
Sbjct: 31 QSDEAKMREFAEITATDEIMAQSILQDVGWDLKRALDVFFG---SDAFKETRN 80
>sp|Q0BB89|GLMU_BURCM Bifunctional protein GlmU OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=glmU PE=3 SV=1
Length = 453
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 37 LEGAFDVFYSQP----QSKSLTDTRHLEELYNRYKDPYLDMILVDGITL 81
+E FDV SQP ++ + L EL ++ D +LVDG+TL
Sbjct: 202 IEAGFDVVTSQPDDEWETLGVNSKAQLAELERIHQRNVADALLVDGVTL 250
>sp|A3DM71|KTHY_STAMF Probable thymidylate kinase OS=Staphylothermus marinus (strain
ATCC 43588 / DSM 3639 / F1) GN=tmk PE=3 SV=1
Length = 199
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 17 SITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMI 74
I GA + + A K D+ +E F+V Y+ +L L++ YN Y+D YLD +
Sbjct: 13 GIDGAGKTSI--AFKLRDFLVEKGFNVHYTYEPYNTLY-VEALKKKYNEYRDAYLDAL 67
>sp|Q5RBG3|NSF1C_PONAB NSFL1 cofactor p47 OS=Pongo abelii GN=NSFL1C PE=2 SV=1
Length = 370
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
++ L++FV++TGA E A L+++ W L+ A FY
Sbjct: 6 QEALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42
>sp|Q9UNZ2|NSF1C_HUMAN NSFL1 cofactor p47 OS=Homo sapiens GN=NSFL1C PE=1 SV=2
Length = 370
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
++ L++FV++TGA E A L+++ W L+ A FY
Sbjct: 6 QEALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,880,011
Number of Sequences: 539616
Number of extensions: 1795924
Number of successful extensions: 5018
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4949
Number of HSP's gapped (non-prelim): 60
length of query: 150
length of database: 191,569,459
effective HSP length: 107
effective length of query: 43
effective length of database: 133,830,547
effective search space: 5754713521
effective search space used: 5754713521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)