Query 031969
Match_columns 150
No_of_seqs 146 out of 465
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 12:27:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031969.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031969hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bq3_A Defective in cullin ned 100.0 1.2E-47 4E-52 313.3 13.0 146 2-149 9-166 (270)
2 3kev_A Galieria sulfuraria DCU 100.0 1.9E-35 6.3E-40 232.0 10.2 97 53-149 3-99 (199)
3 4gba_A DCN1-like protein 3; E3 100.0 4.6E-35 1.6E-39 232.7 8.6 97 53-149 2-98 (221)
4 3tdu_A DCN1-like protein 1; E2 100.0 5.5E-35 1.9E-39 229.4 7.8 95 55-149 2-97 (200)
5 2dam_A ETEA protein; KIAA0887, 99.6 4.4E-15 1.5E-19 97.7 5.5 52 1-52 11-63 (67)
6 2dal_A Protein KIAA0794; FAS a 99.5 4E-14 1.4E-18 91.7 5.4 48 3-50 10-57 (62)
7 1v92_A NSFL1 cofactor P47; 3-h 99.5 4.7E-14 1.6E-18 85.7 4.9 43 6-48 3-45 (46)
8 3e21_A HFAF1, FAS-associated f 99.4 1.1E-13 3.7E-18 84.3 3.7 42 5-46 2-44 (45)
9 2dzl_A Protein FAM100B; UBA-li 99.3 2.1E-12 7.1E-17 84.6 5.5 40 10-49 19-58 (66)
10 2jp7_A MRNA export factor MEX6 98.4 3.9E-07 1.3E-11 57.8 5.1 45 3-47 1-45 (57)
11 1oai_A Nuclear RNA export fact 98.4 5.1E-07 1.8E-11 57.6 4.8 44 3-46 2-45 (59)
12 4gew_A 5'-tyrosyl-DNA phosphod 98.3 4.3E-07 1.5E-11 75.5 3.5 42 7-48 44-85 (362)
13 1z96_A DNA-damage, UBA-domain 97.9 1.9E-05 6.3E-10 45.7 4.4 39 6-45 2-40 (40)
14 1wj7_A Hypothetical protein (R 97.7 4.9E-05 1.7E-09 53.5 4.4 42 7-48 38-79 (104)
15 1jkg_B TAP; NTF2-like domain, 97.1 6.5E-05 2.2E-09 60.0 0.0 45 3-47 193-237 (250)
16 2l2d_A OTU domain-containing p 97.0 0.0013 4.4E-08 42.4 5.1 41 5-45 14-54 (73)
17 1ify_A HHR23A, UV excision rep 96.8 0.0019 6.3E-08 39.2 4.6 41 6-47 6-46 (49)
18 2b1u_A Calmodulin-like protein 96.8 0.0027 9.1E-08 38.9 5.4 68 54-121 3-70 (71)
19 2g3q_A Protein YBL047C; endocy 96.7 0.002 6.7E-08 37.7 3.7 39 8-47 4-42 (43)
20 1tiz_A Calmodulin-related prot 96.6 0.0078 2.7E-07 36.2 6.6 64 58-121 2-65 (67)
21 1dv0_A DNA repair protein HHR2 96.6 0.00058 2E-08 41.2 1.3 43 5-48 1-43 (47)
22 1vg5_A RSGI RUH-014, rhomboid 96.6 0.0029 1E-07 41.6 4.7 44 4-48 25-68 (73)
23 2mys_C Myosin; muscle protein, 96.6 0.023 8E-07 38.8 9.5 65 57-122 8-75 (149)
24 2ktg_A Calmodulin, putative; e 96.5 0.012 4.1E-07 37.3 7.2 67 56-122 13-79 (85)
25 1avs_A Troponin C; muscle cont 96.5 0.017 5.9E-07 37.2 7.9 66 56-121 19-84 (90)
26 2kn2_A Calmodulin; S MAPK phos 96.4 0.027 9.2E-07 36.2 8.6 71 55-125 7-77 (92)
27 1qx2_A Vitamin D-dependent cal 96.4 0.01 3.5E-07 36.6 6.2 68 55-122 3-74 (76)
28 2joj_A Centrin protein; N-term 96.4 0.015 5.2E-07 36.0 6.8 66 56-121 6-71 (77)
29 1veg_A NEDD8 ultimate buster-1 96.4 0.0048 1.7E-07 41.6 4.6 40 8-48 29-68 (83)
30 2jy5_A Ubiquilin-1; UBA, alter 96.3 0.0046 1.6E-07 37.9 4.0 39 9-48 13-52 (52)
31 1dtl_A Cardiac troponin C; hel 96.2 0.039 1.3E-06 38.4 9.1 67 56-122 17-84 (161)
32 2opo_A Polcalcin CHE A 3; calc 96.2 0.061 2.1E-06 34.0 9.2 74 56-131 10-83 (86)
33 2kz2_A Calmodulin, CAM; TR2C, 96.1 0.043 1.5E-06 36.1 8.4 67 54-120 26-92 (94)
34 1c7v_A CAVP, calcium vector pr 96.1 0.019 6.4E-07 36.1 6.2 69 55-124 7-76 (81)
35 2bl0_C Myosin regulatory light 96.0 0.07 2.4E-06 36.3 9.6 65 57-121 6-70 (142)
36 3fwb_A Cell division control p 96.0 0.065 2.2E-06 37.1 9.5 66 56-121 22-87 (161)
37 2knz_A Ubiquilin-4; cytoplasm, 96.0 0.0066 2.3E-07 37.3 3.7 39 9-48 12-51 (53)
38 2lmt_A Calmodulin-related prot 96.0 0.1 3.5E-06 36.4 10.5 120 1-120 1-146 (148)
39 4ds7_A Calmodulin, CAM; protei 96.0 0.031 1.1E-06 38.1 7.5 66 56-121 10-75 (147)
40 2dkl_A Trinucleotide repeat co 96.0 0.011 3.8E-07 39.8 4.8 39 9-48 22-60 (85)
41 2dak_A Ubiquitin carboxyl-term 95.9 0.01 3.5E-07 37.6 4.2 40 7-47 8-47 (63)
42 2dah_A Ubiquilin-3; UBA domain 95.9 0.0078 2.7E-07 37.2 3.4 40 9-49 10-50 (54)
43 2cp9_A EF-TS, EF-TSMT, elongat 95.8 0.0091 3.1E-07 38.3 3.7 37 9-45 10-46 (64)
44 1wiv_A UBP14, ubiquitin-specif 95.8 0.014 4.6E-07 38.2 4.6 41 7-48 28-68 (73)
45 1j7q_A CAVP, calcium vector pr 95.8 0.046 1.6E-06 34.7 7.1 65 56-121 13-80 (86)
46 1wji_A Tudor domain containing 95.8 0.013 4.3E-07 37.4 4.2 40 8-48 9-48 (63)
47 1k9u_A Polcalcin PHL P 7; poll 95.7 0.036 1.2E-06 34.5 6.4 65 57-122 3-67 (78)
48 3ox6_A Calcium-binding protein 95.7 0.055 1.9E-06 37.0 7.8 67 56-122 10-76 (153)
49 2jnf_A Troponin C; stretch act 95.7 0.044 1.5E-06 38.1 7.4 67 56-122 12-79 (158)
50 3rm1_A Protein S100-B; alpha-h 95.7 0.067 2.3E-06 35.1 7.9 66 57-122 9-81 (92)
51 1yx7_A Calsensin, LAN3-6 antig 95.7 0.036 1.2E-06 34.8 6.2 67 55-121 5-77 (83)
52 1top_A Troponin C; contractIle 95.6 0.066 2.3E-06 37.1 8.0 68 56-123 95-162 (162)
53 1wgn_A UBAP1, ubiquitin associ 95.6 0.014 4.7E-07 37.2 3.9 47 3-50 14-60 (63)
54 2ccm_A Calexcitin; EF hand, ca 95.6 0.061 2.1E-06 38.7 8.0 67 56-122 11-93 (191)
55 3li6_A Calcium-binding protein 95.6 0.0066 2.3E-07 36.6 2.3 63 60-122 3-65 (66)
56 3qrx_A Centrin; calcium-bindin 95.5 0.065 2.2E-06 37.6 7.8 66 56-121 27-92 (169)
57 2lv7_A Calcium-binding protein 95.5 0.061 2.1E-06 36.3 7.2 64 56-119 35-98 (100)
58 3k21_A PFCDPK3, calcium-depend 95.5 0.057 2E-06 39.6 7.6 67 55-122 50-116 (191)
59 1wlz_A DJBP, CAP-binding prote 95.4 0.068 2.3E-06 35.2 7.2 72 56-127 23-94 (105)
60 2pvb_A Protein (parvalbumin); 95.4 0.14 5E-06 33.5 8.8 66 55-120 39-107 (108)
61 3fwb_A Cell division control p 95.4 0.083 2.8E-06 36.5 7.8 66 56-121 95-160 (161)
62 2aao_A CDPK, calcium-dependent 95.4 0.077 2.6E-06 37.1 7.7 65 57-121 27-91 (166)
63 2f2o_A Calmodulin fused with c 95.3 0.09 3.1E-06 37.3 8.1 66 56-121 10-75 (179)
64 1nya_A Calerythrin; EF-hand, m 95.3 0.079 2.7E-06 37.2 7.6 69 56-124 6-89 (176)
65 1vej_A Riken cDNA 4931431F19; 95.3 0.038 1.3E-06 36.3 5.4 40 9-49 30-70 (74)
66 5pal_A Parvalbumin; calcium-bi 95.3 0.3 1E-05 32.0 10.1 68 54-121 38-108 (109)
67 2pmy_A RAS and EF-hand domain- 95.2 0.083 2.8E-06 34.3 7.0 65 56-122 26-90 (91)
68 1exr_A Calmodulin; high resolu 95.2 0.095 3.2E-06 36.2 7.7 64 57-120 10-73 (148)
69 3j04_B Myosin regulatory light 95.2 0.16 5.5E-06 34.5 8.8 100 22-121 25-140 (143)
70 3fs7_A Parvalbumin, thymic; ca 95.2 0.25 8.4E-06 32.4 9.4 67 54-120 39-108 (109)
71 1pva_A Parvalbumin; calcium bi 95.2 0.26 8.7E-06 32.3 9.5 68 54-121 39-109 (110)
72 1k8u_A S100A6, calcyclin, CACY 95.2 0.058 2E-06 34.3 6.0 66 57-122 10-80 (90)
73 2d58_A Allograft inflammatory 95.2 0.065 2.2E-06 35.7 6.5 68 56-123 31-98 (107)
74 1wdc_C Scallop myosin; calcium 95.2 0.058 2E-06 37.4 6.5 65 57-122 9-75 (156)
75 1k2h_A S100A1, S-100 protein, 95.2 0.07 2.4E-06 34.2 6.4 67 56-122 8-81 (93)
76 2obh_A Centrin-2; DNA repair c 95.1 0.074 2.5E-06 36.8 7.0 64 57-120 6-69 (143)
77 2znd_A Programmed cell death p 95.0 0.22 7.7E-06 35.2 9.4 66 57-122 74-139 (172)
78 2bl0_B Myosin regulatory light 95.0 0.087 3E-06 35.8 7.0 63 56-121 4-66 (145)
79 3ll8_B Calcineurin subunit B t 95.0 0.092 3.2E-06 36.1 7.1 72 54-125 72-148 (155)
80 2ovk_C Myosin catalytic light 95.0 0.067 2.3E-06 37.3 6.4 63 57-120 9-73 (159)
81 1wdc_B Scallop myosin; calcium 95.0 0.55 1.9E-05 32.4 12.3 100 22-122 36-151 (156)
82 1top_A Troponin C; contractIle 95.0 0.083 2.8E-06 36.6 6.8 47 73-119 36-82 (162)
83 1rwy_A Parvalbumin alpha; EF-h 94.9 0.13 4.4E-06 33.8 7.4 67 55-121 39-108 (109)
84 3ox6_A Calcium-binding protein 94.9 0.1 3.6E-06 35.5 7.1 118 3-120 4-152 (153)
85 1rro_A RAT oncomodulin; calciu 94.9 0.28 9.6E-06 32.1 9.0 66 55-120 39-107 (108)
86 1wr1_B Ubiquitin-like protein 94.8 0.036 1.2E-06 34.7 4.0 39 9-48 18-57 (58)
87 4ds7_A Calmodulin, CAM; protei 94.8 0.12 4.1E-06 35.1 7.1 64 56-120 83-146 (147)
88 1jba_A GCAP-2, protein (guanyl 94.7 0.21 7.3E-06 36.4 8.9 69 55-123 20-89 (204)
89 2lmt_A Calmodulin-related prot 94.7 0.33 1.1E-05 33.8 9.5 66 57-122 10-75 (148)
90 2jnf_A Troponin C; stretch act 94.7 0.35 1.2E-05 33.3 9.6 65 56-120 90-154 (158)
91 1jfj_A Ehcabp, calcium-binding 94.7 0.081 2.8E-06 35.2 6.0 69 55-123 34-105 (134)
92 1bu3_A Calcium-binding protein 94.7 0.32 1.1E-05 31.9 8.9 66 55-120 40-108 (109)
93 3qrx_A Centrin; calcium-bindin 94.7 0.16 5.4E-06 35.6 7.7 118 4-121 22-165 (169)
94 2bwb_A Ubiquitin-like protein 94.7 0.043 1.5E-06 32.6 3.9 37 9-46 8-45 (46)
95 2znd_A Programmed cell death p 94.6 0.17 5.7E-06 35.9 7.8 65 56-120 6-71 (172)
96 2ekk_A UBA domain from E3 ubiq 94.6 0.054 1.9E-06 32.1 4.3 39 8-48 9-47 (47)
97 2dai_A Ubadc1, ubiquitin assoc 94.5 0.05 1.7E-06 36.4 4.4 40 8-48 29-68 (83)
98 1cb1_A Calbindin D9K; calcium- 94.4 0.093 3.2E-06 32.2 5.4 66 55-122 5-76 (78)
99 1w7j_B Myosin light chain 1; m 94.4 0.041 1.4E-06 38.0 4.0 68 56-123 9-78 (151)
100 2mys_B Myosin; muscle protein, 94.3 0.85 2.9E-05 31.7 11.5 68 55-122 93-160 (166)
101 1ggw_A Protein (CDC4P); light 94.3 0.068 2.3E-06 36.4 5.0 62 57-122 5-66 (140)
102 2bl0_B Myosin regulatory light 94.3 0.17 6E-06 34.2 7.0 68 54-121 73-140 (145)
103 1wdc_C Scallop myosin; calcium 94.2 0.21 7.3E-06 34.4 7.5 68 55-122 82-151 (156)
104 1uhk_A Aequorin 2, aequorin; E 94.2 0.12 4E-06 36.9 6.2 67 56-122 15-91 (191)
105 1y1x_A Leishmania major homolo 94.2 0.29 9.8E-06 35.6 8.4 67 55-121 25-91 (191)
106 3mse_B Calcium-dependent prote 94.2 0.23 7.8E-06 35.7 7.8 65 56-122 38-102 (180)
107 2cpw_A CBL-interacting protein 94.1 0.077 2.6E-06 33.7 4.5 38 10-48 21-59 (64)
108 3h4s_E KCBP interacting Ca2+-b 94.1 0.11 3.8E-06 36.1 5.9 68 56-123 39-107 (135)
109 2y5i_A S100Z, S100 calcium bin 94.1 0.2 6.9E-06 33.5 6.9 67 56-122 9-82 (99)
110 1y1x_A Leishmania major homolo 94.1 0.49 1.7E-05 34.3 9.6 66 57-122 93-158 (191)
111 2ovk_C Myosin catalytic light 94.1 0.3 1E-05 33.9 8.1 68 55-122 83-152 (159)
112 2mys_B Myosin; muscle protein, 94.1 0.52 1.8E-05 32.8 9.4 63 56-122 24-87 (166)
113 2f2o_A Calmodulin fused with c 94.1 0.15 5E-06 36.2 6.5 123 3-125 4-152 (179)
114 1s6j_A CDPK, calcium-dependent 94.0 0.044 1.5E-06 34.7 3.2 64 56-119 22-85 (87)
115 3sjs_A URE3-BP sequence specif 94.0 0.25 8.5E-06 37.2 8.1 66 56-121 50-115 (220)
116 1m45_A MLC1P, myosin light cha 93.9 0.16 5.5E-06 34.7 6.3 67 55-121 81-147 (148)
117 1j55_A S-100P protein; metal b 93.9 0.22 7.4E-06 32.9 6.7 67 56-122 8-81 (95)
118 3dtp_E RLC, myosin regulatory 93.9 0.38 1.3E-05 35.2 8.6 64 55-122 55-118 (196)
119 1m45_A MLC1P, myosin light cha 93.8 0.062 2.1E-06 36.8 4.0 64 59-122 6-70 (148)
120 1qv0_A Obelin, OBL; photoprote 93.8 0.16 5.6E-06 36.3 6.5 67 56-122 19-95 (195)
121 1dtl_A Cardiac troponin C; hel 93.8 0.13 4.5E-06 35.6 5.8 67 56-122 94-160 (161)
122 2obh_A Centrin-2; DNA repair c 93.8 0.28 9.6E-06 33.8 7.4 64 57-120 79-142 (143)
123 2lnk_A Protein S100-A4; EF-han 93.8 0.37 1.3E-05 33.4 8.0 66 56-121 21-93 (113)
124 1xk4_A Calgranulin A; S100 fam 93.8 0.1 3.4E-06 34.0 4.8 65 56-122 9-78 (93)
125 2mys_C Myosin; muscle protein, 93.6 0.32 1.1E-05 32.9 7.4 66 55-121 83-148 (149)
126 1wy9_A Allograft inflammatory 93.6 0.2 6.9E-06 35.4 6.4 66 56-121 47-112 (147)
127 2ovk_B RLC, myosin regulatory 93.5 0.24 8.2E-06 34.1 6.7 66 55-121 83-148 (153)
128 2jjz_A Ionized calcium-binding 93.5 0.25 8.4E-06 35.0 6.8 67 56-122 49-115 (150)
129 2cwb_A Chimera of immunoglobul 93.4 0.07 2.4E-06 37.5 3.7 41 9-49 67-107 (108)
130 1fpw_A Yeast frequenin, calciu 93.4 0.97 3.3E-05 32.0 10.0 109 9-122 10-128 (190)
131 1alv_A Calpain, S-camld; calci 93.4 0.63 2.2E-05 32.8 8.9 65 57-122 77-141 (173)
132 1qls_A S100C protein, calgizza 93.4 0.25 8.5E-06 32.0 6.2 67 56-122 12-85 (99)
133 1gjy_A Sorcin, CP-22, V19; cal 93.3 0.78 2.7E-05 32.2 9.2 64 57-122 72-135 (167)
134 1s6i_A CDPK, calcium-dependent 93.3 0.21 7.1E-06 36.5 6.2 70 55-124 44-113 (188)
135 2bec_A Calcineurin B homologou 93.3 0.25 8.5E-06 36.0 6.7 69 56-124 113-186 (202)
136 3n22_A Protein S100-A2; EF-han 93.2 0.51 1.7E-05 31.6 7.7 68 56-123 10-84 (98)
137 1fi6_A EH domain protein REPS1 93.1 0.27 9.3E-06 32.1 6.1 65 56-122 8-72 (92)
138 1alv_A Calpain, S-camld; calci 93.1 0.47 1.6E-05 33.5 7.9 64 57-121 4-75 (173)
139 2bl0_C Myosin regulatory light 93.1 0.23 7.7E-06 33.7 5.9 62 56-118 78-139 (142)
140 3akb_A Putative calcium bindin 93.1 0.46 1.6E-05 32.7 7.6 69 56-124 3-86 (166)
141 1s6c_A KV4 potassium channel-i 93.0 1.1 3.8E-05 31.6 9.8 111 10-122 4-121 (183)
142 1exr_A Calmodulin; high resolu 93.0 0.56 1.9E-05 32.2 8.0 64 57-120 83-146 (148)
143 1uhk_A Aequorin 2, aequorin; E 93.0 0.36 1.2E-05 34.3 7.1 62 61-122 113-174 (191)
144 3e3r_A Calcyphosin, calcyphosi 93.0 0.25 8.5E-06 35.7 6.3 47 73-119 53-99 (204)
145 2kgr_A Intersectin-1; structur 93.0 0.41 1.4E-05 32.6 7.1 65 56-122 13-77 (111)
146 1whc_A RSGI RUH-027, UBA/UBX 3 92.9 0.051 1.8E-06 34.5 2.1 39 9-48 10-49 (64)
147 1ggw_A Protein (CDC4P); light 92.9 0.22 7.7E-06 33.7 5.6 65 56-121 75-139 (140)
148 1c07_A Protein (epidermal grow 92.9 0.32 1.1E-05 31.9 6.2 66 55-122 8-73 (95)
149 3j04_B Myosin regulatory light 92.8 0.16 5.4E-06 34.5 4.8 61 57-121 7-67 (143)
150 1qjt_A EH1, epidermal growth f 92.8 0.31 1.1E-05 32.5 6.2 65 56-122 10-74 (99)
151 3sjs_A URE3-BP sequence specif 92.8 0.39 1.3E-05 36.1 7.4 75 57-137 117-191 (220)
152 3u0k_A Rcamp; fluorescent prot 92.8 0.36 1.2E-05 41.5 7.8 65 57-121 302-366 (440)
153 2ovk_B RLC, myosin regulatory 92.8 0.22 7.6E-06 34.3 5.5 61 57-121 16-76 (153)
154 3akb_A Putative calcium bindin 92.7 0.64 2.2E-05 32.0 7.9 63 58-122 99-161 (166)
155 2d8n_A Recoverin; structural g 92.7 2 7E-05 30.9 11.5 112 9-122 18-136 (207)
156 3fia_A Intersectin-1; EH 1 dom 92.7 0.32 1.1E-05 34.6 6.3 64 55-122 31-95 (121)
157 1k94_A Grancalcin; penta-EF-ha 92.6 0.69 2.4E-05 32.3 8.1 64 57-122 70-133 (165)
158 1wdc_B Scallop myosin; calcium 92.6 0.89 3.1E-05 31.2 8.6 62 56-121 17-78 (156)
159 1qv0_A Obelin, OBL; photoprote 92.6 0.38 1.3E-05 34.3 6.8 62 61-122 117-178 (195)
160 2i7a_A Calpain 13; calcium-dep 92.5 0.82 2.8E-05 33.3 8.7 64 57-122 76-143 (174)
161 2dag_A Ubiquitin carboxyl-term 92.5 0.12 4.2E-06 33.6 3.6 40 8-48 9-49 (74)
162 3dtp_E RLC, myosin regulatory 92.5 1.2 4.2E-05 32.3 9.6 117 4-121 51-189 (196)
163 1a4p_A S100A10; S100 family, E 92.4 0.16 5.4E-06 33.8 4.2 66 56-122 8-78 (96)
164 1q80_A SCP, sarcoplasmic calci 92.4 0.59 2E-05 32.6 7.5 64 56-121 93-156 (174)
165 2r2i_A Guanylyl cyclase-activa 92.4 0.3 1E-05 35.4 6.0 67 57-123 52-118 (198)
166 2sas_A Sarcoplasmic calcium-bi 92.4 0.37 1.3E-05 33.9 6.4 67 56-122 7-89 (185)
167 1iq3_A Ralbp1-interacting prot 92.3 0.55 1.9E-05 32.1 7.0 66 55-122 20-85 (110)
168 1vek_A UBP14, ubiquitin-specif 92.2 0.18 6.2E-06 33.7 4.2 40 8-48 29-69 (84)
169 1s6c_A KV4 potassium channel-i 92.2 0.61 2.1E-05 33.0 7.4 69 55-123 16-86 (183)
170 2qac_A Myosin A tail domain in 92.2 0.76 2.6E-05 31.2 7.7 32 106-137 97-129 (146)
171 2wcb_A Protein S100-A12; calci 92.0 0.29 1E-05 32.3 5.2 67 56-122 11-84 (95)
172 1nya_A Calerythrin; EF-hand, m 92.0 1.8 6.1E-05 30.0 9.6 62 59-122 104-165 (176)
173 3nso_A Protein S100-A3; EF-han 91.9 0.71 2.4E-05 31.3 7.1 67 56-122 9-82 (101)
174 2f33_A Calbindin; EF-hand, Ca2 91.9 0.39 1.3E-05 35.9 6.3 69 53-121 12-86 (263)
175 3pm8_A PFCDPK2, calcium-depend 91.8 0.36 1.2E-05 35.4 6.0 66 56-121 56-121 (197)
176 3sg6_A Gcamp2, myosin light ch 91.8 0.66 2.3E-05 39.7 8.3 67 56-122 311-377 (450)
177 1tr8_A Conserved protein (MTH1 91.7 0.22 7.6E-06 34.5 4.4 34 9-42 66-99 (102)
178 1s1e_A KV channel interacting 91.7 1.9 6.4E-05 32.3 10.0 112 10-122 37-154 (224)
179 2ct9_A Calcium-binding protein 91.6 0.55 1.9E-05 34.4 6.8 72 55-126 111-187 (208)
180 2hpk_A Photoprotein berovin; s 91.6 0.22 7.5E-06 36.4 4.5 65 56-120 35-108 (208)
181 2jul_A Calsenilin; EF-hand, ca 91.6 1.1 3.8E-05 34.1 8.7 108 10-122 77-194 (256)
182 2qac_A Myosin A tail domain in 91.6 0.73 2.5E-05 31.3 7.0 65 54-120 81-145 (146)
183 1bjf_A Neurocalcin delta; calc 91.5 2.7 9.2E-05 29.7 12.0 114 8-122 9-128 (193)
184 2lhi_A Calmodulin, serine/thre 91.5 0.71 2.4E-05 33.5 7.2 64 57-120 11-74 (176)
185 4eto_A Protein S100-A4; calciu 91.4 1 3.6E-05 29.6 7.4 67 56-122 9-82 (93)
186 2kax_A Protein S100-A5; EF-han 91.4 0.81 2.8E-05 29.7 6.8 65 56-122 9-79 (92)
187 3khe_A Calmodulin-like domain 91.4 0.86 2.9E-05 32.3 7.5 65 55-121 121-185 (191)
188 3i5g_B Myosin regulatory light 91.3 2.5 8.5E-05 29.8 9.9 118 3-121 9-148 (153)
189 2bec_A Calcineurin B homologou 91.2 0.58 2E-05 33.9 6.5 64 56-123 28-91 (202)
190 2be4_A Hypothetical protein LO 91.2 1.8 6.2E-05 32.3 9.5 68 52-119 6-83 (272)
191 2d8n_A Recoverin; structural g 91.2 0.52 1.8E-05 34.2 6.2 69 55-123 31-101 (207)
192 1bjf_A Neurocalcin delta; calc 91.0 1 3.5E-05 32.0 7.6 73 54-126 22-96 (193)
193 2l2e_A Calcium-binding protein 91.0 0.95 3.2E-05 32.2 7.4 110 9-121 10-127 (190)
194 1w7j_B Myosin light chain 1; m 90.9 0.31 1.1E-05 33.3 4.5 64 56-120 86-149 (151)
195 3zwh_A Protein S100-A4; Ca-bin 90.8 1.4 4.8E-05 29.8 7.8 67 56-122 12-85 (104)
196 2sas_A Sarcoplasmic calcium-bi 90.8 0.94 3.2E-05 31.7 7.1 65 56-122 104-168 (185)
197 1juo_A Sorcin; calcium-binding 90.8 1.4 5E-05 31.8 8.3 64 57-122 103-166 (198)
198 3ll8_B Calcineurin subunit B t 90.6 1.6 5.5E-05 29.5 8.0 84 58-141 39-125 (155)
199 3pm8_A PFCDPK2, calcium-depend 90.5 0.51 1.7E-05 34.6 5.6 67 55-121 127-195 (197)
200 2r2i_A Guanylyl cyclase-activa 90.5 3 0.0001 29.9 9.8 69 57-125 14-84 (198)
201 1g8i_A Frequenin, neuronal cal 90.4 1.4 4.9E-05 31.1 7.9 110 8-122 9-128 (190)
202 2l2e_A Calcium-binding protein 90.4 3.5 0.00012 29.1 12.7 70 55-124 23-94 (190)
203 2lbc_A Ubiquitin carboxyl-term 90.4 0.31 1.1E-05 34.5 4.2 40 8-48 78-117 (126)
204 3a8r_A Putative uncharacterize 90.4 0.54 1.8E-05 34.2 5.7 66 56-122 97-171 (179)
205 2ccm_A Calexcitin; EF hand, ca 90.3 1.4 4.8E-05 31.3 7.8 65 56-122 108-172 (191)
206 3mse_B Calcium-dependent prote 90.3 3.6 0.00012 29.1 10.2 62 57-120 108-177 (180)
207 1wgl_A TOLL-interacting protei 90.2 0.3 1E-05 30.5 3.5 40 9-48 10-50 (59)
208 1xk4_C Calgranulin B; S100 fam 89.6 1.9 6.5E-05 29.1 7.6 67 56-122 11-85 (113)
209 2hpk_A Photoprotein berovin; s 89.6 1.5 5E-05 31.9 7.5 62 59-122 130-191 (208)
210 1q80_A SCP, sarcoplasmic calci 89.5 0.75 2.6E-05 32.0 5.6 67 56-124 5-84 (174)
211 1eh2_A EPS15; calcium binding, 89.4 0.77 2.6E-05 31.2 5.5 64 56-122 14-77 (106)
212 2cp8_A NEXT to BRCA1 gene 1 pr 89.3 0.56 1.9E-05 28.9 4.2 39 10-48 11-49 (54)
213 3e3r_A Calcyphosin, calcyphosi 89.3 2.2 7.5E-05 30.5 8.3 78 56-133 108-195 (204)
214 3khe_A Calmodulin-like domain 89.3 0.42 1.4E-05 34.0 4.2 67 55-121 38-115 (191)
215 2lvv_A Flagellar calcium-bindi 89.3 1.2 4.2E-05 33.3 7.1 64 57-122 133-199 (226)
216 2ooa_A E3 ubiquitin-protein li 89.3 0.55 1.9E-05 28.7 4.0 34 9-43 12-45 (52)
217 1aip_C EF-TS, elongation facto 89.2 0.46 1.6E-05 36.6 4.6 39 8-46 3-41 (196)
218 2d9s_A CBL E3 ubiquitin protei 89.2 0.64 2.2E-05 28.5 4.3 38 9-47 10-47 (53)
219 1jba_A GCAP-2, protein (guanyl 89.1 2.5 8.4E-05 30.5 8.4 69 54-122 56-124 (204)
220 2aao_A CDPK, calcium-dependent 89.1 0.49 1.7E-05 32.8 4.4 64 56-121 98-161 (166)
221 2f33_A Calbindin; EF-hand, Ca2 89.1 2.6 9E-05 31.2 8.8 68 54-121 100-175 (263)
222 2zc2_A DNAD-like replication p 88.9 0.87 3E-05 29.2 5.2 72 57-131 4-77 (78)
223 1gjy_A Sorcin, CP-22, V19; cal 88.9 3.4 0.00012 28.7 8.8 75 54-135 39-115 (167)
224 4ae4_A Ubiquitin-associated pr 88.8 0.38 1.3E-05 34.0 3.6 89 3-93 3-93 (118)
225 1snl_A Nucleobindin 1, calnuc; 88.7 2 6.8E-05 28.1 7.1 65 57-121 20-100 (103)
226 2ggz_A Guanylyl cyclase-activa 88.7 0.21 7.2E-06 36.9 2.3 85 57-141 57-144 (211)
227 1otr_A Protein CUE2; protein-p 88.6 0.95 3.2E-05 27.2 4.7 40 8-47 4-44 (49)
228 1s1e_A KV channel interacting 88.4 1.5 5.2E-05 32.7 7.1 70 54-123 48-119 (224)
229 1psr_A Psoriasin, S100A7; EF-h 88.3 0.53 1.8E-05 31.3 3.9 63 56-121 9-80 (100)
230 1oqy_A HHR23A, UV excision rep 88.1 0.2 6.9E-06 42.0 2.0 45 3-48 320-364 (368)
231 2dna_A Unnamed protein product 88.1 0.9 3.1E-05 29.1 4.7 41 9-49 20-60 (67)
232 2jq6_A EH domain-containing pr 88.1 1.2 4.2E-05 32.0 6.1 65 55-122 49-113 (139)
233 2l4h_A Calcium and integrin-bi 88.1 1.9 6.3E-05 32.1 7.3 66 56-121 128-202 (214)
234 1vdl_A Ubiquitin carboxyl-term 87.8 0.58 2E-05 30.8 3.7 40 8-47 24-64 (80)
235 1juo_A Sorcin; calcium-binding 87.8 0.85 2.9E-05 33.0 5.1 65 56-121 32-101 (198)
236 1jfj_A Ehcabp, calcium-binding 87.7 1.2 4.1E-05 29.1 5.5 61 55-119 73-133 (134)
237 3dd4_A KV channel-interacting 87.7 2.2 7.6E-05 31.9 7.5 66 56-121 137-214 (229)
238 1xb2_B EF-TS, elongation facto 87.6 0.59 2E-05 38.0 4.4 39 8-46 4-42 (291)
239 2h2k_A Protein S100-A13; calci 87.6 2.3 7.7E-05 28.8 6.9 65 56-122 21-91 (106)
240 2zfd_A Calcineurin B-like prot 87.4 5.4 0.00019 29.4 9.6 65 57-121 85-150 (226)
241 2ehb_A Calcineurin B-like prot 87.4 5.1 0.00017 28.8 9.2 130 10-141 20-164 (207)
242 1dgu_A Calcium-saturated CIB; 87.2 2.9 9.8E-05 29.5 7.6 47 72-122 43-90 (183)
243 1g8i_A Frequenin, neuronal cal 87.2 1.8 6.1E-05 30.6 6.5 71 54-124 22-94 (190)
244 1fpw_A Yeast frequenin, calciu 87.2 3.6 0.00012 29.0 8.1 72 54-125 22-95 (190)
245 2ggz_A Guanylyl cyclase-activa 87.2 6.1 0.00021 28.7 9.6 71 55-125 17-89 (211)
246 2hps_A Coelenterazine-binding 86.9 2 6.9E-05 30.2 6.6 55 68-122 112-167 (186)
247 3dd4_A KV channel-interacting 86.8 1.9 6.4E-05 32.3 6.7 67 56-122 101-167 (229)
248 2kyc_A Parvalbumin-3, parvalbu 86.7 0.15 5.2E-06 33.4 0.4 65 56-120 40-107 (108)
249 3nxa_A Protein S100-A16; S100 86.6 3.4 0.00012 27.5 7.3 79 56-134 10-96 (100)
250 3i5g_C Myosin catalytic light 85.9 3.1 0.00011 29.5 7.2 65 57-122 9-75 (159)
251 1aua_A Phosphatidylinositol tr 85.7 1 3.6E-05 35.4 4.9 42 3-44 25-73 (296)
252 1ij5_A Plasmodial specific LAV 85.6 1.6 5.5E-05 35.0 6.1 49 73-121 269-318 (323)
253 3bow_A Calpain-2 catalytic sub 85.4 2.4 8.2E-05 37.9 7.6 66 56-122 531-604 (714)
254 3q8g_A CRAL-TRIO domain-contai 85.1 1.1 3.6E-05 36.3 4.8 43 3-45 34-83 (320)
255 3cs1_A Flagellar calcium-bindi 84.6 1.5 5.2E-05 32.4 5.1 64 57-122 130-196 (219)
256 1k94_A Grancalcin; penta-EF-ha 84.5 3.9 0.00013 28.3 7.0 78 53-137 36-115 (165)
257 1s6i_A CDPK, calcium-dependent 84.4 3.9 0.00013 29.5 7.2 66 56-123 81-146 (188)
258 2ehb_A Calcineurin B-like prot 84.2 5 0.00017 28.8 7.8 68 55-122 109-184 (207)
259 2crn_A Ubash3A protein; compac 84.0 0.87 3E-05 28.7 3.0 39 9-48 10-49 (64)
260 3mwu_A Calmodulin-domain prote 83.9 7 0.00024 32.4 9.4 82 56-137 330-426 (486)
261 3sg6_A Gcamp2, myosin light ch 83.8 3.1 0.0001 35.6 7.2 65 56-120 384-448 (450)
262 2zfd_A Calcineurin B-like prot 83.8 5.5 0.00019 29.4 8.0 67 56-122 121-195 (226)
263 1r5l_A Alpha-TTP, protein (alp 83.6 0.55 1.9E-05 36.1 2.4 42 3-44 3-54 (262)
264 3i5g_C Myosin catalytic light 83.1 9.6 0.00033 26.8 8.8 120 2-121 1-151 (159)
265 3a4u_B Multiple coagulation fa 82.7 2.2 7.6E-05 29.8 5.1 64 55-119 66-142 (143)
266 2be4_A Hypothetical protein LO 82.1 4.3 0.00015 30.1 6.8 68 54-121 101-176 (272)
267 1dgu_A Calcium-saturated CIB; 81.9 1.7 5.8E-05 30.8 4.3 66 56-121 97-171 (183)
268 3k21_A PFCDPK3, calcium-depend 81.8 7.5 0.00026 27.9 7.9 30 56-85 121-150 (191)
269 4drw_A Protein S100-A10/annexi 81.6 3.2 0.00011 29.0 5.5 66 57-123 15-85 (121)
270 2dhy_A CUE domain-containing p 81.5 1.6 5.6E-05 27.8 3.6 41 7-47 17-58 (67)
271 2lhi_A Calmodulin, serine/thre 81.1 4.3 0.00015 29.2 6.3 118 3-121 4-147 (176)
272 3nyv_A Calmodulin-domain prote 80.9 3.7 0.00013 33.9 6.6 67 56-122 334-411 (484)
273 2jul_A Calsenilin; EF-hand, ca 80.6 6.8 0.00023 29.6 7.6 67 55-121 163-241 (256)
274 3u0k_A Rcamp; fluorescent prot 80.2 4.8 0.00016 34.5 7.1 65 56-120 374-438 (440)
275 3q5i_A Protein kinase; CDPK, m 80.2 4.5 0.00016 33.8 7.0 67 56-122 354-428 (504)
276 1sjj_A Actinin; 3-helix bundle 80.0 2.5 8.5E-05 38.0 5.6 79 57-135 725-805 (863)
277 3i5g_B Myosin regulatory light 79.5 11 0.00038 26.3 8.0 38 57-94 16-53 (153)
278 1eg3_A Dystrophin; EF-hand lik 79.0 6.1 0.00021 31.4 7.0 67 54-121 165-242 (261)
279 3cs1_A Flagellar calcium-bindi 78.0 2.3 7.9E-05 31.4 4.1 65 56-120 47-121 (219)
280 3a8r_A Putative uncharacterize 77.0 11 0.00037 27.1 7.4 70 55-125 57-131 (179)
281 2lvv_A Flagellar calcium-bindi 76.7 1.9 6.6E-05 32.1 3.3 63 56-118 50-122 (226)
282 3mwu_A Calmodulin-domain prote 76.2 1.5 5E-05 36.6 2.7 68 55-122 415-482 (486)
283 2lva_A Ubiquitin carboxyl-term 77.7 0.55 1.9E-05 33.7 0.0 41 8-48 18-59 (129)
284 2ct9_A Calcium-binding protein 75.9 5.3 0.00018 28.9 5.5 63 57-123 29-91 (208)
285 3bow_A Calpain-2 catalytic sub 75.7 5.6 0.00019 35.5 6.5 65 57-122 605-669 (714)
286 1ij5_A Plasmodial specific LAV 74.5 2.3 8E-05 34.0 3.4 62 58-121 189-251 (323)
287 1olm_A SEC14-like protein 2; l 74.0 4.2 0.00014 33.4 5.0 43 3-45 7-57 (403)
288 1pul_A Hypothetical protein C3 73.7 20 0.0007 25.4 7.8 66 55-122 20-93 (125)
289 1wlm_A Protein CGI-38; structu 72.9 11 0.00039 27.5 6.5 69 53-122 11-89 (151)
290 1pva_A Parvalbumin; calcium bi 72.7 16 0.00053 23.3 9.8 79 54-137 7-90 (110)
291 3dv9_A Beta-phosphoglucomutase 72.1 3.2 0.00011 30.1 3.4 70 73-142 165-245 (247)
292 3q5i_A Protein kinase; CDPK, m 72.0 6.8 0.00023 32.7 5.8 66 56-123 434-499 (504)
293 1qxp_A MU-like calpain; M-calp 71.9 10 0.00036 34.4 7.4 65 57-122 607-671 (900)
294 3lij_A Calcium/calmodulin depe 71.7 4.1 0.00014 34.0 4.4 80 56-135 345-433 (494)
295 2i7a_A Calpain 13; calcium-dep 71.6 16 0.00053 26.2 7.1 76 54-137 43-124 (174)
296 4ae4_A Ubiquitin-associated pr 71.5 5.2 0.00018 28.1 4.2 37 10-47 78-114 (118)
297 1oqy_A HHR23A, UV excision rep 70.6 3.7 0.00013 34.2 3.8 40 7-47 167-206 (368)
298 2jrf_A Tubulin polymerization- 70.5 17 0.00056 27.6 7.1 69 53-122 4-82 (184)
299 1p3q_Q VPS9P, vacuolar protein 70.2 7.9 0.00027 23.6 4.3 40 7-46 11-51 (54)
300 3lij_A Calcium/calmodulin depe 69.2 13 0.00046 30.7 7.1 66 56-123 425-490 (494)
301 3nyv_A Calmodulin-domain prote 68.2 19 0.00066 29.5 7.8 66 56-121 381-446 (484)
302 1bu3_A Calcium-binding protein 68.1 20 0.00069 22.7 9.3 80 53-137 6-90 (109)
303 1rro_A RAT oncomodulin; calciu 66.6 22 0.00074 22.5 8.3 79 53-136 5-88 (108)
304 1rwy_A Parvalbumin alpha; EF-h 66.0 22 0.00076 22.4 8.6 79 54-137 6-89 (109)
305 3h4s_E KCBP interacting Ca2+-b 64.6 9.3 0.00032 25.9 4.4 79 59-137 5-86 (135)
306 2di0_A Activating signal coint 64.6 12 0.00041 24.1 4.5 41 9-49 14-55 (71)
307 3ohm_B 1-phosphatidylinositol- 63.9 16 0.00053 33.9 6.9 70 56-125 222-305 (885)
308 1djx_A PLC-D1, phosphoinositid 63.1 2.9 0.0001 37.0 1.8 79 55-137 45-126 (624)
309 3k6g_A Telomeric repeat-bindin 63.1 35 0.0012 23.6 7.0 59 8-68 13-86 (111)
310 4ex6_A ALNB; modified rossman 62.0 11 0.00037 27.1 4.6 63 73-135 160-233 (237)
311 2pvb_A Protein (parvalbumin); 60.7 29 0.00098 21.9 8.9 79 54-137 6-89 (108)
312 2ou3_A Tellurite resistance pr 60.2 43 0.0015 23.8 7.9 90 3-96 45-136 (161)
313 4gvq_A Methenyltetrahydrometha 60.1 0.41 1.4E-05 39.4 -3.9 64 31-96 93-167 (316)
314 2kld_A Polycystin-2; PC2, PKD2 59.2 2.1 7.2E-05 29.4 0.2 49 72-122 61-109 (123)
315 2qsf_X RAD23, UV excision repa 57.8 7.6 0.00026 29.1 3.1 28 20-47 141-168 (171)
316 1qlm_A Methenyltetrahydrometha 57.7 0.48 1.7E-05 38.9 -3.8 67 27-95 87-166 (316)
317 2keb_A DNA polymerase subunit 57.2 19 0.00064 24.7 4.7 48 72-122 24-71 (101)
318 2juj_A E3 ubiquitin-protein li 57.2 18 0.00062 22.1 4.1 40 7-47 6-45 (56)
319 1ku1_A ARF guanine-nucleotide 57.1 55 0.0019 25.3 8.1 39 7-45 22-63 (230)
320 3m9l_A Hydrolase, haloacid deh 57.0 7.6 0.00026 27.5 2.9 64 73-136 127-197 (205)
321 2l4h_A Calcium and integrin-bi 56.3 52 0.0018 23.9 7.6 128 9-141 33-183 (214)
322 1ufz_A Hypothetical protein BA 55.6 11 0.00039 25.0 3.3 46 3-48 25-76 (83)
323 1jw2_A Hemolysin expression mo 53.9 9.7 0.00033 24.6 2.7 34 110-145 6-39 (72)
324 1jms_A Terminal deoxynucleotid 52.9 60 0.0021 26.8 8.1 100 11-132 45-150 (381)
325 1djx_A PLC-D1, phosphoinositid 52.6 36 0.0012 30.0 7.0 67 56-123 79-151 (624)
326 2hps_A Coelenterazine-binding 50.8 9.3 0.00032 26.6 2.5 31 56-86 13-43 (186)
327 5pal_A Parvalbumin; calcium-bi 50.5 44 0.0015 21.0 9.3 80 53-137 5-89 (109)
328 2i5u_A DNAD domain protein; st 49.5 15 0.00053 23.5 3.2 57 73-131 18-82 (83)
329 3qr0_A Phospholipase C-beta (P 49.0 22 0.00074 32.7 5.1 68 56-124 228-311 (816)
330 2pjp_A Selenocysteine-specific 48.1 15 0.00051 25.0 3.2 21 12-32 83-103 (121)
331 2ihm_A POL MU, DNA polymerase 47.6 79 0.0027 25.8 8.0 99 11-131 26-130 (360)
332 3mc1_A Predicted phosphatase, 47.0 8.8 0.0003 27.3 1.9 65 73-137 142-217 (226)
333 2oo9_A E3 ubiquitin-protein li 46.6 33 0.0011 20.2 3.9 37 9-46 5-41 (46)
334 3qxg_A Inorganic pyrophosphata 46.3 14 0.00048 26.8 2.9 65 73-137 166-241 (243)
335 1nri_A Hypothetical protein HI 45.8 7.7 0.00026 30.9 1.5 36 12-47 248-283 (306)
336 3fs7_A Parvalbumin, thymic; ca 45.2 55 0.0019 20.5 9.3 79 54-137 7-90 (109)
337 2h5n_A Hypothetical protein PG 43.7 78 0.0027 21.8 7.9 92 3-97 34-127 (133)
338 2zkm_X 1-phosphatidylinositol- 43.1 53 0.0018 29.9 6.7 67 56-122 218-298 (799)
339 3v22_V Ribosome modulation fac 42.3 12 0.00042 23.4 1.7 18 104-121 29-46 (61)
340 2p6v_A Transcription initiatio 42.1 26 0.00089 24.5 3.5 52 91-147 44-100 (114)
341 1tte_A Ubiquitin-conjugating e 41.3 34 0.0012 26.1 4.5 32 7-39 168-199 (215)
342 2es9_A Putative cytoplasmic pr 40.8 9.9 0.00034 26.1 1.2 20 72-91 34-53 (115)
343 3kw6_A 26S protease regulatory 39.9 59 0.002 19.9 4.9 67 54-122 3-73 (78)
344 3zq7_A KDP operon transcriptio 39.8 61 0.0021 20.7 5.1 56 87-143 26-82 (102)
345 1qxp_A MU-like calpain; M-calp 38.2 5.2 0.00018 36.5 -0.8 68 62-136 809-877 (900)
346 2vn2_A DNAD, chromosome replic 37.8 52 0.0018 22.5 4.7 64 73-140 15-78 (128)
347 2pib_A Phosphorylated carbohyd 37.8 21 0.0007 24.7 2.6 63 73-137 140-215 (216)
348 3ltl_A Brefeldin A-inhibited g 37.7 1.3E+02 0.0046 22.8 8.9 117 6-122 16-179 (211)
349 3bz6_A UPF0502 protein pspto_2 37.5 19 0.00066 27.2 2.4 55 81-140 99-154 (183)
350 1y9i_A Low temperature require 37.0 35 0.0012 25.7 3.8 44 76-121 11-54 (178)
351 1lva_A Selenocysteine-specific 36.9 25 0.00087 27.1 3.2 22 11-32 218-239 (258)
352 2kld_A Polycystin-2; PC2, PKD2 36.3 25 0.00086 23.7 2.8 74 56-137 11-89 (123)
353 1r8s_E ARNO; protein transport 34.4 1.3E+02 0.0043 22.8 6.7 20 103-122 151-171 (203)
354 2v79_A DNA replication protein 34.4 66 0.0023 22.5 4.8 64 73-140 15-78 (135)
355 4eek_A Beta-phosphoglucomutase 34.3 29 0.00098 25.3 3.0 63 75-137 170-247 (259)
356 3iru_A Phoshonoacetaldehyde hy 34.2 11 0.00039 27.5 0.7 70 73-142 168-272 (277)
357 2z9m_A Response regulator YYCF 34.2 81 0.0028 21.0 5.1 60 83-143 30-90 (120)
358 3ro3_B Minsc, peptide of prote 33.4 20 0.00069 17.7 1.3 15 73-87 4-18 (22)
359 2lbc_A Ubiquitin carboxyl-term 33.1 24 0.00084 24.3 2.3 37 10-47 5-42 (126)
360 3he4_B Synzip5; heterodimeric 32.8 39 0.0013 19.2 2.7 17 124-140 2-18 (46)
361 3hx3_A Retinaldehyde-binding p 32.8 57 0.0019 25.8 4.7 46 22-67 91-143 (316)
362 3h93_A Thiol:disulfide interch 32.7 33 0.0011 24.4 3.0 39 55-93 87-125 (192)
363 3twe_A Alpha4H; unknown functi 31.7 37 0.0013 17.3 2.2 16 127-142 10-25 (27)
364 3hd5_A Thiol:disulfide interch 31.6 37 0.0013 24.1 3.2 38 57-94 88-125 (195)
365 2zxj_A Transcriptional regulat 31.6 99 0.0034 21.0 5.3 69 74-143 21-90 (120)
366 2hwv_A DNA-binding response re 31.2 81 0.0028 21.2 4.8 54 89-143 43-97 (121)
367 3omt_A Uncharacterized protein 31.1 57 0.002 19.2 3.6 21 73-93 47-67 (73)
368 1x2i_A HEF helicase/nuclease; 30.9 85 0.0029 18.7 4.4 62 7-69 8-69 (75)
369 3kzq_A Putative uncharacterize 30.8 38 0.0013 24.5 3.2 38 56-93 105-142 (208)
370 2jrm_A Ribosome modulation fac 30.7 23 0.00079 22.4 1.6 18 104-121 29-46 (65)
371 3l09_A Putative transcriptiona 30.4 28 0.00095 27.6 2.5 57 36-95 8-64 (266)
372 3avx_A Elongation factor TS, e 30.3 4.3 0.00015 39.2 -2.7 37 10-46 7-43 (1289)
373 3rjp_A COVR; winged helix-turn 30.3 71 0.0024 20.2 4.1 55 89-144 22-77 (96)
374 2jqt_A H-NS/STPA-binding prote 30.2 19 0.00066 23.1 1.2 32 111-144 2-33 (71)
375 2jzy_A Transcriptional regulat 30.0 67 0.0023 21.2 4.1 56 87-143 26-82 (112)
376 1rfz_A Hypothetical protein AP 29.7 54 0.0019 24.4 3.8 44 76-121 13-56 (168)
377 1zx4_A P1 PARB, plasmid partit 29.5 81 0.0028 23.7 4.8 53 14-68 29-81 (192)
378 3t76_A VANU, transcriptional r 29.5 33 0.0011 22.1 2.3 22 73-94 62-83 (88)
379 3gha_A Disulfide bond formatio 29.5 83 0.0028 22.9 4.9 39 56-94 98-137 (202)
380 4e71_A Plexin-B2, MM1; transme 29.3 24 0.00082 24.5 1.7 16 120-135 29-44 (111)
381 3hz8_A Thiol:disulfide interch 29.2 39 0.0013 24.4 2.9 37 58-94 91-128 (193)
382 2l9b_A MRNA 3'-END-processing 29.1 25 0.00085 24.4 1.7 37 4-41 49-86 (109)
383 2in3_A Hypothetical protein; D 28.9 44 0.0015 24.1 3.2 83 56-140 112-211 (216)
384 1b43_A Protein (FEN-1); nuclea 28.9 1.5E+02 0.005 23.7 6.6 69 18-94 242-316 (340)
385 2bcq_A DNA polymerase lambda; 28.4 84 0.0029 25.4 5.1 99 12-133 23-126 (335)
386 4fp9_B Mterf domain-containing 28.1 1.3E+02 0.0043 24.4 6.1 17 78-94 80-96 (335)
387 3q8k_A Flap endonuclease 1; he 28.1 2.3E+02 0.008 22.7 8.0 82 10-93 220-320 (341)
388 3a1y_A 50S ribosomal protein P 28.0 76 0.0026 19.1 3.7 36 72-107 15-50 (58)
389 3kuz_A Plexin-C1; structural g 27.8 26 0.0009 24.9 1.7 17 121-137 45-61 (126)
390 4fxe_A Antitoxin RELB; toxin/a 27.1 35 0.0012 22.0 2.1 30 78-107 15-44 (79)
391 2lbf_A 60S acidic ribosomal pr 27.1 1.1E+02 0.0037 19.2 4.4 37 72-108 21-57 (69)
392 2cnr_A FAS, ACP, acyl carrier 27.1 1.1E+02 0.0036 18.4 4.7 69 57-135 10-78 (82)
393 4e74_A Plexin-A4; RBD, structu 27.0 27 0.00093 24.5 1.6 16 120-135 32-47 (117)
394 2qho_B E3 ubiquitin-protein li 26.9 63 0.0021 19.3 3.0 39 9-47 10-49 (53)
395 1y7y_A C.AHDI; helix-turn-heli 26.5 81 0.0028 18.2 3.7 21 73-93 52-72 (74)
396 1r4w_A Glutathione S-transfera 26.2 63 0.0021 23.8 3.7 38 56-93 115-152 (226)
397 3l9s_A Thiol:disulfide interch 26.1 46 0.0016 24.1 2.9 34 60-94 92-125 (191)
398 1gxq_A PHOB, phosphate regulon 26.0 1.2E+02 0.0041 19.5 4.8 56 87-143 29-85 (106)
399 3ouv_A Serine/threonine protei 25.8 33 0.0011 20.8 1.8 23 17-39 12-34 (71)
400 2keb_A DNA polymerase subunit 25.8 63 0.0021 22.1 3.2 57 41-100 14-71 (101)
401 3kz3_A Repressor protein CI; f 25.7 1.1E+02 0.0036 18.4 4.2 24 73-96 51-74 (80)
402 1sjj_A Actinin; 3-helix bundle 25.5 2.4E+02 0.0082 25.0 8.0 67 54-120 758-824 (863)
403 3h6n_A Plexin-D1; structural g 25.3 30 0.001 24.6 1.6 16 120-135 22-37 (127)
404 3kbb_A Phosphorylated carbohyd 25.2 53 0.0018 23.1 3.0 35 73-107 140-181 (216)
405 2nr3_A Hypothetical protein; A 25.2 17 0.00057 27.5 0.2 55 81-140 99-154 (183)
406 2ewt_A BLDD, putative DNA-bind 25.2 40 0.0014 19.6 2.0 21 73-93 49-69 (71)
407 2k4j_A Putative transcriptiona 25.1 1E+02 0.0035 20.4 4.4 54 88-142 40-94 (115)
408 3b7h_A Prophage LP1 protein 11 24.8 59 0.002 19.2 2.8 21 73-93 47-67 (78)
409 2r2o_A Plexin-B1; effector dom 24.6 37 0.0013 24.5 2.0 18 119-136 45-62 (138)
410 3umg_A Haloacid dehalogenase; 24.3 67 0.0023 22.7 3.5 63 74-136 170-248 (254)
411 2krk_A 26S protease regulatory 24.3 1.4E+02 0.0047 18.9 4.7 69 52-122 9-81 (86)
412 3rpp_A Glutathione S-transfera 24.3 70 0.0024 23.9 3.7 38 56-93 115-152 (234)
413 1wix_A HOOK homolog 1, RSGI RU 24.3 62 0.0021 23.5 3.3 43 98-141 117-159 (164)
414 2kvv_A Putative excisionase; D 24.2 64 0.0022 21.0 2.9 24 12-36 13-36 (78)
415 1jgs_A Multiple antibiotic res 24.2 92 0.0031 20.3 4.0 53 79-140 23-75 (138)
416 3bs3_A Putative DNA-binding pr 24.0 91 0.0031 18.1 3.6 21 73-93 49-69 (76)
417 3op9_A PLI0006 protein; struct 23.8 62 0.0021 21.0 3.0 60 73-140 48-111 (114)
418 3gzm_A Acyl carrier protein; h 23.8 1.3E+02 0.0044 18.2 5.6 70 57-136 8-77 (81)
419 3fz5_A Possible 2-hydroxychrom 23.5 46 0.0016 24.2 2.4 38 56-93 109-146 (202)
420 2cos_A Serine/threonine protei 23.5 82 0.0028 19.1 3.1 37 6-43 7-44 (54)
421 2pmu_A Response regulator PHOP 23.5 93 0.0032 20.3 3.8 55 88-143 33-88 (110)
422 3cnh_A Hydrolase family protei 23.2 1E+02 0.0036 21.1 4.3 20 74-93 142-161 (200)
423 3q9v_A DNA-binding response re 23.2 1.3E+02 0.0045 20.6 4.7 68 74-142 45-113 (133)
424 1zl0_A Hypothetical protein PA 22.9 29 0.00098 28.0 1.3 82 24-106 35-133 (311)
425 3feu_A Putative lipoprotein; a 22.2 47 0.0016 23.9 2.2 39 55-93 85-126 (185)
426 3g2s_A C-terminal fragment of 22.1 2.1E+02 0.0073 20.2 6.0 85 57-141 10-124 (149)
427 1aor_A Aldehyde ferredoxin oxi 21.7 71 0.0024 28.1 3.7 57 78-137 332-389 (605)
428 1hyw_A GPW, head-TO-tail joini 21.7 80 0.0027 19.8 3.0 20 123-142 36-55 (68)
429 1opc_A OMPR, OMPRC; transcript 21.6 73 0.0025 20.7 3.0 55 88-143 30-85 (110)
430 1rxw_A Flap structure-specific 21.5 1.3E+02 0.0043 24.0 4.9 69 20-94 242-316 (336)
431 3geh_A MNME, tRNA modification 21.5 63 0.0021 27.2 3.2 14 105-118 115-128 (462)
432 3gyk_A 27KDA outer membrane pr 21.3 1.2E+02 0.004 20.8 4.2 63 73-139 97-173 (175)
433 2r1j_L Repressor protein C2; p 21.0 93 0.0032 17.5 3.1 21 73-93 44-64 (68)
434 3fbl_A Putative uncharacterize 21.0 72 0.0025 20.1 2.6 20 10-29 55-74 (82)
435 3s8q_A R-M controller protein; 20.7 76 0.0026 19.0 2.7 28 73-100 50-77 (82)
436 2rem_A Disulfide oxidoreductas 20.4 76 0.0026 22.2 3.0 37 57-93 89-128 (193)
437 1tjo_A Iron-rich DPSA-homolog 20.4 1.5E+02 0.0053 21.2 4.8 92 11-119 30-122 (182)
438 4dox_A Coat protein; all helix 20.3 2.4E+02 0.0082 21.8 6.0 57 76-133 39-109 (226)
439 2cxc_A NUSA; transcription ter 20.3 59 0.002 23.3 2.4 23 3-25 6-28 (144)
440 3gl5_A Putative DSBA oxidoredu 20.2 99 0.0034 23.2 3.8 82 55-141 116-215 (239)
441 1vku_A Acyl carrier protein; T 20.1 1.9E+02 0.0065 18.8 5.9 75 57-142 20-94 (100)
442 3aji_B S6C, proteasome (prosom 20.0 1.6E+02 0.0055 18.0 5.4 65 58-124 5-73 (83)
No 1
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=100.00 E-value=1.2e-47 Score=313.32 Aligned_cols=146 Identities=14% Similarity=0.316 Sum_probs=133.6
Q ss_pred CCCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC----------CCcCCHHHHHHHHHHhcCCCC
Q 031969 2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS----------KSLTDTRHLEELYNRYKDPYL 71 (150)
Q Consensus 2 ~~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~----------~~~~~~~~l~~lFd~Y~d~~~ 71 (150)
++|++.++++|+||+++||+++++|++||++|+|||+.|+++||+++.. .++++.++|++||++|+ ++
T Consensus 9 ~~l~~~~~~~i~qF~~iTg~~~~~A~~~L~~~~WdLe~Al~~ff~~~~~~~~~~~~~~~~~~~~~~~l~~lF~~Y~--~~ 86 (270)
T 3bq3_A 9 RKDASPEQEAIESFTSLTKCDPKVSRKYLQRNHWNINYALNDYYDKEIGTFTDEVSTVAHPPVYPKELTQVFEHYI--NN 86 (270)
T ss_dssp ----CHHHHHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHHHHCC--------CCCCCSSCHHHHHHHHHHC--BT
T ss_pred hhhccchHHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHhCccccccccccccccccccHHHHHHHHHHhc--CC
Confidence 3788899999999999999999999999999999999999999988754 23568899999999999 46
Q ss_pred CccchHHHHHHHhhcCCCCCcHHHHHHHHhhccccc-ccccHHHHHHHhHHcCCCCHHHHHHHHHHHHH-HcCCCccccC
Q 031969 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATM-CEFSKQEFIGGLQSLGIDSLDKFRERISFMRA-ELKDERTCTG 149 (150)
Q Consensus 72 d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~-g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~-~l~~~~~Fk~ 149 (150)
+.||+||+++||+||||+|+|+++|||||+|+|++| |+|||+||++||+++|||||++||++|+.|++ .+.|+.+||+
T Consensus 87 d~I~~dG~~~~~~DLgv~ped~~~Lvla~~l~a~~~~g~ftr~ef~~G~~~l~~dsi~~lk~~l~~l~~~~~~d~~~Fk~ 166 (270)
T 3bq3_A 87 NLFDIDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWFMQGCSTISDMQECIKTLDVKLHEDLQYFTQ 166 (270)
T ss_dssp TBCCHHHHHHHHHHHTCCTTCHHHHHHHHHTTCSCTTSCCCHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CccCHhhHHHHHHHcCCChhhHHHHHHHHHcCCCccCceeeHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHccCHHHHHH
Confidence 799999999999999999999999999999999999 99999999999999999999999999999999 4588888874
No 2
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=100.00 E-value=1.9e-35 Score=231.97 Aligned_cols=97 Identities=39% Similarity=0.775 Sum_probs=93.1
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHH
Q 031969 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE 132 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~ 132 (150)
+++.++|++||++|+||+++.||+||+++||+||||+|+|+++|||||+|+|++||+|||+||++||+++||||+++||+
T Consensus 3 ~~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~ 82 (199)
T 3kev_A 3 RADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQVDSLEKLKR 82 (199)
T ss_dssp -CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHTTCCSHHHHHH
T ss_pred ccCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHhCCCCHHHHHH
Confidence 56899999999999999767999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccccC
Q 031969 133 RISFMRAELKDERTCTG 149 (150)
Q Consensus 133 ~l~~l~~~l~~~~~Fk~ 149 (150)
+|++|+++|+|+.+||+
T Consensus 83 ~l~~l~~~l~d~~~Fk~ 99 (199)
T 3kev_A 83 KLSSLRKEIEDPSKFRA 99 (199)
T ss_dssp HHHHHHHHTTSHHHHHH
T ss_pred HHHHHHHHccCHHHHHH
Confidence 99999999999999984
No 3
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.6e-35 Score=232.72 Aligned_cols=97 Identities=38% Similarity=0.722 Sum_probs=90.9
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHH
Q 031969 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE 132 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~ 132 (150)
+++.++|++||++|+|+++|.||++|+++||+||||+|+|+++|||||+|+|++||+|||+||++||+++||||+++||+
T Consensus 2 ~~~~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l~~dsi~~lk~ 81 (221)
T 4gba_A 2 SSSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICA 81 (221)
T ss_dssp ----CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHTCSSHHHHHH
T ss_pred CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHhCcCCHHHHHH
Confidence 45778999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccccC
Q 031969 133 RISFMRAELKDERTCTG 149 (150)
Q Consensus 133 ~l~~l~~~l~~~~~Fk~ 149 (150)
+|+.|+++|+|+.+||+
T Consensus 82 ~l~~L~~~l~d~~~Fk~ 98 (221)
T 4gba_A 82 RFPSLLTEAKQEDKFKD 98 (221)
T ss_dssp HHHHHHHHTTSHHHHHH
T ss_pred HHHHHHHHccCHHHHHH
Confidence 99999999988899984
No 4
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=100.00 E-value=5.5e-35 Score=229.44 Aligned_cols=95 Identities=46% Similarity=0.877 Sum_probs=91.5
Q ss_pred CHHHHHHHHHHhcCCC-CCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHH
Q 031969 55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRER 133 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~ 133 (150)
+.++|++||++|+||+ +|.||+||+++||+||||+|+|+++|||||+|+|++||+|||+||++||+++||||+++||++
T Consensus 2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~~ 81 (200)
T 3tdu_A 2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQ 81 (200)
T ss_dssp CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHTCSSHHHHHHT
T ss_pred CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHccccHHHHHHH
Confidence 5789999999999986 489999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccC
Q 031969 134 ISFMRAELKDERTCTG 149 (150)
Q Consensus 134 l~~l~~~l~~~~~Fk~ 149 (150)
|++|+++|+|+.+||+
T Consensus 82 l~~l~~~l~d~~~Fk~ 97 (200)
T 3tdu_A 82 IPKMEQELKEPGRFKD 97 (200)
T ss_dssp HHHHHHHTTSHHHHHH
T ss_pred HHHHHHHccCHHHHHH
Confidence 9999999999999984
No 5
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=4.4e-15 Score=97.67 Aligned_cols=52 Identities=23% Similarity=0.436 Sum_probs=47.6
Q ss_pred CCCCCcchHHHHHHHHHHhC-CCHHHHHHHHHhCCCCchhhhhhhhccCCCCC
Q 031969 1 MHKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYSQPQSKS 52 (150)
Q Consensus 1 m~~l~~~~~~~i~~F~~iT~-~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~~~ 52 (150)
|++|+++++++|.+|++||| +++.+|++||+.++|||+.||+.||+...+.+
T Consensus 11 ~~~Ls~~~~e~i~qF~~ITg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~~~p 63 (67)
T 2dam_A 11 ERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGSG 63 (67)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSCSSC
T ss_pred hhhcChhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 56899999999999999999 89999999999999999999999998865433
No 6
>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=4e-14 Score=91.68 Aligned_cols=48 Identities=35% Similarity=0.405 Sum_probs=44.8
Q ss_pred CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC
Q 031969 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS 50 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~ 50 (150)
.|++.++++|.+|++|||+++.+|++||+.++|||+.||+.||+.+..
T Consensus 10 ~~s~~~~e~i~qF~~iTg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~~ 57 (62)
T 2dal_A 10 AASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGS 57 (62)
T ss_dssp SSCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTSCHHHHHHHHHHSCCC
T ss_pred hcCccHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence 578889999999999999999999999999999999999999988643
No 7
>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3
Probab=99.47 E-value=4.7e-14 Score=85.68 Aligned_cols=43 Identities=35% Similarity=0.618 Sum_probs=40.2
Q ss_pred cchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 6 ~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
+.++++|.+|++|||+++.+|++||+.++|||+.||+.||+++
T Consensus 3 ~~~~~~i~~F~~iTg~~~~~A~~~L~~~~wdle~Ai~~ff~~~ 45 (46)
T 1v92_A 3 EERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG 45 (46)
T ss_dssp THHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 3578899999999999999999999999999999999999875
No 8
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=99.41 E-value=1.1e-13 Score=84.29 Aligned_cols=42 Identities=24% Similarity=0.383 Sum_probs=37.2
Q ss_pred CcchHHHHHHHHHHhCCCH-HHHHHHHHhCCCCchhhhhhhhc
Q 031969 5 SRSNRDKLQQFVSITGASE-KAALQALKASDWHLEGAFDVFYS 46 (150)
Q Consensus 5 ~~~~~~~i~~F~~iT~~~~-~~A~~~L~~~~w~le~Ai~~f~~ 46 (150)
+.++.++|.+|+++||+++ ..|++||++|||||+.|++.||.
T Consensus 2 ~~d~de~ia~F~~iTG~~d~~~A~~~Lea~nWDLe~Av~~f~~ 44 (45)
T 3e21_A 2 SMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIP 44 (45)
T ss_dssp -CCHHHHHHHHHHHHCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred cccHHHHHHHHHHHHCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence 4578999999999999996 99999999999999999999984
No 9
>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=2.1e-12 Score=84.62 Aligned_cols=40 Identities=30% Similarity=0.578 Sum_probs=38.3
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969 10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ 49 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~ 49 (150)
++|.+|++|||+++.+|++||+.++|||+.||+.||+++.
T Consensus 19 ~~i~qF~~iTg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~ 58 (66)
T 2dzl_A 19 VMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETN 58 (66)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHTCSC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 7899999999999999999999999999999999998864
No 10
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=98.41 E-value=3.9e-07 Score=57.76 Aligned_cols=45 Identities=20% Similarity=0.260 Sum_probs=42.5
Q ss_pred CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
+||+.|+++|.+|+..||.+..-+..||+.++||++.|+..|-+.
T Consensus 1 ~l~~~q~~mv~~~s~~T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~ 45 (57)
T 2jp7_A 1 RLNPVQLELLNKLHLETKLNAEYTFMLAEQSNWNYEVAIKGFQSS 45 (57)
T ss_dssp CCCHHHHHHHHHHHHHHCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999663
No 11
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=98.36 E-value=5.1e-07 Score=57.55 Aligned_cols=44 Identities=20% Similarity=0.397 Sum_probs=41.7
Q ss_pred CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~ 46 (150)
-||+.|+++|.+|+..||.+..-+..+|+.++||++.|+..|-+
T Consensus 2 ~ls~~q~~mv~~~s~~Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~ 45 (59)
T 1oai_A 2 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTH 45 (59)
T ss_dssp CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999965
No 12
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=98.26 E-value=4.3e-07 Score=75.50 Aligned_cols=42 Identities=40% Similarity=0.677 Sum_probs=38.7
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
...+++++|.+|||++++.|..||+.++|+|+.|++.||+..
T Consensus 44 ~~~~~~~~f~~~~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~ 85 (362)
T 4gew_A 44 SDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYGSE 85 (362)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHTTSSSSCHHHHHHHHHHCG
T ss_pred chHHHHHHHHHHhCCcHHHHHHHHhhcCchHHHHHHHHcCCc
Confidence 456789999999999999999999999999999999999543
No 13
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=97.87 E-value=1.9e-05 Score=45.65 Aligned_cols=39 Identities=31% Similarity=0.319 Sum_probs=34.6
Q ss_pred cchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969 6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45 (150)
Q Consensus 6 ~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~ 45 (150)
+...+.|++++++ |.++..|++.|+.++||++.|++-.|
T Consensus 2 ~~~~~~i~~L~~m-Gf~~~~a~~AL~~~~~n~e~A~~~L~ 40 (40)
T 1z96_A 2 PGLNSKIAQLVSM-GFDPLEAAQALDAANGDLDVAASFLL 40 (40)
T ss_dssp -CHHHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred chHHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence 4557789999998 99999999999999999999998654
No 14
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=97.65 E-value=4.9e-05 Score=53.46 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=38.9
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
.-.+.|+.++++||+++..|+..|..++|+++.||+..++..
T Consensus 38 d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~AI~~Lleg~ 79 (104)
T 1wj7_A 38 DFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN 79 (104)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred cHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 346789999999999999999999999999999999999875
No 15
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=97.14 E-value=6.5e-05 Score=60.00 Aligned_cols=45 Identities=20% Similarity=0.377 Sum_probs=0.0
Q ss_pred CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
.++..|+++|.+|+..||.+.+-+..||+.++||++.|+..|-+-
T Consensus 193 ~~~~~q~~~v~~~~~~T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l 237 (250)
T 1jkg_B 193 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHL 237 (250)
T ss_dssp ---------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 356677889999999999999999999999999999999999653
No 16
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=97.00 E-value=0.0013 Score=42.40 Aligned_cols=41 Identities=27% Similarity=0.400 Sum_probs=36.9
Q ss_pred CcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969 5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45 (150)
Q Consensus 5 ~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~ 45 (150)
+-+....+..|+.-||+.+-.|+.+|+--||+|.+|++.|=
T Consensus 14 t~dmdavls~fvrstgaepgLaRDlleGKnWDl~AAL~D~e 54 (73)
T 2l2d_A 14 TLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDYE 54 (73)
T ss_dssp SCCHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCCCcchhHHhhccCCccHhHHhhhHH
Confidence 34556788999999999999999999999999999999984
No 17
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.83 E-value=0.0019 Score=39.18 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=36.2
Q ss_pred cchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 6 ~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
+...+.|++.+++ |-++..|+..|++++||++.|++-.|+.
T Consensus 6 ~~~~~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~e~L~~g 46 (49)
T 1ify_A 6 SEYETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG 46 (49)
T ss_dssp HHHHHHHHHHHHT-TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred ccCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 3456789999987 8999999999999999999999988764
No 18
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=96.82 E-value=0.0027 Score=38.91 Aligned_cols=68 Identities=12% Similarity=0.048 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.....+.++|..|-......|+.+-+..++..+|..+.+-.+-.+...+....-|.|+.++|+..|..
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 35678999998884333369999999999999999887766666666677677799999999988754
No 19
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=96.66 E-value=0.002 Score=37.75 Aligned_cols=39 Identities=23% Similarity=0.467 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
..+.|++.+++ |-++..|++.|..++||++.|++-.|++
T Consensus 4 ~e~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 4 KSLAVEELSGM-GFTEEEAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHTT-TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCcCHHHHHHHHHcC
Confidence 45789999995 9999999999999999999999887654
No 20
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=96.64 E-value=0.0078 Score=36.18 Aligned_cols=64 Identities=6% Similarity=0.078 Sum_probs=51.8
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.+.++|..|-......|+.+-+.+.+..+|..+..-.+-.+-..+....-|.|+.+||+..|..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4678898885433469999999999999999887766666666777777899999999998865
No 21
>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A
Probab=96.64 E-value=0.00058 Score=41.21 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=37.2
Q ss_pred CcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 5 ~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
++..+++|.+.+++ |-++..|++.|.+++||.+.|++-.|++.
T Consensus 1 ~~~e~eaI~rL~~m-GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~ 43 (47)
T 1dv0_A 1 GSQEKEAIERLKAL-GFPESLVIQAYFACEKNENLAANFLLSQN 43 (47)
T ss_dssp --CCHHHHTTTTTT-TCCHHHHHHHHTTTTSCHHHHHHHTTSCC
T ss_pred CcchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence 35667889999887 99999999999999999999999998764
No 22
>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=96.61 E-value=0.0029 Score=41.62 Aligned_cols=44 Identities=25% Similarity=0.343 Sum_probs=38.5
Q ss_pred CCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 4 l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
..+...+.|++++++ |-++..|+..|++++||++.|++-.|++.
T Consensus 25 ~~~~~ee~I~~L~eM-GF~r~~a~~AL~~~~~nve~Ave~Ll~~~ 68 (73)
T 1vg5_A 25 RVAASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQS 68 (73)
T ss_dssp CSCCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred CCcccHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 345567889999995 89999999999999999999999998764
No 23
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=96.57 E-value=0.023 Score=38.85 Aligned_cols=65 Identities=12% Similarity=0.137 Sum_probs=43.0
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhh---cccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM---KAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l---~a~~~g~~tr~eF~~g~~~l 122 (150)
.++.++|..|-......|+.+-+..++..+|+.|....+-.+...+ .... |.|+.++|+..|...
T Consensus 8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~ 75 (149)
T 2mys_C 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAA 75 (149)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHH
Confidence 4566677766433335777777777777777777665555555555 5555 777777777777664
No 24
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=96.51 E-value=0.012 Score=37.28 Aligned_cols=67 Identities=7% Similarity=0.182 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|..|-......|+.+-+...+..+|+.+..-.+-.+...+....-|.|+.++|+..|...
T Consensus 13 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 79 (85)
T 2ktg_A 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEY 79 (85)
T ss_dssp HHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4678889998843334699999999999999999887776667777777778999999999988764
No 25
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=96.48 E-value=0.017 Score=37.19 Aligned_cols=66 Identities=8% Similarity=0.046 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+..+|..|-......|+.+-+...+..+|+.+..-.+-.+-..+....-|.|+.++|+..|..
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 467888999994333369999999999999999987766666666777777899999999998875
No 26
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=96.43 E-value=0.027 Score=36.21 Aligned_cols=71 Identities=10% Similarity=0.058 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID 125 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d 125 (150)
....+..+|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.++|+..|....-.
T Consensus 7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~ 77 (92)
T 2kn2_A 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGG 77 (92)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCC
Confidence 35678999999954334699999999999999998876666666666777777999999999999886543
No 27
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=96.41 E-value=0.01 Score=36.62 Aligned_cols=68 Identities=10% Similarity=0.081 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHhcCCC-C-CccchHHHHHHHhhcCCCC--CcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPY-L-DMILVDGITLLCNDLQVDP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~-~-d~I~~dG~~~~~edLgv~p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+..+|..|.|.+ . ..|+.+-+...+..+|..+ ..-.+-.+...+....-|.|+.++|+.-|..+
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 74 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 3578999999994433 3 5899999999999999776 54444445555666667999999999988764
No 28
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=96.36 E-value=0.015 Score=36.00 Aligned_cols=66 Identities=9% Similarity=0.112 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+..+|..|-......|+.+-+.+.+..+|+.+..-.+-.+-..+....-|.|+.++|+..|..
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467888999984333469999999999999999987766666666777777899999999988764
No 29
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=96.35 E-value=0.0048 Score=41.58 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
..+.|++++++ |-++..|+..|++++||++.|++-.|.++
T Consensus 29 ~ee~I~~Lv~M-GF~~~~A~~AL~~t~gdve~A~e~L~sh~ 68 (83)
T 1veg_A 29 SQESINQLVYM-GFDTVVAEAALRVFGGNVQLAAQTLAHHG 68 (83)
T ss_dssp CHHHHHHHHHH-SCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 46789999997 99999999999999999999999999753
No 30
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=96.33 E-value=0.0046 Score=37.86 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
.+.|.+.+++ |- ++..++..|++++||++.|++-.|.++
T Consensus 13 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~~ 52 (52)
T 2jy5_A 13 QQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGSS 52 (52)
T ss_dssp HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTCC
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhCc
Confidence 4788999987 77 899999999999999999999887653
No 31
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=96.22 E-value=0.039 Score=38.37 Aligned_cols=67 Identities=7% Similarity=-0.004 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhcCCC-CCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|..|-... ...|+.+-+..++..+|+.+....+--+-..+....-|.|+.+||+..+...
T Consensus 17 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~ 84 (161)
T 1dtl_A 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 84 (161)
T ss_dssp HHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 456777777775434 4578888888888888887776666556666666667888888888877764
No 32
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=96.20 E-value=0.061 Score=34.03 Aligned_cols=74 Identities=9% Similarity=-0.029 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk 131 (150)
..++..+|..|-......|+.+-+.+.+..+| .+..-.+-.+-..+....-|.|+.++|+..+.... .-++.++
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~-~~~~~~~ 83 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANR-GLVKDVS 83 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCT-TTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCc-cHHHHHH
Confidence 57788899999543346999999999999999 77666666666667777789999999999998753 2344443
No 33
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=96.11 E-value=0.043 Score=36.07 Aligned_cols=67 Identities=9% Similarity=0.035 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
.....+.++|..|-......|+.+-+.+.+..+|..+.+-.+--+...+....-|.|+.+||+..|.
T Consensus 26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 3568899999999543346999999999999999988766665666666667779999999998775
No 34
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=96.07 E-value=0.019 Score=36.11 Aligned_cols=69 Identities=9% Similarity=0.028 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcC-CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg-v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 124 (150)
....+. +|..|-......|+.+-+...+..+| ..+..-.+-.+...+....-|.|+.++|+..|....+
T Consensus 7 ~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 76 (81)
T 1c7v_A 7 EEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN 76 (81)
T ss_dssp CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred HHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence 467888 99999543336999999999999999 8877666666666777777899999999999887544
No 35
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.05 E-value=0.07 Score=36.32 Aligned_cols=65 Identities=11% Similarity=0.160 Sum_probs=35.6
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
..+.++|..|-......|+.+-+..++..+|+.|....+-.+...+....-|.|+.++|+..+..
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~ 70 (142)
T 2bl0_C 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGR 70 (142)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHH
Confidence 44555666653222246666666666666666665544444444444445566666666665554
No 36
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=96.04 E-value=0.065 Score=37.13 Aligned_cols=66 Identities=6% Similarity=0.019 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+.++|..|-......|+.+-+..++..+|+.+....+-.+...+....-|.|+.++|+..+..
T Consensus 22 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~ 87 (161)
T 3fwb_A 22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGE 87 (161)
T ss_dssp HHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHH
Confidence 456777777774333468999999999988998887777666667777777788888888888765
No 37
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=96.03 E-value=0.0066 Score=37.26 Aligned_cols=39 Identities=28% Similarity=0.410 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
.+.|.+.+++ |- ++..|+..|++++||++.|++-.|+.+
T Consensus 12 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~ 51 (53)
T 2knz_A 12 QQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ 51 (53)
T ss_dssp HHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence 4568888887 66 899999999999999999999988764
No 38
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=96.00 E-value=0.1 Score=36.44 Aligned_cols=120 Identities=8% Similarity=0.095 Sum_probs=79.1
Q ss_pred CCCCCcchHHHHH-HHHHH-hCC----CHHHHHHHHHhCCCCchh-hhhhhhc----cCCC---------------CCcC
Q 031969 1 MHKLSRSNRDKLQ-QFVSI-TGA----SEKAALQALKASDWHLEG-AFDVFYS----QPQS---------------KSLT 54 (150)
Q Consensus 1 m~~l~~~~~~~i~-~F~~i-T~~----~~~~A~~~L~~~~w~le~-Ai~~f~~----~~~~---------------~~~~ 54 (150)
|..||..|.+.++ -|..+ ++- +...-..+|+..++++.. -+...+. +..+ ....
T Consensus 1 Ms~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 80 (148)
T 2lmt_A 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETD 80 (148)
T ss_dssp CCSCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccC
Confidence 7788887766654 45554 211 334455677777776532 2333321 1111 1233
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
....|...|..|=......|+.+-+.+.+..+|..+.+..+-.+...+-...=|.|+-+||++-|.
T Consensus 81 ~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp THHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 457788999998543446999999999999999988776666666666666779999999998664
No 39
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=96.00 E-value=0.031 Score=38.12 Aligned_cols=66 Identities=9% Similarity=0.153 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+.++|..|-......|+.+-+.+++..+|+.+....+-.+...+....-|.|+.++|+..+..
T Consensus 10 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~ 75 (147)
T 4ds7_A 10 IAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSR 75 (147)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 355666677664333357777777777777777776666555556666666677777777776654
No 40
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.95 E-value=0.011 Score=39.85 Aligned_cols=39 Identities=21% Similarity=0.383 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
.+.|++++++ |.++..|++.|..++||++.|++-.|+..
T Consensus 22 ~~~I~qL~~M-GF~~~~a~~AL~~~n~n~e~A~ewL~~h~ 60 (85)
T 2dkl_A 22 SRLIKQLTDM-GFPREPAEEALKSNNMNLDQAMSALLEKK 60 (85)
T ss_dssp HHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHTTS
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHHCc
Confidence 6779999995 99999999999999999999999988764
No 41
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.91 E-value=0.01 Score=37.59 Aligned_cols=40 Identities=38% Similarity=0.500 Sum_probs=35.5
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
...+.|++++++ |-++..|++.|+.++||++.|++-.|++
T Consensus 8 ~~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~A~e~L~~~ 47 (63)
T 2dak_A 8 PPEDCVTTIVSM-GFSRDQALKALRATNNSLERAVDWIFSH 47 (63)
T ss_dssp CCHHHHHHHHHH-TCCHHHHHHHHHHTTSCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 346789999995 9999999999999999999999988865
No 42
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.86 E-value=0.0078 Score=37.21 Aligned_cols=40 Identities=28% Similarity=0.331 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCCH-HHHHHHHHhCCCCchhhhhhhhccCC
Q 031969 9 RDKLQQFVSITGASE-KAALQALKASDWHLEGAFDVFYSQPQ 49 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~-~~A~~~L~~~~w~le~Ai~~f~~~~~ 49 (150)
.+.|.+++++ |-++ ..+++.|++++||++.||+-.|..+.
T Consensus 10 ~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~ 50 (54)
T 2dah_A 10 QVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSG 50 (54)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 5678999887 8865 55799999999999999999997654
No 43
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=95.80 E-value=0.0091 Score=38.33 Aligned_cols=37 Identities=22% Similarity=0.088 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~ 45 (150)
.+.|+++++.||++-..|+..|+.++||++.|+.-.-
T Consensus 10 ~~~Vk~LRe~TGag~~dcKkAL~e~~GDi~~Ai~~Lr 46 (64)
T 2cp9_A 10 KELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLH 46 (64)
T ss_dssp CHHHHHHHHHHCCCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 3679999999999999999999999999999998664
No 44
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=95.78 E-value=0.014 Score=38.25 Aligned_cols=41 Identities=29% Similarity=0.400 Sum_probs=36.2
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
...+.|++.+++ |-++..|++.|+.++||++.|++-.|+++
T Consensus 28 ~~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~Ave~L~~~~ 68 (73)
T 1wiv_A 28 IDQSSVDTLLSF-GFAEDVARKALKASGGDIEKATDWVFNNS 68 (73)
T ss_dssp SCHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence 346789999986 99999999999999999999999988765
No 45
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=95.76 E-value=0.046 Score=34.67 Aligned_cols=65 Identities=6% Similarity=-0.013 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHH---HHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV---MLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~---~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+..+|..|-......|+.+-+...+..+|+.+.... +-.+...+....-|.|+. +|+..+..
T Consensus 13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 567889999995433469999999999999999987766 555555555556799999 99998865
No 46
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.75 E-value=0.013 Score=37.37 Aligned_cols=40 Identities=28% Similarity=0.419 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
..+.|++.+++ |-++..|+..|..++||++.|++-.|++.
T Consensus 9 ~~~~I~~L~~M-GF~~~~a~~AL~~~~~nve~A~e~L~~~~ 48 (63)
T 1wji_A 9 DEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN 48 (63)
T ss_dssp CHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 46788999884 99999999999999999999999988664
No 47
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=95.73 E-value=0.036 Score=34.46 Aligned_cols=65 Identities=12% Similarity=0.054 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
.++..+|..|-......|+.+-+..++..+| .+.+-.+-.+-..+....-|.|+.++|+..+...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 5688899999543346999999999999999 6665555555556666777999999999988774
No 48
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=95.71 E-value=0.055 Score=36.99 Aligned_cols=67 Identities=9% Similarity=0.131 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|..|-......|+.+-+.+++..+|+.+....+-.+...+....-|.|+.++|+..+...
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~ 76 (153)
T 3ox6_A 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPK 76 (153)
T ss_dssp HHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHH
Confidence 4667788888743334699999999999999999988887777777777778999999999998653
No 49
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=95.69 E-value=0.044 Score=38.07 Aligned_cols=67 Identities=9% Similarity=0.046 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhc-CCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYK-DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~-d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|..|- ......|+.+-+.+++..+|+.|....+-.+...+....-|.|+.++|+..+...
T Consensus 12 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 79 (158)
T 2jnf_A 12 VKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARF 79 (158)
T ss_dssp HHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 467888898886 4444699999999999999999987777777777777778999999999999764
No 50
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=95.69 E-value=0.067 Score=35.12 Aligned_cols=66 Identities=17% Similarity=0.131 Sum_probs=53.3
Q ss_pred HHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..|.++|.+|-+.++ ..|+.+-+.+++.. ||..+.+..+--+-..+-...=|.|+-+||+..|..+
T Consensus 9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 567889999985433 49999999999999 9988776666666666667777999999999988774
No 51
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=95.66 E-value=0.036 Score=34.82 Aligned_cols=67 Identities=10% Similarity=0.059 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcC--CCC--CcHHHHH--HHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ--VDP--QDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg--v~p--ed~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...++..+|..|-......|+.+-+..++..+| ..+ +.+..++ +-..+....-|.|+.+||+..+..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~ 77 (83)
T 1yx7_A 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAE 77 (83)
T ss_dssp SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence 346789999999543346999999999999999 544 4443321 223334455699999999976654
No 52
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=95.61 E-value=0.066 Score=37.11 Aligned_cols=68 Identities=6% Similarity=0.034 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.++|+.-+..++
T Consensus 95 ~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 162 (162)
T 1top_A 95 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGVQ 162 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhcC
Confidence 45577788888543346899999999999999776655555555556666678999999998887653
No 53
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.59 E-value=0.014 Score=37.22 Aligned_cols=47 Identities=26% Similarity=0.376 Sum_probs=41.7
Q ss_pred CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCCC
Q 031969 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS 50 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~ 50 (150)
.|++.+.+.|...++ .|-++.+|++.|++.+-|+|.|++=-|.++.+
T Consensus 14 ~ls~se~e~V~~Lvs-MGFs~~qA~kALKat~~NvErAaDWLFSH~D~ 60 (63)
T 1wgn_A 14 MLSPSERQCVETVVN-MGYSYECVLRAMKKKGENIEQILDYLFAHSGP 60 (63)
T ss_dssp TCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHCSCHHHHHHHHHHHSCC
T ss_pred hhCcchHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 478889999999986 57999999999999999999999999987643
No 54
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=95.58 E-value=0.061 Score=38.73 Aligned_cols=67 Identities=10% Similarity=0.061 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhcCCCC-CccchHHHHHHHhhc----CCCCCcHHHHHHH-----------HhhcccccccccHHHHHHHh
Q 031969 56 TRHLEELYNRYKDPYL-DMILVDGITLLCNDL----QVDPQDIVMLVVS-----------WHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edL----gv~ped~~~LvLa-----------~~l~a~~~g~~tr~eF~~g~ 119 (150)
..++.++|+.|.|.++ ..|+.+-+...+..+ |..+.+..+-.+. ..+....-|.|+.+||+..|
T Consensus 11 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 90 (191)
T 2ccm_A 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMW 90 (191)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHH
Confidence 5779999999944444 599999999999999 9988766554444 55666677999999999998
Q ss_pred HHc
Q 031969 120 QSL 122 (150)
Q Consensus 120 ~~l 122 (150)
..+
T Consensus 91 ~~~ 93 (191)
T 2ccm_A 91 AEC 93 (191)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 55
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=95.55 E-value=0.0066 Score=36.59 Aligned_cols=63 Identities=11% Similarity=0.114 Sum_probs=48.6
Q ss_pred HHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 60 ~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
.++|..|-......|+.+-+..++..+|..+....+-.+-..+....-|.|+.+||+..|..+
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~ 65 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 467888754344699999999999999977665555555566667778999999999988764
No 56
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=95.53 E-value=0.065 Score=37.62 Aligned_cols=66 Identities=9% Similarity=0.154 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+.++|..|-......|+.+-+..++..+|+.+....+-.+-..+....-|.|+.+||+..+..
T Consensus 27 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 92 (169)
T 3qrx_A 27 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTA 92 (169)
T ss_dssp HHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 456777777774433458888888888888888887776666666666667788888888887765
No 57
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=95.47 E-value=0.061 Score=36.28 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~ 119 (150)
...|.+.|+.|=......|+.+-+...+..||+.+.+-.+-.+-..+....-|.|+-+||+.-|
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 4678889999844334699999999999999999877766667777777788999999999754
No 58
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=95.45 E-value=0.057 Score=39.60 Aligned_cols=67 Identities=9% Similarity=0.018 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+.++|..|-......|+.+-+...+..+|+.+. ..+-.+...+....-|.|+.+||+..+...
T Consensus 50 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~ 116 (191)
T 3k21_A 50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDR 116 (191)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCG
T ss_pred HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhh
Confidence 3467888888884433468999999999999998876 444445555666667888888888887443
No 59
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=95.40 E-value=0.068 Score=35.18 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL 127 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi 127 (150)
...|..+|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.++|+..+......+.
T Consensus 23 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 94 (105)
T 1wlz_A 23 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSETAATP 94 (105)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-------
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhccCCCCc
Confidence 567888999984333469999999999999999887666555555555556799999999998887554443
No 60
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=95.39 E-value=0.14 Score=33.54 Aligned_cols=66 Identities=9% Similarity=0.034 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
....+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 46789999999943334699999999999999 7777666555555566666779999999998765
No 61
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=95.36 E-value=0.083 Score=36.54 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-|..
T Consensus 95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 466778888884333368999999999999988877666666666666667788999999887754
No 62
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=95.36 E-value=0.077 Score=37.11 Aligned_cols=65 Identities=12% Similarity=0.122 Sum_probs=42.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
..+.++|..|-......|+.+-+..++..+|..+....+-.+...+....-|.|+.++|+..+..
T Consensus 27 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 91 (166)
T 2aao_A 27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLH 91 (166)
T ss_dssp HHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 45666777764333357777777777777777776655555555566666677777777776643
No 63
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=95.32 E-value=0.09 Score=37.31 Aligned_cols=66 Identities=11% Similarity=0.124 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+.++|..|-......|+.+-+..++..+|+.|....+-.+...+....-|.|+.+||+..+..
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~ 75 (179)
T 2f2o_A 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHH
Confidence 456667777664333357777777777777777776655555555555555677777777766544
No 64
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=95.29 E-value=0.079 Score=37.24 Aligned_cols=69 Identities=9% Similarity=0.106 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHH----HHhhcCCCCCcHHHH-----------HHHHhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITL----LCNDLQVDPQDIVML-----------VVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~----~~edLgv~ped~~~L-----------vLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
..++.++|+.|-......|+.+-+.. ++..+|+.|....+- .+...+....-|.|+.+||+..+.
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~ 85 (176)
T 1nya_A 6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE 85 (176)
T ss_dssp HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 46788999998433346999999998 789999999776654 344555666679999999999998
Q ss_pred HcCC
Q 031969 121 SLGI 124 (150)
Q Consensus 121 ~l~~ 124 (150)
....
T Consensus 86 ~~~~ 89 (176)
T 1nya_A 86 NLIF 89 (176)
T ss_dssp HHHS
T ss_pred HHhc
Confidence 8644
No 65
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=95.29 E-value=0.038 Score=36.32 Aligned_cols=40 Identities=25% Similarity=0.441 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQPQ 49 (150)
Q Consensus 9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~~~~ 49 (150)
.+.|++++++ |- ++..+++.|+.++||++.||+-.|..+.
T Consensus 30 e~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~ 70 (74)
T 1vej_A 30 QQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGASG 70 (74)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCCC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 5678999987 76 5788899999999999999999998753
No 66
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=95.28 E-value=0.3 Score=32.02 Aligned_cols=68 Identities=9% Similarity=0.058 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.....+..+|..|-......|+.+-+.+.+..+ |..+.+..+--+-..+....-|.|+.+||+.-|++
T Consensus 38 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 357889999999954334699999999999999 88876665555555666667799999999988765
No 67
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=95.22 E-value=0.083 Score=34.26 Aligned_cols=65 Identities=20% Similarity=0.272 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+..+|..|-......|+.+-+..++..+|++.+.+.. +-..+....-|.|+.+||+..|..+
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~--~~~~~D~d~dg~I~~~EF~~~~~~~ 90 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDGAITFQEFARGFLGS 90 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHH--HHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHH--HHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 4678889999865444699999999999999976554433 3334555667999999999988763
No 68
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=95.22 E-value=0.095 Score=36.24 Aligned_cols=64 Identities=11% Similarity=0.129 Sum_probs=36.9
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
..+.++|..|-......|+.+-+...+..+|..|....+-.+...+....-|.|+.++|+..|.
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~ 73 (148)
T 1exr_A 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA 73 (148)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 4455566655332234677777777777777766555544444445455556666666665554
No 69
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=95.19 E-value=0.16 Score=34.46 Aligned_cols=100 Identities=10% Similarity=0.061 Sum_probs=69.1
Q ss_pred CHHHHHHHHHhCCCCc-hhhhhhhhccCCC---------------CCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhh
Q 031969 22 SEKAALQALKASDWHL-EGAFDVFYSQPQS---------------KSLTDTRHLEELYNRYKDPYLDMILVDGITLLCND 85 (150)
Q Consensus 22 ~~~~A~~~L~~~~w~l-e~Ai~~f~~~~~~---------------~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed 85 (150)
+...-..+|...+.++ +..+...+....+ ........+..+|..|-......|+.+-+.+++..
T Consensus 25 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 104 (143)
T 3j04_B 25 DKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTT 104 (143)
T ss_dssp CHHHHHHHHHHTSCCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH
Confidence 5566667777776665 2334444433211 11234677888888884333468999999999999
Q ss_pred cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 86 LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 86 Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
+|..+.+-.+-.+...+....-|.|+.+||+..|+.
T Consensus 105 ~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 105 MGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp SSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred cCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 998887766666666666677799999999998865
No 70
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=95.18 E-value=0.25 Score=32.43 Aligned_cols=67 Identities=6% Similarity=0.033 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
.....+..+|..|-......|+.+-+.+.+..+ |..+.+-.+-.+-..+....-|.|+.+||+.-|+
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 39 KTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 357889999999954334699999999999999 7777655555555555666679999999998765
No 71
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=95.17 E-value=0.26 Score=32.32 Aligned_cols=68 Identities=7% Similarity=0.056 Sum_probs=53.0
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.....+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+...+....-|.|+.++|+..|+.
T Consensus 39 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 39 MSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred chHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 356889999999854344699999999999999 77776665555556666677799999999987764
No 72
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=95.16 E-value=0.058 Score=34.28 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=51.9
Q ss_pred HHHHHHHHHhcC-CCCC-ccchHHHHHHHhh---cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKD-PYLD-MILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~ed---Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-. .... .|+.+-+...+.. +|..+....+-.+...+....-|.|+.+||+..|..+
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 578889999963 3445 9999999999997 9987766555555556666677999999999988764
No 73
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=95.16 E-value=0.065 Score=35.71 Aligned_cols=68 Identities=12% Similarity=0.083 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
...+..+|..|-......|+.+-+...+..+|..+..-.+-.+...+....-|.|+.++|+.-|....
T Consensus 31 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~ 98 (107)
T 2d58_A 31 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 98 (107)
T ss_dssp HHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence 45678888888433336999999999999999998776666666667777779999999999887654
No 74
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=95.15 E-value=0.058 Score=37.44 Aligned_cols=65 Identities=12% Similarity=0.189 Sum_probs=33.8
Q ss_pred HHHHHHHHHhcC--CCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKD--PYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d--~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+.++|..|-. .....|+.+-+...+..+|+.|....+-.| ..+....-|.|+.++|+..+...
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~ 75 (156)
T 1wdc_C 9 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGL 75 (156)
T ss_dssp HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHH
Confidence 345555555532 233456666666666666666554443333 33333444556666666555543
No 75
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=95.15 E-value=0.07 Score=34.23 Aligned_cols=67 Identities=13% Similarity=0.063 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhc-CCCCC-ccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYK-DPYLD-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~-d~~~d-~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+..+|..|- ..... .|+.+-+..++.. +|..+.+-.+--+...+....-|.|+.+||+..|..+
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 81 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 467888999995 23345 9999999999998 9988766665555556666677999999999988764
No 76
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=95.14 E-value=0.074 Score=36.84 Aligned_cols=64 Identities=9% Similarity=0.172 Sum_probs=36.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
..|.++|+.|-......|+.+-+...+..+|+.|....+--+...+....-|.|+.++|+..|.
T Consensus 6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (143)
T 2obh_A 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMT 69 (143)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHH
Confidence 4455666666332234666666666666677666555444444444444556666666665554
No 77
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=95.02 E-value=0.22 Score=35.17 Aligned_cols=66 Identities=12% Similarity=0.157 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-......|+.+-+.+++..+|..+....+-.+-..+....-|.|+.+||+..+..+
T Consensus 74 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 139 (172)
T 2znd_A 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL 139 (172)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 567788888854334699999999999999988776666666666777778999999999998874
No 78
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=95.02 E-value=0.087 Score=35.77 Aligned_cols=63 Identities=10% Similarity=0.168 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
+..+.++|..|-......|+.+-+.+++..+|+.|....+-.+... ..-|.|+.++|+..+..
T Consensus 4 ~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~ 66 (145)
T 2bl0_B 4 ADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRK 66 (145)
T ss_dssp HHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHH
Confidence 3346666666633223466777777777667666654333222222 33456666666665544
No 79
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=95.01 E-value=0.092 Score=36.07 Aligned_cols=72 Identities=13% Similarity=0.051 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhh-cCCCCCcHHHHHHHHh----hcccccccccHHHHHHHhHHcCCC
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQDIVMLVVSWH----MKAATMCEFSKQEFIGGLQSLGID 125 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-Lgv~ped~~~LvLa~~----l~a~~~g~~tr~eF~~g~~~l~~d 125 (150)
.....+..+|..|-......|+.+-+.+++.. +|..+.+-.+-.+... +....-|.|+.+||+..+..+++.
T Consensus 72 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~ 148 (155)
T 3ll8_B 72 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIH 148 (155)
T ss_dssp CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCGG
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCch
Confidence 34578888998884433468999999999988 6877665555444444 666677999999999999888764
No 80
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=94.99 E-value=0.067 Score=37.33 Aligned_cols=63 Identities=11% Similarity=0.121 Sum_probs=38.5
Q ss_pred HHHHHHHHHhc--CCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 57 RHLEELYNRYK--DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 57 ~~l~~lFd~Y~--d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
+.+.++|..|- ......|+.+-+..++..||+.|....+--+...+.... |.|+.++|+..+.
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~d~~~-g~i~~~eF~~~~~ 73 (159)
T 2ovk_C 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGE-KAYKLEEILPIYE 73 (159)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTTS-CEEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCC-CeEcHHHHHHHHH
Confidence 56666777763 223347777777777777777776555444444443322 6777777776664
No 81
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=94.98 E-value=0.55 Score=32.37 Aligned_cols=100 Identities=6% Similarity=0.044 Sum_probs=66.1
Q ss_pred CHHHHHHHHHhCCCCc-hhhhhhhhccCCC---------------CCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhh
Q 031969 22 SEKAALQALKASDWHL-EGAFDVFYSQPQS---------------KSLTDTRHLEELYNRYKDPYLDMILVDGITLLCND 85 (150)
Q Consensus 22 ~~~~A~~~L~~~~w~l-e~Ai~~f~~~~~~---------------~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed 85 (150)
+...-..+|...+.++ +..+...+.+..+ ........+..+|..|-......|+.+-+.+++..
T Consensus 36 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~ 115 (156)
T 1wdc_B 36 SKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLEN 115 (156)
T ss_dssp CHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHhCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCcCCCCccCHHHHHHHHHH
Confidence 4555566666655554 2334444443222 11234577888888884333468999999999999
Q ss_pred cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 86 LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 86 Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
+|..+.+-.+-.+...+... -|.|+.++|+..+..-
T Consensus 116 ~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 116 MGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp SSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred hCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence 99876655555555566666 8999999999988763
No 82
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=94.98 E-value=0.083 Score=36.60 Aligned_cols=47 Identities=11% Similarity=0.053 Sum_probs=20.4
Q ss_pred ccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969 73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~ 119 (150)
.|+.+-+..++..+|+.|....+-.+...+....-|.|+.++|+..+
T Consensus 36 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 82 (162)
T 1top_A 36 DISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82 (162)
T ss_dssp EEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHH
Confidence 44444444444444444443333333333333333444444444444
No 83
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=94.91 E-value=0.13 Score=33.79 Aligned_cols=67 Identities=7% Similarity=0.018 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
....+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+-..+....-|.|+.+||+..|..
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 56889999999954334699999999999999 77776655555555666667799999999988764
No 84
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=94.90 E-value=0.1 Score=35.52 Aligned_cols=118 Identities=8% Similarity=0.083 Sum_probs=78.6
Q ss_pred CCCcchHHHHH-HHHHH----hC-CCHHHHHHHHHhCCCCchh-hhhhhhc----cCCCC---------------C----
Q 031969 3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLEG-AFDVFYS----QPQSK---------------S---- 52 (150)
Q Consensus 3 ~l~~~~~~~i~-~F~~i----T~-~~~~~A~~~L~~~~w~le~-Ai~~f~~----~~~~~---------------~---- 52 (150)
.|++.+.+.++ -|..+ .| .+...-..+|...++.+.. .+...|. +..+. .
T Consensus 4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 83 (153)
T 3ox6_A 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETAD 83 (153)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccc
Confidence 46666655553 45554 23 3566677778877776632 2333332 11110 0
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhh-cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
......+..+|..|-......|+.+-+.+++.. +|..+.+..+-.+...+....-|.|+.+||+.-|+
T Consensus 84 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 84 MIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 012467888999985434469999999999999 89888777777777777777789999999998764
No 85
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=94.86 E-value=0.28 Score=32.08 Aligned_cols=66 Identities=5% Similarity=0.041 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
....+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 56789999999954334689999999999999 5666655555555556666779999999998764
No 86
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=94.76 E-value=0.036 Score=34.68 Aligned_cols=39 Identities=23% Similarity=0.355 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
.+.|++.+++ |- ++..+++.|++++||++.||+-.|+.+
T Consensus 18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~~ 57 (58)
T 1wr1_B 18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNGD 57 (58)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence 4578888887 75 577889999999999999999988754
No 87
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=94.75 E-value=0.12 Score=35.05 Aligned_cols=64 Identities=11% Similarity=0.089 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.++|+.-++
T Consensus 83 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 356777787773323357888888888888887766555555555555 5668888888887654
No 88
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=94.74 E-value=0.21 Score=36.39 Aligned_cols=69 Identities=9% Similarity=0.127 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
..+.+.++|+.|-.. ....|+.+-+..++..+|..+....+-.+-..+....-|.|+.+||+..+..++
T Consensus 20 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~ 89 (204)
T 1jba_A 20 DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVL 89 (204)
T ss_dssp HHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHc
Confidence 456777888887653 245788888888888888855544444455556666668888888888877654
No 89
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=94.70 E-value=0.33 Score=33.76 Aligned_cols=66 Identities=11% Similarity=0.154 Sum_probs=48.9
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
+.|.++|+.|=......|+.+-+..++..+|.+|.+..+-.+...+....-|.++..+|+..+...
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 75 (148)
T 2lmt_A 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQ 75 (148)
T ss_dssp HHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHH
Confidence 556777888743334588888888899999999887776666666666777888888888776653
No 90
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=94.68 E-value=0.35 Score=33.28 Aligned_cols=65 Identities=15% Similarity=0.146 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+.
T Consensus 90 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 154 (158)
T 2jnf_A 90 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154 (158)
T ss_dssp SSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTS
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 34455556555322224566666666666666555444444444444445556666666665543
No 91
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=94.68 E-value=0.081 Score=35.15 Aligned_cols=69 Identities=12% Similarity=0.102 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHh---hcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCN---DLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e---dLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
....+..+|..|-......|+.+-...++. ..+..+....+-.+-..+....-|.|++++|...+..++
T Consensus 34 ~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~ 105 (134)
T 1jfj_A 34 NEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG 105 (134)
T ss_dssp HHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhC
Confidence 345566666666432334666666666664 222222211222222233344456677777776666655
No 92
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=94.67 E-value=0.32 Score=31.86 Aligned_cols=66 Identities=8% Similarity=0.000 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
....+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 46789999999843334689999999999999 7776655555555566666679999999998764
No 93
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=94.67 E-value=0.16 Score=35.55 Aligned_cols=118 Identities=13% Similarity=0.200 Sum_probs=72.6
Q ss_pred CCcchHHHHH-HHHHH-h---C-CCHHHHHHHHHhCCCCc-hhhhhhhhcc----CCCC---------------CcCCHH
Q 031969 4 LSRSNRDKLQ-QFVSI-T---G-ASEKAALQALKASDWHL-EGAFDVFYSQ----PQSK---------------SLTDTR 57 (150)
Q Consensus 4 l~~~~~~~i~-~F~~i-T---~-~~~~~A~~~L~~~~w~l-e~Ai~~f~~~----~~~~---------------~~~~~~ 57 (150)
++..+.+.++ -|..+ + | .+...-..+|...+..+ +..+...|.. ..+. ......
T Consensus 22 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 101 (169)
T 3qrx_A 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSRE 101 (169)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHH
Confidence 4444444443 34443 1 2 25666677777777665 2333333321 1110 001245
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+.-|+.
T Consensus 102 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 102 EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 6777888884333468999999999999998776666666666666777799999999987765
No 94
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=94.65 E-value=0.043 Score=32.64 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCC-CHHHHHHHHHhCCCCchhhhhhhhc
Q 031969 9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYS 46 (150)
Q Consensus 9 ~~~i~~F~~iT~~-~~~~A~~~L~~~~w~le~Ai~~f~~ 46 (150)
.+.|.+.+++ |- ++..+++.|++++||++.|++-.|+
T Consensus 8 ~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~ 45 (46)
T 2bwb_A 8 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN 45 (46)
T ss_dssp HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 4678888886 76 5677899999999999999998775
No 95
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=94.61 E-value=0.17 Score=35.86 Aligned_cols=65 Identities=9% Similarity=0.059 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcC-CCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg-v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
.+++.++|..|-......|+.+-+...+..+| ..+....+-.+...+....-|.++.+||+..|.
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~ 71 (172)
T 2znd_A 6 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 71 (172)
T ss_dssp CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHH
T ss_pred hhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 45566666665322234566666666666555 333333333333333444445555555555443
No 96
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.60 E-value=0.054 Score=32.05 Aligned_cols=39 Identities=28% Similarity=0.508 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
..+.|.++++ .|-++..|++.|..++ |++.|++-.++++
T Consensus 9 ~~~~v~~L~~-MGF~~~~a~~AL~~~~-n~e~A~~~L~~h~ 47 (47)
T 2ekk_A 9 NQQQLQQLMD-MGFTREHAMEALLNTS-TMEQATEYLLTHP 47 (47)
T ss_dssp CHHHHHHHHH-HHCCHHHHHHHHHHSC-SHHHHHHHHHTCC
T ss_pred CHHHHHHHHH-cCCCHHHHHHHHHHcC-CHHHHHHHHHcCC
Confidence 4678999999 5999999999999998 9999999887653
No 97
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.48 E-value=0.05 Score=36.43 Aligned_cols=40 Identities=20% Similarity=0.310 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
..+.|.+.++ .|-++..|++.|..++||++.|++-.|+..
T Consensus 29 ~e~~i~~L~~-MGF~~~~a~~AL~~t~~nve~A~ewL~~~~ 68 (83)
T 2dai_A 29 DEAALRQLTE-MGFPENRATKALQLNHMSVPQAMEWLIEHA 68 (83)
T ss_dssp CHHHHHHHHH-HTCCHHHHHHHHHHTTSCHHHHHHHHHHGG
T ss_pred CHHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 4678999999 499999999999999999999999888653
No 98
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=94.45 E-value=0.093 Score=32.23 Aligned_cols=66 Identities=12% Similarity=0.139 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHhcC-CCCC-ccchHHHHHHHhh-cCCC---CCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKD-PYLD-MILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~ed-Lgv~---ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+..+|..|-. .... .|+.+-+..++.. +|.. ++.+.. +...+....-|.|+.++|+..|..+
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~--~~~~~D~~~dg~i~~~eF~~~~~~~ 76 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDD--LFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSH--HHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHH--HHHHhcCCCCCCCcHHHHHHHHHHh
Confidence 35789999999964 4445 9999999999985 8853 333333 3334555667999999999988764
No 99
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=94.39 E-value=0.041 Score=37.97 Aligned_cols=68 Identities=16% Similarity=0.147 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhccc--ccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA--TMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~--~~g~~tr~eF~~g~~~l~ 123 (150)
...+.++|..|-......|+.+-+...+..+|+.|....+-.+...+... .-|.|+.+||+..+....
T Consensus 9 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~ 78 (151)
T 1w7j_B 9 LEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVA 78 (151)
T ss_dssp --CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHh
Confidence 35678888888543446899999999999999998766655555555545 568899999998887753
No 100
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=94.34 E-value=0.85 Score=31.70 Aligned_cols=68 Identities=3% Similarity=-0.219 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+..+|..|-......|+.+-+.+++..+|....+-.+-.+...+....=|.|+.+||+..|...
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 45778889998854334689999999999999977655544444455555667999999999988763
No 101
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=94.31 E-value=0.068 Score=36.38 Aligned_cols=62 Identities=11% Similarity=0.090 Sum_probs=35.8
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+.++|..|-......|+.+-+...+..+|+.|....+-.+. . ..-|.|+.+||+..+...
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~~~ 66 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIE---S-TLPAEVDMEQFLQVLNRP 66 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHH---T-TSCSSEEHHHHHHHHCTT
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH---h-CCCCcCcHHHHHHHHHHH
Confidence 4566677666432335677777777777777766544332222 2 444666666666665554
No 102
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=94.28 E-value=0.17 Score=34.20 Aligned_cols=68 Identities=7% Similarity=0.025 Sum_probs=51.8
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus 73 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp GGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 34678899999884333468999999999999998776555555555555566799999999998875
No 103
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=94.23 E-value=0.21 Score=34.43 Aligned_cols=68 Identities=7% Similarity=0.004 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHh--hcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH--MKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~--l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+... +....-|.|+.++|+..+...
T Consensus 82 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 45778888988843334689999999999999987665554444444 556667999999999988763
No 104
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=94.22 E-value=0.12 Score=36.94 Aligned_cols=67 Identities=15% Similarity=0.152 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHH-----HHHhhcCCCCCcH-----HHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~-----~~~edLgv~ped~-----~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..++.++|..|-......|+.+-+. ..+..+|+.|.+. .+-.+...+....-|.|+.+||+..|..+
T Consensus 15 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~ 91 (191)
T 1uhk_A 15 IGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKL 91 (191)
T ss_dssp HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHH
Confidence 4678899999843334699999998 7899999998765 33334445555667999999999988764
No 105
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=94.17 E-value=0.29 Score=35.59 Aligned_cols=67 Identities=13% Similarity=-0.006 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
..+++.++|+.|-......|+.+-+...+..+|..+..-.+-.+...+....-|.|+.+||+..+..
T Consensus 25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~ 91 (191)
T 1y1x_A 25 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF 91 (191)
T ss_dssp TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 4678888999884333458999999988887777776655555556666666788888888877754
No 106
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=94.16 E-value=0.23 Score=35.72 Aligned_cols=65 Identities=12% Similarity=0.149 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|..|-......|+.+-+..++..+|++++.+. .+-..+....-|.|+.+||+..|..+
T Consensus 38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~--~~~~~~D~d~~g~i~~~Ef~~~~~~~ 102 (180)
T 3mse_B 38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDIN--RILQALDINDRGNITYTEFMAGCYRW 102 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCCSEECHHHHHHHHSCC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHhc
Confidence 356667777764323357777777777777777653322 22233444455777777777766654
No 107
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.13 E-value=0.077 Score=33.67 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=34.4
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhCCC-CchhhhhhhhccC
Q 031969 10 DKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFYSQP 48 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~~~w-~le~Ai~~f~~~~ 48 (150)
+.|.+.++ .|-++..|++.|..++| |++.|++-.|+.+
T Consensus 21 ~~i~~L~~-MGF~~~~a~~AL~~t~~~nve~A~ewL~~~~ 59 (64)
T 2cpw_A 21 SALDVLLS-MGFPRARAQKALASTGGRSVQTACDWLFSHS 59 (64)
T ss_dssp CHHHHHHH-HTCCHHHHHHHHHHTTTSCHHHHHHHHHSCC
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHcCCCCHHHHHHHHHhCC
Confidence 56899998 49999999999999999 9999999998764
No 108
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=94.12 E-value=0.11 Score=36.12 Aligned_cols=68 Identities=12% Similarity=0.031 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC-CCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
...+..+|..|-......|+.+-+..++..+|+ .+.+-.+-.+-..+....-|.|+.+||+.-|..+.
T Consensus 39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 39 VSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence 467888999994333469999999999999997 66655555555566666779999999999998863
No 109
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=94.11 E-value=0.2 Score=33.53 Aligned_cols=67 Identities=13% Similarity=0.129 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.++|..|-+.++ ..|+.+-+..++.. ||..+.+-.+--+-..+....-|.|+-+||+..|..+
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 3578889999953334 38999999999986 7777665555555555666778999999999998875
No 110
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=94.11 E-value=0.49 Score=34.30 Aligned_cols=66 Identities=2% Similarity=-0.060 Sum_probs=52.3
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+..+..+
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 158 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV 158 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 567778888754334699999999999999988776666566666666677999999999999873
No 111
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=94.08 E-value=0.3 Score=33.88 Aligned_cols=68 Identities=6% Similarity=-0.004 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH--hhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW--HMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~--~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+...|..|-......|+.+-+.+++..+|..+.+-.+-.+.. .+....-|.|+.+||+..+..-
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 152 (159)
T 2ovk_C 83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp CHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhcC
Confidence 4677888999884323469999999999999998776655555555 5566677999999999988764
No 112
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=94.07 E-value=0.52 Score=32.82 Aligned_cols=63 Identities=6% Similarity=-0.013 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC-CCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.++|..|-......|+.+-+..++..+|+ .|....+-.+.... -|.|+.++|+..|...
T Consensus 24 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~ 87 (166)
T 2mys_B 24 IEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEK 87 (166)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHH
Confidence 456777787774333358888888888888888 76543332222211 4667777777666653
No 113
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=94.06 E-value=0.15 Score=36.16 Aligned_cols=123 Identities=9% Similarity=0.101 Sum_probs=74.4
Q ss_pred CCCcchHHHHH-HHHHH----hC-CCHHHHHHHHHhCCCCch-hhhhhhhcc----CCCCC---------------cCCH
Q 031969 3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLE-GAFDVFYSQ----PQSKS---------------LTDT 56 (150)
Q Consensus 3 ~l~~~~~~~i~-~F~~i----T~-~~~~~A~~~L~~~~w~le-~Ai~~f~~~----~~~~~---------------~~~~ 56 (150)
.|++.+.+.++ -|..+ .| .+...-..+|...++++. ..+...|.. ..+.= ....
T Consensus 4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~ 83 (179)
T 2f2o_A 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE 83 (179)
T ss_dssp --CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccH
Confidence 35665555443 45444 12 356677778888777663 334444421 11100 0123
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID 125 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d 125 (150)
..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+.-+...+..
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~ 152 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGG 152 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC----
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCC
Confidence 457788888843334689999999999999988766555556666677777999999999998876543
No 114
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=94.02 E-value=0.044 Score=34.73 Aligned_cols=64 Identities=13% Similarity=0.041 Sum_probs=50.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~ 119 (150)
...+.++|..|-......|+.+-+.+.+..+|..+..-.+-.+...+....-|.|+.++|+..+
T Consensus 22 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 22 IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3557888999854334699999999999999998877666666667777778999999998754
No 115
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=94.01 E-value=0.25 Score=37.17 Aligned_cols=66 Identities=6% Similarity=-0.057 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+.++|+.|-......|+.+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus 50 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~ 115 (220)
T 3sjs_A 50 YTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKF 115 (220)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 356667777774433458888888888888888776666555666666666677777777777665
No 116
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=93.92 E-value=0.16 Score=34.71 Aligned_cols=67 Identities=10% Similarity=0.130 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-|..
T Consensus 81 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 4578899999884433469999999999999998877666555555666667799999999987753
No 117
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=93.92 E-value=0.22 Score=32.94 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.++|..|-..++ ..|+.+-+..++.. ||..+.+-.+--+-..+....-|.|+-+||+..|..+
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 3578889999962233 49999999999986 6766554444444455666677999999999988763
No 118
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=93.86 E-value=0.38 Score=35.16 Aligned_cols=64 Identities=8% Similarity=-0.019 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....|.++|..|-......|+.+-+..++..||+.+....+-.+...+ -|.|+.++|+..|...
T Consensus 55 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~ 118 (196)
T 3dtp_E 55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDR 118 (196)
T ss_dssp THHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHH
Confidence 357899999998543346999999999999999998766554444433 6888888888888764
No 119
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=93.84 E-value=0.062 Score=36.85 Aligned_cols=64 Identities=6% Similarity=0.093 Sum_probs=49.3
Q ss_pred HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhh-cccccccccHHHHHHHhHHc
Q 031969 59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM-KAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l-~a~~~g~~tr~eF~~g~~~l 122 (150)
+.++|..|-......|+.+-+..++..+|+.|....+-.+...+ ....-|.|+.++|+..+...
T Consensus 6 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~ 70 (148)
T 1m45_A 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVN 70 (148)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHH
Confidence 45678887543346999999999999999999877666666666 66777999999999998875
No 120
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=93.84 E-value=0.16 Score=36.32 Aligned_cols=67 Identities=15% Similarity=0.215 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHH-----HHHhhcCCCCCcH-----HHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~-----~~~edLgv~ped~-----~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..++.++|+.|-......|+.+-+. ..+..+|+.|... .+-.+...+....-|.|+.+||+..|..+
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~ 95 (195)
T 1qv0_A 19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQL 95 (195)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHH
Confidence 4678889998843334699999998 7889999998765 23334445556667999999999987653
No 121
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=93.83 E-value=0.13 Score=35.57 Aligned_cols=67 Identities=7% Similarity=0.082 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+-..+....-|.|+.+||+..|..+
T Consensus 94 ~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 160 (161)
T 1dtl_A 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160 (161)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence 4567778887743333588888888888888876655555555555666667889999998887653
No 122
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=93.82 E-value=0.28 Score=33.79 Aligned_cols=64 Identities=14% Similarity=0.150 Sum_probs=44.1
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
..+.+.|..|-......|+.+-+.+++..+|..+.+..+--+...+....-|.|+.+||+..|.
T Consensus 79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 79 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 5677788877332335888888888888888776555544444555555668888888887653
No 123
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=93.80 E-value=0.37 Score=33.41 Aligned_cols=66 Identities=11% Similarity=0.037 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...|.++|..|-+.++ ..|+.+-+..++.. ||..+.+-.+--+-..+....-|.|+-+||+..|..
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 4678889999963333 38999999999976 777776555555555666677899999999998875
No 124
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=93.79 E-value=0.1 Score=33.97 Aligned_cols=65 Identities=14% Similarity=0.052 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcC-CCCC-ccchHHHHHHH-hhcCCCC--CcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKD-PYLD-MILVDGITLLC-NDLQVDP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~-edLgv~p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|..+|..|-. .... .|+.+-+..++ ..+|..+ +++. -+-..+....-|.|+.+||+..|..+
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~--~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGAD--VWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHH--HHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHH--HHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3578889999965 4445 89999999999 7888543 4442 33344555567999999999998765
No 125
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=93.62 E-value=0.32 Score=32.90 Aligned_cols=66 Identities=6% Similarity=-0.024 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+... ....-|.|+.++|+.-|.+
T Consensus 83 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 83 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 45778888888854344689999999999999977655444444444 5556699999999987754
No 126
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=93.56 E-value=0.2 Score=35.40 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+.++|..|-......|+.+-+...+..+|..+.+-.+-.+-..+....-|.|+.++|+..|..
T Consensus 47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~ 112 (147)
T 1wy9_A 47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLG 112 (147)
T ss_dssp HHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 456778888874333369999999999999999987766666666666677799999999998865
No 127
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=93.53 E-value=0.24 Score=34.14 Aligned_cols=66 Identities=9% Similarity=0.018 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
....+..+|..|-......|+.+-+.+++..+|....+-.+-.+...+.. .-|.|+.++|+.-|..
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~~~ 148 (153)
T 2ovk_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIKGK 148 (153)
T ss_dssp CTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHHhc
Confidence 45788999999843334699999999999999988766666666666666 7799999999998875
No 128
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=93.49 E-value=0.25 Score=35.01 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.++|+..|...
T Consensus 49 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 115 (150)
T 2jjz_A 49 LTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115 (150)
T ss_dssp HHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred HHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 5678888888843333699999999999999998876665555556666677999999999998764
No 129
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=93.45 E-value=0.07 Score=37.50 Aligned_cols=41 Identities=20% Similarity=0.370 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ 49 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~ 49 (150)
.+.|++.+++=-.++..+++.|..++||++.||+..|+.+.
T Consensus 67 ~~qL~qL~eMGF~d~~~ni~AL~~t~Gdve~AVe~L~~~~~ 107 (108)
T 2cwb_A 67 QPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGA 107 (108)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHHHhcCC
Confidence 56788888754346789999999999999999999997653
No 130
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=93.38 E-value=0.97 Score=32.04 Aligned_cols=109 Identities=10% Similarity=0.027 Sum_probs=71.0
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhC-----CCCc-----hhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHH
Q 031969 9 RDKLQQFVSITGASEKAALQALKAS-----DWHL-----EGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDG 78 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~-----~w~l-----e~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG 78 (150)
++.++.+...|+.++..-..+.+.. +..+ ..++..... .......+..+|..|-......|+.+-
T Consensus 10 ~~~l~~l~~~~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~e 84 (190)
T 1fpw_A 10 KDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFP-----FGSPEDFANHLFTVFDKDNNGFIHFEE 84 (190)
T ss_dssp THHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCT-----TSCCSHHHHHHHHTCCSSCSSEECHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcC-----CCCcHHHHHHHHHHHCCCCCCcEeHHH
Confidence 4567778777888877655554432 2222 111111111 112345688899888543446899999
Q ss_pred HHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 79 ITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 79 ~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...++..++..+..-.+-.+-..+-...-|.|+.+||+..+..+
T Consensus 85 f~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~ 128 (190)
T 1fpw_A 85 FITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128 (190)
T ss_dssp HHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 99999999987655444444455566677999999999999883
No 131
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=93.38 E-value=0.63 Score=32.84 Aligned_cols=65 Identities=9% Similarity=0.105 Sum_probs=49.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+..+..+
T Consensus 77 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~ 141 (173)
T 1alv_A 77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL 141 (173)
T ss_dssp HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH
Confidence 56777888885434469999999999999999876544444444444 566999999999998863
No 132
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=93.35 E-value=0.25 Score=31.97 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhcCCCC-C-ccchHHHHHHHh-hcC----CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL-D-MILVDGITLLCN-DLQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~e-dLg----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+..+|..|-+.++ . .|+.+-+..++. .+| ..+....+--+-..+....-|.|+.+||+..|..+
T Consensus 12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3578899999963443 5 899999999998 443 55544444444455666677999999999988764
No 133
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=93.28 E-value=0.78 Score=32.16 Aligned_cols=64 Identities=5% Similarity=0.036 Sum_probs=47.9
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-......|+.+-+.+++..+|..+..-.+-.+...+ ..-|.|+.+||+..+..+
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 135 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL 135 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH
Confidence 5677888888543346999999999999999876544433333333 556999999999988774
No 134
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=93.26 E-value=0.21 Score=36.50 Aligned_cols=70 Identities=7% Similarity=-0.021 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 124 (150)
....+..+|..|-......|+.+-...++..+.-....-.+..+-..+-...-|.|+++||...+..+|.
T Consensus 44 ~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~ 113 (188)
T 1s6i_A 44 MESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL 113 (188)
T ss_dssp CHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC
T ss_pred CHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC
Confidence 3455555565553322245665555555544332111111111112223334466666666666666553
No 135
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=93.25 E-value=0.25 Score=35.96 Aligned_cols=69 Identities=12% Similarity=0.047 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc-CCCCCcHHHHHHHHh----hcccccccccHHHHHHHhHHcCC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVVSWH----MKAATMCEFSKQEFIGGLQSLGI 124 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-gv~ped~~~LvLa~~----l~a~~~g~~tr~eF~~g~~~l~~ 124 (150)
...+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+... +....-|.|+.+||+..+...++
T Consensus 113 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 186 (202)
T 2bec_A 113 RNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDV 186 (202)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSCH
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhCc
Confidence 5678889999854334699999999999999 977655444333333 56666799999999998887643
No 136
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=93.22 E-value=0.51 Score=31.62 Aligned_cols=68 Identities=9% Similarity=-0.011 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
...|.+.|..|-+.++ ..|+.+-+..++.. ||..+.+-.+--+-..+-...=|.|+-+||+..+..+-
T Consensus 10 i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~~ 84 (98)
T 3n22_A 10 LAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALIT 84 (98)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 3678889999964333 49999999999985 56565555555555556666679999999999887653
No 137
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=93.14 E-value=0.27 Score=32.07 Aligned_cols=65 Identities=5% Similarity=-0.005 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.+.|+.|-......|+.+-+..++..+|++.+++.-+ -..+....-|.|+.+||+..|..+
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i--~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHI--WELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHH--HHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHH--HHHHCCCCCCCCCHHHHHHHHHHH
Confidence 45677788888543346999999999999999765544332 233455567999999999998764
No 138
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=93.13 E-value=0.47 Score=33.54 Aligned_cols=64 Identities=11% Similarity=-0.017 Sum_probs=33.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhc-C-------CCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDL-Q-------VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-g-------v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
+++.++|..|- .....|+.+-+...+..+ | ..+..-.+--+...+....-|.++.+||+..|..
T Consensus 4 ~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 75 (173)
T 1alv_A 4 RQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN 75 (173)
T ss_dssp HHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred hHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence 45566666664 222466666666666665 5 3333333333334444444566666666655543
No 139
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=93.12 E-value=0.23 Score=33.67 Aligned_cols=62 Identities=8% Similarity=-0.015 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG 118 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g 118 (150)
...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+..
T Consensus 78 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~ 139 (142)
T 2bl0_C 78 EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINT 139 (142)
T ss_dssp HHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHH
Confidence 344455555442211235555555555555554443333333333333 34455555555543
No 140
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=93.08 E-value=0.46 Score=32.70 Aligned_cols=69 Identities=9% Similarity=0.026 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHH----HhhcCCCCCcHHHHHH-----------HHhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLL----CNDLQVDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~----~edLgv~ped~~~LvL-----------a~~l~a~~~g~~tr~eF~~g~~ 120 (150)
..+|.++|..|-......|+.+-+... +..+|+.|....+-.+ -..+....-|.|+.+||+..+.
T Consensus 3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~ 82 (166)
T 3akb_A 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV 82 (166)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHH
T ss_pred HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 367889999984333468999988886 5677999876554433 2455556679999999999988
Q ss_pred HcCC
Q 031969 121 SLGI 124 (150)
Q Consensus 121 ~l~~ 124 (150)
.+..
T Consensus 83 ~~~~ 86 (166)
T 3akb_A 83 KRLR 86 (166)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7643
No 141
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=93.04 E-value=1.1 Score=31.62 Aligned_cols=111 Identities=8% Similarity=0.000 Sum_probs=68.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhC-----CCCchhhhhhhhcc--CCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHH
Q 031969 10 DKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQ--PQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLL 82 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~~-----~w~le~Ai~~f~~~--~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~ 82 (150)
+.++++...|+.++.....+.+.. +..+. .+.|..- ..+........+..+|..|-......|+.+-...+
T Consensus 4 ~el~~l~~~~~~s~~~i~~l~~~fd~~d~~G~i~--~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~ 81 (183)
T 1s6c_A 4 EGLEQLEAQTNFTKRELQVLYRGFKNEXPSGVVN--EETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA 81 (183)
T ss_dssp --CHHHHHHSSCCHHHHHHHHHHHHHHCTTSEEC--HHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCC--HHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 446677777888877655554432 22121 1111100 00011246788899999986544468999999999
Q ss_pred HhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 83 CNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 83 ~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
+..++..+..-.+-.+-..+-...-|.|+.+||...+..+
T Consensus 82 ~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~ 121 (183)
T 1s6c_A 82 LSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 121 (183)
T ss_dssp HHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 9888765543333334445556677999999999999886
No 142
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=93.03 E-value=0.56 Score=32.15 Aligned_cols=64 Identities=11% Similarity=0.063 Sum_probs=40.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
..+...|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..|.
T Consensus 83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 4456677666322235788888888888787665554444444455555567788888877654
No 143
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=93.01 E-value=0.36 Score=34.26 Aligned_cols=62 Identities=6% Similarity=-0.061 Sum_probs=49.0
Q ss_pred HHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 61 ~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
.+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..|..+
T Consensus 113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~ 174 (191)
T 1uhk_A 113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF 174 (191)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 78888843334699999999999999988766655555566666667999999999998864
No 144
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=92.99 E-value=0.25 Score=35.69 Aligned_cols=47 Identities=13% Similarity=0.019 Sum_probs=19.3
Q ss_pred ccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969 73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~ 119 (150)
.|+.+-+...+..+|+.+....+-.+-..+....-|.|+.+||+..+
T Consensus 53 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~ 99 (204)
T 3e3r_A 53 SLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRAL 99 (204)
T ss_dssp SBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHT
T ss_pred CcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHH
Confidence 44444444444444444433333333333333333444444444443
No 145
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=92.98 E-value=0.41 Score=32.58 Aligned_cols=65 Identities=8% Similarity=0.068 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|+.|-......|+.+-+..++...+++.+++. -+-..+....-|.|+.+||+..|..+
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~--~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLA--SIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHH--HHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHH--HHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 567888999984433469999999999985554443333 23334555667999999999988764
No 146
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=92.91 E-value=0.051 Score=34.47 Aligned_cols=39 Identities=21% Similarity=0.280 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhC-CCCchhhhhhhhccC
Q 031969 9 RDKLQQFVSITGASEKAALQALKAS-DWHLEGAFDVFYSQP 48 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~-~w~le~Ai~~f~~~~ 48 (150)
.+.|.++++ .|-++..|++.|..+ +||++.|++-.|+..
T Consensus 10 ~~~v~~L~~-MGF~~~~a~~AL~~t~~~nve~A~ewLl~~~ 49 (64)
T 1whc_A 10 LTALESLIE-MGFPRGRAEKALALTGNQGIEAAMDWLMEHE 49 (64)
T ss_dssp CCHHHHHHT-TTCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHhcCCCHHHHHHHHHhCC
Confidence 457899998 599999999999999 799999999888754
No 147
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=92.90 E-value=0.22 Score=33.68 Aligned_cols=65 Identities=9% Similarity=0.050 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+.. .-|.|+.+||+.-|..
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 4788889988844334689999999999999987766555555566666 6789999999987753
No 148
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=92.88 E-value=0.32 Score=31.94 Aligned_cols=66 Identities=6% Similarity=0.055 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+.++|..|-......|+.+-+..++..+|++.+++.-+ -..+....-|.|+.+||+..|..+
T Consensus 8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i--~~~~D~d~dG~i~~~EF~~~~~~~ 73 (95)
T 1c07_A 8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHI--WSLCDTKDCGKLSKDQFALAFHLI 73 (95)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHH--HHHHCTTCSSSEETTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHH--HHHHCCCCCCcCCHHHHHHHHHHH
Confidence 357788999999543346999999999999999765443332 223455567999999999988663
No 149
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=92.85 E-value=0.16 Score=34.50 Aligned_cols=61 Identities=11% Similarity=0.132 Sum_probs=36.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
..+.++|..|-......|+.+-+..++..+|+.|....+-.+ +.. .-|.|+.++|+..|..
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~---~~~-~~g~i~~~eF~~~~~~ 67 (143)
T 3j04_B 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGM---MSE-APGPINFTMFLTMFGE 67 (143)
T ss_dssp HHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTT---TTT-SSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHH---HHh-CCCCcCHHHHHHHHHH
Confidence 456666666633223578888888888888887754332222 111 4466666666666654
No 150
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=92.84 E-value=0.31 Score=32.54 Aligned_cols=65 Identities=14% Similarity=0.053 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|+.|-......|+.+-+.+++..+|++.+.+. -+-..+....-|.|+++||+..|..+
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~--~i~~~~D~d~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILG--KIWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHH--HHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHH--HHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 467889999985433469999999999999997543322 22234455567999999999998764
No 151
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=92.81 E-value=0.39 Score=36.06 Aligned_cols=75 Identities=9% Similarity=-0.035 Sum_probs=53.6
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~ 136 (150)
..+..+|..|-......|+.+-+.+++..+|....+-.+-.+...+. ..-|.|+.+||++.|..+ ..++.....
T Consensus 117 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l-----~~~~~~F~~ 190 (220)
T 3sjs_A 117 ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFA-----AQTRSAYQM 190 (220)
T ss_dssp HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHH-----HHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH-----HHHHHHHHH
Confidence 56777888874333469999999999999998876655555666666 666999999999998874 344444444
Q ss_pred H
Q 031969 137 M 137 (150)
Q Consensus 137 l 137 (150)
+
T Consensus 191 ~ 191 (220)
T 3sjs_A 191 I 191 (220)
T ss_dssp H
T ss_pred h
Confidence 3
No 152
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=92.79 E-value=0.36 Score=41.47 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=53.3
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
..|.++|+.|-......|+.+-+...+..||++|.+-.+--|-..+....-|.|+-+||+..+..
T Consensus 302 ~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~ 366 (440)
T 3u0k_A 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMAR 366 (440)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 55777888875434469999999999999999998877777777777778899999999988765
No 153
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=92.77 E-value=0.22 Score=34.34 Aligned_cols=61 Identities=11% Similarity=0.100 Sum_probs=33.7
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
..+.++|..|-......|+.+-+..++..+|+.|....+-.+...+ -|.|+.++|+..|..
T Consensus 16 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~ 76 (153)
T 2ovk_B 16 QELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGE 76 (153)
T ss_dssp HHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTT
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHH
Confidence 4566666666332235777777777777777776554433333222 445555555555443
No 154
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=92.69 E-value=0.64 Score=31.95 Aligned_cols=63 Identities=6% Similarity=-0.040 Sum_probs=46.5
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
.+..+|..|-......|+.+-+.+++..+|++.+.+. .+...+....-|.|+.+||+..+..+
T Consensus 99 ~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~--~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 99 FLHAALGVADTDGDGAVTVADTARALTAFGVPEDLAR--QAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3888898774433469999999999999994444333 33344556667999999999988764
No 155
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=92.68 E-value=2 Score=30.95 Aligned_cols=112 Identities=8% Similarity=-0.010 Sum_probs=72.8
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhC-----CCCchhhhhhhhcc--CCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHH
Q 031969 9 RDKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFYSQ--PQSKSLTDTRHLEELYNRYKDPYLDMILVDGITL 81 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~-----~w~le~Ai~~f~~~--~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~ 81 (150)
.+.+..++..+|.++.....+.+.. +..|. .+.|..- ...........+..+|..|-......|+.+-...
T Consensus 18 ~~el~~~~~~~~~~~~~i~~~f~~~d~~~~~G~i~--~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~ 95 (207)
T 2d8n_A 18 KEILEELQLNTKFSEEELCSWYQSFLKDCPTGRIT--QQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVI 95 (207)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHHHHHHHCTTSEEE--HHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCC--HHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHH
Confidence 4567788888888877766665542 22231 1222110 0011123567899999998654446899999999
Q ss_pred HHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 82 LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 82 ~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
++..++..+..-.+-.+-..+-...-|.|+.+||+..+..+
T Consensus 96 ~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~ 136 (207)
T 2d8n_A 96 ALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI 136 (207)
T ss_dssp HHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence 99998865543333334445566677999999999999885
No 156
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=92.67 E-value=0.32 Score=34.56 Aligned_cols=64 Identities=13% Similarity=0.186 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhc-ccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMK-AATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~-a~~~g~~tr~eF~~g~~~l 122 (150)
...++.++|+.+. +.+..|+.+-+..++...|++.+. |.=-|.+- ...-|.++++||+-+|.-+
T Consensus 31 e~~~y~~iF~~lD-~~dG~Isg~elr~~~~~sgLp~~~---L~~Iw~laD~d~dG~Ld~~EF~~aM~Li 95 (121)
T 3fia_A 31 ERAKHDQQFHSLK-PISGFITGDQARNFFFQSGLPQPV---LAQIWALADMNNDGRMDQVEFSIAMKLI 95 (121)
T ss_dssp HHHHHHHHHHHTC-CBTTBEEHHHHHHHHGGGCCCHHH---HHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHcCCCHHH---HHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 4678899999995 455799999999999999987554 33335444 4456999999999998764
No 157
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=92.60 E-value=0.69 Score=32.29 Aligned_cols=64 Identities=3% Similarity=-0.053 Sum_probs=47.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+ ..-|.|+.+||+..+..+
T Consensus 70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 133 (165)
T 1k94_A 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL 133 (165)
T ss_dssp HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence 5678888888543346999999999999999876544333333333 566999999999998774
No 158
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=92.59 E-value=0.89 Score=31.23 Aligned_cols=62 Identities=11% Similarity=0.162 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+.++|..|-......|+.+-+..++..+|+.|....+-.+. . ..-|.|+.++|+..|..
T Consensus 17 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~~ 78 (156)
T 1wdc_B 17 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML---K-EAPGPLNFTMFLSIFSD 78 (156)
T ss_dssp HHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH---T-TSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH---H-hCCCcCcHHHHHHHHHH
Confidence 35677778777433335888888888888888877654332222 1 23467777777776664
No 159
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=92.59 E-value=0.38 Score=34.35 Aligned_cols=62 Identities=8% Similarity=0.053 Sum_probs=47.8
Q ss_pred HHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 61 ~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
.+|..|=......|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..+..+
T Consensus 117 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 178 (195)
T 1qv0_A 117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF 178 (195)
T ss_dssp HHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 78888743334699999999999999988766665556666666677999999999998875
No 160
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=92.53 E-value=0.82 Score=33.31 Aligned_cols=64 Identities=9% Similarity=0.126 Sum_probs=50.6
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL----gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+.+.|..|- .....|+.+-+...+..+ |..+.+..+-.+...+. ..-|.|+.+||+.-|..+
T Consensus 76 ~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~ 143 (174)
T 2i7a_A 76 VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL 143 (174)
T ss_dssp HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH
Confidence 57888999996 444699999999999999 99886655544445555 567999999999988763
No 161
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.52 E-value=0.12 Score=33.64 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhCC-CCchhhhhhhhccC
Q 031969 8 NRDKLQQFVSITGASEKAALQALKASD-WHLEGAFDVFYSQP 48 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~-w~le~Ai~~f~~~~ 48 (150)
..+.|+++++ .|-++..|++.|..++ ||++.|++-.|+..
T Consensus 9 ~e~~v~~L~~-MGF~~~~a~~AL~~t~n~~ve~A~ewL~~~~ 49 (74)
T 2dag_A 9 DESVIIQLVE-MGFPMDACRKAVYYTGNSGAEAAMNWVMSHM 49 (74)
T ss_dssp CHHHHHHHHH-HSCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHH-cCCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 4678999999 5999999999999998 58999999888653
No 162
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=92.48 E-value=1.2 Score=32.33 Aligned_cols=117 Identities=8% Similarity=-0.004 Sum_probs=74.7
Q ss_pred CCcchHHHHH-HHHHH----hC-CCHHHHHHHHHhCCCCch-hhhhhhhccCCC---------------CCcCCHHHHHH
Q 031969 4 LSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLE-GAFDVFYSQPQS---------------KSLTDTRHLEE 61 (150)
Q Consensus 4 l~~~~~~~i~-~F~~i----T~-~~~~~A~~~L~~~~w~le-~Ai~~f~~~~~~---------------~~~~~~~~l~~ 61 (150)
|+..+...++ -|..+ .| .+...-..+|...+.++. .-+..++....+ ........+..
T Consensus 51 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~ 130 (196)
T 3dtp_E 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVN 130 (196)
T ss_dssp SCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4555544443 45444 12 356666777777776652 223333332211 12234678888
Q ss_pred HHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 62 LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 62 lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
+|..|-......|+.+-+.+++ .+|..+.+-.+-.|...+....-|.|+.++|+.-|..
T Consensus 131 ~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 189 (196)
T 3dtp_E 131 AFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK 189 (196)
T ss_dssp HHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred HHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence 9988843334699999999999 9998776655555555565566799999999988765
No 163
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=92.44 E-value=0.16 Score=33.75 Aligned_cols=66 Identities=8% Similarity=0.129 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.+.|..|-+.++ .|+.+-+..++.. ||..+.+-.+--+-..+....-|.|+-+||+..|..+
T Consensus 8 ~~~l~~~F~~fD~~dg-~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 8 METMMFTFHKFAGDKG-YLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHHGGGC-SBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCC-eECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3567888999863234 9999999999875 6666655444445555666777999999999988763
No 164
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=92.43 E-value=0.59 Score=32.58 Aligned_cols=64 Identities=13% Similarity=-0.008 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+..+|..|-......|+.+-+.+++..+|++++.+..+ -..+....-|.|+.+||+..|..
T Consensus 93 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~--~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHH--HHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHH--HHHhCCCCCceEeHHHHHHHHHH
Confidence 36788899988543446999999999999999877665433 33345566799999999998865
No 165
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=92.41 E-value=0.3 Score=35.42 Aligned_cols=67 Identities=6% Similarity=-0.039 Sum_probs=41.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
..+..+|..|-...+..|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+..++
T Consensus 52 ~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~ 118 (198)
T 2r2i_A 52 KYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIR 118 (198)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 3477777776443335777777777777777655433333333344455567777777777777654
No 166
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=92.40 E-value=0.37 Score=33.85 Aligned_cols=67 Identities=7% Similarity=-0.004 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhcCCCC-CccchHHHHHHHhhcC----CCCCcHHHHHH-----------HHhhcccccccccHHHHHHHh
Q 031969 56 TRHLEELYNRYKDPYL-DMILVDGITLLCNDLQ----VDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edLg----v~ped~~~LvL-----------a~~l~a~~~g~~tr~eF~~g~ 119 (150)
.+++..+|+.|.|.++ ..|+.+-+...+..++ ..|....+-.| ...+....-|.|+.+||+..|
T Consensus 7 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 86 (185)
T 2sas_A 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence 5778999999944333 5999999999999988 77765544333 444555667999999999998
Q ss_pred HHc
Q 031969 120 QSL 122 (150)
Q Consensus 120 ~~l 122 (150)
..+
T Consensus 87 ~~~ 89 (185)
T 2sas_A 87 EKT 89 (185)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 167
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=92.34 E-value=0.55 Score=32.08 Aligned_cols=66 Identities=6% Similarity=0.009 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+.++|+.|-......|+.+-+..++..+|++.+++.-++ ..+....-|.|+.+||+..|...
T Consensus 20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~--~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIW--ELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHH--HHHCSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHH--HHHcCCCCCcCcHHHHHHHHHHH
Confidence 4678999999995433469999999999999998777655432 23455667999999999988764
No 168
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=92.22 E-value=0.18 Score=33.67 Aligned_cols=40 Identities=25% Similarity=0.256 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhC-CCCchhhhhhhhccC
Q 031969 8 NRDKLQQFVSITGASEKAALQALKAS-DWHLEGAFDVFYSQP 48 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~-~w~le~Ai~~f~~~~ 48 (150)
..+.|.++++ .|-++..|++.|..+ |||++.|++-.|+..
T Consensus 29 ~e~~v~~L~~-MGF~~~~a~~AL~~t~n~n~e~A~ewL~~h~ 69 (84)
T 1vek_A 29 NEEIVAQLVS-MGFSQLHCQKAAINTSNAGVEEAMNWLLSHM 69 (84)
T ss_dssp CHHHHHHHHH-HTCCHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHH-cCCCHHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 4678999999 499999999999988 599999999888653
No 169
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=92.19 E-value=0.61 Score=33.02 Aligned_cols=69 Identities=12% Similarity=0.151 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHhcC-CCCCccchHHHHHHHhhcCCC-CCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 55 DTRHLEELYNRYKD-PYLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d-~~~d~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
+...+.++|..|.. .....|+.+-+..++..+|.. +....+-.+-..+....-|.|+.+||+..+..++
T Consensus 16 s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~ 86 (183)
T 1s6c_A 16 TKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL 86 (183)
T ss_dssp CHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHc
Confidence 45667777766653 234689999999999999976 4444444555666677789999999999988653
No 170
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=92.17 E-value=0.76 Score=31.24 Aligned_cols=32 Identities=9% Similarity=0.060 Sum_probs=19.3
Q ss_pred ccccccHHHHHHHhHHcCCC-CHHHHHHHHHHH
Q 031969 106 TMCEFSKQEFIGGLQSLGID-SLDKFRERISFM 137 (150)
Q Consensus 106 ~~g~~tr~eF~~g~~~l~~d-si~~lk~~l~~l 137 (150)
.-|.||+++|...+..+|.. |.+.++..+..+
T Consensus 97 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 129 (146)
T 2qac_A 97 CTGYLTKSQMKNILTTWGDALTDQEAIDALNAF 129 (146)
T ss_dssp CSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc
Confidence 34777777777777777643 444444444443
No 171
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=92.05 E-value=0.29 Score=32.27 Aligned_cols=67 Identities=12% Similarity=0.055 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcCCCC-C-ccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL-D-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.++|..|-+.++ . .|+.+-+..++.. ||..+.+-.+--+-..+....-|.|+-+||+..|..+
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~ 84 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 84 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 3578889999963344 3 8999999999976 6766655444444444555567999999999988753
No 172
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=91.99 E-value=1.8 Score=29.97 Aligned_cols=62 Identities=10% Similarity=0.084 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
+..+|..|-......|+.+-+.+++..+|++.+.+. .+-..+....-|.|+.+||+..+..+
T Consensus 104 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~--~~~~~~D~d~dg~i~~~ef~~~~~~~ 165 (176)
T 1nya_A 104 VKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAA--EAFNQVDTNGNGELSLDELLTAVRDF 165 (176)
T ss_dssp HHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCSSEEEHHHHHHHHSCC
T ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 444555443222235555555555555552222221 11222233334555555555555443
No 173
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=91.95 E-value=0.71 Score=31.26 Aligned_cols=67 Identities=10% Similarity=0.093 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.+.|..|-+.++ ..|+.+-+..++.. ||..+.+-.+--+-..+-...=|.|+-+||+.-+..+
T Consensus 9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3578889999964333 69999999999985 4666665555455555666677999999999877654
No 174
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=91.87 E-value=0.39 Score=35.87 Aligned_cols=69 Identities=10% Similarity=0.021 Sum_probs=52.7
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCc------HHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD------IVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped------~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
....+.|.++|..|-......|+.+-+...+..||+.|.. ..+--+...+....-|.|+.+||+..|..
T Consensus 12 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~ 86 (263)
T 2f33_A 12 LITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPT 86 (263)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTS
T ss_pred cccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 3457889999999964344699999999999999887653 33334455566677899999999998753
No 175
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=91.82 E-value=0.36 Score=35.41 Aligned_cols=66 Identities=6% Similarity=0.012 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...|.++|..|-......|+.+-+...+..+|..+....+-.+...+....-|.|+.+||+..+..
T Consensus 56 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~ 121 (197)
T 3pm8_A 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID 121 (197)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 466777888874323358999999998888888876666666666666666678888888776543
No 176
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=91.77 E-value=0.66 Score=39.75 Aligned_cols=67 Identities=10% Similarity=0.112 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|..|-......|+.+-+..++..+|..+..-.+-.+-..+....-|.|+.+||+..|..+
T Consensus 311 i~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~ 377 (450)
T 3sg6_A 311 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 377 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC-
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhh
Confidence 3678889999843334699999999999999999877766666666777777999999999998764
No 177
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=91.74 E-value=0.22 Score=34.50 Aligned_cols=34 Identities=29% Similarity=0.357 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhh
Q 031969 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD 42 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~ 42 (150)
.+.|.-.++-||+|...|++.|+.|++|+-.||-
T Consensus 66 ~edi~lv~~q~~vs~~~A~~aL~~~~gDiv~Ai~ 99 (102)
T 1tr8_A 66 EDDIELVMNQTGASREDATRALQETGGDLAEAIM 99 (102)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHH
Confidence 3568888999999999999999999999987764
No 178
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=91.72 E-value=1.9 Score=32.25 Aligned_cols=112 Identities=10% Similarity=0.057 Sum_probs=68.7
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHh-----CCCCchhh-hhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHH
Q 031969 10 DKLQQFVSITGASEKAALQALKA-----SDWHLEGA-FDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLC 83 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~-----~~w~le~A-i~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ 83 (150)
+.+.+++..|+.++..-..+.+. .+..+... +...+.. -+........+..+|..+-...+..|+.+-...++
T Consensus 37 ~~l~~l~~~~~~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~-l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l 115 (224)
T 1s1e_A 37 EGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQ-FFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTAL 115 (224)
T ss_dssp -CHHHHHHHSSCCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHT-TCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHH-hcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 44778888888887776655543 22222110 1111111 01112457788899998854444689999999998
Q ss_pred hhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 84 NDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 84 edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus 116 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~ 154 (224)
T 1s1e_A 116 SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 154 (224)
T ss_dssp HHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred HHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence 887755433333333334455667999999999999876
No 179
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=91.62 E-value=0.55 Score=34.37 Aligned_cols=72 Identities=15% Similarity=0.126 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc-CCCCCcHHHHHH----HHhhcccccccccHHHHHHHhHHcCCCC
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVV----SWHMKAATMCEFSKQEFIGGLQSLGIDS 126 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-gv~ped~~~LvL----a~~l~a~~~g~~tr~eF~~g~~~l~~ds 126 (150)
....+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+ ...+....=|.|+.+||+..+...++..
T Consensus 111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~ 187 (208)
T 2ct9_A 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVEQ 187 (208)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSCGGG
T ss_pred HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccChHH
Confidence 45678888998854334699999999999987 977655443333 3445556679999999999998876653
No 180
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=91.59 E-value=0.22 Score=36.44 Aligned_cols=65 Identities=6% Similarity=0.123 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC--CCCcHHHHHHH-------HhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV--DPQDIVMLVVS-------WHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv--~ped~~~LvLa-------~~l~a~~~g~~tr~eF~~g~~ 120 (150)
..++.++|+.|-......|+.+-+...+..+|. .|....+--+. ..+....-|.|+.+||+..|.
T Consensus 35 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~ 108 (208)
T 2hpk_A 35 LSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR 108 (208)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 467889999985433469999999999999998 77655544444 566666779999999999987
No 181
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=91.59 E-value=1.1 Score=34.13 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=70.2
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhC-----CCCc-----hhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHH
Q 031969 10 DKLQQFVSITGASEKAALQALKAS-----DWHL-----EGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGI 79 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~~-----~w~l-----e~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~ 79 (150)
+.+.++...|+.++.....+.+.. +..+ ..++..++. .......+..+|..+-......|+.+-.
T Consensus 77 e~l~~l~~~~~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~dG~I~~~Ef 151 (256)
T 2jul_A 77 EGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFP-----QGDATTYAHFLFNAFDADGNGAIHFEDF 151 (256)
T ss_dssp THHHHHHHHTTSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCC-----SSCCHHHHHHHHHHSSCSCCSEECSHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcc-----cCCcHHHHHHHHHHhccCCCCcCcHHHH
Confidence 357888888888877766655442 2222 112222211 1234677888999885544468999999
Q ss_pred HHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 80 TLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 80 ~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..++..++..+..-.+-.+-..+-...-|.|+.+||...+..+
T Consensus 152 ~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~ 194 (256)
T 2jul_A 152 VVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194 (256)
T ss_dssp HHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 9999988766543333333334555667999999999999876
No 182
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=91.57 E-value=0.73 Score=31.33 Aligned_cols=65 Identities=5% Similarity=0.055 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
.....+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+ ..=|.|+.++|+.-|.
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp CCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred chHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 3567899999998433346899999999999999776544333333333 5569999999998764
No 183
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=91.51 E-value=2.7 Score=29.73 Aligned_cols=114 Identities=12% Similarity=0.061 Sum_probs=72.2
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHh-----CCCCchhh-hhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHH
Q 031969 8 NRDKLQQFVSITGASEKAALQALKA-----SDWHLEGA-FDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITL 81 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~-----~~w~le~A-i~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~ 81 (150)
.+..++.....|+.++..-..+.+. .+..|... +...+..- +........+..+|..|-......|+.+-...
T Consensus 9 ~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~ 87 (193)
T 1bjf_A 9 RPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNF-FPYGDASKFAEHVFRTFDANGDGTIDFREFII 87 (193)
T ss_dssp CHHHHHHHHHHSSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTT-SSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHh-cCcCChHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 3566778888899987765554433 23323110 11111111 11122456788999998543446899999999
Q ss_pred HHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 82 LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 82 ~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~ 128 (193)
T 1bjf_A 88 ALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI 128 (193)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHH
Confidence 99998876644443344445666778999999999998774
No 184
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=91.50 E-value=0.71 Score=33.50 Aligned_cols=64 Identities=9% Similarity=0.151 Sum_probs=40.8
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
+.|.+.|+.|=......|+.+-+...+..||++|.+..+--+...+....-|.++-.+|+..+.
T Consensus 11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~ 74 (176)
T 2lhi_A 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 74 (176)
T ss_dssp GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHH
Confidence 5677778777332335888888888888888888766655555445444455555555555443
No 185
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=91.44 E-value=1 Score=29.63 Aligned_cols=67 Identities=10% Similarity=0.055 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-cC----CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-Lg----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.+.|..|-+.++ ..|+.+-+..++.. || ..+.+-.+=-+-..+-...=|.|+-+||+..+..+
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 3678889999964333 59999999999985 76 22333333333444555666999999999988764
No 186
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=91.41 E-value=0.81 Score=29.69 Aligned_cols=65 Identities=12% Similarity=0.087 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhcCCCC-C-ccchHHHHHHHhh---cC-CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL-D-MILVDGITLLCND---LQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~ed---Lg-v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.+.|..|-+.++ . .|+.+-+..++.. +| ++++.+. -+-..+....-|.|+-+||+..+..+
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~--~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSID--DLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHH--HHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3578889999973343 5 8999999999986 44 3334333 33345566667999999999988764
No 187
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=91.38 E-value=0.86 Score=32.29 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=42.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
....+..+|..|-......|+.+-+.+++. |..+.+-.+-.+...+....-|.|+.+||+..|..
T Consensus 121 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 185 (191)
T 3khe_A 121 SRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 185 (191)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 346677778777332335788888888877 55555444444555555556688888888877765
No 188
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=91.30 E-value=2.5 Score=29.81 Aligned_cols=118 Identities=11% Similarity=0.083 Sum_probs=72.5
Q ss_pred CCCcchHHHHH-HHHHH----hCC-CHHHHHHHHHhCCCCch-hhhhhhhccCCC---------------CCcCCHHHHH
Q 031969 3 KLSRSNRDKLQ-QFVSI----TGA-SEKAALQALKASDWHLE-GAFDVFYSQPQS---------------KSLTDTRHLE 60 (150)
Q Consensus 3 ~l~~~~~~~i~-~F~~i----T~~-~~~~A~~~L~~~~w~le-~Ai~~f~~~~~~---------------~~~~~~~~l~ 60 (150)
+||..|.+.++ -|..+ .|. +...-...|++-+.+.. .-+..+.....+ ........|.
T Consensus 9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~ 88 (153)
T 3i5g_B 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALR 88 (153)
T ss_dssp TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHHH
Confidence 46666554443 34443 233 45556667777666652 223333322211 1123467899
Q ss_pred HHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 61 ~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
+.|..|=......|+.+-+.+.+..+|..+.+-.+=-+-..+... =|.|+-++|++-|..
T Consensus 89 ~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~ 148 (153)
T 3i5g_B 89 NAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK 148 (153)
T ss_dssp HHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred HHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence 999998443346999999999999999877554433333333333 599999999998764
No 189
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=91.23 E-value=0.58 Score=33.91 Aligned_cols=64 Identities=9% Similarity=0.016 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
...|.++|..|-......|+.+-+..+ ..||++|. +--|...+....-|.|+.+||+..+....
T Consensus 28 ~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~ 91 (202)
T 2bec_A 28 LLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFR 91 (202)
T ss_dssp HHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhc
Confidence 356777888884333468999999999 89999887 33344455566679999999999998764
No 190
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=91.23 E-value=1.8 Score=32.28 Aligned_cols=68 Identities=10% Similarity=0.049 Sum_probs=49.9
Q ss_pred CcCCHHHHHHHHHHhcCCCCCccchHHHHHHHh----hcCC--CCCcHHHHHHH----HhhcccccccccHHHHHHHh
Q 031969 52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCN----DLQV--DPQDIVMLVVS----WHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 52 ~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e----dLgv--~ped~~~LvLa----~~l~a~~~g~~tr~eF~~g~ 119 (150)
+......|.++|+.|-......|+.+-+...+. .||+ .|..-.+--+. ..+....-|.|+.+||+..+
T Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 83 (272)
T 2be4_A 6 ANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI 83 (272)
T ss_dssp CCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred HhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 345678999999999543346999999999998 9999 76544332222 34455567999999999983
No 191
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=91.20 E-value=0.52 Score=34.25 Aligned_cols=69 Identities=10% Similarity=0.052 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCC-CCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
+...+.++|..|... ....|+.+-+..++..++.. +....+--+-..+....-|.|+.+||+..+..++
T Consensus 31 ~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~ 101 (207)
T 2d8n_A 31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTT 101 (207)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHc
Confidence 567888899888643 24699999999999999886 4444444455556666779999999999998875
No 192
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=91.00 E-value=1 Score=31.99 Aligned_cols=73 Identities=11% Similarity=0.052 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCc-HHHHHHHHhhcccccccccHHHHHHHhHHcCCCC
Q 031969 54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS 126 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~ped-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds 126 (150)
.+...+.++|+.|... ....|+.+-+..++..+|..+.. ..+--+-..+-...-|.|+.+||+..+..++...
T Consensus 22 ~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~ 96 (193)
T 1bjf_A 22 FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK 96 (193)
T ss_dssp CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSC
T ss_pred CCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCC
Confidence 3567888999988643 24599999999999999887643 2233344455666779999999999998876543
No 193
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=90.98 E-value=0.95 Score=32.19 Aligned_cols=110 Identities=15% Similarity=0.022 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhC-----CCCchhhhhhhh---ccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHH
Q 031969 9 RDKLQQFVSITGASEKAALQALKAS-----DWHLEGAFDVFY---SQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGIT 80 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~-----~w~le~Ai~~f~---~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~ 80 (150)
.+.+..+...++.++.....+.+.. +..+. .+.|. ..-. ........+..+|..+-......|+.+-..
T Consensus 10 ~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~--~~e~~~~l~~~~-~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~ 86 (190)
T 2l2e_A 10 QDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLN--KSEFQKIYKQFF-PFGDPSAFAEYVFNVFDADKNGYIDFKEFI 86 (190)
T ss_dssp HHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEEC--HHHHHHHHHHHC-CCSCHHHHHHHHHHHHCSSSTTCEEHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCC--HHHHHHHHHHhC-CCCCccHHHHHHHHHhcCCCCCeEeHHHHH
Confidence 3457777777888766655554432 22231 12221 1111 112334567788888754334588888888
Q ss_pred HHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 81 ~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.++..++..+..-.+-.+-..+-...-|.|+.+||...+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 87 CALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp HHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 88888877654433333334455566688888888887765
No 194
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=90.90 E-value=0.31 Score=33.29 Aligned_cols=64 Identities=6% Similarity=-0.022 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
...+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+.-|.
T Consensus 86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 149 (151)
T 1w7j_B 86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL 149 (151)
T ss_dssp --CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence 355677888873323368999999999999998776655555555666 6679999999998764
No 195
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=90.83 E-value=1.4 Score=29.82 Aligned_cols=67 Identities=12% Similarity=0.065 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-cC----CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-Lg----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.+.|..|-+.++ ..|+.+-+..++.. || ..+.+-.+--+-..+-...=|.|+-+||+..+..+
T Consensus 12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 3678889999964444 49999999999985 65 33344444444444556667999999999988764
No 196
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=90.80 E-value=0.94 Score=31.65 Aligned_cols=65 Identities=9% Similarity=0.140 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+..+|..|-......|+.+-+.+++..+|++++.+..+. ..+-...=|.|+.+||+..+...
T Consensus 104 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~--~~~D~d~dG~i~~~ef~~~~~~~ 168 (185)
T 2sas_A 104 QNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYRL 168 (185)
T ss_dssp HHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHH--HHhcCCCCCcCcHHHHHHHHHHH
Confidence 467888999885434469999999999999998877655433 33445566999999999988764
No 197
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=90.75 E-value=1.4 Score=31.76 Aligned_cols=64 Identities=5% Similarity=0.027 Sum_probs=46.9
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-......|+.+-+.+++..+|..+.+-.+-.+...+ ..-|.|+.+||+..+..+
T Consensus 103 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~ 166 (198)
T 1juo_A 103 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL 166 (198)
T ss_dssp HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence 5677778777433336899999999999999876554443443444 556999999999998874
No 198
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=90.60 E-value=1.6 Score=29.53 Aligned_cols=84 Identities=7% Similarity=0.002 Sum_probs=53.2
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHh-hcccccccccHHHHHHHhHH-cCC-CCHHHHHHHH
Q 031969 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQS-LGI-DSLDKFRERI 134 (150)
Q Consensus 58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~-l~a~~~g~~tr~eF~~g~~~-l~~-dsi~~lk~~l 134 (150)
.+.++|..+-......|+.+-...++..+.........+..++. +-...-|.|++++|...+.. +|. -+.+.++..+
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 118 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 66777777754334578888888888877766555444444443 33445588888888888877 343 3455555555
Q ss_pred HHHHHHc
Q 031969 135 SFMRAEL 141 (150)
Q Consensus 135 ~~l~~~l 141 (150)
..+-..+
T Consensus 119 ~~~~~~~ 125 (155)
T 3ll8_B 119 DKTIINA 125 (155)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5544444
No 199
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=90.49 E-value=0.51 Score=34.62 Aligned_cols=67 Identities=9% Similarity=-0.051 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc--CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL--QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL--gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
....+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+...+....-|.|+.+||+.-|++
T Consensus 127 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 127 KKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp SHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 35677888888743333588888888888887 55544444444445555566688888888887764
No 200
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=90.46 E-value=3 Score=29.91 Aligned_cols=69 Identities=6% Similarity=0.003 Sum_probs=47.1
Q ss_pred HHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCcHH-HHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969 57 RHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGID 125 (150)
Q Consensus 57 ~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~ped~~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d 125 (150)
..+..+|..|-.. ....|+.+-+..++..+|++|.... +--+-..+....-|.|+.+||+..|..++..
T Consensus 14 ~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~ 84 (198)
T 2r2i_A 14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKG 84 (198)
T ss_dssp SCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccC
Confidence 4566777777533 2357888888888888888876543 3334445556667888888888888876543
No 201
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=90.44 E-value=1.4 Score=31.13 Aligned_cols=110 Identities=11% Similarity=0.053 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhC-----CCCch-----hhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchH
Q 031969 8 NRDKLQQFVSITGASEKAALQALKAS-----DWHLE-----GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVD 77 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~-----~w~le-----~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~d 77 (150)
.++.++++...|+.++..-..+.+.. +..+. .++...+. .......+..+|..|-......|+.+
T Consensus 9 ~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~g~i~~~ 83 (190)
T 1g8i_A 9 KPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFP-----FGDPTKFATFVFNVFDENKDGRIEFS 83 (190)
T ss_dssp CHHHHHHHHHTSSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCT-----TSCTHHHHHHHHHHHCTTCSSEEEHH
T ss_pred CHHHHHHHHHccCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCC-----CCChHHHHHHHHHHHhcCCCCeEeHH
Confidence 45678888888998877655544432 22221 11222111 11245678899999865444689999
Q ss_pred HHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 78 G~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
-...++..++..+..-.+-.+-..+-...-|.|+.+||...+..+
T Consensus 84 ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~ 128 (190)
T 1g8i_A 84 EFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI 128 (190)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence 999999888766544333334445566677999999999998873
No 202
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=90.43 E-value=3.5 Score=29.12 Aligned_cols=70 Identities=13% Similarity=0.049 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCC-CcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~p-ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 124 (150)
+...+.++|..|-.. ....|+.+-+..++..+|..+ ....+--+-..+-...-|.|+.+||+..+..++.
T Consensus 23 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~ 94 (190)
T 2l2e_A 23 DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSR 94 (190)
T ss_dssp CSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcC
Confidence 456788888888643 245899999999999887653 2223333444556666789999999998887654
No 203
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=90.42 E-value=0.31 Score=34.45 Aligned_cols=40 Identities=33% Similarity=0.517 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
..+.|.+++++ |.++..|++.|..++||++.|++-.++..
T Consensus 78 ~e~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~e~L~~~~ 117 (126)
T 2lbc_A 78 PEEIVAIITSM-GFQRNQAIQALRATNNNLERALDWIFSHP 117 (126)
T ss_dssp CHHHHHHHHHH-TSCHHHHHHHHHHHTSCHHHHHHHHHTCC
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 46789999995 99999999999999999999999988764
No 204
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=90.40 E-value=0.54 Score=34.24 Aligned_cols=66 Identities=6% Similarity=0.092 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhcCCCC-CccchHHHHHHHh-hcCCC-C------CcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL-DMILVDGITLLCN-DLQVD-P------QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~e-dLgv~-p------ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|..+|..| |.++ ..|+.+-+...+. .+|.+ | .+-.+--+-..+....-|.|+.+||+..|...
T Consensus 97 ~~~l~~~F~~~-D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 171 (179)
T 3a8r_A 97 DNRLRTFFDMV-DKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQS 171 (179)
T ss_dssp HHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC--
T ss_pred HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 45677777777 3333 4788888887777 77765 3 22222222233344455778888888777653
No 205
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=90.30 E-value=1.4 Score=31.29 Aligned_cols=65 Identities=6% Similarity=-0.000 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+..+|..|-......|+.+-+.+++..+|++++.+. .+-..+-...=|.|+.+||+..+..+
T Consensus 108 ~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~--~~~~~~D~d~dG~i~~~Ef~~~~~~~ 172 (191)
T 2ccm_A 108 TKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCD--AAFDTLSDGGKTMVTREIFARLWTEY 172 (191)
T ss_dssp HHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHH--HHHHHHTTTTTSCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence 356778888885434469999999999999996655443 23334455567999999999988764
No 206
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=90.26 E-value=3.6 Score=29.13 Aligned_cols=62 Identities=21% Similarity=0.215 Sum_probs=34.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhccccc--------ccccHHHHHHHhH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATM--------CEFSKQEFIGGLQ 120 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~--------g~~tr~eF~~g~~ 120 (150)
..+..+|..|-......|+.+-+.+++...+++++++..++- .+....= |.|+.+||+.-|.
T Consensus 108 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~--~~d~~~d~~~~~~~~G~i~~~eF~~~l~ 177 (180)
T 3mse_B 108 TFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFL--SVHSIKKGIPREHIINKISFQEFKDYML 177 (180)
T ss_dssp CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHH--HHHTC---------CCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHH--HhhhccCcccccccCCeeeHHHHHHHHH
Confidence 567777777733223577777777777755555444433322 2222211 7777777776654
No 207
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=90.18 E-value=0.3 Score=30.48 Aligned_cols=40 Identities=10% Similarity=0.166 Sum_probs=34.6
Q ss_pred HHHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 9 RDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 9 ~~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
.+.+.++.++. +.+..+.+..|+++++|++.||+..++-.
T Consensus 10 ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI~~LL~m~ 50 (59)
T 1wgl_A 10 EEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMG 50 (59)
T ss_dssp HHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHSS
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcCc
Confidence 56778887776 67899999999999999999999998754
No 208
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=89.58 E-value=1.9 Score=29.12 Aligned_cols=67 Identities=16% Similarity=0.116 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhcC-CCCC-ccchHHHHHHHh-hcCCC---C--CcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKD-PYLD-MILVDGITLLCN-DLQVD---P--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~e-dLgv~---p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|..+|..|-. .... .|+.+-+..++. .||.. | ....+--+-..+....-|.|+-+||+..|..+
T Consensus 11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 85 (113)
T 1xk4_C 11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARL 85 (113)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 3567889999974 3345 899999999998 88852 2 33333344445556667999999999988764
No 209
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=89.55 E-value=1.5 Score=31.87 Aligned_cols=62 Identities=10% Similarity=0.134 Sum_probs=48.0
Q ss_pred HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
+..+|..|-......|+.+-+.+++..+|++++.+..+ ...+....=|.|+.+||+..|...
T Consensus 130 ~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~--~~~~D~d~dG~I~~~EF~~~~~~~ 191 (208)
T 2hpk_A 130 SNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTF--FEKADTDKSGKLERTELVHLFRKF 191 (208)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHH--HHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHH--HHHhCCCCCCcCcHHHHHHHHHHH
Confidence 78899988543446999999999999999776655443 334455567999999999998874
No 210
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=89.50 E-value=0.75 Score=32.02 Aligned_cols=67 Identities=7% Similarity=0.093 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcC----CCCCcHH-HH--------HHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ----VDPQDIV-ML--------VVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg----v~ped~~-~L--------vLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+|.++|+.|-......|+.+-+...+..+| ++|.+.. +. .|...+. .-|.|+.+||+..+..+
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~ 82 (174)
T 1q80_A 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEM 82 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHH
Confidence 46788999999432336999999999999998 9987655 21 1222233 56899999999998876
Q ss_pred CC
Q 031969 123 GI 124 (150)
Q Consensus 123 ~~ 124 (150)
..
T Consensus 83 ~~ 84 (174)
T 1q80_A 83 VK 84 (174)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 211
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=89.44 E-value=0.77 Score=31.22 Aligned_cols=64 Identities=5% Similarity=0.006 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|+.|-. .+..|+.+-+...+..+|++.+.+.-+ -..+....-|.|+.+||+..|..+
T Consensus 14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i--~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRV--WELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHH--HHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHH--HHHHcCCCCCcCcHHHHHHHHHHH
Confidence 4667778888855 557999999999999999765543332 223445567999999999988764
No 212
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=89.34 E-value=0.56 Score=28.89 Aligned_cols=39 Identities=8% Similarity=0.156 Sum_probs=33.2
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
..++++.++==+++..-+..|++++||++.||+.-...+
T Consensus 11 ~~L~~L~eMGF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~ 49 (54)
T 2cp8_A 11 ALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLS 49 (54)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHTTTTTCHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 367888887667899999999999999999999887554
No 213
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=89.33 E-value=2.2 Score=30.48 Aligned_cols=78 Identities=9% Similarity=0.075 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc-------CCCCCcHHHHHHHHhhcc-cccccccHHHHHHHhHHcC--CC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-------QVDPQDIVMLVVSWHMKA-ATMCEFSKQEFIGGLQSLG--ID 125 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-------gv~ped~~~LvLa~~l~a-~~~g~~tr~eF~~g~~~l~--~d 125 (150)
...+..+|..|-......|+.+-+.+++..+ |....+-.+-.+-..+.. ..-|.|+.+||+..+..++ ++
T Consensus 108 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~~~ 187 (204)
T 3e3r_A 108 EAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMN 187 (204)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCccCC
Confidence 4578889999844344699999999999854 444433333444445555 6679999999999999876 34
Q ss_pred CHHHHHHH
Q 031969 126 SLDKFRER 133 (150)
Q Consensus 126 si~~lk~~ 133 (150)
+-+.....
T Consensus 188 ~d~~f~~~ 195 (204)
T 3e3r_A 188 TDEEFVAM 195 (204)
T ss_dssp SHHHHHHH
T ss_pred ChHHHHHH
Confidence 44444433
No 214
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=89.32 E-value=0.42 Score=34.00 Aligned_cols=67 Identities=7% Similarity=0.019 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc-----------CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-----------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-----------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
....+.++|..|-...+..|+.+-+...+..+ |..+....+-.+-..+....-|.|+.+||+..+..
T Consensus 38 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~ 115 (191)
T 3khe_A 38 ETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD 115 (191)
T ss_dssp TTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 45788999999843334689999999988877 65555555555555666666788999999887744
No 215
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=89.30 E-value=1.2 Score=33.26 Aligned_cols=64 Identities=13% Similarity=0.022 Sum_probs=49.0
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-......|+.+-+.+++..+ |+.++++.. +-..+....-|.|+.+||+.-|...
T Consensus 133 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~--~~~~~D~d~dG~Is~~EF~~~~~~~ 199 (226)
T 2lvv_A 133 FELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATT--VFNEIDTNGSGVVTFDEFSCWAVTK 199 (226)
T ss_dssp HHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHH--HHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHH--HHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 368888998844334699999999999888 999987433 3334455667999999999988764
No 216
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=89.26 E-value=0.55 Score=28.71 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhh
Q 031969 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDV 43 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~ 43 (150)
.+.|.+.++ .|.+...|++.|...+||++.|.+-
T Consensus 12 ~~~Ia~Lm~-mGFsr~~ai~AL~~a~nnve~Aani 45 (52)
T 2ooa_A 12 DAKIAKLMG-EGYAFEEVKRALEIAQNNVEVARSI 45 (52)
T ss_dssp HHHHHHHHH-TTCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHH
Confidence 367888888 4999999999999999999999764
No 217
>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1
Probab=89.25 E-value=0.46 Score=36.59 Aligned_cols=39 Identities=21% Similarity=0.351 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~ 46 (150)
..++|+++++.||+.=-.+...|..++||++.|++---.
T Consensus 3 ~a~~VKeLRe~TGagmmdCKkAL~e~~GD~ekAie~LR~ 41 (196)
T 1aip_C 3 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRE 41 (196)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 367899999999999999999999999999999987653
No 218
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=89.23 E-value=0.64 Score=28.54 Aligned_cols=38 Identities=18% Similarity=0.210 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
...|++.+++ |.+...|++.|...+||++.|.+--.+.
T Consensus 10 e~~I~~L~~l-GF~r~~ai~AL~~a~nnve~Aa~iL~ef 47 (53)
T 2d9s_A 10 SSEIERLMSQ-GYSYQDIQKALVIAHNNIEMAKNILREF 47 (53)
T ss_dssp HHHHHHHHHH-TCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhcCCHHHHHHHHHHh
Confidence 4568888884 9999999999999999999998876544
No 219
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=89.09 E-value=2.5 Score=30.49 Aligned_cols=69 Identities=10% Similarity=0.003 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
.....+..+|..|-......|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus 56 ~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~ 124 (204)
T 1jba_A 56 EATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI 124 (204)
T ss_dssp TTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 457788999999865444699999999999999877655444444455666778999999999998876
No 220
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=89.07 E-value=0.49 Score=32.82 Aligned_cols=64 Identities=17% Similarity=0.264 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+..+|..|-......|+.+-+.+++..+|++++.+..++ ..+....-|.|+.+||+..+..
T Consensus 98 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~--~~~d~~~dg~i~~~eF~~~~~~ 161 (166)
T 2aao_A 98 EDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELM--RDVDQDNDGRIDYNEFVAMMQK 161 (166)
T ss_dssp THHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCHH--HHHCTTCSSSBCHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHH--HHhCCCCCCcEeHHHHHHHHHh
Confidence 356777777774333357888888888888887765544332 2334455688888888877655
No 221
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=89.07 E-value=2.6 Score=31.21 Aligned_cols=68 Identities=10% Similarity=0.109 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCCCcHHHHH----HHHhhcccccccccHHHHHHHhHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLV----VSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL----gv~ped~~~Lv----La~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.....+..+|..|-......|+.+-+..++..+ |..+.+..+-- +...+....-|.|+.++|+..|..
T Consensus 100 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~ 175 (263)
T 2f33_A 100 KSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV 175 (263)
T ss_dssp SCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCT
T ss_pred cHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence 356788899988854334699999999999988 88876544322 444555566799999999988753
No 222
>2zc2_A DNAD-like replication protein; GI 24377835, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Streptococcus mutans UA159}
Probab=88.94 E-value=0.87 Score=29.17 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=48.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhc--ccccccccHHHHHHHhHHcCCCCHHHHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMK--AATMCEFSKQEFIGGLQSLGIDSLDKFR 131 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~--a~~~g~~tr~eF~~g~~~l~~dsi~~lk 131 (150)
+.|-..|+++-......+..+-+..++++.|++|+ ++..++-+-+. .+++.. -+.-+..|++-|+.|+++.+
T Consensus 4 ~~l~~~~e~~~gr~ls~~e~~~i~~w~~~~~~~~e-lI~~A~~~a~~~~~~s~~Y--i~~Il~~W~~~gi~T~e~a~ 77 (78)
T 2zc2_A 4 NALVEDFERELGRMLSPFELEDLQKTVSDDKTDPD-LVRSALREAVFNGKTNWNY--IQAILRNWRHEGISTLRQVE 77 (78)
T ss_dssp CHHHHHHHHHHTSCCCHHHHHHHHHHHTTTCCCHH-HHHHHHHHHHHHTCCCHHH--HHHHHHHHHHTTCCSHHHHC
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHcCCCCHHH--HHHHHHHHHHcCCCCHHHHh
Confidence 34556666665532346778889999999998876 55555555442 222222 56788999999999998753
No 223
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=88.91 E-value=3.4 Score=28.70 Aligned_cols=75 Identities=8% Similarity=0.026 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHcCCC-CHHHHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFR 131 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~d-si~~lk 131 (150)
.+...+..+|..+-...+..|+.+....++..+ ..+.-+. .+-...-|.|+++||...+..+|.. +.+.++
T Consensus 39 ~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~ 111 (167)
T 1gjy_A 39 FNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVN 111 (167)
T ss_dssp CCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHH
T ss_pred cCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHH
Confidence 345566666666543223466666666666543 1222222 2233445777777777777776653 334444
Q ss_pred HHHH
Q 031969 132 ERIS 135 (150)
Q Consensus 132 ~~l~ 135 (150)
..+.
T Consensus 112 ~~~~ 115 (167)
T 1gjy_A 112 SIAK 115 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
No 224
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=88.75 E-value=0.38 Score=34.03 Aligned_cols=89 Identities=21% Similarity=0.246 Sum_probs=58.6
Q ss_pred CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC-CCCcCCHHHHHHHHHHhcCCCC-CccchHHHH
Q 031969 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-SKSLTDTRHLEELYNRYKDPYL-DMILVDGIT 80 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~-~~~~~~~~~l~~lFd~Y~d~~~-d~I~~dG~~ 80 (150)
-|++.+++.|.++++ .|-++..|++-|.+++.|.+.|++-.+.... ..+..++..++..++.+..... ....++.+
T Consensus 3 ~l~~~e~~~v~~l~~-MGFp~~~~~kAl~~~g~~~e~amewL~~h~~L~d~~~d~~~~e~~l~~~~~~~~~~~~~~~~v- 80 (118)
T 4ae4_A 3 HMSPSERQCVETVVN-MGYSYECVLRAMKAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLM- 80 (118)
T ss_dssp CSCHHHHHHHHHHHH-TTCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHCcCHHHHHHHHHHhchhcccCCChhhhHHHHHhccCCccccccCHHHH-
Confidence 589999999999987 5999999999999998899999998886421 0012244556666666543211 12223222
Q ss_pred HHHhhcCCCCCcH
Q 031969 81 LLCNDLQVDPQDI 93 (150)
Q Consensus 81 ~~~edLgv~ped~ 93 (150)
.-+.++|++...+
T Consensus 81 ~~L~eMGF~~~~a 93 (118)
T 4ae4_A 81 SKFKEMGFELKDI 93 (118)
T ss_dssp HHHHHTTCCHHHH
T ss_pred HHHHHcCCCHHHH
Confidence 2334677776544
No 225
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=88.70 E-value=2 Score=28.10 Aligned_cols=65 Identities=8% Similarity=-0.017 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCCCCCcH-----------HHHHHHHhhcccccccccHHHHHHHhH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDI-----------VMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-----Lgv~ped~-----------~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
..+..+|..|=-.....|+.+-+..++.. +|..+.+. .+--+...+....=|.||.+||+..+.
T Consensus 20 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 99 (103)
T 1snl_A 20 FNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 99 (103)
T ss_dssp CCHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence 34778888883323359999999999986 68776542 122233344555669999999999876
Q ss_pred H
Q 031969 121 S 121 (150)
Q Consensus 121 ~ 121 (150)
.
T Consensus 100 ~ 100 (103)
T 1snl_A 100 R 100 (103)
T ss_dssp C
T ss_pred c
Confidence 4
No 226
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=88.67 E-value=0.21 Score=36.91 Aligned_cols=85 Identities=11% Similarity=0.070 Sum_probs=51.1
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCC---CHHHHHHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID---SLDKFRER 133 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d---si~~lk~~ 133 (150)
..+..+|..+-......|+.+-...++..++..+..-.+-.+-..+-...-|.|+++||...+..++-. .-..-...
T Consensus 57 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~ 136 (211)
T 2ggz_A 57 KHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEF 136 (211)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHH
T ss_pred HHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHH
Confidence 447778887754334578888888888877766543333333334455566888888888888776421 11122334
Q ss_pred HHHHHHHc
Q 031969 134 ISFMRAEL 141 (150)
Q Consensus 134 l~~l~~~l 141 (150)
+..+-..+
T Consensus 137 ~~~~f~~~ 144 (211)
T 2ggz_A 137 INLVFHKI 144 (211)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555554
No 227
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=88.55 E-value=0.95 Score=27.22 Aligned_cols=40 Identities=13% Similarity=0.197 Sum_probs=33.7
Q ss_pred hHHHHHHHHHH-hCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 8 NRDKLQQFVSI-TGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 8 ~~~~i~~F~~i-T~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
..+.++..+++ =.++..+++..|+++++|++.|++...+.
T Consensus 4 ~e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~ 44 (49)
T 1otr_A 4 HESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKE 44 (49)
T ss_dssp HHHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 35667778887 47789999999999999999999987754
No 228
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=88.42 E-value=1.5 Score=32.74 Aligned_cols=70 Identities=11% Similarity=0.131 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCC-CCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
.+...+.++|+.|... .+..|+.+-+..++..+|.. +....+--+-..+....-|.|+.+||+..+..++
T Consensus 48 ~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~ 119 (224)
T 1s1e_A 48 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL 119 (224)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHc
Confidence 4577888888887642 23589999999999999865 4444444455566667779999999999998764
No 229
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=88.26 E-value=0.53 Score=31.33 Aligned_cols=63 Identities=13% Similarity=0.134 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCC--CC--CcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQV--DP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-----Lgv--~p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...|.+.|..|-+.+ +.|+.+-+..++.. ||. .+ +.+.- +-..+....-|.|+-+||+..+..
T Consensus 9 ~~~l~~~F~~fD~~~-g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~--l~~~~D~d~dG~I~f~EF~~~~~~ 80 (100)
T 1psr_A 9 IIGMIDMFHKYTRRD-DKIDKPSLLTMMKENFPNFLSACDKKGTNYLAD--VFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHTCCTT-SCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGT--HHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-CeECHHHHHHHHHHHhHhhhccccccCHHHHHH--HHHHhCCCCCCcCcHHHHHHHHHH
Confidence 357888999995433 49999999999976 554 33 33333 333455566799999999998865
No 230
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=88.13 E-value=0.2 Score=41.96 Aligned_cols=45 Identities=18% Similarity=0.276 Sum_probs=40.8
Q ss_pred CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
.+++..++.|.+.+++ |-++..|++.|..++||.+.|++-.|+++
T Consensus 320 ~~t~ee~eaI~rL~~m-GF~~~~a~~al~a~~~n~e~A~~~L~~~~ 364 (368)
T 1oqy_A 320 QVTPQEKEAIERLKAL-GFPESLVIQAYFACEKNENLAANFLLSQN 364 (368)
T ss_dssp CCCTTTHHHHHHHHHH-TCCSHHHHHHTSSSSSCSSHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHhhCc
Confidence 5788899999999987 99999999999999999999999888653
No 231
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=88.12 E-value=0.9 Score=29.12 Aligned_cols=41 Identities=22% Similarity=0.154 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ 49 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~ 49 (150)
...|.+.+++=-.++...++.|+.++.|++.||+--|+.+.
T Consensus 20 ~~ql~qL~~MGF~d~~an~~AL~at~Gnve~Ave~L~~~~~ 60 (67)
T 2dna_A 20 SKEMECLQAMGFVNYNANLQALIATDGDTNAAIYKLKSSQG 60 (67)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 34677777754456667799999999999999999998754
No 232
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=88.11 E-value=1.2 Score=32.02 Aligned_cols=65 Identities=9% Similarity=0.003 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+.++|+.|- +.+..|+.+-+..++..+|++.+.+.-+ -..+....-|.|+.+||+..|...
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~I--~~~~D~d~dG~Ld~~EF~~am~li 113 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGKI--WKLADVDKDGLLDDEEFALANHLI 113 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHHH--HHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHHH--HHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4688999999997 4456999999999999999765543322 223445567999999999988764
No 233
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=88.10 E-value=1.9 Score=32.09 Aligned_cols=66 Identities=9% Similarity=0.048 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcC-------CCCCcHHHHH--HHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-------VDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg-------v~ped~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
..++..+|..|=......|+.+-+.+++..+| ++++++..++ +-..+....=|.|+.+||+..+..
T Consensus 128 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 202 (214)
T 2l4h_A 128 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 202 (214)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 45888999988543446999999999999885 3445554332 334445556699999999998875
No 234
>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1
Probab=87.81 E-value=0.58 Score=30.78 Aligned_cols=40 Identities=33% Similarity=0.330 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHhCCC-HHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 8 NRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~-~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
++-.+.|.++|||.. ...-...|+..+.||..||.-.-+.
T Consensus 24 ~q~lLnQLrEITGiqD~~~L~~ALkas~Gdl~~AV~~LT~~ 64 (80)
T 1vdl_A 24 QQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAK 64 (80)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHhccCCHHHHHHHHhcc
Confidence 345789999999997 5567889999999999999766544
No 235
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=87.75 E-value=0.85 Score=33.04 Aligned_cols=65 Identities=9% Similarity=-0.112 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCC-----CCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD-----PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~-----ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.++|.+ |..+-......|+.+-+.+.+..||++ +..-.+--+...+....-|.|+.+||+..|..
T Consensus 32 ~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~ 101 (198)
T 1juo_A 32 QDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV 101 (198)
T ss_dssp CCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred cHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHH
Confidence 355666 776643233588888888888888873 34444444444555555677777777766654
No 236
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=87.69 E-value=1.2 Score=29.14 Aligned_cols=61 Identities=13% Similarity=0.047 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHh
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~ 119 (150)
.+..+..+|..|-......|+.+-+.+++..+|..+ +-.+-..+....-|.|+.+||++-+
T Consensus 73 ~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~----~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH----HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHH----HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 456689999998543446999999999999888654 2333334445566999999998754
No 237
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=87.65 E-value=2.2 Score=31.88 Aligned_cols=66 Identities=15% Similarity=0.089 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc------------CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL------------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL------------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+..+|..|--.....|+.+-+.+++..+ |....+-.+-.+-..+....=|.||.+||+..++.
T Consensus 137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 214 (229)
T 3dd4_A 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214 (229)
T ss_dssp HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 4678889988854334699999999999887 33433333444445566667799999999999885
No 238
>1xb2_B EF-TS, elongation factor TS, mitochondrial, EF-TSMT; protein-protein complex, translation; HET: MSE; 2.20A {Bos taurus} SCOP: a.5.2.2 d.43.1.1 d.43.1.1
Probab=87.64 E-value=0.59 Score=38.00 Aligned_cols=39 Identities=21% Similarity=0.125 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969 8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~ 46 (150)
..++|+++++.||+.=-.+++.|..++||++.|++---.
T Consensus 4 ta~~VKeLRe~TGagmmdCKKAL~e~~GD~ekAie~LR~ 42 (291)
T 1xb2_B 4 SKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHK 42 (291)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 357899999999999999999999999999999998765
No 239
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=87.57 E-value=2.3 Score=28.82 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhcCCCC--CccchHHHHHHHhh-cCCC---CCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYL--DMILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~ed-Lgv~---ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...|.+.|..|-+.++ ..|+.+-+..++.. ||.. ++.+.-+ -..+....-|.|+-+||+..+...
T Consensus 21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~l--i~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEK--MKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHH--HHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHH--HHHHCCCCCCCCcHHHHHHHHHHH
Confidence 3578889999962223 49999999999975 7733 2334333 334555667999999999988764
No 240
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=87.36 E-value=5.4 Score=29.41 Aligned_cols=65 Identities=5% Similarity=-0.010 Sum_probs=36.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~ 121 (150)
..+.++|..+-......|+.+....++..++........+.-++ .+-...-|.|+++||...+..
T Consensus 85 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~ 150 (226)
T 2zfd_A 85 LFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVA 150 (226)
T ss_dssp HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Confidence 34555666664333346777777777776654433333333333 233445577777777776664
No 241
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=87.36 E-value=5.1 Score=28.78 Aligned_cols=130 Identities=7% Similarity=-0.037 Sum_probs=71.1
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHh---------CCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHH
Q 031969 10 DKLQQFVSITGASEKAALQALKA---------SDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGIT 80 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~---------~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~ 80 (150)
+.++.+...|+.++.....+.+. .+..|. .+.|...-..........+.++|..|-......|+.+-..
T Consensus 20 ~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~--~~e~~~~l~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~ 97 (207)
T 2ehb_A 20 EDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIH--KEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFV 97 (207)
T ss_dssp -CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEE--HHHHHHHHHSCTTCCCHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccC--HHHHHHHHhccccccHHHHHHHHHHhcCCCCCeEeHHHHH
Confidence 34666777788887665443332 112221 1111110000122333456778888854344689999999
Q ss_pred HHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHcC---CC--CHHHHHHHHHHHHHHc
Q 031969 81 LLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLG---ID--SLDKFRERISFMRAEL 141 (150)
Q Consensus 81 ~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~---~d--si~~lk~~l~~l~~~l 141 (150)
.++..++........+..++ .+-...-|.|+++||...+..+- -. +.+.++..+..+-..+
T Consensus 98 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~ 164 (207)
T 2ehb_A 98 RSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQA 164 (207)
T ss_dssp HHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHh
Confidence 99988876543333343333 34455669999999998887541 11 2334444444444555
No 242
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=87.24 E-value=2.9 Score=29.51 Aligned_cols=47 Identities=13% Similarity=0.193 Sum_probs=30.2
Q ss_pred CccchHHHHHHHhhcCCCCCcHHHHHHHHhhccccccc-ccHHHHHHHhHHc
Q 031969 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-FSKQEFIGGLQSL 122 (150)
Q Consensus 72 d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~-~tr~eF~~g~~~l 122 (150)
..|+.+-+.. +..+|++|..-.++ ..+....-|. |+.+||+..|..+
T Consensus 43 G~i~~~el~~-l~~~g~~~~~~~l~---~~~D~d~~G~~I~~~EF~~~~~~~ 90 (183)
T 1dgu_A 43 AQVPFEQILS-LPELKANPFKERIC---RVFSTSPAKDSLSFEDFLDLLSVF 90 (183)
T ss_dssp TCSCHHHHHT-STTSSSCTTHHHHH---HHHSCSSSSCCCCHHHHHHHHHHH
T ss_pred CcCcHHHHHH-HHhhhcCcHHHHHH---HHhCCCCCCCEecHHHHHHHHHHh
Confidence 4777777777 77777777543322 2244445577 7777777777654
No 243
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=87.22 E-value=1.8 Score=30.61 Aligned_cols=71 Identities=10% Similarity=0.073 Sum_probs=50.2
Q ss_pred CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCC-CCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 031969 54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI 124 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 124 (150)
.+...+..+|+.|... ....|+.+-+..++..++- ......+-.+-..+....-|.|+.+||+..+..++.
T Consensus 22 ~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~ 94 (190)
T 1g8i_A 22 FTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSR 94 (190)
T ss_dssp SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcC
Confidence 3577888888888643 2459999999999998821 122233333444555667799999999999987643
No 244
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=87.18 E-value=3.6 Score=28.97 Aligned_cols=72 Identities=8% Similarity=-0.018 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCC-CcHHHHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969 54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID 125 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~p-ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d 125 (150)
.+...+.++|+.|... ....|+.+-+..++..++... ....+-.+-..+....-|.|+.+||+..+..++..
T Consensus 22 ~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~ 95 (190)
T 1fpw_A 22 FDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRG 95 (190)
T ss_dssp STHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccC
Confidence 4677888888887532 245999999999999996532 22333334445555667999999999999987653
No 245
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=87.18 E-value=6.1 Score=28.75 Aligned_cols=71 Identities=10% Similarity=0.006 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHhcCC-CCCccchHHHHHHHhhcCCCCCcHH-HHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 031969 55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGID 125 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~edLgv~ped~~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d 125 (150)
+.+.+.++|+.|-.. ....|+.+-+..++..+|++|.... +--+-..+....-|.|+.+||+..|..++..
T Consensus 17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~ 89 (211)
T 2ggz_A 17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQE 89 (211)
T ss_dssp -------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccC
Confidence 456677777777533 2358888888888888888875433 3334445556667889999998888876543
No 246
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=86.86 E-value=2 Score=30.22 Aligned_cols=55 Identities=11% Similarity=0.105 Sum_probs=41.6
Q ss_pred CCCC-CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 68 DPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 68 d~~~-d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
|.++ ..|+.+-+.+++..+|....+-.+-.+-..+-...=|.|+.+||+..+..+
T Consensus 112 D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~~ 167 (186)
T 2hps_A 112 DTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDF 167 (186)
T ss_dssp CTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 6555 589999999999999965554444444455555667999999999998775
No 247
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=86.85 E-value=1.9 Score=32.31 Aligned_cols=67 Identities=9% Similarity=-0.019 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+..+|+.|-...+..|+.+-....+..++-.+..-..-.+-..+-...-|.|+++||...+..+
T Consensus 101 ~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~ 167 (229)
T 3dd4_A 101 TTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAI 167 (229)
T ss_dssp HHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH
Confidence 3445566666643233577777777777666543322222222223334455778888888777765
No 248
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=86.74 E-value=0.15 Score=33.43 Aligned_cols=65 Identities=11% Similarity=0.058 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc---CCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
...+..+|..|-......|+.+-+.+++..+ |..+.+-.+-.+-..+....-|.|+.+||+..|+
T Consensus 40 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 40 SSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 4567888888843333689999999999988 6665444433344445556679999999998765
No 249
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=86.58 E-value=3.4 Score=27.48 Aligned_cols=79 Identities=13% Similarity=0.005 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhcCCC---CCccchHHHHHHHhhcC-CCCCc-H---HHHHHHHhhcccccccccHHHHHHHhHHcCCCCH
Q 031969 56 TRHLEELYNRYKDPY---LDMILVDGITLLCNDLQ-VDPQD-I---VMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL 127 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~---~d~I~~dG~~~~~edLg-v~ped-~---~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi 127 (150)
...|.+.|..|-..+ ...|+.+-+..++..++ -.+.+ + .+=-+-..+-...=|.|+-+||+..|..+...--
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~~~~ 89 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPIA 89 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHGGGH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 367888999996433 36999999999998754 33322 1 1222223334455699999999999988755544
Q ss_pred HHHHHHH
Q 031969 128 DKFRERI 134 (150)
Q Consensus 128 ~~lk~~l 134 (150)
..++...
T Consensus 90 ~~~~~~~ 96 (100)
T 3nxa_A 90 KLIHEQE 96 (100)
T ss_dssp HHHHHHH
T ss_pred HHHhccc
Confidence 4444443
No 250
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=85.88 E-value=3.1 Score=29.48 Aligned_cols=65 Identities=11% Similarity=0.120 Sum_probs=37.5
Q ss_pred HHHHHHHHHhc--CCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYK--DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~--d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..|.+.|+.|= +.....|+.+-+...+..||++|..-.+--+... ....-|.|+-++|+.-|...
T Consensus 9 ~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~-d~~~~g~i~f~eFl~~~~~~ 75 (159)
T 3i5g_C 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGT-KKMGEKAYKLEEILPIYEEM 75 (159)
T ss_dssp HHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCC-SSTTSCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcc-cccCCCcccHHHHHHHHHHh
Confidence 34555666662 1123478888888888888888865443222111 11123667777777666543
No 251
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=85.66 E-value=1 Score=35.41 Aligned_cols=42 Identities=17% Similarity=0.329 Sum_probs=36.6
Q ss_pred CCCcchHHHHHHHHHHhC-------CCHHHHHHHHHhCCCCchhhhhhh
Q 031969 3 KLSRSNRDKLQQFVSITG-------ASEKAALQALKASDWHLEGAFDVF 44 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~-------~~~~~A~~~L~~~~w~le~Ai~~f 44 (150)
.|+..|++.|++|++... .++..-.+||.+++||++.|...+
T Consensus 25 ~l~~~q~~~l~~lr~~l~~~~~~~~~dd~~LlRFLrarkfdv~~A~~~l 73 (296)
T 1aua_A 25 NLDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMF 73 (296)
T ss_dssp TCCTTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHcCCCHHHHHHHH
Confidence 578899999999988763 568899999999999999998776
No 252
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=85.57 E-value=1.6 Score=34.99 Aligned_cols=49 Identities=8% Similarity=-0.065 Sum_probs=21.5
Q ss_pred ccchHHHHHHH-hhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 73 MILVDGITLLC-NDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 73 ~I~~dG~~~~~-edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.|+.+-+..++ ..+|..+.+-.+-.+...+....-|.|+.++|+..|..
T Consensus 269 ~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~ 318 (323)
T 1ij5_A 269 QLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (323)
T ss_dssp SEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 45555555555 55553322222222222333334455555555555443
No 253
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=85.41 E-value=2.4 Score=37.92 Aligned_cols=66 Identities=6% Similarity=-0.064 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc--------CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL--------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
.+.|.++|++|- ..+..|+.+-+...+..+ |..+..-.+-.|...+....-|.|+.+||+..|..+
T Consensus 531 ~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~ 604 (714)
T 3bow_A 531 GDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI 604 (714)
T ss_dssp CHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 467899999997 344699999999999997 777766565556666777777888888888887663
No 254
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=85.13 E-value=1.1 Score=36.35 Aligned_cols=43 Identities=23% Similarity=0.442 Sum_probs=37.7
Q ss_pred CCCcchHHHHHHHHHHhC-------CCHHHHHHHHHhCCCCchhhhhhhh
Q 031969 3 KLSRSNRDKLQQFVSITG-------ASEKAALQALKASDWHLEGAFDVFY 45 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~-------~~~~~A~~~L~~~~w~le~Ai~~f~ 45 (150)
.|++.|++.|++|++... .++..-.+||.+.+||++.|...+-
T Consensus 34 ~lt~~q~~~l~~lR~~l~~~~~~~~~dD~~LLRFLRArkfdv~kA~~mL~ 83 (320)
T 3q8g_A 34 NLTKEQEEALLQFRSILLEKNYKERLDDSTLLRFLRARKFDINASVEMFV 83 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 588999999999998862 5678899999999999999998773
No 255
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=84.55 E-value=1.5 Score=32.44 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=46.2
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcC---CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQ---VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLg---v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|=......|+.+-+.+++..+| ++++++..+ ...+....=|.|+.+||+..|...
T Consensus 130 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l--~~~~D~d~dG~I~~~EF~~~~~~~ 196 (219)
T 3cs1_A 130 FELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAAL--FKELDKNGTGSVTFDEFAAWASAV 196 (219)
T ss_dssp HHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHH--HHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHH--HHHhCCCCCCcEeHHHHHHHHHHh
Confidence 4578888888433336999999999999886 455654433 334455566999999999988763
No 256
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=84.49 E-value=3.9 Score=28.29 Aligned_cols=78 Identities=6% Similarity=-0.005 Sum_probs=49.7
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHcCCC-CHHHH
Q 031969 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKF 130 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~d-si~~l 130 (150)
..+...+.++|..+-...+..|+.+....++..+ ..+.-+. .+-...-|.|+++||...+..+|.. +.+.+
T Consensus 36 ~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~ 108 (165)
T 1k94_A 36 PFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL-------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTL 108 (165)
T ss_dssp CCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHH
Confidence 3456778888887754334578888877777653 2222222 3334456889999998888888764 55555
Q ss_pred HHHHHHH
Q 031969 131 RERISFM 137 (150)
Q Consensus 131 k~~l~~l 137 (150)
+..+..+
T Consensus 109 ~~~~~~~ 115 (165)
T 1k94_A 109 TTIVKRY 115 (165)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555554
No 257
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=84.38 E-value=3.9 Score=29.45 Aligned_cols=66 Identities=15% Similarity=0.203 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
...+..+|..|-......|+.+-+.+++..+|++++.+..+ -..+....-|.|+.+||+..|....
T Consensus 81 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~--~~~~D~d~dG~Is~~EF~~~~~~~~ 146 (188)
T 1s6i_A 81 EENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDM--IKEIDQDNDGQIDYGEFAAMMRKRK 146 (188)
T ss_dssp CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHH--HHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHH--HHHHCCCCCCcEeHHHHHHHHHHcC
Confidence 45688889988433346899999999999999877654433 3445556669999999999887644
No 258
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=84.24 E-value=5 Score=28.78 Aligned_cols=68 Identities=6% Similarity=-0.008 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHh----hcCCCCCcHHHHHHH----HhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCN----DLQVDPQDIVMLVVS----WHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e----dLgv~ped~~~LvLa----~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+..+|..|-......|+.+-+.+++. .+|....+-.+-.+. ..+....-|.|+.+||+..+...
T Consensus 109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 184 (207)
T 2ehb_A 109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLN 184 (207)
T ss_dssp HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 356789999888543346999999999985 567665443332222 24555667999999999988763
No 259
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=83.96 E-value=0.87 Score=28.71 Aligned_cols=39 Identities=23% Similarity=0.248 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCCC-CchhhhhhhhccC
Q 031969 9 RDKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFYSQP 48 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w-~le~Ai~~f~~~~ 48 (150)
.+.|.+.++ .|-++..|++.|..+++ +++.|++-.|+..
T Consensus 10 e~~v~~L~~-MGF~~~~a~~AL~~t~n~~~e~A~~wL~~h~ 49 (64)
T 2crn_A 10 PSLLEPLLA-MGFPVHTALKALAATGRKTAEEALAWLHDHC 49 (64)
T ss_dssp CSSHHHHHH-TSCCHHHHHHHHHHHTSCCHHHHHHHHHHHS
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 346888888 69999999999999865 9999999888654
No 260
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=83.87 E-value=7 Score=32.36 Aligned_cols=82 Identities=13% Similarity=0.136 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHH----HHHHhhcCCCCC----------cHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGI----TLLCNDLQVDPQ----------DIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~----~~~~edLgv~pe----------d~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.+.+.++|+.|-...+..|+.+-+ .+++..+|++|. .-.+-.+-..+....-|.|+.+||+..+..
T Consensus 330 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~ 409 (486)
T 3mwu_A 330 TKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAID 409 (486)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSC
T ss_pred HHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHh
Confidence 467888999885433468998888 556667799887 334444555566677899999999988765
Q ss_pred cC-CCCHHHHHHHHHHH
Q 031969 122 LG-IDSLDKFRERISFM 137 (150)
Q Consensus 122 l~-~dsi~~lk~~l~~l 137 (150)
.. ..+.+.++.....+
T Consensus 410 ~~~~~~~~~~~~~F~~~ 426 (486)
T 3mwu_A 410 RTILLSRERMERAFKMF 426 (486)
T ss_dssp TTTTCCHHHHHHHHHHH
T ss_pred hhccchHHHHHHHHHHh
Confidence 42 33455555555444
No 261
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=83.78 E-value=3.1 Score=35.60 Aligned_cols=65 Identities=9% Similarity=0.073 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
...+..+|..|-......|+.+-+.+++..+|....+-.+-.|...+....-|.|+.+||+.-|.
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 45678888888433345888888999998888887666666666666666778899999987664
No 262
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=83.77 E-value=5.5 Score=29.41 Aligned_cols=67 Identities=9% Similarity=0.053 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHh----hcCCCCCcHHHHHHH----HhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCN----DLQVDPQDIVMLVVS----WHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e----dLgv~ped~~~LvLa----~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+..+|..|-......|+.+-+.+++. .+|..+.+-.+-.+. ..+....=|.|+.+||+..+...
T Consensus 121 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~ 195 (226)
T 2zfd_A 121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH 195 (226)
T ss_dssp HHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 56788999988543446999999999995 677766543332222 24555667999999999998764
No 263
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=83.62 E-value=0.55 Score=36.05 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=30.9
Q ss_pred CCCcchHHHHHHHHHHhC----------CCHHHHHHHHHhCCCCchhhhhhh
Q 031969 3 KLSRSNRDKLQQFVSITG----------ASEKAALQALKASDWHLEGAFDVF 44 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~----------~~~~~A~~~L~~~~w~le~Ai~~f 44 (150)
.||+.+++.|.+|++... .++....+||.+++||++.|...+
T Consensus 3 ~ls~~~~~~l~~lr~~l~~~~~~~~~~~~dd~~LlRFLra~k~dv~~A~~~l 54 (262)
T 1r5l_A 3 HMSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLL 54 (262)
T ss_dssp ------CTTHHHHHHHHHHHTCCCSSSCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHhCCcccCCCCCCHHHHHHHHHhCCCCHHHHHHHH
Confidence 578888888888887753 468899999999999999998865
No 264
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=83.09 E-value=9.6 Score=26.83 Aligned_cols=120 Identities=8% Similarity=0.048 Sum_probs=76.1
Q ss_pred CCCCcchHHHHH-HHHHH-h-----C-CCHHHHHHHHHhCCCCc-hhhhhhhhccCC---C-----------------CC
Q 031969 2 HKLSRSNRDKLQ-QFVSI-T-----G-ASEKAALQALKASDWHL-EGAFDVFYSQPQ---S-----------------KS 52 (150)
Q Consensus 2 ~~l~~~~~~~i~-~F~~i-T-----~-~~~~~A~~~L~~~~w~l-e~Ai~~f~~~~~---~-----------------~~ 52 (150)
++||..|.+.++ -|..+ + | .+...-...|++-+.++ +.-|..+..... + ..
T Consensus 1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~d~~~~g~i~f~eFl~~~~~~~~~~~ 80 (159)
T 3i5g_C 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCCSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcccccCCCcccHHHHHHHHHHhhcccc
Confidence 367777766664 35443 1 2 24555667788888776 333444432211 1 11
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcc--cccccccHHHHHHHhHH
Q 031969 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKA--ATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a--~~~g~~tr~eF~~g~~~ 121 (150)
......|.+.|..|=......|+.+-+.+.+..+|....+-.+=.|...+.. ..=|.|+-++|++-|..
T Consensus 81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~ 151 (159)
T 3i5g_C 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence 2345678888988844334699999999999999988765544444444443 33589999999998765
No 265
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=82.66 E-value=2.2 Score=29.77 Aligned_cols=64 Identities=8% Similarity=0.040 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHhcCCCC-CccchHHHHHHHhhcC----------CCCCcHHHHH--HHHhhcccccccccHHHHHHHh
Q 031969 55 DTRHLEELYNRYKDPYL-DMILVDGITLLCNDLQ----------VDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~edLg----------v~ped~~~Lv--La~~l~a~~~g~~tr~eF~~g~ 119 (150)
....+..+|..| |.++ ..|+.+-+.+.+..++ ++++.+..++ +-..+....=|.|+.+||+..|
T Consensus 66 ~~~~l~~~F~~~-D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 66 PQELQLHYFKMH-DYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHHHT-CTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHHHHh-CCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 356788999999 4444 6999999999998884 3334343332 1133445566999999998754
No 266
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=82.06 E-value=4.3 Score=30.14 Aligned_cols=68 Identities=7% Similarity=0.056 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCCCcHHHH----HHHHhhcccccccccHHHHHHHhHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVML----VVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL----gv~ped~~~L----vLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.....+..+|..|-......|+.+-+..++..+ |..+.+-.+- .+-..+....-|.|+.+||+..|..
T Consensus 101 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 176 (272)
T 2be4_A 101 DNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILAL 176 (272)
T ss_dssp CCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCC
T ss_pred ccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhh
Confidence 456789999999954334699999999999988 8776544332 1444555666799999999998754
No 267
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=81.93 E-value=1.7 Score=30.76 Aligned_cols=66 Identities=9% Similarity=0.005 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCC-----CC--CcHHHHH--HHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-----DP--QDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv-----~p--ed~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+..+|..|-......|+.+-+.+++..+|. .+ +.+..++ +...+....=|.|+.+||+..+..
T Consensus 97 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 171 (183)
T 1dgu_A 97 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 171 (183)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHCS
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 357888898885433468999999999998876 22 2232221 334445556699999999987765
No 268
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=81.84 E-value=7.5 Score=27.90 Aligned_cols=30 Identities=3% Similarity=0.004 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhh
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCND 85 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed 85 (150)
...+..+|..|-......|+.+-+.+++..
T Consensus 121 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~ 150 (191)
T 3k21_A 121 KKLIYCAFRVFDVDNDGEITTAELAHILYN 150 (191)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 344555555552222235555555555554
No 269
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=81.56 E-value=3.2 Score=28.97 Aligned_cols=66 Identities=8% Similarity=0.149 Sum_probs=52.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhh-----cCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
..|..+|.+|... ...|+.+-+.+++.. ||-.+.+-.+=-+-..+-.-.=|.|+=+||+.-|..+-
T Consensus 15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~ 85 (121)
T 4drw_A 15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 85 (121)
T ss_dssp HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 4567788888653 469999999999976 88877766666667777777789999999999887753
No 270
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.46 E-value=1.6 Score=27.84 Aligned_cols=41 Identities=10% Similarity=0.145 Sum_probs=35.2
Q ss_pred chHHHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 7 SNRDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 7 ~~~~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
..++.+.++.++. +.+..+-...|+++++|++.||+...+-
T Consensus 17 ~~~~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aId~LL~m 58 (67)
T 2dhy_A 17 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQM 58 (67)
T ss_dssp CSHHHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 3467788898887 6689999999999999999999998854
No 271
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=81.10 E-value=4.3 Score=29.19 Aligned_cols=118 Identities=13% Similarity=0.146 Sum_probs=72.2
Q ss_pred CCCcchHHHHH-HHHHH----hCC-CHHHHHHHHHhCCCCc-hhhhhhhhccC----CC---------------CCcCCH
Q 031969 3 KLSRSNRDKLQ-QFVSI----TGA-SEKAALQALKASDWHL-EGAFDVFYSQP----QS---------------KSLTDT 56 (150)
Q Consensus 3 ~l~~~~~~~i~-~F~~i----T~~-~~~~A~~~L~~~~w~l-e~Ai~~f~~~~----~~---------------~~~~~~ 56 (150)
.||..|.+.++ -|..+ .|. +...-..+|...+.++ +.-+...+... .+ ......
T Consensus 4 ~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~ 83 (176)
T 2lhi_A 4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE 83 (176)
T ss_dssp CCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcH
Confidence 46665544443 34443 222 4555666777777665 23333433221 11 011124
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
..|.+.|..|=......|+.+-+.+.+..+|..+.+-.+=-+-..+. ..=|.|+-+||+.-|+.
T Consensus 84 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp HHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 67888999883323369999999999999999876654433333443 44599999999998865
No 272
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=80.85 E-value=3.7 Score=33.93 Aligned_cols=67 Identities=10% Similarity=-0.015 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHH----HHHHhhcCCCCC-------cHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGI----TLLCNDLQVDPQ-------DIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~----~~~~edLgv~pe-------d~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|+.|-...+..|+.+-+ .+++..+|.+|. +..+--+-..+....-|.|+.+||+..+...
T Consensus 334 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~ 411 (484)
T 3nyv_A 334 TKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDR 411 (484)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhc
Confidence 356788888885433468999888 666677798887 3444444455556667999999999887664
No 273
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=80.64 E-value=6.8 Score=29.58 Aligned_cols=67 Identities=12% Similarity=0.006 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhc----CCCC--------CcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDP--------QDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL----gv~p--------ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
....+..+|..|-......|+.+-+..++..+ |..+ ..-.+-.+-..+....-|.|+.+||+..+..
T Consensus 163 ~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 241 (256)
T 2jul_A 163 VHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241 (256)
T ss_dssp HHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 46788899998854344699999999999887 6432 1122333334445556699999999999887
No 274
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=80.19 E-value=4.8 Score=34.50 Aligned_cols=65 Identities=9% Similarity=0.073 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
...|.+.|..|=......|+.+-+.+++..+|....+-.+--|-..+-...=|.|+.+||++-|.
T Consensus 374 eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 374 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 45677778877332335888888888888888777655554444555555568888888887653
No 275
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=80.17 E-value=4.5 Score=33.75 Aligned_cols=67 Identities=9% Similarity=0.007 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc--------CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL--------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
...+.++|+.|-...+..|+.+-+...+..+ |+.+.+..+-.+-..+....-|.|+.+||+..+...
T Consensus 354 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 428 (504)
T 3q5i_A 354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDK 428 (504)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH
T ss_pred HHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhh
Confidence 4678889999854344699999999999888 667766666666667777778999999999887653
No 276
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=80.04 E-value=2.5 Score=38.04 Aligned_cols=79 Identities=10% Similarity=0.103 Sum_probs=55.2
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC--CCCHHHHHHHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRERI 134 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~--~dsi~~lk~~l 134 (150)
..+..+|..|-...+..|+.+-+...+..+|..+.+..+-.+...+....-|.|+.+||+..|.... .++.+.++...
T Consensus 725 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~aF 804 (863)
T 1sjj_A 725 NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASF 804 (863)
T ss_dssp HHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4566677766332335899999999999999988776665565666666779999999999887753 33445555444
Q ss_pred H
Q 031969 135 S 135 (150)
Q Consensus 135 ~ 135 (150)
.
T Consensus 805 ~ 805 (863)
T 1sjj_A 805 K 805 (863)
T ss_dssp H
T ss_pred H
Confidence 3
No 277
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=79.52 E-value=11 Score=26.31 Aligned_cols=38 Identities=16% Similarity=0.178 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV 94 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~ 94 (150)
..|.+.|+.|=......|+.+-+...+..||..|.+..
T Consensus 16 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~ 53 (153)
T 3i5g_B 16 QELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDE 53 (153)
T ss_dssp HHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHH
Confidence 55667788874333468999999999999999987654
No 278
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=78.97 E-value=6.1 Score=31.36 Aligned_cols=67 Identities=16% Similarity=0.069 Sum_probs=44.3
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhh-------cCCC----CCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCND-------LQVD----PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-------Lgv~----ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.-..+|.=+|.-|-|. +..|+-+.+..++.+ +|-. .+.+...|=..+-++..-|.||.+||++|++.
T Consensus 165 ~leeKL~w~F~lyDD~-~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d~dg~It~~EFl~~~~~ 242 (261)
T 1eg3_A 165 HLEDKYRYLFKQVASS-TGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRL 242 (261)
T ss_dssp CHHHHHHHHHHHHSCT-TSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTTTCSCBCHHHHHHHHHT
T ss_pred CHHHHHHHHHheeeCC-CCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCCCCCcCCHHHHHHHHHh
Confidence 3367899999999953 358999988888865 3321 12233333322222235699999999999876
No 279
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=78.04 E-value=2.3 Score=31.41 Aligned_cols=65 Identities=12% Similarity=0.074 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhh-cCCCCCc--HHHHHHHH------hhc-ccccccccHHHHHHHhH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQD--IVMLVVSW------HMK-AATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-Lgv~ped--~~~LvLa~------~l~-a~~~g~~tr~eF~~g~~ 120 (150)
...+.++|+.|-......|+.+-+...+.. ||++|.. +..++-.. .+. ...-|.|+.+||+..+.
T Consensus 47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~ 121 (219)
T 3cs1_A 47 KQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRL 121 (219)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHH
Confidence 466778888885433468999999988877 8987743 33332111 111 14457888888887653
No 280
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=76.97 E-value=11 Score=27.05 Aligned_cols=70 Identities=7% Similarity=0.025 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHhc---CCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhH-HcCCC
Q 031969 55 DTRHLEELYNRYK---DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQ-SLGID 125 (150)
Q Consensus 55 ~~~~l~~lFd~Y~---d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~-~l~~d 125 (150)
....+.++|+.+. +.+.+.|+.+....++..+.- .+...-|.-+. .+-...-|.|+++|+...+. .+|..
T Consensus 57 ~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~-~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ 131 (179)
T 3a8r_A 57 SDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTD-QGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASAN 131 (179)
T ss_dssp CHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHC-CCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcC-CCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccc
Confidence 3455566665543 434467999888888876642 22223333333 33455569999999999998 77765
No 281
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=76.74 E-value=1.9 Score=32.15 Aligned_cols=63 Identities=13% Similarity=0.040 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHH-HHhhcCCCCCcHHHHHHHHhh---------cccccccccHHHHHHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITL-LCNDLQVDPQDIVMLVVSWHM---------KAATMCEFSKQEFIGG 118 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~-~~edLgv~ped~~~LvLa~~l---------~a~~~g~~tr~eF~~g 118 (150)
...|.++|+.|-......|+.+-+.+ +..-+|+.|....+-.+...+ ....-|.|+.+||+..
T Consensus 50 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~ 122 (226)
T 2lvv_A 50 KSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEF 122 (226)
T ss_dssp HHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHH
Confidence 46677888888432335899999988 667788876432222222222 3445678888888874
No 282
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=76.21 E-value=1.5 Score=36.56 Aligned_cols=68 Identities=13% Similarity=0.102 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
....+..+|+.|-...+..|+.+-+.+++..+|..+.+-.+--+-..+....=|.|+.+||++.|..+
T Consensus 415 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 415 SRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp CHHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 45677888888733223578888888888888866544333333333344455888888888877664
No 283
>2lva_A Ubiquitin carboxyl-terminal hydrolase 28; UIM, ubiquitin interacting motif, UBA domain, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=77.74 E-value=0.55 Score=33.72 Aligned_cols=41 Identities=27% Similarity=0.274 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHhCCC-HHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 8 NRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~-~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
++-.+.|..+|||.. ...-...|++++.||..||.-+-+..
T Consensus 18 ~Q~lLNQLrEITGIqD~~~L~~ALkAsnGdl~qAV~~LT~~~ 59 (129)
T 2lva_A 18 GQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTDER 59 (129)
Confidence 344789999999998 55678899999999999998776553
No 284
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=75.87 E-value=5.3 Score=28.88 Aligned_cols=63 Identities=8% Similarity=0.068 Sum_probs=41.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
..|.++|+.|-......|+.+-+..+. .||++|..-. +...+....-|.|+.+||+..+....
T Consensus 29 ~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~~~---l~~~~d~~~~g~i~~~EF~~~~~~~~ 91 (208)
T 2ct9_A 29 TRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLGDR---IINAFFSEGEDQVNFRGFMRTLAHFR 91 (208)
T ss_dssp HHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTHHH---HHHTTSCTTCSCEEHHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcHHH---HHHHHcCCCCCcCcHHHHHHHHHhhc
Confidence 456667777743233578777777754 7888875432 23344555668999999999887653
No 285
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=75.71 E-value=5.6 Score=35.52 Aligned_cols=65 Identities=8% Similarity=0.025 Sum_probs=49.6
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-......|+.+-+.+.+..+|..+.+-.+-.+...+. ..-|.|+.+||+..+..+
T Consensus 605 ~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~ 669 (714)
T 3bow_A 605 QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL 669 (714)
T ss_dssp HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH
Confidence 56777888884333469999999999999998776555555555555 667999999999988763
No 286
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=74.51 E-value=2.3 Score=34.03 Aligned_cols=62 Identities=3% Similarity=-0.107 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHH-HHHhhcccccccccHHHHHHHhHH
Q 031969 58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLV-VSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~Lv-La~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.+..+|..|-......|+.+-+..++ +|..+.+..+-. +...+....-|.|+.++|+..|..
T Consensus 189 ~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~ 251 (323)
T 1ij5_A 189 ALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLC 251 (323)
T ss_dssp TSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHH
Confidence 34456766643333589999999988 888776655555 555666666788888888887665
No 287
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=73.97 E-value=4.2 Score=33.40 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=36.5
Q ss_pred CCCcchHHHHHHHHHHh--------CCCHHHHHHHHHhCCCCchhhhhhhh
Q 031969 3 KLSRSNRDKLQQFVSIT--------GASEKAALQALKASDWHLEGAFDVFY 45 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT--------~~~~~~A~~~L~~~~w~le~Ai~~f~ 45 (150)
.|+..|++.|++|++.. ..++..-.+||.+++||++.|...+-
T Consensus 7 ~l~~~q~~~l~~lr~~l~~~~~~l~~~dD~~LlRFLrarkfdv~~A~~~l~ 57 (403)
T 1olm_A 7 DLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLR 57 (403)
T ss_dssp BCCHHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhccCCCCCChhHHHHHHHhcCCCHHHHHHHHH
Confidence 68889999999998763 24678899999999999999988763
No 288
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=73.70 E-value=20 Score=25.40 Aligned_cols=66 Identities=11% Similarity=0.044 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHhcC---CCCCccchHHHHHHHhhcCCCC-CcH----HHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 55 DTRHLEELYNRYKD---PYLDMILVDGITLLCNDLQVDP-QDI----VMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d---~~~d~I~~dG~~~~~edLgv~p-ed~----~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+.|.++|..|.. .....|+.....++|.|.||=. -.+ +=|+.+- + +..--.|+=++|+..+..+
T Consensus 20 ~~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~K-v-~k~~r~I~f~qF~~aL~~l 93 (125)
T 1pul_A 20 DDADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSK-V-TGPKKKATFDETKKVLAFV 93 (125)
T ss_dssp CHHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHH-H-TCSSSCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehc-c-cCCcceecHHHHHHHHHHH
Confidence 46789999999984 2236899999999999999875 222 1234443 3 5555679999999998874
No 289
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=72.93 E-value=11 Score=27.52 Aligned_cols=69 Identities=25% Similarity=0.289 Sum_probs=50.2
Q ss_pred cCCHHHHHHHHHHhcCC-----CCCccchHHHHHHHhhcCCCC-CcH---H-HHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 53 LTDTRHLEELYNRYKDP-----YLDMILVDGITLLCNDLQVDP-QDI---V-MLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~-----~~d~I~~dG~~~~~edLgv~p-ed~---~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
+++...|.++|..|..- ....|+-.-..++|.|.+|=. -.+ . =|+.+ ++++..--.|+=++|+..+..+
T Consensus 11 ~~d~~~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~-KvK~k~~rkI~f~qF~~aL~~l 89 (151)
T 1wlm_A 11 STDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFS-KVKAKSARVINYEEFKKALEEL 89 (151)
T ss_dssp CCSCCSHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHH-HHSCSSCSEEEHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhhcceehh-eeccCccceecHHHHHHHHHHH
Confidence 45667899999999962 125799999999999999875 221 1 23333 4555555679999999998875
No 290
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=72.69 E-value=16 Score=23.27 Aligned_cols=79 Identities=9% Similarity=-0.006 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHh-hcccccccccHHHHHHHhHHc---CC-CCHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQSL---GI-DSLD 128 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~-l~a~~~g~~tr~eF~~g~~~l---~~-dsi~ 128 (150)
.+...+.++|..+- .+..|+.+....++ ...+.....+--++. +-...-|.|++++|...+..+ |. -+.+
T Consensus 7 ~t~~e~~~~~~~~d--~~g~i~~~ef~~~~---~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 81 (110)
T 1pva_A 7 LKADDIKKALDAVK--AEGSFNHKKFFALV---GLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDA 81 (110)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHH---TCTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHH
T ss_pred CCHHHHHHHHHhcC--CCCcCcHHHHHHHH---ccCcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHH
Confidence 45788999999985 33578888777776 345555555544443 345566999999999999998 44 3555
Q ss_pred HHHHHHHHH
Q 031969 129 KFRERISFM 137 (150)
Q Consensus 129 ~lk~~l~~l 137 (150)
.++..+..+
T Consensus 82 ~~~~~~~~~ 90 (110)
T 1pva_A 82 ETKAFLKAA 90 (110)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555555444
No 291
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=72.07 E-value=3.2 Score=30.11 Aligned_cols=70 Identities=10% Similarity=0.101 Sum_probs=51.0
Q ss_pred ccchHHHHHHHhhcCCCCCcHHH-------HHHHHhhccccc----ccccHHHHHHHhHHcCCCCHHHHHHHHHHHHHHc
Q 031969 73 MILVDGITLLCNDLQVDPQDIVM-------LVVSWHMKAATM----CEFSKQEFIGGLQSLGIDSLDKFRERISFMRAEL 141 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~-------LvLa~~l~a~~~----g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~l 141 (150)
+=.++++.+.|+.||++|+++.+ +..|...|.... |.-+.++....-...-++|+..+...|..+...+
T Consensus 165 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~~ 244 (247)
T 3dv9_A 165 KPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQSAL 244 (247)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHHHHh
Confidence 44568899999999999987653 667777786653 4445555554333455689999999999888766
Q ss_pred C
Q 031969 142 K 142 (150)
Q Consensus 142 ~ 142 (150)
.
T Consensus 245 ~ 245 (247)
T 3dv9_A 245 K 245 (247)
T ss_dssp C
T ss_pred c
Confidence 4
No 292
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=71.97 E-value=6.8 Score=32.68 Aligned_cols=66 Identities=11% Similarity=0.078 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
...+..+|+.|=...+..|+.+-+.+++...+++.+++.- +-..+....-|.|+.+||+.-|.+++
T Consensus 434 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~--~~~~~D~d~dG~I~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 434 EERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWND--VLGEADQNKDNMIDFDEFVSMMHKIC 499 (504)
T ss_dssp HHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCCCHHHHHH--HHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCCCHHHHHH--HHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence 4567777777632223577777777777666655443332 22333344457777777777776643
No 293
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=71.85 E-value=10 Score=34.45 Aligned_cols=65 Identities=8% Similarity=0.053 Sum_probs=50.3
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..+..+|..|-......|+.+-+.+.+..+|..+.+-.+-.+...+. ..-|.|+.++|+..+..+
T Consensus 607 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~ 671 (900)
T 1qxp_A 607 RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL 671 (900)
T ss_dssp HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH
Confidence 56777888875433469999999999999998876655555555565 667999999999988764
No 294
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=71.68 E-value=4.1 Score=33.95 Aligned_cols=80 Identities=10% Similarity=0.009 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCC--------CCcHHHHHHHHhhcccccccccHHHHHHHhHHcC-CCC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD--------PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-IDS 126 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~--------ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~-~ds 126 (150)
.+.+.++|+.|-...+..|+.+-+...+..+|.+ +....+--+-..+....-|.|+.+||+..+...+ -.+
T Consensus 345 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~ 424 (494)
T 3lij_A 345 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS 424 (494)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTC
T ss_pred HHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhcccc
Confidence 4678888888844334699999999999988754 3233444444455566679999999999876531 123
Q ss_pred HHHHHHHHH
Q 031969 127 LDKFRERIS 135 (150)
Q Consensus 127 i~~lk~~l~ 135 (150)
.+.++....
T Consensus 425 ~~~~~~~F~ 433 (494)
T 3lij_A 425 KDKLESAFQ 433 (494)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444433
No 295
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=71.63 E-value=16 Score=26.23 Aligned_cols=76 Identities=9% Similarity=-0.001 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHc----CCC-CH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL----GID-SL 127 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l----~~d-si 127 (150)
.+...+..+|..+-...+..|+.+-...++..+ .-+--|. .+- ..-|.|+++|+...+..+ |.. +-
T Consensus 43 ~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~-------~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~ 114 (174)
T 2i7a_A 43 FSLDECRSLVALMELKVNGRLDQEEFARLWKRL-------VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR 114 (174)
T ss_dssp CCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH-------HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCH
T ss_pred CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCH
Confidence 345566677766643333577777777776553 1222222 445 667899999999999888 764 45
Q ss_pred HHHHHHHHHH
Q 031969 128 DKFRERISFM 137 (150)
Q Consensus 128 ~~lk~~l~~l 137 (150)
+.++..+...
T Consensus 115 ~~~~~l~~~~ 124 (174)
T 2i7a_A 115 ELLHLVTLRY 124 (174)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555444
No 296
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=71.51 E-value=5.2 Score=28.06 Aligned_cols=37 Identities=14% Similarity=0.194 Sum_probs=31.1
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
+.|.+|++ .|-++..|+.-|..++.|++.|++-.|..
T Consensus 78 ~~v~~L~e-MGF~~~~a~~AL~~~~nd~erAlewL~~~ 114 (118)
T 4ae4_A 78 QLMSKFKE-MGFELKDIKEVLLLHNNDQDNALEDLMAR 114 (118)
T ss_dssp HHHHHHHH-TTCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 34667766 48899999999999999999999987754
No 297
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=70.57 E-value=3.7 Score=34.20 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=35.0
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
...+.|.+.+++ |-++..+++.|.+++||++.|++-.|+.
T Consensus 167 ~~~~~i~~l~~M-Gf~~~~~~~AL~a~~nn~~~A~e~L~~g 206 (368)
T 1oqy_A 167 EYETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG 206 (368)
T ss_dssp THHHHHHHHHTT-TCCSHHHHHHHHHSCSSTTHHHHTTTTS
T ss_pred chHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 356778888874 8999999999999999999999999865
No 298
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=70.53 E-value=17 Score=27.56 Aligned_cols=69 Identities=23% Similarity=0.283 Sum_probs=49.9
Q ss_pred cCCHHHHHHHHHHhcCC----C-CCccchHHHHHHHhhcCCCC-CcH---H-HHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 53 LTDTRHLEELYNRYKDP----Y-LDMILVDGITLLCNDLQVDP-QDI---V-MLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~----~-~d~I~~dG~~~~~edLgv~p-ed~---~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
+++...|.++|..|..- . ...|+-.-..++|.|.+|=. -.+ . =|+.+ ++++..--.|+=++|+..+..+
T Consensus 4 ~~~~~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~-KvK~k~~rkI~feqF~~aL~~l 82 (184)
T 2jrf_A 4 STDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFS-KVKGKSARVINYEEFKKALEEL 82 (184)
T ss_dssp SSSCSHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHH-HHCCSCCSEEEHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhh-eeccCcceeecHHHHHHHHHHH
Confidence 45677899999999962 1 25799999999999999874 211 1 23333 3555555679999999988774
No 299
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=70.20 E-value=7.9 Score=23.65 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=28.8
Q ss_pred chHHHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969 7 SNRDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYS 46 (150)
Q Consensus 7 ~~~~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~ 46 (150)
..++.++++.++. +.+.++=...|..++++++.|||+..+
T Consensus 11 e~~~~~~~L~~MFP~lD~evI~~Vl~a~~G~~~~~IdaLLq 51 (54)
T 1p3q_Q 11 ERKDTLNTLQNMFPDMDPSLIEDVCIAAASRIGPCVDALLS 51 (54)
T ss_dssp HHHHHHHHHHHHSTTSCHHHHHHHHHHSCC--CGGGC----
T ss_pred HHHHHHHHHHHHcccCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 3466788888877 557889999999999999999998764
No 300
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=69.22 E-value=13 Score=30.73 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 123 (150)
...+..+|..|-...+..|+.+-+.+++...+++.+++.- +-..+....=|.|+.+||+..|+.++
T Consensus 425 ~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~--~~~~~D~d~dG~I~~~EF~~~~~~~~ 490 (494)
T 3lij_A 425 KDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKE--MISGIDSNNDGDVDFEEFCKMIQKLC 490 (494)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHC-CCSCCCHHHHH--HHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHH--HHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence 3456666666632222466666666666543333332222 22223333446666666666666543
No 301
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=68.15 E-value=19 Score=29.52 Aligned_cols=66 Identities=6% Similarity=-0.057 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
...+.++|+.+-...+..|+.+-....+...+.....-.+-.+-..+-...-|.||++||...+..
T Consensus 381 ~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 446 (484)
T 3nyv_A 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV 446 (484)
T ss_dssp HHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 455555665553322245655555555544422111111111222233334466666666655554
No 302
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=68.12 E-value=20 Score=22.72 Aligned_cols=80 Identities=5% Similarity=-0.069 Sum_probs=53.5
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHc---CC-CCH
Q 031969 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL---GI-DSL 127 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l---~~-dsi 127 (150)
..+...+.++|..+- .+..|+.+....++. ..++....+.-+. .+-...-|.|++++|...+..+ |. -+-
T Consensus 6 ~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 80 (109)
T 1bu3_A 6 ILADADVAAALKACE--AADSFNYKAFFAKVG---LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTD 80 (109)
T ss_dssp SSCHHHHHHHHHHTC--STTCCCHHHHHHHHT---GGGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCH
T ss_pred cCCHHHHHHHHHHhC--CCCcCcHHHHHHHHH---cChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCH
Confidence 456789999999985 335798888777764 2334444444444 3345566999999999999998 44 355
Q ss_pred HHHHHHHHHH
Q 031969 128 DKFRERISFM 137 (150)
Q Consensus 128 ~~lk~~l~~l 137 (150)
+.++..+..+
T Consensus 81 ~~~~~~~~~~ 90 (109)
T 1bu3_A 81 AETKAFLKAG 90 (109)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5555554443
No 303
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=66.55 E-value=22 Score=22.51 Aligned_cols=79 Identities=5% Similarity=-0.040 Sum_probs=52.4
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHcC---C-CCH
Q 031969 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLG---I-DSL 127 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~---~-dsi 127 (150)
.++...+.++|..+- .+..|+.+....++. ..+.....+.-++ .+-...-|.|++++|...+..++ . -+-
T Consensus 5 ~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 79 (108)
T 1rro_A 5 ILSAEDIAAALQECQ--DPDTFEPQKFFQTSG---LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTE 79 (108)
T ss_dssp TSCHHHHHHHHHHTC--STTCCCHHHHHHHHS---GGGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCH
T ss_pred cCCHHHHHHHHHHcc--CCCCcCHHHHHHHHh---cCcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCH
Confidence 356789999999985 345898888887764 2333344444444 33445669999999999999983 3 345
Q ss_pred HHHHHHHHH
Q 031969 128 DKFRERISF 136 (150)
Q Consensus 128 ~~lk~~l~~ 136 (150)
+.++..+..
T Consensus 80 ~~~~~~~~~ 88 (108)
T 1rro_A 80 SETKSLMDA 88 (108)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555544443
No 304
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=65.96 E-value=22 Score=22.43 Aligned_cols=79 Identities=6% Similarity=0.019 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHh-hcccccccccHHHHHHHhHHc---CC-CCHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQSL---GI-DSLD 128 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~-l~a~~~g~~tr~eF~~g~~~l---~~-dsi~ 128 (150)
.++..+.++|..+- .+..|+.+-...++. ..+.....+.-+.. +-...-|.|++++|...+..+ |. -+.+
T Consensus 6 ~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 80 (109)
T 1rwy_A 6 LSAEDIKKAIGAFT--AADSFDHKKFFQMVG---LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAK 80 (109)
T ss_dssp SCHHHHHHHHHTTC--STTCCCHHHHHHHHT---GGGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHH
T ss_pred CCHHHHHHHHHHcC--CCCcEeHHHHHHHHh---cCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHH
Confidence 46788999999875 335788888777763 23344444444443 344566999999999999998 44 3445
Q ss_pred HHHHHHHHH
Q 031969 129 KFRERISFM 137 (150)
Q Consensus 129 ~lk~~l~~l 137 (150)
.++..+..+
T Consensus 81 ~~~~~~~~~ 89 (109)
T 1rwy_A 81 ETKTLMAAG 89 (109)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 554444433
No 305
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=64.64 E-value=9.3 Score=25.94 Aligned_cols=79 Identities=6% Similarity=-0.066 Sum_probs=33.1
Q ss_pred HHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHcCC--CCHHHHHHHHH
Q 031969 59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRERIS 135 (150)
Q Consensus 59 l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~--dsi~~lk~~l~ 135 (150)
+.++|..+-......|+.+-...++...--.......+.-++ .+-...-|.|++++|...+..+|. -+-+.++..+.
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~ 84 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 345666654323357877777766654322222223333333 334556799999999999999985 45555555444
Q ss_pred HH
Q 031969 136 FM 137 (150)
Q Consensus 136 ~l 137 (150)
.+
T Consensus 85 ~~ 86 (135)
T 3h4s_E 85 EG 86 (135)
T ss_dssp HH
T ss_pred Hh
Confidence 33
No 306
>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=64.58 E-value=12 Score=24.07 Aligned_cols=41 Identities=12% Similarity=0.124 Sum_probs=34.5
Q ss_pred HHHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhccCC
Q 031969 9 RDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQPQ 49 (150)
Q Consensus 9 ~~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~ 49 (150)
...|.+..++. ...+....++|+.++.|+|.+|++.+++.-
T Consensus 14 ~s~I~qV~DLfPdLG~gfi~~~L~~y~~nvE~vin~LLE~~L 55 (71)
T 2di0_A 14 DSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILEERL 55 (71)
T ss_dssp HHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcccCCHHHHHHHHHHhCCCHHHHHHHHHccCC
Confidence 45677777776 557889999999999999999999999853
No 307
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=63.91 E-value=16 Score=33.92 Aligned_cols=70 Identities=10% Similarity=0.037 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCC----------CcHHHHHHHHhhccc----ccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP----------QDIVMLVVSWHMKAA----TMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~p----------ed~~~LvLa~~l~a~----~~g~~tr~eF~~g~~~ 121 (150)
+..|..+|..|...+...|+.+.+.+|+.+.+-++ ..-.+.-|....... .-|.++.++|+.-|..
T Consensus 222 R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S 301 (885)
T 3ohm_B 222 RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG 301 (885)
T ss_dssp CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence 57899999999543456899999999999996442 111223333333332 3588999999999987
Q ss_pred cCCC
Q 031969 122 LGID 125 (150)
Q Consensus 122 l~~d 125 (150)
-.++
T Consensus 302 ~~~~ 305 (885)
T 3ohm_B 302 EENG 305 (885)
T ss_dssp TTSC
T ss_pred cccC
Confidence 6554
No 308
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=63.10 E-value=2.9 Score=36.99 Aligned_cols=79 Identities=11% Similarity=0.024 Sum_probs=31.8
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC-C--CCHHHHH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-I--DSLDKFR 131 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~-~--dsi~~lk 131 (150)
....+.++|..+-......|+.+....++..+.-. +++.-+.-. +- ..-|.||.+||.+-+...+ - -|.+..+
T Consensus 45 s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~~-~el~~aF~~--fD-~~~G~Is~~EL~~fL~~~qge~~ls~ee~~ 120 (624)
T 1djx_A 45 DDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQR-AEIDRAFEE--AA-GSAETLSVERLVTFLQHQQREEEAGPALAL 120 (624)
T ss_dssp -----------------------CTTHHHHHHTCC-HHHHHHHHH--HH-TTSSSEEHHHHHHHHHHTSCCSSCSHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhccH-HHHHHHHHH--hc-CCCCeecHHHHHHHHHHHhCCCCCCHHHHH
Confidence 34567777776533223578888888888776432 333222111 11 2358899999988888753 2 2455555
Q ss_pred HHHHHH
Q 031969 132 ERISFM 137 (150)
Q Consensus 132 ~~l~~l 137 (150)
+-|.+.
T Consensus 121 ~ii~~~ 126 (624)
T 1djx_A 121 SLIERY 126 (624)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555544
No 309
>3k6g_A Telomeric repeat-binding factor 2-interacting Pro; helix, chromosomal protein, nucleus, phosphoprotein, telomer cycle, DNA-binding, protein binding; 1.95A {Homo sapiens}
Probab=63.06 E-value=35 Score=23.61 Aligned_cols=59 Identities=19% Similarity=0.201 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHhCCC-HHHHHHHHHhCCCCchhhhhhhhccCCC---CC-----------cCCHHHHHHHHHHhcC
Q 031969 8 NRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQPQS---KS-----------LTDTRHLEELYNRYKD 68 (150)
Q Consensus 8 ~~~~i~~F~~iT~~~-~~~A~~~L~~~~w~le~Ai~~f~~~~~~---~~-----------~~~~~~l~~lFd~Y~d 68 (150)
..+.|+++|+-|+.+ ..+.+.+|+.++ +++.|. .|..++.+ .+ +.++...++|-++|-.
T Consensus 13 ~~~~i~~lMeef~~DL~sVTqAlLK~SG-el~at~-~fL~~~~r~dg~PiWsr~DD~~Lqk~D~~~R~qL~~KfG~ 86 (111)
T 3k6g_A 13 AIKIIRQLMEKFNLDLSTVTQAFLKNSG-ELEATS-AFLASGQRADGYPIWSRQDDIDLQKDDEDTREALVKKFGA 86 (111)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHTTT-CHHHHH-HHHHHSSCTTSCCCCCHHHHHHHTCCCHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHccc-cHHHHH-HHHhCCCcCCCCcceeeccHHHHhcCCHHHHHHHHHHHhh
Confidence 356789999999999 456666676666 896554 45555532 12 3456667777777743
No 310
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=62.04 E-value=11 Score=27.12 Aligned_cols=63 Identities=11% Similarity=0.042 Sum_probs=42.7
Q ss_pred ccchHHHHHHHhhcCCCCCcHHH-------HHHHHhhccccccc----ccHHHHHHHhHHcCCCCHHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIVM-------LVVSWHMKAATMCE----FSKQEFIGGLQSLGIDSLDKFRERIS 135 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~-------LvLa~~l~a~~~g~----~tr~eF~~g~~~l~~dsi~~lk~~l~ 135 (150)
+=.++++.+.|+.||++|+++.+ +..|...|.+..+. -.+++....-...-++++.++...|.
T Consensus 160 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~ 233 (237)
T 4ex6_A 160 KPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVL 233 (237)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHH
Confidence 34568999999999999987653 66777788765443 44455444223344678888877664
No 311
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=60.68 E-value=29 Score=21.90 Aligned_cols=79 Identities=5% Similarity=-0.104 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHc---CC-CCHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL---GI-DSLD 128 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l---~~-dsi~ 128 (150)
++...+.++|..+- .+..|+.+-...++.- .+.....+.-+. .+-...-|.|++++|...+..+ |. -+.+
T Consensus 6 ~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 80 (108)
T 2pvb_A 6 LKDADVAAALAACS--AADSFKHKEFFAKVGL---ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA 80 (108)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhC---ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHH
Confidence 56788999999875 2357988888777642 233344444444 3344566999999999999998 44 3555
Q ss_pred HHHHHHHHH
Q 031969 129 KFRERISFM 137 (150)
Q Consensus 129 ~lk~~l~~l 137 (150)
.++..+..+
T Consensus 81 ~~~~~~~~~ 89 (108)
T 2pvb_A 81 ETKAFLADG 89 (108)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555554443
No 312
>2ou3_A Tellurite resistance protein of COG3793; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE I3A; 1.85A {Nostoc punctiforme} SCOP: a.287.1.1
Probab=60.20 E-value=43 Score=23.78 Aligned_cols=90 Identities=14% Similarity=0.049 Sum_probs=55.0
Q ss_pred CCCcchHHHHHHHHHHhCCCHHHHHHHHH-hCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHH-hcCCCCCccchHHHH
Q 031969 3 KLSRSNRDKLQQFVSITGASEKAALQALK-ASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNR-YKDPYLDMILVDGIT 80 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~-~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~-Y~d~~~d~I~~dG~~ 80 (150)
..+..+.+.|.+++.-.|.++.......+ ....++ ..+...-.......+.-+.-+|.- |+|..-+.-...=+.
T Consensus 45 ~v~~~E~~~i~~~~~~~~l~~~~~~~l~~~~~~~~l----~~~~~~i~~~~~~~~~~l~~l~~vA~ADG~~~~~E~~~L~ 120 (161)
T 2ou3_A 45 VISPEEKDWALGFCASWGVADWVIEDLKTYEADEAL----EEVIARSPQVSMAQRDILLSAIWVSAADGELHEKEKAKIR 120 (161)
T ss_dssp CCCHHHHHHHHHHHHHTTCCHHHHHHHHHCCCCSCH----HHHHTTCTTGGGCHHHHHHHHHHHHHTTSSCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHHHHHhhccCCCCH----HHHHHHHHHHhccHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 45678888999999888899887666665 223333 223222111011112244555553 566433556667789
Q ss_pred HHHhhcCCCCCcHHHH
Q 031969 81 LLCNDLQVDPQDIVML 96 (150)
Q Consensus 81 ~~~edLgv~ped~~~L 96 (150)
++++-||+++.++..+
T Consensus 121 ~iA~~Lgls~~~~~~l 136 (161)
T 2ou3_A 121 KMATILGIKEEIVDQL 136 (161)
T ss_dssp HHHHHHTCCHHHHHHH
T ss_pred HHHHHcCCCHHHHHHH
Confidence 9999999999887655
No 313
>4gvq_A Methenyltetrahydromethanopterin cyclohydrolase; HET: N4M; 1.30A {Archaeoglobus fulgidus} PDB: 4gvr_A 4gvs_A*
Probab=60.07 E-value=0.41 Score=39.41 Aligned_cols=64 Identities=16% Similarity=0.440 Sum_probs=39.1
Q ss_pred HhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHH--hcCCC--------CCccchHHHH-HHHhhcCCCCCcHHHH
Q 031969 31 KASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNR--YKDPY--------LDMILVDGIT-LLCNDLQVDPQDIVML 96 (150)
Q Consensus 31 ~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~--Y~d~~--------~d~I~~dG~~-~~~edLgv~ped~~~L 96 (150)
+..+|.| ..+.||.-.++...+-..+-+.+|++ |+|.. .+.+=++-++ +..++.||+|+++..|
T Consensus 93 QyAGW~l--~~~~f~amGSGPaRALa~k~e~lf~~l~Y~D~~~~avl~lEs~~lP~~~v~~~iA~~cgv~p~~l~ll 167 (316)
T 4gvq_A 93 QKAGWQI--KVDKYFAMGSGPARALALKPKKTYERIEYEDDADVAVIALEANQLPDEKVMEFIAKECDVDPENVYAL 167 (316)
T ss_dssp TSCCEEE--EETTEEEEEESTTHHHHTSSHHHHHHHTCCCCCSCEEEEEECSSCCCHHHHHHHHHHHTSCGGGEEEE
T ss_pred cccCccc--ccCCEeeecCcHHHHhhcCcHhHHHHcCceeccccEEEEEEcCCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 4589998 45789877665322211122567776 55642 2344445554 5559999999998643
No 314
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=59.23 E-value=2.1 Score=29.37 Aligned_cols=49 Identities=10% Similarity=-0.023 Sum_probs=25.2
Q ss_pred CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 72 d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
..|+.+-+.+.+..+|. + +-.+--+-..+....-|.|+.++|+.-|..+
T Consensus 61 G~I~~~El~~~l~~lG~-t-~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~ 109 (123)
T 2kld_A 61 GKLNFDELRQDLKGKGH-T-DAEIEAIFTKYDQDGDQELTEHEHQQMRDDL 109 (123)
T ss_dssp TCEEHHHHHHHTTTCCS-S-HHHHHHHHHHHSSSSCCEECSHHHHHCSCTT
T ss_pred CCCCHHHHHHHHHHhCC-C-HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 45666666666666666 2 1122222223334445666666666655444
No 315
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=57.77 E-value=7.6 Score=29.09 Aligned_cols=28 Identities=25% Similarity=0.340 Sum_probs=20.8
Q ss_pred CCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 20 GASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 20 ~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
|.++..+++.|.+++||.+.|.+..|++
T Consensus 141 GF~r~~viqA~~ac~knee~Aan~L~~~ 168 (171)
T 2qsf_X 141 GFERDLVIQVYFACDKNEEAAANILFSD 168 (171)
T ss_dssp TCCHHHHHHHHHHTTTCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 5567777777788888888887777754
No 316
>1qlm_A Methenyltetrahydromethanopterin cyclohydrolase; methanogenesis, biological methanogenesis; 2.0A {Methanopyrus kandleri} SCOP: d.147.1.1
Probab=57.71 E-value=0.48 Score=38.91 Aligned_cols=67 Identities=13% Similarity=0.351 Sum_probs=40.1
Q ss_pred HHHHH--hCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHH--hcCCC--------CCccchHH-HHHHHhhcCCCCCcH
Q 031969 27 LQALK--ASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNR--YKDPY--------LDMILVDG-ITLLCNDLQVDPQDI 93 (150)
Q Consensus 27 ~~~L~--~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~--Y~d~~--------~d~I~~dG-~~~~~edLgv~ped~ 93 (150)
..+|- .++|.|. ...||.-.|+.+.+-..+-+.||++ |+|.. .+.+-++- +.+..++.||+|+++
T Consensus 87 iACLgSQyAGW~l~--~g~ffamGSGPaRala~kpe~ly~~l~Y~D~~~~avl~lEs~~lP~~~v~e~iA~~cgV~p~~v 164 (316)
T 1qlm_A 87 VSTLAAQKAGWQVQ--VGDYFAMGSGPARALALKPKETYEEIDYEDDADVAILCLESSELPDEDVAEHVADECGVDPENL 164 (316)
T ss_dssp HHHTTTTSCCEEEE--ETTEEEEEESTTHHHHTSSHHHHHHHTCCCCCSCEEEEEECSSCCCHHHHHHHHHHHTSCGGGE
T ss_pred HHhhhhhhccceec--cCceeeccChHHHHHhcCchhhHHhcCccccCCceEEEEecCCCCCHHHHHHHHHHcCCCHHHE
Confidence 34443 3899995 4789987766432211122466766 56642 23444444 445558999999997
Q ss_pred HH
Q 031969 94 VM 95 (150)
Q Consensus 94 ~~ 95 (150)
..
T Consensus 165 ~~ 166 (316)
T 1qlm_A 165 YL 166 (316)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 317
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=57.19 E-value=19 Score=24.74 Aligned_cols=48 Identities=6% Similarity=-0.009 Sum_probs=25.1
Q ss_pred CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHc
Q 031969 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL 122 (150)
Q Consensus 72 d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 122 (150)
-...++-+.+-++.+||+|+|-++==++.++-.-+ ++-++|++-|-+.
T Consensus 24 ~~Vsae~L~eEfdefGi~~~d~VldKc~ELC~~y~---lda~e~VeeWmAF 71 (101)
T 2keb_A 24 MSASAQQLAEELQIFGLDCEEALIEKLVELCVQYG---QNEEGMVGELIAF 71 (101)
T ss_dssp CCCCHHHHHHHHHHHTCBCCHHHHHHHHHHHHHHT---CCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHcCCCCCHHHHHHHHHHHHHcC---CCHHHHHHHHHHH
Confidence 35666677777777777777744322222222111 2445555555554
No 318
>2juj_A E3 ubiquitin-protein ligase CBL; alpha helix, UBA domain, calcium, cytoplasm, metal- binding, phosphorylation, proto-oncogene, SH2 domain; NMR {Homo sapiens}
Probab=57.15 E-value=18 Score=22.15 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=32.6
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
.-...|.++++ .|-+...|++-|...+.|++.|.|-..+=
T Consensus 6 p~e~~Ia~L~s-mGfsr~da~~AL~ia~Ndv~~AtNiLlEf 45 (56)
T 2juj_A 6 QLSSEIENLMS-QGYSYQDIQKALVIAQNNIEMAKNILREF 45 (56)
T ss_dssp HHHHHHHHHHT-TTCCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred CChHHHHHHHH-cCCCHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 34567888877 48999999999999999999998865543
No 319
>1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B*
Probab=57.10 E-value=55 Score=25.31 Aligned_cols=39 Identities=8% Similarity=0.150 Sum_probs=29.9
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHhCCCC---chhhhhhhh
Q 031969 7 SNRDKLQQFVSITGASEKAALQALKASDWH---LEGAFDVFY 45 (150)
Q Consensus 7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~---le~Ai~~f~ 45 (150)
.++..+.+.+...+.+++.++.||..+++= -...|..|+
T Consensus 22 ~~K~~~~~~~~~FN~~PkkGI~~L~~~g~l~~~~~~~iA~fL 63 (230)
T 1ku1_A 22 DRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFL 63 (230)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHCCCcCCCCHHHHHHHH
Confidence 455667788888899999999999998872 245677775
No 320
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=57.03 E-value=7.6 Score=27.54 Aligned_cols=64 Identities=16% Similarity=0.083 Sum_probs=39.3
Q ss_pred ccchHHHHHHHhhcCCCCCcHH-------HHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIV-------MLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~-------~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~ 136 (150)
+-.++++.+.++.+|++|+++. =+..|...|....+.-+-.+-+......-++|+..|...|+.
T Consensus 127 kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 127 KPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence 3456799999999999997654 356677777655432221111112234456788887776653
No 321
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=56.28 E-value=52 Score=23.89 Aligned_cols=128 Identities=11% Similarity=0.078 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCC---------------CCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCc
Q 031969 9 RDKLQQFVSITGASEKAALQALKASD---------------WHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDM 73 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~---------------w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~ 73 (150)
.+.+.++++.|+.++..-..+.+... ..| -.+.|..-...+..+. ...+|+.+-...+..
T Consensus 33 ~e~l~~l~~~t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I--~~~E~~~l~~lg~~~~---~~~lf~~~D~d~dG~ 107 (214)
T 2l4h_A 33 KELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQV--PFEQILSLPELKANPF---KERICRVFSTSPAKD 107 (214)
T ss_dssp HHHHHHHHSCCSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEE--CHHHHTTCHHHHTSTT---HHHHHHHHCCSSSCC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccccccccccCCcC--CHHHHHHhhccCCChH---HHHHHHHhCcCCCCC
Confidence 45688899999999877655443321 111 1122211000001112 345676663322357
Q ss_pred -cchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHcCC------CCHHHHHHHHHHHHHHc
Q 031969 74 -ILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGI------DSLDKFRERISFMRAEL 141 (150)
Q Consensus 74 -I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~------dsi~~lk~~l~~l~~~l 141 (150)
|+.+-...++..+.-.......+..++ .+-...-|.|+++||...+..++. -+.+.++..+..+-..+
T Consensus 108 ~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~ 183 (214)
T 2l4h_A 108 SLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEES 183 (214)
T ss_dssp SEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHH
T ss_pred EecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHh
Confidence 999999988887653322222333333 334455699999999999988753 34455665555555555
No 322
>1ufz_A Hypothetical protein BAB28515; HBS1-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, translatio; NMR {Mus musculus} SCOP: a.5.9.1
Probab=55.64 E-value=11 Score=24.95 Aligned_cols=46 Identities=17% Similarity=0.352 Sum_probs=36.1
Q ss_pred CCCcchHHH----HHHHHHHhCC--CHHHHHHHHHhCCCCchhhhhhhhccC
Q 031969 3 KLSRSNRDK----LQQFVSITGA--SEKAALQALKASDWHLEGAFDVFYSQP 48 (150)
Q Consensus 3 ~l~~~~~~~----i~~F~~iT~~--~~~~A~~~L~~~~w~le~Ai~~f~~~~ 48 (150)
.||...+.. +.+-+++.|= ++.+-+..-=++++|++.|+|.+++..
T Consensus 25 ~Ls~~d~arL~SCLd~iR~VlGdsV~e~~Lv~ailk~dfD~ekALd~vL~~~ 76 (83)
T 1ufz_A 25 QLSEIDQARLYSCLDHMREVLGDAVPDDILTEAILKHKFDVQKALSVVLEQD 76 (83)
T ss_dssp HCCHHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHcccCCHHHHHHHHHHhcCCHHHHHHHHHhcc
Confidence 355544444 4688889885 688888888899999999999999664
No 323
>1jw2_A Hemolysin expression modulating protein HHA; structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Escherichia coli} SCOP: a.23.5.1 PDB: 2jvp_A 2k5s_A
Probab=53.90 E-value=9.7 Score=24.61 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=29.2
Q ss_pred ccHHHHHHHhHHcCCCCHHHHHHHHHHHHHHcCCCc
Q 031969 110 FSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDER 145 (150)
Q Consensus 110 ~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~l~~~~ 145 (150)
.|+.+|+--+.+ |.|++.|-+.+..++..|.+++
T Consensus 6 Mtk~d~L~k~Rr--c~s~eTLEkv~e~~~y~Lt~~e 39 (72)
T 1jw2_A 6 LTKTDYLMRLRR--CQTIDTLERVIEKNKYELSDNE 39 (72)
T ss_dssp CCHHHHHHHHHT--SSCHHHHHHHHHHHHHHSCHHH
T ss_pred ccHHHHHHHHHh--cCcHHHHHHHHHHhhccCCHHH
Confidence 389999986665 9999999999999999997653
No 324
>1jms_A Terminal deoxynucleotidyltransferase; polymerase; 2.36A {Mus musculus} SCOP: a.60.6.1 a.60.12.1 d.218.1.2 PDB: 1kdh_A* 1kej_A*
Probab=52.94 E-value=60 Score=26.82 Aligned_cols=100 Identities=12% Similarity=0.112 Sum_probs=61.8
Q ss_pred HHHHHHHHhCCCHH------HHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHh
Q 031969 11 KLQQFVSITGASEK------AALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCN 84 (150)
Q Consensus 11 ~i~~F~~iT~~~~~------~A~~~L~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e 84 (150)
.|..+.++.| ++- .|...|++....+....+ ...-++ . -+.+.+....|.. .|....++
T Consensus 45 ~ia~~~e~~g-~~~rv~AYr~Aa~~l~~l~~~i~~~~~--l~~lpG---I-G~~ia~kI~E~l~--------tG~~~~le 109 (381)
T 1jms_A 45 ILAENDELRE-NEGSCLAFMRASSVLKSLPFPITSMKD--TEGIPC---L-GDKVKSIIEGIIE--------DGESSEAK 109 (381)
T ss_dssp HHHHHHHHTT-CHHHHHHHHHHHHHHHTCSSCCCSGGG--GTTCSS---C-CHHHHHHHHHHHH--------HSSCHHHH
T ss_pred HHHHHHHhhC-CcHHHHHHHHHHHHHHhCCccccCHHH--HhcCCC---C-cHHHHHHHHHHHH--------cCCcHHHH
Confidence 4566777888 744 355556666666644332 112111 1 1233333333332 36666666
Q ss_pred hcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHH
Q 031969 85 DLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE 132 (150)
Q Consensus 85 dLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~ 132 (150)
+|- .|...-.|..+++.+-+|.-|=..|. .. |+.|+++|++
T Consensus 110 ~l~---~d~~~~~l~~l~~I~GvGpk~a~~ly---~~-Gi~tledL~~ 150 (381)
T 1jms_A 110 AVL---NDERYKSFKLFTSVFGVGLKTAEKWF---RM-GFRTLSKIQS 150 (381)
T ss_dssp HHH---HCHHHHHHHHHHTSTTCCHHHHHHHH---HT-TCCSHHHHHH
T ss_pred HHh---cCcchhHHHHHHccCCCCHHHHHHHH---Hc-CCCcHHHHHh
Confidence 662 34677788899999999998888884 45 9999999995
No 325
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=52.60 E-value=36 Score=29.96 Aligned_cols=67 Identities=9% Similarity=0.145 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc-CCC-CCcHHHHHHHHhhccc----ccccccHHHHHHHhHHcC
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVD-PQDIVMLVVSWHMKAA----TMCEFSKQEFIGGLQSLG 123 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-gv~-ped~~~LvLa~~l~a~----~~g~~tr~eF~~g~~~l~ 123 (150)
+..|.++|..|-. +...|+.+.+.+++..+ |.. ..+-.+--|-..+... .-|.|+-+||+.-|..-.
T Consensus 79 ~~el~~aF~~fD~-~~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~ 151 (624)
T 1djx_A 79 RAEIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 151 (624)
T ss_dssp CHHHHHHHHHHHT-TSSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcC-CCCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCcc
Confidence 4679999999976 35699999999999976 543 3322222222333322 359999999999887643
No 326
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=50.80 E-value=9.3 Score=26.61 Aligned_cols=31 Identities=13% Similarity=0.117 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL 86 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL 86 (150)
..++.++|+.|-......|+.+-+...+..+
T Consensus 13 ~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~ 43 (186)
T 2hps_A 13 LRKMKTRMQRVDVTGDGFISREDYELIAVRI 43 (186)
T ss_dssp HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCCCCCccCHHHHHHHHHHH
Confidence 3556667776632223467777777666554
No 327
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=50.48 E-value=44 Score=20.98 Aligned_cols=80 Identities=10% Similarity=0.108 Sum_probs=52.9
Q ss_pred cCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHc---CCC-CH
Q 031969 53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL---GID-SL 127 (150)
Q Consensus 53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l---~~d-si 127 (150)
..+...+.++|..+-. +..|+.+-...++. ..+.....+.-++ .+-...-|.|++++|...+..+ |.. +-
T Consensus 5 ~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~ 79 (109)
T 5pal_A 5 VLKADDINKAISAFKD--PGTFDYKRFFHLVG---LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLND 79 (109)
T ss_dssp TSCHHHHHHHHHHTCS--TTCCCHHHHHHHHT---CTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCH
T ss_pred cCCHHHHHHHHHHhCC--CCcCcHHHHHHHHh---hccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCH
Confidence 3467889999998854 45788777666654 3444444444444 3445567999999999999998 554 45
Q ss_pred HHHHHHHHHH
Q 031969 128 DKFRERISFM 137 (150)
Q Consensus 128 ~~lk~~l~~l 137 (150)
+.++..+..+
T Consensus 80 ~~~~~~~~~~ 89 (109)
T 5pal_A 80 TETKALLAAG 89 (109)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5555554443
No 328
>2i5u_A DNAD domain protein; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG, U function; HET: MSE; 1.50A {Enterococcus faecalis} SCOP: a.275.1.1
Probab=49.46 E-value=15 Score=23.54 Aligned_cols=57 Identities=7% Similarity=0.175 Sum_probs=29.6
Q ss_pred ccchHHHHHHHhhcC---CC---CCcHHHHHHHHhh--cccccccccHHHHHHHhHHcCCCCHHHHH
Q 031969 73 MILVDGITLLCNDLQ---VD---PQDIVMLVVSWHM--KAATMCEFSKQEFIGGLQSLGIDSLDKFR 131 (150)
Q Consensus 73 ~I~~dG~~~~~edLg---v~---ped~~~LvLa~~l--~a~~~g~~tr~eF~~g~~~l~~dsi~~lk 131 (150)
.+..+-+..++++.+ .+ +.+++..++-.-+ +.+++.. -+.-+..|++-|+.|+++.+
T Consensus 18 ~~e~e~i~~w~~~~~~~~~~~~~~~elI~~A~~~av~~~~~~~~Y--i~~IL~~W~~~gi~T~e~v~ 82 (83)
T 2i5u_A 18 SKTMTDFDYWISDFEKIGASQKEAEQLIVKAIEIAIDANARNYNY--INAILKDWEQRGFKSVEERE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTCCSHHH--HHHHHHHHHHHTCCC-----
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHcCCCCHHH--HHHHHHHHHHcCCCCHHHHh
Confidence 445566666676662 11 2334444444433 3333322 46678889999999998865
No 329
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=48.97 E-value=22 Score=32.66 Aligned_cols=68 Identities=13% Similarity=0.157 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCC------------CcHHHHHHHHhh--cc--cccccccHHHHHHHh
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP------------QDIVMLVVSWHM--KA--ATMCEFSKQEFIGGL 119 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~p------------ed~~~LvLa~~l--~a--~~~g~~tr~eF~~g~ 119 (150)
++.|..+|..|.......|+. .+.+|+.+++-++ +.+.-++=-+-. .. ..-|.++.++|+.-|
T Consensus 228 R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL 306 (816)
T 3qr0_A 228 RSEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFL 306 (816)
T ss_dssp CTHHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHh
Confidence 568999999998754568999 9999999998443 223333222211 11 145889999999998
Q ss_pred HHcCC
Q 031969 120 QSLGI 124 (150)
Q Consensus 120 ~~l~~ 124 (150)
..-.+
T Consensus 307 ~S~~~ 311 (816)
T 3qr0_A 307 MCEEN 311 (816)
T ss_dssp HSGGG
T ss_pred hcccc
Confidence 76544
No 330
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=48.15 E-value=15 Score=25.03 Aligned_cols=21 Identities=29% Similarity=0.333 Sum_probs=18.1
Q ss_pred HHHHHHHhCCCHHHHHHHHHh
Q 031969 12 LQQFVSITGASEKAALQALKA 32 (150)
Q Consensus 12 i~~F~~iT~~~~~~A~~~L~~ 32 (150)
+.+|++.+|+|.+.|+.+|+-
T Consensus 83 ~ae~Rd~lg~sRK~ai~lLE~ 103 (121)
T 2pjp_A 83 AADFRDRLGVGRKLAIQILEY 103 (121)
T ss_dssp HHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHHHH
Confidence 689999999999988887763
No 331
>2ihm_A POL MU, DNA polymerase MU; helix-turn-helix, transferase/DNA complex; HET: DNA D3T; 2.40A {Mus musculus}
Probab=47.65 E-value=79 Score=25.81 Aligned_cols=99 Identities=12% Similarity=0.122 Sum_probs=62.0
Q ss_pred HHHHHHHHhCCCHH------HHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHh
Q 031969 11 KLQQFVSITGASEK------AALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCN 84 (150)
Q Consensus 11 ~i~~F~~iT~~~~~------~A~~~L~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~e 84 (150)
.|..+.++.| ++- .|...|++...++....+ ...-++ . -+.+-+....|.+ .|..+.++
T Consensus 26 ~ia~~~e~~g-~~~r~~AYr~Aa~~l~~l~~~i~~~~~--l~~lpG---I-G~~~A~kI~E~l~--------tG~~~~le 90 (360)
T 2ihm_A 26 TLAEAAGFEA-NEGRLLSFSRAASVLKSLPCPVASLSQ--LHGLPY---F-GEHSTRVIQELLE--------HGTCEEVK 90 (360)
T ss_dssp HHHHHHHHTT-CHHHHHHHHHHHHHHHHCSSCCCSGGG--GTTCTT---C-CHHHHHHHHHHHH--------HSCCHHHH
T ss_pred HHHHHHHHcC-CcHHHHHHHHHHHHHHhCCcccCCHHH--HhcCCC---C-CHHHHHHHHHHHH--------cCChHHHH
Confidence 3567777788 754 355556667766654333 122111 1 1333344444433 35566666
Q ss_pred hcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHH
Q 031969 85 DLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131 (150)
Q Consensus 85 dLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk 131 (150)
+|- .|...-.|..+++.+-+|.-|=..|. .. |+.|+++|+
T Consensus 91 ~L~---~d~~~~~l~~l~~I~GvG~kta~~l~---~~-Gi~tledL~ 130 (360)
T 2ihm_A 91 QVR---CSERYQTMKLFTQVFGVGVKTANRWY---QE-GLRTLDELR 130 (360)
T ss_dssp HHH---HSHHHHHHHHHHTSTTCCHHHHHHHH---HT-TCCSHHHHH
T ss_pred HHh---cccchHHHHHHhCCCCCCHHHHHHHH---Hc-CCCCHHHHH
Confidence 662 34677788889999999998888884 35 999999998
No 332
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=47.03 E-value=8.8 Score=27.31 Aligned_cols=65 Identities=15% Similarity=0.172 Sum_probs=45.0
Q ss_pred ccchHHHHHHHhhcCCCCCcHHH-------HHHHHhhcccccc----cccHHHHHHHhHHcCCCCHHHHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIVM-------LVVSWHMKAATMC----EFSKQEFIGGLQSLGIDSLDKFRERISFM 137 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~-------LvLa~~l~a~~~g----~~tr~eF~~g~~~l~~dsi~~lk~~l~~l 137 (150)
+=.++++.+.|+.||++|+++.+ +..|...|....+ .-..++....-...-++|+..+...|...
T Consensus 142 kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 142 STKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL 217 (226)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence 34678999999999999987653 6677788876544 34666654433344567888887766543
No 333
>2oo9_A E3 ubiquitin-protein ligase CBL; alpha-helical domain, homodimer; 2.10A {Homo sapiens}
Probab=46.64 E-value=33 Score=20.21 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969 9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46 (150)
Q Consensus 9 ~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~ 46 (150)
...|+..++ .|-+...|++.|...+-|++.|.|-..+
T Consensus 5 e~~I~~L~s-~Gf~~~~~~rAL~ia~Nnie~A~nIL~e 41 (46)
T 2oo9_A 5 SSEIENLMS-QGYSYQDIQKALVIAQNNIEMAKNILRE 41 (46)
T ss_dssp HHHHHHHHH-TTBCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHhhccHHHHHHHHHH
Confidence 345777766 4889999999999999999999876543
No 334
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=46.26 E-value=14 Score=26.77 Aligned_cols=65 Identities=8% Similarity=0.003 Sum_probs=45.4
Q ss_pred ccchHHHHHHHhhcCCCCCcHH-------HHHHHHhhccccc----ccccHHHHHHHhHHcCCCCHHHHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIV-------MLVVSWHMKAATM----CEFSKQEFIGGLQSLGIDSLDKFRERISFM 137 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~-------~LvLa~~l~a~~~----g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l 137 (150)
+=.++++.+.|+.||++|+++. =+..|...|.... |.-..++....-...-++|+..|...|.+|
T Consensus 166 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~l 241 (243)
T 3qxg_A 166 KPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDTI 241 (243)
T ss_dssp TTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHhh
Confidence 4467899999999999998765 3667777776554 334455554422334568999998888765
No 335
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=45.78 E-value=7.7 Score=30.86 Aligned_cols=36 Identities=19% Similarity=0.155 Sum_probs=9.5
Q ss_pred HHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 12 LQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 12 i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
.+-.+++||++...|...|+++++++-.||-....+
T Consensus 248 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~ 283 (306)
T 1nri_A 248 VRIVMQATDCNKTLAEQTLLEADQNAKLAIMMILST 283 (306)
T ss_dssp HHHHHHHSCCCC------------------------
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCChHHHHHHHHhC
Confidence 455677899999999999999999999999987543
No 336
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=45.21 E-value=55 Score=20.52 Aligned_cols=79 Identities=5% Similarity=-0.022 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH-hhcccccccccHHHHHHHhHHc---CCC-CHH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSL---GID-SLD 128 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l---~~d-si~ 128 (150)
.+...+.++|..+- .+..|+.+-...++. ..+.....+.-++ .+-...-|.|++++|...+..+ +.. +-+
T Consensus 7 ~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~ 81 (109)
T 3fs7_A 7 LSAKDIESALSSCQ--AADSFNYKSFFSTVG---LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSA 81 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHT---CTTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHH
T ss_pred CCHHHHHHHHHhcC--CCCcCcHHHHHHHHh---cCCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHH
Confidence 46789999999985 345888877776654 3444444444444 3445566999999999999998 443 455
Q ss_pred HHHHHHHHH
Q 031969 129 KFRERISFM 137 (150)
Q Consensus 129 ~lk~~l~~l 137 (150)
.++..+..+
T Consensus 82 ~~~~~~~~~ 90 (109)
T 3fs7_A 82 ETKAFLAAG 90 (109)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555544443
No 337
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=43.74 E-value=78 Score=21.85 Aligned_cols=92 Identities=14% Similarity=0.009 Sum_probs=55.8
Q ss_pred CCCcchHHHHHHHHHHhCCCHHHHHHHHHhCC-CCchhhhhhhhccCCCCCcCCHHHHHHHHHH-hcCCCCCccchHHHH
Q 031969 3 KLSRSNRDKLQQFVSITGASEKAALQALKASD-WHLEGAFDVFYSQPQSKSLTDTRHLEELYNR-YKDPYLDMILVDGIT 80 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~A~~~L~~~~-w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~-Y~d~~~d~I~~dG~~ 80 (150)
..++.+.+.+++|..-.|.++..+...++... -....++..+ ..-+ ...-..-+.-+|.= |+|..-+.-...=+.
T Consensus 34 ~v~~~E~~~l~~~l~~lgl~~~e~~~l~~~~~~~~~~~~~~~~-~~~~--~e~r~~ll~~L~~IA~ADG~i~~~E~~lLr 110 (133)
T 2h5n_A 34 KIKPAEIAVMTREFMRFGILQDQVDLLLKASDSIEASQAVALI-ARMD--EERKKYVASYLGVIMASDGDIDDNELALWT 110 (133)
T ss_dssp CCCHHHHHHHHHHHGGGTCCHHHHHHHHHHHTTSCHHHHHHHH-HTSC--HHHHHHHHHHHHHHSCBTTBCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHhccHHHHHHHH-HcCC--HHHHHHHHHHHHHHhhcCCCCCHHHHHHHH
Confidence 46778888899888888999988888888765 3344555433 1111 00011223334432 334322444555678
Q ss_pred HHHhhcCCCCCcHHHHH
Q 031969 81 LLCNDLQVDPQDIVMLV 97 (150)
Q Consensus 81 ~~~edLgv~ped~~~Lv 97 (150)
+.++-||++|.|+.--.
T Consensus 111 ~ia~~Lgls~~d~~~~~ 127 (133)
T 2h5n_A 111 LISTLCGLPTMTVMEAI 127 (133)
T ss_dssp HHHHHHTCCCCCHHHHH
T ss_pred HHHHHcCCCHHHHHHHH
Confidence 88999999999984433
No 338
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=43.11 E-value=53 Score=29.86 Aligned_cols=67 Identities=13% Similarity=0.212 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhc-C-----------CCCCcHHHHHHHHhhcc--cccccccHHHHHHHhHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-Q-----------VDPQDIVMLVVSWHMKA--ATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-g-----------v~ped~~~LvLa~~l~a--~~~g~~tr~eF~~g~~~ 121 (150)
+..|..+|..|-..+.+.|+.+.+.+|+.++ | ++.+++.-++=-+-... ..-|.|+-+||+.-|..
T Consensus 218 r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~S 297 (799)
T 2zkm_X 218 RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCG 297 (799)
T ss_dssp CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcccC
Confidence 4788999999943344699999999999998 4 33455554443322111 14589999999998876
Q ss_pred c
Q 031969 122 L 122 (150)
Q Consensus 122 l 122 (150)
-
T Consensus 298 ~ 298 (799)
T 2zkm_X 298 P 298 (799)
T ss_dssp T
T ss_pred c
Confidence 4
No 339
>3v22_V Ribosome modulation factor; stress response, small subunit H movement, stationary phase, ribosome hibernation; 3.00A {Escherichia coli} PDB: 3v24_V
Probab=42.29 E-value=12 Score=23.39 Aligned_cols=18 Identities=11% Similarity=0.315 Sum_probs=14.1
Q ss_pred ccccccccHHHHHHHhHH
Q 031969 104 AATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 104 a~~~g~~tr~eF~~g~~~ 121 (150)
||-...-.|+.|+.||..
T Consensus 29 CPy~~~~~r~~Wl~GWRe 46 (61)
T 3v22_V 29 CPYQTLNQRSQWLGGWRE 46 (61)
T ss_dssp CCCSSSHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHH
Confidence 555556679999999986
No 340
>2p6v_A Transcription initiation factor TFIID subunit 4; alpha helix; HET: MLY; 2.00A {Homo sapiens} SCOP: a.277.1.1
Probab=42.10 E-value=26 Score=24.50 Aligned_cols=52 Identities=12% Similarity=0.089 Sum_probs=39.3
Q ss_pred CcHHHHHHHHhhcccccccccHHHHHHHhHHc-C----CCCHHHHHHHHHHHHHHcCCCccc
Q 031969 91 QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL-G----IDSLDKFRERISFMRAELKDERTC 147 (150)
Q Consensus 91 ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l-~----~dsi~~lk~~l~~l~~~l~~~~~F 147 (150)
+.|..||..-.- |.|+-|||..-++.. + =.=++=||+.||-||+++.+...|
T Consensus 44 ~~Vr~LVq~Ll~-----~~i~~EeFt~~Lq~~lns~pqP~LvPFLK~sLP~LR~~l~~~~~~ 100 (114)
T 2p6v_A 44 ANVXELVQNLLD-----GXIEAEDFTSRLYRELNSSPQPYLVPFLXRSLPALRQLTPDSAAF 100 (114)
T ss_dssp HHHHHHHHHHHT-----TSSCHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHHHHTCSCHHHH
T ss_pred HHHHHHHHHHHH-----ccCCHHHHHHHHHHHHcCCCCcchHHHHHhhhHHHHHHHHHHHHH
Confidence 346667765443 789999999988874 2 234889999999999999876554
No 341
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=41.29 E-value=34 Score=26.07 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=27.3
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchh
Q 031969 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEG 39 (150)
Q Consensus 7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~ 39 (150)
...++|++|+++ |.++..|+..|+.++|+...
T Consensus 168 ~~~~~v~~~~~m-g~~~~~~~~al~~~~~~~~~ 199 (215)
T 1tte_A 168 IDHDLIDEFESQ-GFEKDKIVEVLRRLGVKSLD 199 (215)
T ss_dssp CSHHHHHHHHHH-TCCHHHHHHHHHHSCCSSCC
T ss_pred ccHHHHHHHHHc-CCCHHHHHHHHHHcCCCccc
Confidence 347899999875 78999999999999998755
No 342
>2es9_A Putative cytoplasmic protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.00A {Salmonella typhimurium} SCOP: a.247.1.1 PDB: 2jn8_A
Probab=40.80 E-value=9.9 Score=26.08 Aligned_cols=20 Identities=30% Similarity=0.267 Sum_probs=16.4
Q ss_pred CccchHHHHHHHhhcCCCCC
Q 031969 72 DMILVDGITLLCNDLQVDPQ 91 (150)
Q Consensus 72 d~I~~dG~~~~~edLgv~pe 91 (150)
|+-...||.+|+.+|||...
T Consensus 34 dESTAKGifKyL~elGvPas 53 (115)
T 2es9_A 34 DESTAKGILKYLHDLGVPVS 53 (115)
T ss_dssp HHHHHHHHHHHHHHTTCCCC
T ss_pred chHHHHHHHHHHHHcCCCCC
Confidence 34567899999999999864
No 343
>3kw6_A 26S protease regulatory subunit 8; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Homo sapiens}
Probab=39.88 E-value=59 Score=19.91 Aligned_cols=67 Identities=9% Similarity=0.031 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHhcCCCC--CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccc--cccccHHHHHHHhHHc
Q 031969 54 TDTRHLEELYNRYKDPYL--DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAAT--MCEFSKQEFIGGLQSL 122 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~--~g~~tr~eF~~g~~~l 122 (150)
++...-.++|..|-..-+ +.++.+-+.+.++ |++..|+..+|---.+.|-. ...+|.+.|...+..+
T Consensus 3 Pd~~~R~~Il~~~l~~~~~~~~~dl~~la~~t~--G~SGADi~~l~~eA~~~a~~~~~~~i~~~d~~~Al~~v 73 (78)
T 3kw6_A 3 PNEEARLDILKIHSRKMNLTRGINLRKIAELMP--GASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 73 (78)
T ss_dssp CCHHHHHHHHHHHHTTSEECTTCCHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCCCccCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHH
Confidence 345555677777765422 3577888888776 89999999988665555543 3468999999887763
No 344
>3zq7_A KDP operon transcriptional regulatory protein KDP; response regulator; 2.52A {Escherichia coli}
Probab=39.79 E-value=61 Score=20.73 Aligned_cols=56 Identities=11% Similarity=0.205 Sum_probs=38.2
Q ss_pred CCCCCcHHHHHHHHhhcccccccccHHHHHHH-hHHcCCCCHHHHHHHHHHHHHHcCC
Q 031969 87 QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG-LQSLGIDSLDKFRERISFMRAELKD 143 (150)
Q Consensus 87 gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g-~~~l~~dsi~~lk~~l~~l~~~l~~ 143 (150)
.+.+..-..-+|+.++..+. -.+||++.++. |..-...+-..++.+|..||+.|.+
T Consensus 26 ~i~Lt~~e~~lL~~L~~~~g-~~vsr~~L~~~vw~~~~~~~~~~l~~~I~rLRkkL~~ 82 (102)
T 3zq7_A 26 EVHLTPIEFRLLAVLLNNAG-KVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQ 82 (102)
T ss_dssp EECCCHHHHHHHHHHHHTTT-CEEEHHHHHHHHTSSSCSTTHHHHHHHHHHHHHHHCS
T ss_pred EEEcCHHHHHHHHHHHHCCC-eeECHHHHHHHhcCCCCCCccchHHHHHHHHHHHhhc
Confidence 34455455556666665543 26999998876 4433345567899999999999964
No 345
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=38.20 E-value=5.2 Score=36.46 Aligned_cols=68 Identities=12% Similarity=0.141 Sum_probs=32.4
Q ss_pred HHHHhcCCCC-CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 031969 62 LYNRYKDPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136 (150)
Q Consensus 62 lFd~Y~d~~~-d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~ 136 (150)
+|..| |.+. ..|+.+-+.+.+..+|+.+.+-.+=.|...+. ..-|.|+.+||+..+..+ +.++.....
T Consensus 809 ~F~~~-D~d~dG~Is~~El~~~l~~~g~~ls~~~~~~l~~~~d-d~dg~Is~~EF~~~~~~l-----~~~~~~F~~ 877 (900)
T 1qxp_A 809 IYKRF-ETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNFISCLVRL-----DAMFRAFRS 877 (900)
T ss_dssp CC-----CCSCC-------CCTTGGGTCCCCSCCCC---------CCSCCCHHHHHHHHHHH-----HHHHHHHHH
T ss_pred HHHHh-CCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHhc-CCCCeECHHHHHHHHHHH-----HHHHHHHHH
Confidence 34444 3333 58888888888899997654333223333444 556999999999998874 444444443
No 346
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=37.84 E-value=52 Score=22.47 Aligned_cols=64 Identities=9% Similarity=0.056 Sum_probs=34.4
Q ss_pred ccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAE 140 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~ 140 (150)
..-+.-+.+.+..||+++.+..+|.....+.....+..|-++--+ .+++ |...+.+.|..|.++
T Consensus 15 ~~i~~~ll~~y~~lgLt~~e~~vll~L~~~~~~~~~~ps~~~LA~---~l~~-s~~~V~~~l~~Le~k 78 (128)
T 2vn2_A 15 IAVPKLLLGHYKQLGLGEGELVLLLHMQSFFEEGVLFPTPAELAE---RMTV-SAAECMEMVRRLLQK 78 (128)
T ss_dssp EEEEHHHHTTTTTTTCCHHHHHHHHHHHHHHTTTCSSCCHHHHHH---TSSS-CHHHHHHHHHHHHHT
T ss_pred eechHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCCCHHHHHH---HHCc-CHHHHHHHHHHHHHC
Confidence 344555666777788887776644444433222222244444333 3444 466666667666654
No 347
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=37.81 E-value=21 Score=24.71 Aligned_cols=63 Identities=10% Similarity=0.025 Sum_probs=43.5
Q ss_pred ccchHHHHHHHhhcCCCCCcHH-------HHHHHHhhccccc------ccccHHHHHHHhHHcCCCCHHHHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIV-------MLVVSWHMKAATM------CEFSKQEFIGGLQSLGIDSLDKFRERISFM 137 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~-------~LvLa~~l~a~~~------g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l 137 (150)
+=.++++.+.++.+|++|+++. =+..|...|.... |.-..+.. . -...-++|+.++...|.++
T Consensus 140 kp~~~~~~~~~~~~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~v~~~~~~~~~~-~-~a~~~~~~~~el~~~l~~l 215 (216)
T 2pib_A 140 KPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALL-E-AGAVALVKPEEILNVLKEV 215 (216)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCEEEEECCSSSCCHHHH-H-TTCSEEECGGGHHHHHHHH
T ss_pred CcCcHHHHHHHHHcCCCCceEEEEeCcHHHHHHHHHcCCcEEehccCCCCCchhhc-c-hhheeeCCHHHHHHHHHHh
Confidence 3467899999999999997654 4667777787666 44445544 3 3344567888887777654
No 348
>3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} SCOP: a.118.3.0 PDB: 3l8n_A 3swv_A
Probab=37.67 E-value=1.3e+02 Score=22.82 Aligned_cols=117 Identities=11% Similarity=0.156 Sum_probs=67.5
Q ss_pred cchHHHHHHHHHHhCCCHHHHHHHHHhCCC--CchhhhhhhhccCCC-----------C-------------------Cc
Q 031969 6 RSNRDKLQQFVSITGASEKAALQALKASDW--HLEGAFDVFYSQPQS-----------K-------------------SL 53 (150)
Q Consensus 6 ~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w--~le~Ai~~f~~~~~~-----------~-------------------~~ 53 (150)
..++..+.+.+...+.+++.++.||.+++- +-..+|..|+-...+ + ..
T Consensus 16 k~rK~~~~~g~~~FN~~PkkGi~~L~~~g~i~~~p~~iA~FL~~~~~L~k~~igeyLg~~~~fn~~vL~~yv~~fdF~~~ 95 (211)
T 3ltl_A 16 KQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGK 95 (211)
T ss_dssp CSHHHHHHHHHHHHHHCHHHHHHHHHHTTSSCSSHHHHHHHHHHCTTSCHHHHHHHHTCCSHHHHHHHHHHHHTSCCCSS
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHcCCCCCCHHHHHHHHHhCcCccHHHHHHHHhccchhHHHHHHHHHHhcCCCCC
Confidence 356788888888888899999999998775 113455566533211 0 01
Q ss_pred CCHHHHHHHHHHhcCCCC----CccchHHHHHHHhhc---CC--CCCcHHHHHHHH-----hhccccc-ccccHHHHHHH
Q 031969 54 TDTRHLEELYNRYKDPYL----DMILVDGITLLCNDL---QV--DPQDIVMLVVSW-----HMKAATM-CEFSKQEFIGG 118 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~----d~I~~dG~~~~~edL---gv--~ped~~~LvLa~-----~l~a~~~-g~~tr~eF~~g 118 (150)
.-+..|..++.+++=|.+ |+|-..=..+||+.= ++ +++.+-+|+.|- -++.|++ -.+|+++|++.
T Consensus 96 ~ld~ALR~fL~~f~LPgEaQ~IdRile~Fa~ry~~~Np~~~~f~s~D~~~iLaySiImLNTDlHn~~vk~kMt~~~Fi~n 175 (211)
T 3ltl_A 96 DFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKM 175 (211)
T ss_dssp CHHHHHHHHHHSSCCCSSHHHHHHHHHHHHHHHHHTCTTCCSCSSHHHHHHHHHHHHHHHHHHTCTTCCSCCCHHHHHHH
T ss_pred CHHHHHHHHHHhCcCCCchhHHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHhhhhcCccccCCCCHHHHHHH
Confidence 113455555555554533 233333455777631 22 333333444333 2455665 68999999997
Q ss_pred hHHc
Q 031969 119 LQSL 122 (150)
Q Consensus 119 ~~~l 122 (150)
.+.+
T Consensus 176 ~rg~ 179 (211)
T 3ltl_A 176 NRGI 179 (211)
T ss_dssp TCSS
T ss_pred hhcc
Confidence 7653
No 349
>3bz6_A UPF0502 protein pspto_2686; APC84902, conserved domain, pseudomonas syringae PV. tomato DC3000, structural genomics, PSI-2; 2.21A {Pseudomonas syringae PV} SCOP: a.4.5.75 a.4.5.75
Probab=37.46 E-value=19 Score=27.20 Aligned_cols=55 Identities=9% Similarity=0.168 Sum_probs=44.8
Q ss_pred HHHhhcCCCCCcHHHHHHHHhhccccccccc-HHHHHHHhHHcCCCCHHHHHHHHHHHHHH
Q 031969 81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFS-KQEFIGGLQSLGIDSLDKFRERISFMRAE 140 (150)
Q Consensus 81 ~~~edLgv~ped~~~LvLa~~l~a~~~g~~t-r~eF~~g~~~l~~dsi~~lk~~l~~l~~~ 140 (150)
+||++|++++..+.+|++..+=|+.+.|++- |.+=+ -..++++.....|..|...
T Consensus 99 r~~~~l~l~~~e~All~~LlLRGpQT~GELRtRs~Rl-----~~F~d~~~Ve~~L~~L~~r 154 (183)
T 3bz6_A 99 KVDKGLELVPAQVILTGLLLLRGPQTVSELLTRSNRM-----HDFEDSEQVVHQLERLIAR 154 (183)
T ss_dssp CHHHHHTCCHHHHHHHHHHHHHCSBCHHHHHHHHTTT-----SCCSSHHHHHHHHHHHHHH
T ss_pred ccchhcCCCHHHHHHHHHHHhcCCCChhHHHHhHhhc-----cccCCHHHHHHHHHHHhcC
Confidence 5789999999999999999999999998863 54422 2568899999999888764
No 350
>1y9i_A Low temperature requirement C protein; structural genomics, protein structure initiative, PSI; 1.80A {Listeria monocytogenes} SCOP: a.195.1.1
Probab=37.05 E-value=35 Score=25.68 Aligned_cols=44 Identities=11% Similarity=0.011 Sum_probs=37.1
Q ss_pred hHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 76 VDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 76 ~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.+.+.+.+++-||+.+|++-++ +.|+.+-.+..|.++-.+...+
T Consensus 11 ~~~~~~~L~~rGVtl~diae~v--~~Lq~~y~p~l~~e~~~e~v~~ 54 (178)
T 1y9i_A 11 ESKARSWLIERGVEIDDIAELV--LFLQQKYHPGLELDICRQNVEH 54 (178)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHH--HHHHTTTSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHH--HHhcCccCCCcCHHHHHHHHHH
Confidence 4568999999999999999888 4888887778999998887665
No 351
>1lva_A Selenocysteine-specific elongation factor; winged-helix, translation; 2.12A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35 a.4.5.35 a.4.5.35 PDB: 2uwm_A 2ply_A 1wsu_A
Probab=36.94 E-value=25 Score=27.12 Aligned_cols=22 Identities=27% Similarity=0.237 Sum_probs=19.7
Q ss_pred HHHHHHHHhCCCHHHHHHHHHh
Q 031969 11 KLQQFVSITGASEKAALQALKA 32 (150)
Q Consensus 11 ~i~~F~~iT~~~~~~A~~~L~~ 32 (150)
.+.+|+..||+|.+.|+.+|+-
T Consensus 218 t~a~~Rd~lg~SRK~aIplLE~ 239 (258)
T 1lva_A 218 GLAEARDALGSSRKYVLPLLEY 239 (258)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHH
T ss_pred CHHHHHHHhCCcHHHHHHHHHH
Confidence 3689999999999999999984
No 352
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=36.27 E-value=25 Score=23.69 Aligned_cols=74 Identities=7% Similarity=0.013 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHH-----HHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITL-----LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKF 130 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~-----~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~l 130 (150)
...+.+++..+ +..|+.+.... ++.....+++...-+.-|..+ =- |.|+.+++...++.+|. |-+.+
T Consensus 11 ~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~--fD-G~I~~~El~~~l~~lG~-t~~ei 82 (123)
T 2kld_A 11 YSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQ--GG-GKLNFDELRQDLKGKGH-TDAEI 82 (123)
T ss_dssp --------------------------------------------CCSCSSTT--TT-TCEEHHHHHHHTTTCCS-SHHHH
T ss_pred HHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHH--hC-CCCCHHHHHHHHHHhCC-CHHHH
Confidence 44566666655 23566666666 554433333222111111111 11 99999999999999998 87777
Q ss_pred HHHHHHH
Q 031969 131 RERISFM 137 (150)
Q Consensus 131 k~~l~~l 137 (150)
+..+..+
T Consensus 83 ~~~~~~~ 89 (123)
T 2kld_A 83 EAIFTKY 89 (123)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666554
No 353
>1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A
Probab=34.39 E-value=1.3e+02 Score=22.77 Aligned_cols=20 Identities=5% Similarity=0.194 Sum_probs=15.1
Q ss_pred ccccc-ccccHHHHHHHhHHc
Q 031969 103 KAATM-CEFSKQEFIGGLQSL 122 (150)
Q Consensus 103 ~a~~~-g~~tr~eF~~g~~~l 122 (150)
+.|++ -..|+++|++..+..
T Consensus 151 Hn~~vk~kMt~~~Fi~n~rgi 171 (203)
T 1r8s_E 151 HNPNVRDKMGLERFVAMNRGI 171 (203)
T ss_dssp HCTTCCSCCCHHHHHHHTTTT
T ss_pred cCcccccccCHHHHHHHhhcc
Confidence 55555 689999999977654
No 354
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=34.36 E-value=66 Score=22.46 Aligned_cols=64 Identities=6% Similarity=0.120 Sum_probs=42.6
Q ss_pred ccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAE 140 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~ 140 (150)
..-|.-+.+...+||+++.+..+|..-..+........|-++.-+ ++|++ .....+.|..|.++
T Consensus 15 ~~ip~~LL~~y~~LgLs~~E~~lLl~L~~~~~~g~~~ps~~~LA~---~~~~s-~~~v~~~L~~L~~K 78 (135)
T 2v79_A 15 STIPNLLLTHYKQLGLNETELILLLKIKMHLEKGSYFPTPNQLQE---GMSIS-VEECTNRLRMFIQK 78 (135)
T ss_dssp EEEEHHHHHHHHHHTCCHHHHHHHHHHHHHHTTTCCSCCHHHHHT---TSSSC-HHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCCCHHHHHH---HHCcC-HHHHHHHHHHHHHC
Confidence 444678889999999999888777777766544444456655444 34443 46666667766654
No 355
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=34.28 E-value=29 Score=25.31 Aligned_cols=63 Identities=13% Similarity=-0.020 Sum_probs=44.8
Q ss_pred chHHHHHHHhhcCCCCCcHH-------HHHHHHhhccccc----cccc----HHHHHHHhHHcCCCCHHHHHHHHHHH
Q 031969 75 LVDGITLLCNDLQVDPQDIV-------MLVVSWHMKAATM----CEFS----KQEFIGGLQSLGIDSLDKFRERISFM 137 (150)
Q Consensus 75 ~~dG~~~~~edLgv~ped~~-------~LvLa~~l~a~~~----g~~t----r~eF~~g~~~l~~dsi~~lk~~l~~l 137 (150)
.++++.++|+.+|++|+++. =+..|...|.... |..+ ++++...-...-++++.++...|...
T Consensus 170 ~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~~ 247 (259)
T 4eek_A 170 HPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEA 247 (259)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHHT
T ss_pred ChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHhc
Confidence 37899999999999998765 3667777787753 4333 56665443445678999988887653
No 356
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=34.23 E-value=11 Score=27.54 Aligned_cols=70 Identities=14% Similarity=0.067 Sum_probs=46.3
Q ss_pred ccchHHHHHHHhhcCCCC-CcHH-------HHHHHHhhcccccccc---------------------------cHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDP-QDIV-------MLVVSWHMKAATMCEF---------------------------SKQEFIG 117 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~p-ed~~-------~LvLa~~l~a~~~g~~---------------------------tr~eF~~ 117 (150)
+=.++++.+.|+.||++| +++. =+..|...|....+.- ++++...
T Consensus 168 kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (277)
T 3iru_A 168 RPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFN 247 (277)
T ss_dssp TTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhh
Confidence 345789999999999999 7655 3666777776543221 1222222
Q ss_pred HhHHcCCCCHHHHHHHHHHHHHHcC
Q 031969 118 GLQSLGIDSLDKFRERISFMRAELK 142 (150)
Q Consensus 118 g~~~l~~dsi~~lk~~l~~l~~~l~ 142 (150)
.-...-++|+..|...|..+.+.+.
T Consensus 248 ~~ad~v~~~~~el~~~l~~~~~~~~ 272 (277)
T 3iru_A 248 AGAHYVIDSVADLETVITDVNRRLA 272 (277)
T ss_dssp HTCSEEESSGGGTHHHHHHHHHHHH
T ss_pred CCCCEEecCHHHHHHHHHHHHHHHh
Confidence 1122345789999999988887763
No 357
>2z9m_A Response regulator YYCF; two-component system, YYCG, helix-turn- helix motif, DNA-binding domain, phosphorylation, transcription; 1.87A {Staphylococcus aureus} PDB: 2zxj_A 2d1v_A
Probab=34.18 E-value=81 Score=20.97 Aligned_cols=60 Identities=7% Similarity=0.062 Sum_probs=40.5
Q ss_pred HhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHH-hHHcCCCCHHHHHHHHHHHHHHcCC
Q 031969 83 CNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG-LQSLGIDSLDKFRERISFMRAELKD 143 (150)
Q Consensus 83 ~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g-~~~l~~dsi~~lk~~l~~l~~~l~~ 143 (150)
+.+-.|.+..-..-+|..++..+. -.+||++.++. |..-...+-..+..+|..||+.|.+
T Consensus 30 ~~g~~i~Lt~~E~~lL~~L~~~~g-~vvsr~~L~~~vW~~~~~~~~~~l~~~I~rLRkkL~~ 90 (120)
T 2z9m_A 30 KRGEDIELTHREFELFHYLSKHMG-QVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIED 90 (120)
T ss_dssp ETTEEECCCHHHHHHHHHHHTTTT-CCEEHHHHHHHHHCTTCCSCTHHHHHHHHHHHHHHCS
T ss_pred ECCEEEeCCHHHHHHHHHHHHCCC-ceEcHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhc
Confidence 333445555555666667765553 36899999876 4432334567899999999999964
No 358
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=33.42 E-value=20 Score=17.71 Aligned_cols=15 Identities=27% Similarity=0.476 Sum_probs=12.6
Q ss_pred ccchHHHHHHHhhcC
Q 031969 73 MILVDGITLLCNDLQ 87 (150)
Q Consensus 73 ~I~~dG~~~~~edLg 87 (150)
.|.+|.+.++.+||-
T Consensus 4 ~~qvDSV~rWmeDLr 18 (22)
T 3ro3_B 4 FMQVDSVQRWMEDLK 18 (26)
T ss_pred hhhhHHHHHHHHHHH
Confidence 367899999999985
No 359
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=33.06 E-value=24 Score=24.34 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhCCC-Cchhhhhhhhcc
Q 031969 10 DKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFYSQ 47 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~~~w-~le~Ai~~f~~~ 47 (150)
+.+.++++ .|-++..|+.-|..++. +++.|++-.+.+
T Consensus 5 ~~l~~L~~-MGF~~~~a~~AL~~t~n~~~e~A~~wL~~~ 42 (126)
T 2lbc_A 5 SSVMQLAE-MGFPLEACRKAVYFTGNMGAEVAFNWIIVH 42 (126)
T ss_dssp HHHHHHHT-TSSCCHHHHHHHHHHTSCCHHHHHHHHHHG
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 56778877 79999999999999976 899999877654
No 360
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=32.83 E-value=39 Score=19.22 Aligned_cols=17 Identities=6% Similarity=0.258 Sum_probs=12.6
Q ss_pred CCCHHHHHHHHHHHHHH
Q 031969 124 IDSLDKFRERISFMRAE 140 (150)
Q Consensus 124 ~dsi~~lk~~l~~l~~~ 140 (150)
-.++..||++|++|+.+
T Consensus 2 sntvkelknyiqeleer 18 (46)
T 3he4_B 2 SNTVKELKNYIQELEER 18 (46)
T ss_dssp -CCHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHH
Confidence 35788889998888764
No 361
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*
Probab=32.83 E-value=57 Score=25.76 Aligned_cols=46 Identities=9% Similarity=0.117 Sum_probs=30.2
Q ss_pred CHHHHHHHHHhCCCCchhhhhhh---hc----cCCCCCcCCHHHHHHHHHHhc
Q 031969 22 SEKAALQALKASDWHLEGAFDVF---YS----QPQSKSLTDTRHLEELYNRYK 67 (150)
Q Consensus 22 ~~~~A~~~L~~~~w~le~Ai~~f---~~----~~~~~~~~~~~~l~~lFd~Y~ 67 (150)
++..-.+||.+++||++.|...+ +. .+.--...++..+..+++.+.
T Consensus 91 dD~~LlRFLRarkfdv~kA~~~L~~~l~wR~~~~~~~~~~~~~~i~~~l~~g~ 143 (316)
T 3hx3_A 91 DSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGY 143 (316)
T ss_dssp CHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHCGGGTTTCCHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCchhhcCCCHHHHHHHHHcCC
Confidence 67789999999999999997764 31 111011234566767676653
No 362
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=32.72 E-value=33 Score=24.37 Aligned_cols=39 Identities=5% Similarity=0.089 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcH
Q 031969 55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~ 93 (150)
..+-...||+.|-....+.-+.+.+.++++.+|++++.+
T Consensus 87 ~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~ 125 (192)
T 3h93_A 87 EHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKF 125 (192)
T ss_dssp CHHHHHHHHHHHHTSCCCCCSHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHcCCCHHHH
Confidence 456677899988765445568899999999999997654
No 363
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=31.75 E-value=37 Score=17.27 Aligned_cols=16 Identities=31% Similarity=0.694 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHcC
Q 031969 127 LDKFRERISFMRAELK 142 (150)
Q Consensus 127 i~~lk~~l~~l~~~l~ 142 (150)
+++|+..|..|+++|+
T Consensus 10 ledlqerlrklrkklr 25 (27)
T 3twe_A 10 LEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6788888888888774
No 364
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=31.63 E-value=37 Score=24.12 Aligned_cols=38 Identities=5% Similarity=-0.004 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV 94 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~ 94 (150)
+-...+|+.|-....+.-+.+.+.++++.+|++++.+.
T Consensus 88 ~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~ 125 (195)
T 3hd5_A 88 DLHPKVFTAIHTERKRLFDKKAMGEWAASQGVDRAKFD 125 (195)
T ss_dssp THHHHHHHHHHTSCCCCCSHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCHHHHH
Confidence 45667888887644455588999999999999986543
No 365
>2zxj_A Transcriptional regulatory protein WALR; two-component system, YYCG, response regulator, helix-turn-H motif, DNA-binding domain; 1.87A {Staphylococcus aureus} PDB: 2d1v_A
Probab=31.63 E-value=99 Score=21.02 Aligned_cols=69 Identities=9% Similarity=0.158 Sum_probs=43.6
Q ss_pred cchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC-CCCHHHHHHHHHHHHHHcCC
Q 031969 74 ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-IDSLDKFRERISFMRAELKD 143 (150)
Q Consensus 74 I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~-~dsi~~lk~~l~~l~~~l~~ 143 (150)
|+++.-.-++..--|.+..-..-+|..++..+.. .+||++.++..-... ..+-..+..+|..||++|.+
T Consensus 21 ld~~~~~v~~~g~~i~Lt~~E~~lL~~L~~~~g~-vvsre~L~~~vWg~~~~~~~~~l~v~I~rLRkKL~~ 90 (120)
T 2zxj_A 21 IYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQ-VMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIED 90 (120)
T ss_dssp EEGGGTEEEETTEEECCCHHHHHHHHHHHTTTTC-CBCHHHHHHHHHCTTCCSCTHHHHHHHHHHHHHHCS
T ss_pred EECCCCEEEECCEEEEcCHHHHHHHHHHHhCCCc-eEcHHHHHHHhcCCCCCCCCcChHHHHHHHHHHHhh
Confidence 4444433344444455555556666777765543 689999987643322 23446789999999999954
No 366
>2hwv_A DNA-binding response regulator VICR; essential response regulator, C-terminal domain, DNA-binding transcription; 1.90A {Enterococcus faecalis}
Probab=31.20 E-value=81 Score=21.20 Aligned_cols=54 Identities=6% Similarity=0.075 Sum_probs=37.7
Q ss_pred CCCcHHHHHHHHhhcccccccccHHHHHHH-hHHcCCCCHHHHHHHHHHHHHHcCC
Q 031969 89 DPQDIVMLVVSWHMKAATMCEFSKQEFIGG-LQSLGIDSLDKFRERISFMRAELKD 143 (150)
Q Consensus 89 ~ped~~~LvLa~~l~a~~~g~~tr~eF~~g-~~~l~~dsi~~lk~~l~~l~~~l~~ 143 (150)
.+..-..-+|+.++..+. -.+||++.++- |..-...+-..++.+|..||+.|.+
T Consensus 43 ~Lt~~E~~LL~~L~~~~g-~vvsre~L~~~vW~~~~~~~~~tl~~~I~rLRkkL~~ 97 (121)
T 2hwv_A 43 ELTHREFELLYYLAKHIG-QVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIED 97 (121)
T ss_dssp ECCHHHHHHHHHHHHTTT-CCBCHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHHCS
T ss_pred ECCHHHHHHHHHHHHcCC-eEEcHHHHHHHHcCCCCCCCccHHHHHHHHHHHHHhh
Confidence 344445556666666553 36999999886 4332235788999999999999954
No 367
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=31.08 E-value=57 Score=19.22 Aligned_cols=21 Identities=14% Similarity=0.259 Sum_probs=18.0
Q ss_pred ccchHHHHHHHhhcCCCCCcH
Q 031969 73 MILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~ 93 (150)
.+.++-+.++|+-||++|+++
T Consensus 47 ~~~~~~l~~ia~~l~v~~~~l 67 (73)
T 3omt_A 47 QPSLETLFDIAEALNVDVREL 67 (73)
T ss_dssp CCCHHHHHHHHHHHTSCGGGG
T ss_pred CCCHHHHHHHHHHHCcCHHHH
Confidence 477889999999999999865
No 368
>1x2i_A HEF helicase/nuclease; alpha helix, helix-hairpin-helix DNA binding domain, homodimer, hydrolase; 1.45A {Pyrococcus furiosus} SCOP: a.60.2.5
Probab=30.94 E-value=85 Score=18.71 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=35.2
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCC
Q 031969 7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDP 69 (150)
Q Consensus 7 ~~~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~ 69 (150)
........+..+-|..+..|..+|+..+ +++...++-.+.-..-+...++...++...+.++
T Consensus 8 ~~~~~~~~L~~i~giG~~~a~~Ll~~fg-s~~~l~~a~~~~L~~i~Gig~~~a~~i~~~~~~~ 69 (75)
T 1x2i_A 8 LAERQRLIVEGLPHVSATLARRLLKHFG-SVERVFTASVAELMKVEGIGEKIAKEIRRVITAP 69 (75)
T ss_dssp HHHHHHHHHTTSTTCCHHHHHHHHHHHC-SHHHHHHCCHHHHTTSTTCCHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHcC-CHHHHHhCCHHHHhcCCCCCHHHHHHHHHHHhCc
Confidence 3344456777888889999999999865 3433222211111111234566666666666554
No 369
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=30.79 E-value=38 Score=24.55 Aligned_cols=38 Identities=13% Similarity=0.098 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~ 93 (150)
.+-+..||+.|-....+.-+.+.+.++++.+|++++.+
T Consensus 105 ~~~~~~l~~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~ 142 (208)
T 3kzq_A 105 EQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQF 142 (208)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCHHHH
Confidence 45678899888653345667889999999999998754
No 370
>2jrm_A Ribosome modulation factor; solution structure, structural genomics, PSI-2, protein initiative, northeast structural genomics consortium; NMR {Vibrio parahaemolyticus}
Probab=30.68 E-value=23 Score=22.37 Aligned_cols=18 Identities=11% Similarity=0.211 Sum_probs=13.9
Q ss_pred ccccccccHHHHHHHhHH
Q 031969 104 AATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 104 a~~~g~~tr~eF~~g~~~ 121 (150)
||-...-.|+.|+.||..
T Consensus 29 CPy~~~~~r~~Wl~GWRe 46 (65)
T 2jrm_A 29 CPYQQVDARSYWLGGWRD 46 (65)
T ss_dssp CCSCSHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHH
Confidence 455556669999999986
No 371
>3l09_A Putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG, protein structure initiative transcription regulator; 2.81A {Jannaschia SP}
Probab=30.41 E-value=28 Score=27.60 Aligned_cols=57 Identities=7% Similarity=0.046 Sum_probs=42.8
Q ss_pred CchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHH
Q 031969 36 HLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVM 95 (150)
Q Consensus 36 ~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~ 95 (150)
.++..|+.|-.... ..-..-|..+|-.|--+.+..|.+..++++++.+||+...+.+
T Consensus 8 ~~~~~i~~~~~~~~---~~a~Sli~tl~Gd~~~~~g~~i~~~~Li~l~~~~Gi~~~avR~ 64 (266)
T 3l09_A 8 PIRPLVEALNAEAP---LKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQAMRV 64 (266)
T ss_dssp SHHHHHHHHHHHSC---CCHHHHHHHHHHHHHHTTCCCEEHHHHHHHHHHTTCCHHHHHH
T ss_pred cHHHHHHHHHhcCC---CChhHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCchHHHH
Confidence 35566666654322 1235667899999988777799999999999999999886654
No 372
>3avx_A Elongation factor TS, elongation factor TU, linke replicase; RNA polymerase, translation, transferase-RNA complex; HET: GH3; 2.41A {Escherichia coli O157} PDB: 3agq_A 3agp_A* 3avu_A 3avv_A 3avt_A* 3avw_A* 3avy_A* 3mmp_A* 3mmp_G* 1efu_B
Probab=30.34 E-value=4.3 Score=39.16 Aligned_cols=37 Identities=19% Similarity=0.194 Sum_probs=32.1
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhc
Q 031969 10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS 46 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~ 46 (150)
++|++.++.||+.=-.+++.|..++||++.|++---.
T Consensus 7 ~~VKeLRe~TGagmmdCKKAL~e~~GD~ekAie~LRk 43 (1289)
T 3avx_A 7 SLVKELRERTGAGMMDCKKALTEANGDIELAIENMRK 43 (1289)
T ss_dssp SCTHHHHTTTCCCTTTTTTTTTTTTTCHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4689999999999889999999999999999986543
No 373
>3rjp_A COVR; winged helix-turn-helix, DNA binding, DNA binding protein; 1.50A {Streptococcus pyogenes}
Probab=30.31 E-value=71 Score=20.17 Aligned_cols=55 Identities=7% Similarity=0.066 Sum_probs=36.5
Q ss_pred CCCcHHHHHHHHhhcccccccccHHHHHHH-hHHcCCCCHHHHHHHHHHHHHHcCCC
Q 031969 89 DPQDIVMLVVSWHMKAATMCEFSKQEFIGG-LQSLGIDSLDKFRERISFMRAELKDE 144 (150)
Q Consensus 89 ~ped~~~LvLa~~l~a~~~g~~tr~eF~~g-~~~l~~dsi~~lk~~l~~l~~~l~~~ 144 (150)
.+..-..-+|+.++..+. -.+||++.++. |..-...+-..+..+|..||+.|.+.
T Consensus 22 ~Lt~~E~~lL~~L~~~~g-~~vsr~~L~~~vw~~~~~~~~~~l~~~I~rLRkkL~~~ 77 (96)
T 3rjp_A 22 SLTKREYDLLNILMTNMN-RVMTREELLSNVWKYDEAVETNVVDVYIRYLRGKIDIP 77 (96)
T ss_dssp ECCHHHHHHHHHHHHTTT-SCBCHHHHHHHHSSSCSSCCTHHHHHHHHHHHHHHCCT
T ss_pred EcCHHHHHHHHHHHhCCC-eeEcHHHHHHHHcCCCCCCCcchHHHHHHHHHHHhccc
Confidence 344445556666665442 36999999886 43222345689999999999999643
No 374
>2jqt_A H-NS/STPA-binding protein 2; CNU, YDGT, replication origin associated, ORIC, protein binding; NMR {Escherichia coli}
Probab=30.23 E-value=19 Score=23.11 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=26.6
Q ss_pred cHHHHHHHhHHcCCCCHHHHHHHHHHHHHHcCCC
Q 031969 111 SKQEFIGGLQSLGIDSLDKFRERISFMRAELKDE 144 (150)
Q Consensus 111 tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~l~~~ 144 (150)
|+.+|+--+.+ |.|++.|-+.+..++..|.++
T Consensus 2 tk~d~L~kfRk--c~s~eTLEkv~e~~~y~L~~~ 33 (71)
T 2jqt_A 2 TVQDYLLKFRK--ISSLESLEKLYDHLNYTLTDD 33 (71)
T ss_dssp CCCCTHHHHHH--CCCSHHHHHHHHHHHHHTCSH
T ss_pred CHHHHHHHHHh--cCcHHHHHHHHHHhhccCCCH
Confidence 56677766665 999999999999999999876
No 375
>2jzy_A Transcriptional regulatory protein PCOR; two-component-system response regulator, effector domain, DNA-binding, phosphoprotein, plasmid; NMR {Klebsiella pneumoniae}
Probab=30.01 E-value=67 Score=21.21 Aligned_cols=56 Identities=4% Similarity=0.079 Sum_probs=38.7
Q ss_pred CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC-CCCHHHHHHHHHHHHHHcCC
Q 031969 87 QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-IDSLDKFRERISFMRAELKD 143 (150)
Q Consensus 87 gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~-~dsi~~lk~~l~~l~~~l~~ 143 (150)
.|.+..-..-+|+.++..+. -.+||++.++..-.-. ..+-..+..+|..||+.|.+
T Consensus 26 ~i~Lt~~E~~lL~~L~~~~g-~vvsre~L~~~vW~~~~~~~~~~l~~~I~rLRkkL~~ 82 (112)
T 2jzy_A 26 KIHLTGKEYVLLELLLQRTG-EVLPRSLISSLVWNMNFDSDTNVIDVAVRRLRSKIDD 82 (112)
T ss_dssp ECCCCHHHHHHHHHHHHTTT-SCBCHHHHHHHHTCCCSSCSTTHHHHHHHHHHTTTTT
T ss_pred EEecCHHHHHHHHHHHHCCC-ceEcHHHHHHHhcCCCCCCCcchHHHHHHHHHHHhcC
Confidence 34555555666777776553 3699999998643322 24567899999999999964
No 376
>1rfz_A Hypothetical protein APC35681; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.80A {Geobacillus stearothermophilus} SCOP: a.195.1.1
Probab=29.75 E-value=54 Score=24.35 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=36.4
Q ss_pred hHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHH
Q 031969 76 VDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS 121 (150)
Q Consensus 76 ~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 121 (150)
.+.+.+.+++=||+.+|++-++ +.|+.+-.+..|.++-.+...+
T Consensus 13 ~~~~~~~L~~rGVtl~dia~~~--~~Lq~~y~p~l~~e~~~e~v~~ 56 (168)
T 1rfz_A 13 EQTARRWLEERGVTVEKIAELV--YYLQSKYHPDLTMEECIENVNR 56 (168)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHH--HHHHTTTCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHH--HHhcCccCCCcCHHHHHHHHHH
Confidence 4568899999999999999888 5588887777899998876655
No 377
>1zx4_A P1 PARB, plasmid partition PAR B protein, PARB; translation; HET: CIT; 2.98A {Enterobacteria phage P1} PDB: 2ntz_A
Probab=29.51 E-value=81 Score=23.68 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=38.7
Q ss_pred HHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcC
Q 031969 14 QFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKD 68 (150)
Q Consensus 14 ~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d 68 (150)
+.....|+|.....++|+.+.|..+ +-.-|..+.+-+.++-..|.++++.+..
T Consensus 29 eIA~~lGiSr~~VSR~L~~A~~~~~--lv~lfp~~~~ls~p~~~~L~k~~~~l~~ 81 (192)
T 1zx4_A 29 DIAAKEGLSQAKVTRALQAASAPEE--LVALFPVQSELTFSDYKTLCAVGDEMGN 81 (192)
T ss_dssp HHHHHHTCCHHHHHHHHHHHTSCHH--HHTTCSCGGGCCHHHHHHHHHHHHHTTT
T ss_pred HHHHHhCcCHHHHHHHHHHhccchh--hHHHcCCcccCccchHHHHHHHHHHhhh
Confidence 4455689999999999999999774 5666766665455566677777777644
No 378
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=29.50 E-value=33 Score=22.13 Aligned_cols=22 Identities=23% Similarity=0.401 Sum_probs=19.0
Q ss_pred ccchHHHHHHHhhcCCCCCcHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIV 94 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~ 94 (150)
.+.++-+.++|+-||++|+++.
T Consensus 62 ~~s~~~l~kIa~~L~v~~~~L~ 83 (88)
T 3t76_A 62 NVSLTVLLAICEYLNCDFGDII 83 (88)
T ss_dssp CCCHHHHHHHHHHHTCCGGGTC
T ss_pred CcCHHHHHHHHHHHCcCHHHHh
Confidence 3688999999999999998863
No 379
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=29.45 E-value=83 Score=22.90 Aligned_cols=39 Identities=13% Similarity=0.216 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhh-cCCCCCcHH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQDIV 94 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~ed-Lgv~ped~~ 94 (150)
.+-...||+.+.....+..+.+-+.++++. +|++++.+.
T Consensus 98 ~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~ 137 (202)
T 3gha_A 98 WDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLK 137 (202)
T ss_dssp HHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHH
T ss_pred HHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHHHHH
Confidence 355667888876533345678889999999 999987543
No 380
>4e71_A Plexin-B2, MM1; transmembrane, signaling, RBD, structural genomics consortium, SGC, signaling protein; 2.26A {Homo sapiens}
Probab=29.31 E-value=24 Score=24.52 Aligned_cols=16 Identities=25% Similarity=0.544 Sum_probs=13.7
Q ss_pred HHcCCCCHHHHHHHHH
Q 031969 120 QSLGIDSLDKFRERIS 135 (150)
Q Consensus 120 ~~l~~dsi~~lk~~l~ 135 (150)
+-|.||||.+.|++|-
T Consensus 29 kVLdCDTItQvKeKiL 44 (111)
T 4e71_A 29 KVLNCDTISQVKEKII 44 (111)
T ss_dssp EEETTCBHHHHHHHHH
T ss_pred eeeccCcHHHHHHHHH
Confidence 3579999999999974
No 381
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=29.17 E-value=39 Score=24.40 Aligned_cols=37 Identities=3% Similarity=0.120 Sum_probs=28.6
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHhhc-CCCCCcHH
Q 031969 58 HLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIV 94 (150)
Q Consensus 58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~edL-gv~ped~~ 94 (150)
-...+|+.|-....+.-+.+.+..+++.+ |++++.+.
T Consensus 91 ~~~~lf~a~~~~~~~~~~~~~l~~~a~~~~Gld~~~~~ 128 (193)
T 3hz8_A 91 ANSHIFDAMVNQKIKLQNPEVLKKWLGEQTAFDGKKVL 128 (193)
T ss_dssp HHHHHHHHHHTSCCCTTSHHHHHHHHHHCTTTTHHHHH
T ss_pred HHHHHHHHHHHhCcCCCCHHHHHHHHHHccCCCHHHHH
Confidence 45678888876544556889999999999 99987654
No 382
>2l9b_A MRNA 3'-END-processing protein RNA15; 3' END mRNA maturation, transcription; NMR {Saccharomyces cerevisiae}
Probab=29.13 E-value=25 Score=24.44 Aligned_cols=37 Identities=22% Similarity=0.109 Sum_probs=28.8
Q ss_pred CCcch-HHHHHHHHHHhCCCHHHHHHHHHhCCCCchhhh
Q 031969 4 LSRSN-RDKLQQFVSITGASEKAALQALKASDWHLEGAF 41 (150)
Q Consensus 4 l~~~~-~~~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai 41 (150)
|.+.| -+.++++..++..++..|+.+|+++- .|-+|+
T Consensus 49 lpp~Ql~eiL~qmK~~~~~nP~~a~~LL~q~P-QLAyAl 86 (109)
T 2l9b_A 49 KPKEVQLKFLQKFQEWTRAHPEDAASLLELCP-QLSFVT 86 (109)
T ss_dssp SCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCH-HHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHCc-hHHHHH
Confidence 44433 45679999999999999999999987 565554
No 383
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=28.94 E-value=44 Score=24.06 Aligned_cols=83 Identities=8% Similarity=0.028 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHH--------------HHHHHhhcccccccccHHHHHHHh--
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVM--------------LVVSWHMKAATMCEFSKQEFIGGL-- 119 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~--------------LvLa~~l~a~~~g~~tr~eF~~g~-- 119 (150)
.+-...||..|-....+.-+.+.+.++++.+|++++.+.. .-+|..+|....=.|-- +.+|=
T Consensus 112 ~~~~~~lf~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~g~Pt~~i--~~~G~~~ 189 (216)
T 2in3_A 112 FPFFAAIQRAFYVGQEDVAQLAILKKLAVDLGIPESRFTPVFQSDEAKQRTLAGFQRVAQWGISGFPALVV--ESGTDRY 189 (216)
T ss_dssp HHHHHHHHHHHHTTCCCTTSHHHHHHHHHHTTCCHHHHHHHHHSHHHHHHHHHHHHHHHHTTCCSSSEEEE--EETTEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcchHHHHHHHHHHHHHHHcCCcccceEEE--EECCEEE
Confidence 4556778888765333334678899999999999865532 12233333221111100 00332
Q ss_pred -HHcCCCCHHHHHHHHHHHHHH
Q 031969 120 -QSLGIDSLDKFRERISFMRAE 140 (150)
Q Consensus 120 -~~l~~dsi~~lk~~l~~l~~~ 140 (150)
.-.|..+.+.+.+.|..+..+
T Consensus 190 ~~~~G~~~~~~l~~~l~~~~~~ 211 (216)
T 2in3_A 190 LITTGYRPIEALRQLLDTWLQQ 211 (216)
T ss_dssp EEESSCCCHHHHHHHHHHHHHH
T ss_pred EeccCCCCHHHHHHHHHHHHHh
Confidence 234778899999998877665
No 384
>1b43_A Protein (FEN-1); nuclease, DNA repair, DNA replication, transferase; 2.00A {Pyrococcus furiosus} SCOP: a.60.7.1 c.120.1.2 PDB: 1mc8_A
Probab=28.88 E-value=1.5e+02 Score=23.66 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=43.5
Q ss_pred HhCCCHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCC-----CccchHHHHHHH-hhcCCCCC
Q 031969 18 ITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYL-----DMILVDGITLLC-NDLQVDPQ 91 (150)
Q Consensus 18 iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~-----d~I~~dG~~~~~-edLgv~pe 91 (150)
+-|+-+++|..++++++ +++..+.. +.. ...+++.++|-+..-.+. ...+.+++..|+ +.+|.+.+
T Consensus 242 v~GiG~ktA~kli~~~g-sle~il~~----~~~---~~~~~~~~~~~~~~v~d~~~~~~~~pd~~~l~~~~~~~~~f~~~ 313 (340)
T 1b43_A 242 IKGIGLKKALEIVRHSK-DPLAKFQK----QSD---VDLYAIKEFFLNPPVTDNYNLVWRDPDEEGILKFLCDEHDFSEE 313 (340)
T ss_dssp STTCCHHHHHHHHHTCS-SGGGGTGG----GCS---SCHHHHHHHHHSCCCCCCCCCCCCCCCHHHHHHHHTTTTCCCHH
T ss_pred CCCccHHHHHHHHHHcC-CHHHHHcC----CCC---ccHHHHHHHHhCCCCCCcccCCCCCCCHHHHHHHHHHhcCCCHH
Confidence 33455799999999996 66655544 322 123455566655431111 257889999987 99999886
Q ss_pred cHH
Q 031969 92 DIV 94 (150)
Q Consensus 92 d~~ 94 (150)
-+.
T Consensus 314 rv~ 316 (340)
T 1b43_A 314 RVK 316 (340)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 385
>2bcq_A DNA polymerase lambda; misalignment, extrahelical, mutagenesis, mutation, deletion, streisinger, slippage, transferase, lyase/DNA complex; HET: DNA; 1.65A {Homo sapiens} SCOP: a.60.6.1 a.60.12.1 d.218.1.2 PDB: 1xsl_A* 2bcr_A* 2bcs_A* 2bcu_A* 2bcv_A* 2gws_A* 3c5g_A* 3c5f_A* 2pfn_A* 1xsp_A* 1xsn_A* 2pfo_A* 2pfp_A* 2pfq_A* 3hw8_A* 3hwt_A* 1rzt_A* 3hx0_A* 3mdc_A* 3mda_A* ...
Probab=28.44 E-value=84 Score=25.40 Aligned_cols=99 Identities=16% Similarity=0.154 Sum_probs=58.7
Q ss_pred HHHHHHHhCCCH-----HHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhc
Q 031969 12 LQQFVSITGASE-----KAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDL 86 (150)
Q Consensus 12 i~~F~~iT~~~~-----~~A~~~L~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edL 86 (150)
|..+.++.|.+- ..|...|++....+....+ ...-++ . -+.+-+....|.+ .|..+.+++|
T Consensus 23 ia~~~e~~g~~~r~~AYr~Aa~~l~~l~~~i~~~~~--l~~lpG---I-G~~~A~kI~E~l~--------tG~~~~le~l 88 (335)
T 2bcq_A 23 LAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQE--ACSIPG---I-GKRMAEKIIEILE--------SGHLRKLDHI 88 (335)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHSCCSCCCCHHH--HHTSTT---C-CHHHHHHHHHHHH--------SSSCGGGGGC
T ss_pred HHHHHHHcCccHhHHHHHHHHHHHHhCCccccCHHH--HhcCCC---c-cHHHHHHHHHHHH--------cCCchHHHHH
Confidence 455666666652 2466667777776654333 122111 1 1334444444443 2666777887
Q ss_pred CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHH
Q 031969 87 QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRER 133 (150)
Q Consensus 87 gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~ 133 (150)
. ++ +. +|-.+.+.+-+|.-|=..|. .. |+.|+++|+.+
T Consensus 89 ~--~~-~p--~l~ll~~v~GiG~k~a~~l~---~~-Gi~tledL~~a 126 (335)
T 2bcq_A 89 S--ES-VP--VLELFSNIWGAGTKTAQMWY---QQ-GFRSLEDIRSQ 126 (335)
T ss_dssp C--TT-HH--HHHHHHTSTTCCHHHHHHHH---HT-TCCSHHHHHHH
T ss_pred h--hh-hH--HHHHHhcCCCcCHHHHHHHH---Hc-CCCCHHHHHHH
Confidence 3 33 22 45445599999998887774 35 99999999975
No 386
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=28.14 E-value=1.3e+02 Score=24.43 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=8.4
Q ss_pred HHHHHHhhcCCCCCcHH
Q 031969 78 GITLLCNDLQVDPQDIV 94 (150)
Q Consensus 78 G~~~~~edLgv~ped~~ 94 (150)
-++.|+.-||++++++.
T Consensus 80 ~~i~~L~~LGls~e~V~ 96 (335)
T 4fp9_B 80 DIISEFILLGLNPEPVC 96 (335)
T ss_dssp HHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHcCCCHHHHH
Confidence 34445555555555444
No 387
>3q8k_A Flap endonuclease 1; helix-3 turn-helix, hydrophobic wedge, 3' flap binding site, hydrolase-DNA complex, DNA repair, replication; HET: DNA; 2.20A {Homo sapiens} PDB: 3q8l_A* 3q8m_A*
Probab=28.09 E-value=2.3e+02 Score=22.71 Aligned_cols=82 Identities=10% Similarity=0.123 Sum_probs=52.1
Q ss_pred HHHHHHHHHhC---------CCHHHHHHHHHhCCCCchhhhhhhhccCCC-CCcCCHHHHHHHHHHhcC---CCC-----
Q 031969 10 DKLQQFVSITG---------ASEKAALQALKASDWHLEGAFDVFYSQPQS-KSLTDTRHLEELYNRYKD---PYL----- 71 (150)
Q Consensus 10 ~~i~~F~~iT~---------~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~-~~~~~~~~l~~lFd~Y~d---~~~----- 71 (150)
+.+-.|+.++| +-+++|.++|++++ +|+..++..=..... ...-......++| -..+ +.+
T Consensus 220 ~q~id~~~L~G~D~~~gipGiG~KtA~kll~~~g-sle~i~~~~~~~k~~~~~~~~~~~~r~l~-l~~~V~~~~~~~l~~ 297 (341)
T 3q8k_A 220 EQFVDLCILLGSDYCESIRGIGPKRAVDLIQKHK-SIEEIVRRLDPNKYPVPENWLHKEAHQLF-LEPEVLDPESVELKW 297 (341)
T ss_dssp HHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHC-SHHHHHHHSCTTTSCCCTTCCHHHHHHHH-HSCCCCCTTTSCCCC
T ss_pred HHHHHHHHhcCCCCCCCCCCccHHHHHHHHHHcC-CHHHHHHHHHhcCCCCCcccchHHHHHHh-CCCCCCCCcccccCC
Confidence 45667777777 56899999999998 676655544211111 1111245677788 3332 111
Q ss_pred CccchHHHHHHH-hhcCCCCCcH
Q 031969 72 DMILVDGITLLC-NDLQVDPQDI 93 (150)
Q Consensus 72 d~I~~dG~~~~~-edLgv~ped~ 93 (150)
...+.+++..|+ +.+|.+++-+
T Consensus 298 ~~pd~~~l~~fl~~~~~f~~~rv 320 (341)
T 3q8k_A 298 SEPNEEELIKFMCGEKQFSEERI 320 (341)
T ss_dssp CCCCHHHHHHHHTTTTCCCHHHH
T ss_pred CCCCHHHHHHHHHHhcCCCHHHH
Confidence 268889999998 9999887644
No 388
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=27.98 E-value=76 Score=19.13 Aligned_cols=36 Identities=8% Similarity=0.194 Sum_probs=29.6
Q ss_pred CccchHHHHHHHhhcCCCCCcHHHHHHHHhhccccc
Q 031969 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATM 107 (150)
Q Consensus 72 d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~ 107 (150)
..|..+.+.+.++.-|++.|+..+=.++-.|.-.++
T Consensus 15 ~~~t~~~I~~il~aaGveve~~~~~~~~~~L~gk~i 50 (58)
T 3a1y_A 15 KEINEENLKAVLQAAGVEPEEARIKALVAALEGVNI 50 (58)
T ss_dssp CCCCHHHHHHHHHHTTCCCCHHHHHHHHHHHSSCCH
T ss_pred CCCCHHHHHHHHHHcCCCccHHHHHHHHHHHCCCCH
Confidence 468899999999999999998888777777765544
No 389
>3kuz_A Plexin-C1; structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=27.79 E-value=26 Score=24.92 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=14.3
Q ss_pred HcCCCCHHHHHHHHHHH
Q 031969 121 SLGIDSLDKFRERISFM 137 (150)
Q Consensus 121 ~l~~dsi~~lk~~l~~l 137 (150)
-|.||||.+.|.+|-+-
T Consensus 45 VLdCDTItQVKEKILda 61 (126)
T 3kuz_A 45 VLDCDTIGQAKEKIFQA 61 (126)
T ss_dssp EETTCBHHHHHHHHHHH
T ss_pred eecCCcHHHHHHHHHHH
Confidence 68999999999997443
No 390
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=27.15 E-value=35 Score=22.00 Aligned_cols=30 Identities=10% Similarity=0.217 Sum_probs=25.0
Q ss_pred HHHHHHhhcCCCCCcHHHHHHHHhhccccc
Q 031969 78 GITLLCNDLQVDPQDIVMLVVSWHMKAATM 107 (150)
Q Consensus 78 G~~~~~edLgv~ped~~~LvLa~~l~a~~~ 107 (150)
-....|++||+++.+.+-+.+-+...-..+
T Consensus 15 ~a~~v~~~lGl~~s~Ai~~fl~~v~~~~~i 44 (79)
T 4fxe_A 15 RSYAALEKMGVTPSEALRLMLEYIADNERL 44 (79)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhCCC
Confidence 467889999999999999999888765554
No 391
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=27.14 E-value=1.1e+02 Score=19.15 Aligned_cols=37 Identities=11% Similarity=0.028 Sum_probs=31.7
Q ss_pred CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccc
Q 031969 72 DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMC 108 (150)
Q Consensus 72 d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g 108 (150)
..|..+.+.+.++.-||+.|+..+=.++-.|.-..+.
T Consensus 21 ~~~ta~~I~~il~AaGveve~~~~~lf~~aL~gk~I~ 57 (69)
T 2lbf_A 21 VTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIG 57 (69)
T ss_dssp CCCCHHHHHHHHHHHTCCCCTHHHHHHHHHTTTSCGG
T ss_pred CCCCHHHHHHHHHHcCCCccHHHHHHHHHHHCCCCHH
Confidence 4789999999999999999999888888888766553
No 392
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=27.07 E-value=1.1e+02 Score=18.36 Aligned_cols=69 Identities=14% Similarity=0.193 Sum_probs=39.2
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS 135 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~ 135 (150)
..+.+++...-+-+++.|+++- .|..|||+ +++..+-|...+...---.|+-+++ .++.|+.++-.+|.
T Consensus 10 ~~l~~~i~~~l~~~~~~i~~~~--~l~~dlG~--DSl~~~~l~~~le~~fgi~i~~~~~------~~~~Tv~~l~~~i~ 78 (82)
T 2cnr_A 10 AGLAEIVNEIAGIPVEDVKLDK--SFTDDLDV--DSLSMVEVVVAAEERFDVKIPDDDV------KNLKTVGDATKYIL 78 (82)
T ss_dssp HHHHHHHHHHSCCCTTTCCTTS--BTTTTSCC--CHHHHHHHHHHHHGGGTBCCCGGGG------GTCSBHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCCCc--chhhccCC--ChHHHHHHHHHHHHHhCCCCCHHHH------HHcCCHHHHHHHHH
Confidence 3455555555443334566653 45578887 5555555555555443223554432 35788888887774
No 393
>4e74_A Plexin-A4; RBD, structural genomics, structural genomics consor SGC, signaling protein; 1.58A {Homo sapiens} PDB: 3q3j_A*
Probab=26.96 E-value=27 Score=24.46 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=13.7
Q ss_pred HHcCCCCHHHHHHHHH
Q 031969 120 QSLGIDSLDKFRERIS 135 (150)
Q Consensus 120 ~~l~~dsi~~lk~~l~ 135 (150)
+-|.||||.+.|++|-
T Consensus 32 kVLdCDTItQvKeKiL 47 (117)
T 4e74_A 32 KILNCDTITQVKEKIL 47 (117)
T ss_dssp EEETTSBHHHHHHHHH
T ss_pred eeecCCchHHHHHHHH
Confidence 3679999999999974
No 394
>2qho_B E3 ubiquitin-protein ligase EDD1; protein-protein complex, protein binding/ligase complex; 1.85A {Homo sapiens}
Probab=26.87 E-value=63 Score=19.33 Aligned_cols=39 Identities=15% Similarity=0.267 Sum_probs=31.7
Q ss_pred HHHHHHHHHHh-CCCHHHHHHHHHhCCCCchhhhhhhhcc
Q 031969 9 RDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQ 47 (150)
Q Consensus 9 ~~~i~~F~~iT-~~~~~~A~~~L~~~~w~le~Ai~~f~~~ 47 (150)
.++|.|-..+. |-|..+-++=|++.|-+++.|+|...+.
T Consensus 10 e~li~q~q~VLqgksR~vIirELqrTnLdVN~AvNNlLsR 49 (53)
T 2qho_B 10 EELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSR 49 (53)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHHHHTTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHhCccHHHHHHHHhcc
Confidence 56777766655 5678899999999999999999998754
No 395
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=26.52 E-value=81 Score=18.23 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=18.1
Q ss_pred ccchHHHHHHHhhcCCCCCcH
Q 031969 73 MILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~ 93 (150)
.+.++-+.++|+-||++|+++
T Consensus 52 ~~~~~~l~~l~~~l~~~~~~l 72 (74)
T 1y7y_A 52 NVSLVNILKLATALDIEPREL 72 (74)
T ss_dssp CCBHHHHHHHHHHTTSCGGGG
T ss_pred CCCHHHHHHHHHHhCcCHHHH
Confidence 567788999999999999865
No 396
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=26.20 E-value=63 Score=23.77 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~ 93 (150)
.+-...||+.|-....+.-+.+.+.++++++|++.+|+
T Consensus 115 ~~~~~alf~a~~~~~~~i~~~~~L~~~a~~~Gl~~~d~ 152 (226)
T 1r4w_A 115 EKVSRELWMRIWSRDEDITESQNILSAAEKAGMATAQA 152 (226)
T ss_dssp HHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCchhH
Confidence 45567788877543333346788999999999975543
No 397
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=26.09 E-value=46 Score=24.10 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=26.1
Q ss_pred HHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHH
Q 031969 60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV 94 (150)
Q Consensus 60 ~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~ 94 (150)
..+|+.|..... .-+.+.+.++++++|++++.+.
T Consensus 92 ~~lf~a~~~~~~-~~~~~~L~~~a~~~Gld~~~~~ 125 (191)
T 3l9s_A 92 VPLFEAVQKTQT-VQSAADIRKVFVDAGVKGEDYD 125 (191)
T ss_dssp HHHHHHHHTSCC-CSSHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHhcCC-CCCHHHHHHHHHHcCCCHHHHH
Confidence 678988776433 4578899999999999987543
No 398
>1gxq_A PHOB, phosphate regulon transcriptional regulatory protein; transcriptional activator, helix-winged-helix, sensory transduction; 2.0A {Escherichia coli} SCOP: a.4.6.1 PDB: 1gxp_A 1qqi_A 2z33_A 3t72_A
Probab=25.97 E-value=1.2e+02 Score=19.50 Aligned_cols=56 Identities=9% Similarity=0.137 Sum_probs=38.9
Q ss_pred CCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC-CCCHHHHHHHHHHHHHHcCC
Q 031969 87 QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-IDSLDKFRERISFMRAELKD 143 (150)
Q Consensus 87 gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~-~dsi~~lk~~l~~l~~~l~~ 143 (150)
.|.+..-..-+|+.++..+. -.+||++.++-.-.-. ..+-..+..+|..||+.|.+
T Consensus 29 ~i~Lt~~E~~lL~~L~~~~g-~vvsr~~L~~~vW~~~~~~~~~~l~~~I~rLRkkL~~ 85 (106)
T 1gxq_A 29 PLEMGPTEFKLLHFFMTHPE-RVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEP 85 (106)
T ss_dssp ECCCCHHHHHHHHHHHHSCS-SEECHHHHHHHHTCSSSCCCTHHHHHHHHHHHHHHGG
T ss_pred EEEcCHHHHHHHHHHHHCCC-eeEcHHHHHHHHcCCCCCCCcccHHHHHHHHHHHhcc
Confidence 34555555666777776554 4799999988643222 24678899999999999953
No 399
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=25.83 E-value=33 Score=20.82 Aligned_cols=23 Identities=9% Similarity=0.182 Sum_probs=19.7
Q ss_pred HHhCCCHHHHHHHHHhCCCCchh
Q 031969 17 SITGASEKAALQALKASDWHLEG 39 (150)
Q Consensus 17 ~iT~~~~~~A~~~L~~~~w~le~ 39 (150)
+++|.+...|+..|++.++.+..
T Consensus 12 dv~G~~~~~A~~~L~~~Gl~~~~ 34 (71)
T 3ouv_A 12 DVAGQTVDVAQKNMNVYGFTKFS 34 (71)
T ss_dssp CCTTCBHHHHHHHHHHTTCCCEE
T ss_pred CcCCCCHHHHHHHHHHCCCeEEE
Confidence 46899999999999999998753
No 400
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=25.76 E-value=63 Score=22.07 Aligned_cols=57 Identities=14% Similarity=0.342 Sum_probs=37.2
Q ss_pred hhhhhccCCCCCcCCHHHHHHHHHHhc-CCCCCccchHHHHHHHhhcCCCCCcHHHHHHHH
Q 031969 41 FDVFYSQPQSKSLTDTRHLEELYNRYK-DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW 100 (150)
Q Consensus 41 i~~f~~~~~~~~~~~~~~l~~lFd~Y~-d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~ 100 (150)
+.-.|+.| +...++...|.+-|+-+- +++++. +|-...+|.--++++++++--.+|+
T Consensus 14 ~~~~~~~~-~~~~Vsae~L~eEfdefGi~~~d~V--ldKc~ELC~~y~lda~e~VeeWmAF 71 (101)
T 2keb_A 14 LEVLFQGP-GSMSASAQQLAEELQIFGLDCEEAL--IEKLVELCVQYGQNEEGMVGELIAF 71 (101)
T ss_dssp -----------CCCCHHHHHHHHHHHTCBCCHHH--HHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred chheeeCC-chhhccHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34445544 346788999999999997 444433 4889999999999888777766666
No 401
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=25.68 E-value=1.1e+02 Score=18.42 Aligned_cols=24 Identities=17% Similarity=0.135 Sum_probs=19.6
Q ss_pred ccchHHHHHHHhhcCCCCCcHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIVML 96 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~L 96 (150)
.+.++-+.++|+-||++|+++..-
T Consensus 51 ~~~~~~~~~ia~~l~v~~~~l~~~ 74 (80)
T 3kz3_A 51 ALNAYNAALLAKILKVSVEEFSPS 74 (80)
T ss_dssp CCCHHHHHHHHHHHTSCGGGTCHH
T ss_pred CCCHHHHHHHHHHhCCCHHHHhHH
Confidence 466788999999999999876543
No 402
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=25.52 E-value=2.4e+02 Score=24.98 Aligned_cols=67 Identities=7% Similarity=0.087 Sum_probs=44.9
Q ss_pred CCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH
Q 031969 54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120 (150)
Q Consensus 54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 120 (150)
.+...+..+|..|-...+..|+.+-...++..+.-+......+.-|+..=...-|.||+++|...+.
T Consensus 758 ~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~aF~~~~d~~G~Is~~El~~~l~ 824 (863)
T 1sjj_A 758 MGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDELRRELP 824 (863)
T ss_dssp CCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHHHHHGGGTSSSEEEHHHHHHHSC
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCcCcHHHHHHHCC
Confidence 3467889999998543346899999998887764332222333334432245569999999999874
No 403
>3h6n_A Plexin-D1; structural genomics consortium, SGC, membrane, transmembrane, receptor, alternative splicing, cell membrane, glycoprotein, polymorphism; 2.00A {Homo sapiens}
Probab=25.35 E-value=30 Score=24.62 Aligned_cols=16 Identities=25% Similarity=0.576 Sum_probs=13.7
Q ss_pred HHcCCCCHHHHHHHHH
Q 031969 120 QSLGIDSLDKFRERIS 135 (150)
Q Consensus 120 ~~l~~dsi~~lk~~l~ 135 (150)
+-|.||||.+.|++|-
T Consensus 22 kVLdCDTItQvKeKiL 37 (127)
T 3h6n_A 22 RAMDTDTLTQVKEKIL 37 (127)
T ss_dssp EEETTSBHHHHHHHHH
T ss_pred eeeccCchhhhhHHHH
Confidence 3579999999999974
No 404
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=25.22 E-value=53 Score=23.05 Aligned_cols=35 Identities=14% Similarity=0.063 Sum_probs=25.9
Q ss_pred ccchHHHHHHHhhcCCCCCcHH-------HHHHHHhhccccc
Q 031969 73 MILVDGITLLCNDLQVDPQDIV-------MLVVSWHMKAATM 107 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~-------~LvLa~~l~a~~~ 107 (150)
+=+++.....|+.||++|++.. =+.-|...|..+.
T Consensus 140 KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i 181 (216)
T 3kbb_A 140 KPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERI 181 (216)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCE
T ss_pred cccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEE
Confidence 4567889999999999997644 3455667776664
No 405
>2nr3_A Hypothetical protein; APC84902, conserved domain, pseudomonas syringae PV. tomato STR. DC3000, structural genomics, PSI-2; 2.21A {Pseudomonas syringae PV} PDB: 3bz6_A
Probab=25.17 E-value=17 Score=27.54 Aligned_cols=55 Identities=9% Similarity=0.168 Sum_probs=44.6
Q ss_pred HHHhhcCCCCCcHHHHHHHHhhccccccccc-HHHHHHHhHHcCCCCHHHHHHHHHHHHHH
Q 031969 81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFS-KQEFIGGLQSLGIDSLDKFRERISFMRAE 140 (150)
Q Consensus 81 ~~~edLgv~ped~~~LvLa~~l~a~~~g~~t-r~eF~~g~~~l~~dsi~~lk~~l~~l~~~ 140 (150)
+||..|++++..+.+|++..+=|+.+.|++- |.+=+ ...++++.....|..|...
T Consensus 99 r~~~~l~l~~~e~All~~LlLRGpQT~gELRtRs~Rl-----~~F~d~~~Ve~~L~~L~~r 154 (183)
T 2nr3_A 99 KVDKGLELVPAQVILTGLLLLRGPQTVSELLTRSNRM-----HDFEDSEQVVHQLERLIAR 154 (183)
T ss_dssp CHHHHHTCCHHHHHHHHHHHHHCSEEHHHHHHHTTTT-----SCCSSHHHHHHHHHHHHHT
T ss_pred hhhhhcCCCHHHHHHHHHHHhcCCCChHHHHHhhhcC-----CcCCCHHHHHHHHHHHhhC
Confidence 6789999999999999999999999988863 44322 2568899999999888754
No 406
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=25.16 E-value=40 Score=19.62 Aligned_cols=21 Identities=19% Similarity=0.245 Sum_probs=17.9
Q ss_pred ccchHHHHHHHhhcCCCCCcH
Q 031969 73 MILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~ 93 (150)
.+..+-+.++|+-||++|+++
T Consensus 49 ~~~~~~l~~la~~l~v~~~~l 69 (71)
T 2ewt_A 49 AVTVQRLAELADFYGVPVQEL 69 (71)
T ss_dssp CCCHHHHHHHHHHHTSCGGGG
T ss_pred CCCHHHHHHHHHHHCcCHHHH
Confidence 467788999999999999865
No 407
>2k4j_A Putative transcriptional regulator; response regulator, acid resistance, DN binding, phosphoprotein, transcription regul; NMR {Helicobacter pylori}
Probab=25.05 E-value=1e+02 Score=20.44 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=37.4
Q ss_pred CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC-CCCHHHHHHHHHHHHHHcC
Q 031969 88 VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-IDSLDKFRERISFMRAELK 142 (150)
Q Consensus 88 v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~-~dsi~~lk~~l~~l~~~l~ 142 (150)
|.+..-..-+|+.++..+. -.+||++.++-.-.-. ..+-..+..+|..||+.|.
T Consensus 40 i~Lt~~E~~LL~~L~~~~g-~vvsre~L~~~vW~~~~~~~~~tl~~~I~rLRkkL~ 94 (115)
T 2k4j_A 40 LDLTRAEYEILSLLISKKG-YVFSRESIAIESESINPESSNKSIDVIIGRLRSKIE 94 (115)
T ss_dssp ECSCHHHHHHHHHHHHHCC-CEECHHHHHHHTCCSSCTTCHHHHHHHHHHHHHHHH
T ss_pred EecCHHHHHHHHHHHHcCC-cEEcHHHHHHHHcCCCCCCchhHHHHHHHHHHHHhh
Confidence 4444455566666666553 3799999998643222 3467899999999999994
No 408
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=24.83 E-value=59 Score=19.17 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=17.1
Q ss_pred ccchHHHHHHHhhcCCCCCcH
Q 031969 73 MILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~ 93 (150)
.+..+-+.++|+-||++|+++
T Consensus 47 ~~~~~~l~~ia~~l~~~~~~l 67 (78)
T 3b7h_A 47 RPTITTIRKVCGTLGISVHDF 67 (78)
T ss_dssp CCCHHHHHHHHHHHTCCHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHH
Confidence 467788999999999998654
No 409
>2r2o_A Plexin-B1; effector domain, structural genomics, structural GEN consortium, SGC, glycoprotein, membrane, phosphorylation, R secreted, transmembrane; 2.00A {Homo sapiens} PDB: 2rex_A* 2jph_A
Probab=24.63 E-value=37 Score=24.48 Aligned_cols=18 Identities=17% Similarity=0.351 Sum_probs=14.9
Q ss_pred hHHcCCCCHHHHHHHHHH
Q 031969 119 LQSLGIDSLDKFRERISF 136 (150)
Q Consensus 119 ~~~l~~dsi~~lk~~l~~ 136 (150)
.+-|.||||.+.|++|-+
T Consensus 45 VkVLdCDTItQvKeKiLD 62 (138)
T 2r2o_A 45 VKVLDCDTISQAKEKMLD 62 (138)
T ss_dssp EEEETTCBHHHHHHHHHH
T ss_pred EEEeccccHHHHHHHHHH
Confidence 456899999999999743
No 410
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=24.33 E-value=67 Score=22.70 Aligned_cols=63 Identities=11% Similarity=0.090 Sum_probs=38.6
Q ss_pred cchHHHHHHHhhcCCCCCcHHH-------HHHHHhhcccccccccHHHHH---------HHhHHcCCCCHHHHHHHHHH
Q 031969 74 ILVDGITLLCNDLQVDPQDIVM-------LVVSWHMKAATMCEFSKQEFI---------GGLQSLGIDSLDKFRERISF 136 (150)
Q Consensus 74 I~~dG~~~~~edLgv~ped~~~-------LvLa~~l~a~~~g~~tr~eF~---------~g~~~l~~dsi~~lk~~l~~ 136 (150)
=.++++.+.|+.||++|+++.+ +..|...|......=...+|- ..--..-++|+..+...|..
T Consensus 170 p~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 170 PDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp TSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 3478999999999999987653 666777777654332111111 01111235788888777654
No 411
>2krk_A 26S protease regulatory subunit 8; structural genomics, northeast structural genomics consortium (NESG), target HR3102A, PSI-2; NMR {Homo sapiens}
Probab=24.32 E-value=1.4e+02 Score=18.93 Aligned_cols=69 Identities=10% Similarity=0.031 Sum_probs=49.9
Q ss_pred CcCCHHHHHHHHHHhcCCCC--CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccc--cccccHHHHHHHhHHc
Q 031969 52 SLTDTRHLEELYNRYKDPYL--DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAAT--MCEFSKQEFIGGLQSL 122 (150)
Q Consensus 52 ~~~~~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~--~g~~tr~eF~~g~~~l 122 (150)
+.++...-.++|..|-..-+ +.++.+-+.+.++ |++-.|+..||---.+.|-. ...||.+.|...+...
T Consensus 9 ~~Pd~~~R~~IL~~~l~~~~l~~dvdl~~LA~~T~--G~SGADL~~l~~eAa~~alr~~~~~I~~~df~~Al~~v 81 (86)
T 2krk_A 9 SHPNEEARLDILKIHSRKMNLTRGINLRKIAELMP--GASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 81 (86)
T ss_dssp CCCCHHHHHHHHHHHTTTSEECTTCCCHHHHHTCS--SCCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHcCCCCCcccCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 44577788888888875422 3577777777665 99999999888666555543 3578999999887764
No 412
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=24.31 E-value=70 Score=23.95 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~ 93 (150)
.+-+.+||..|=....+.-+.+-+..+++++|++++.+
T Consensus 115 ~~~~~al~~A~~~~g~di~d~~~L~~~a~~~GLd~~~~ 152 (234)
T 3rpp_A 115 EKASRELWMRVWSRNEDITEPQSILAAAEKAGMSAEQA 152 (234)
T ss_dssp HHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcCCCHHHH
Confidence 45677788887664446678899999999999998544
No 413
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=24.25 E-value=62 Score=23.52 Aligned_cols=43 Identities=21% Similarity=0.227 Sum_probs=34.8
Q ss_pred HHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHHHHHHc
Q 031969 98 VSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAEL 141 (150)
Q Consensus 98 La~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~l 141 (150)
|.-.|||.-.|. .+++|+.-++.|.-++-..+...|+++-+.-
T Consensus 117 l~LiLg~AV~c~-~ke~~I~~I~~L~~~~Q~~im~~Iqev~~~~ 159 (164)
T 1wix_A 117 LQLILGCAVNCE-KKQEHIKNIMTLEESVQHVVMTAIQELMSKS 159 (164)
T ss_dssp HHHHHHHTTSSS-THHHHHHHHHHSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCC-chHHHHHHHHcCCHHHHHHHHHHHHHHHccc
Confidence 344677777777 8999999999998888888888888886653
No 414
>2kvv_A Putative excisionase; DNA binding, WHTH motif, structural genomics, N structural genomics consortium (NESG), PSI-2; NMR {Klebsiella pneumoniae}
Probab=24.24 E-value=64 Score=20.99 Aligned_cols=24 Identities=13% Similarity=0.214 Sum_probs=20.4
Q ss_pred HHHHHHHhCCCHHHHHHHHHhCCCC
Q 031969 12 LQQFVSITGASEKAALQALKASDWH 36 (150)
Q Consensus 12 i~~F~~iT~~~~~~A~~~L~~~~w~ 36 (150)
...++++||.++.+.++|-+ ..|-
T Consensus 13 e~~l~a~tGLs~~tIkryR~-~~Wl 36 (78)
T 2kvv_A 13 EKALMVRTGLGARQIESYRQ-GAWI 36 (78)
T ss_dssp HHHHHHHHCCCHHHHHHHHT-TTCC
T ss_pred HHHHHHHHCCCHHHHHHHHh-chhh
Confidence 36789999999999999985 7783
No 415
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=24.16 E-value=92 Score=20.34 Aligned_cols=53 Identities=9% Similarity=0.166 Sum_probs=31.1
Q ss_pred HHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHHHHHH
Q 031969 79 ITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAE 140 (150)
Q Consensus 79 ~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~ 140 (150)
+.+.+.+.|+++.+..+|...+.-+. +|-.+-. ..+++ +...+...|..|++.
T Consensus 23 ~~~~~~~~~lt~~~~~iL~~l~~~~~-----~~~~~la---~~l~~-~~~tvs~~l~~L~~~ 75 (138)
T 1jgs_A 23 LNEYLSPLDITAAQFKVLCSIRCAAC-----ITPVELK---KVLSV-DLGALTRMLDRLVCK 75 (138)
T ss_dssp HHHHHTTTTSCHHHHHHHHHHHHHSS-----BCHHHHH---HHHTC-CHHHHHHHHHHHHHT
T ss_pred HHHHhhhcCCCHHHHHHHHHHHhcCC-----CCHHHHH---HHHCC-ChHHHHHHHHHHHHC
Confidence 34456678888877777666655333 3333333 23444 566677777777665
No 416
>3bs3_A Putative DNA-binding protein; XRE-family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.65A {Bacteroides fragilis}
Probab=23.98 E-value=91 Score=18.14 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.4
Q ss_pred ccchHHHHHHHhhcCCCCCcH
Q 031969 73 MILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~ 93 (150)
.+..+-+.++|+-||++|+++
T Consensus 49 ~~~~~~l~~ia~~l~~~~~~l 69 (76)
T 3bs3_A 49 QPSLDMLVKVAELLNVDPRQL 69 (76)
T ss_dssp CCCHHHHHHHHHHHTSCGGGG
T ss_pred CCCHHHHHHHHHHHCcCHHHH
Confidence 466788999999999998865
No 417
>3op9_A PLI0006 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, transcription regulat; HET: MSE; 1.90A {Listeria innocua}
Probab=23.84 E-value=62 Score=20.98 Aligned_cols=60 Identities=7% Similarity=0.118 Sum_probs=36.2
Q ss_pred ccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccc----cccccHHHHHHHhHHcCCCCHHHHHHHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAAT----MCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAE 140 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~----~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~ 140 (150)
.+.++-+.++|+-|||+++.+ ++-.. ........++.-+..+.-..++.++..+..+++-
T Consensus 48 ~p~~~~l~~la~~l~v~~~~l--------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~i~~i~~~ 111 (114)
T 3op9_A 48 KPDIEKLIRLATYFHLSIDEL--------VGYVQEDKVWNDLSLKQWLLSLNLRSEEEIAKIKILVDTVETL 111 (114)
T ss_dssp CCCHHHHHHHHHHHTCCHHHH--------HTCCCC--CCSCHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHH--------hcCCCcccccCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 467788999999999998643 33222 1222345555555554444566666666666543
No 418
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=23.82 E-value=1.3e+02 Score=18.20 Aligned_cols=70 Identities=13% Similarity=0.189 Sum_probs=41.8
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~ 136 (150)
..+.+++...-+-+++.|+++-. |.+|||++ ++..+-|...+.-.---.|+-+++. ++.|+.++-.+|..
T Consensus 8 ~~l~~ii~~~l~~~~~~i~~d~~--l~~dlg~D--Sl~~vel~~~le~~fgi~i~~~~~~------~~~Tv~~l~~~i~~ 77 (81)
T 3gzm_A 8 DDIKKIISKQLSVEEDKIQMNSN--FTKDLGAD--SLDLVELIMALEEKFNVTISDQDAL------KINTVQDAIDYIEK 77 (81)
T ss_dssp HHHHHHHHHHHTCCGGGCCTTCB--HHHHSCCC--HHHHHHHHHHHHHHHTCCCCHHHHH------TCCBHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCHHHCCCCCc--chhhcCCC--HHHHHHHHHHHHHHHCCCcCHHHHH------HcCCHHHHHHHHHH
Confidence 44555666555444456776643 66899985 4444444444443322346666542 57889998888754
No 419
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=23.54 E-value=46 Score=24.17 Aligned_cols=38 Identities=16% Similarity=0.370 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcH
Q 031969 56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~ 93 (150)
..-+..||..|=....+.-+.+-+..+++.+|++++.+
T Consensus 109 ~~~~~alf~a~~~~g~~i~~~~~L~~~a~~~Gld~~~~ 146 (202)
T 3fz5_A 109 TAFAQRVFDLYFSDRLDTASPEAVSRLGPEVGLEPEAL 146 (202)
T ss_dssp HHHHHHHHHHHTTTCCCTTCHHHHHTTHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHH
Confidence 34567788887654345567889999999999997754
No 420
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=23.53 E-value=82 Score=19.07 Aligned_cols=37 Identities=32% Similarity=0.460 Sum_probs=27.4
Q ss_pred cchHHHHHHHHHHhCCCHHHHHHHHHhCCC-Cchhhhhh
Q 031969 6 RSNRDKLQQFVSITGASEKAALQALKASDW-HLEGAFDV 43 (150)
Q Consensus 6 ~~~~~~i~~F~~iT~~~~~~A~~~L~~~~w-~le~Ai~~ 43 (150)
...++.+.+.++ .|.+++.|...|++.+- .|+.|++-
T Consensus 7 ~vn~qmlq~L~e-MGFd~erae~Alk~Tg~~Gle~Amew 44 (54)
T 2cos_A 7 GVNRQMLQELVN-AGCDQEMAGRALKQTGSRSIEAALEY 44 (54)
T ss_dssp SCCHHHHHHHHH-HHCCHHHHHHHHHHHTSCCHHHHHHH
T ss_pred hhHHHHHHHHHH-cCCCHHHHHHHHHHhCcccHHHHHHH
Confidence 445667777776 58999999999998774 47777763
No 421
>2pmu_A Response regulator PHOP; winged helix-TUN-HELX, transcription regulation; 1.78A {Mycobacterium tuberculosis}
Probab=23.50 E-value=93 Score=20.31 Aligned_cols=55 Identities=11% Similarity=0.163 Sum_probs=36.8
Q ss_pred CCCCcHHHHHHHHhhcccccccccHHHHHHHh-HHcCCCCHHHHHHHHHHHHHHcCC
Q 031969 88 VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL-QSLGIDSLDKFRERISFMRAELKD 143 (150)
Q Consensus 88 v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~-~~l~~dsi~~lk~~l~~l~~~l~~ 143 (150)
|.+..-..-+|+.++..+. -.+||++.++-. ..-...+-..+..+|..||+.|.+
T Consensus 33 i~Lt~~E~~lL~~L~~~~g-~~vsr~~L~~~vW~~~~~~~~~~l~~~I~rLRkkL~~ 88 (110)
T 2pmu_A 33 VSLSPTEFTLLRYFVINAG-TVLSKPKILDHVWRYDFGGDVNVVESYVSYLRRKIDT 88 (110)
T ss_dssp ECCCHHHHHHHHHHHHTTT-SCBCHHHHHHHHSCTTCCSSSCHHHHHHHHHHHHHCC
T ss_pred EecCHHHHHHHHHHHHCCC-EEEcHHHHHHHHcCCCCCCccchHHHHHHHHHHHhcc
Confidence 3444445556666665543 369999998864 332223567899999999999964
No 422
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=23.18 E-value=1e+02 Score=21.06 Aligned_cols=20 Identities=20% Similarity=-0.026 Sum_probs=13.8
Q ss_pred cchHHHHHHHhhcCCCCCcH
Q 031969 74 ILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 74 I~~dG~~~~~edLgv~ped~ 93 (150)
-.++.+.+.++.+|++|+++
T Consensus 142 p~~~~~~~~~~~~~~~~~~~ 161 (200)
T 3cnh_A 142 PNPAMYRLGLTLAQVRPEEA 161 (200)
T ss_dssp TCHHHHHHHHHHHTCCGGGE
T ss_pred CCHHHHHHHHHHcCCCHHHe
Confidence 34667777778888777653
No 423
>3q9v_A DNA-binding response regulator; response regulator protein, DNA binding protein; 1.60A {Deinococcus radiodurans}
Probab=23.18 E-value=1.3e+02 Score=20.56 Aligned_cols=68 Identities=10% Similarity=0.060 Sum_probs=43.1
Q ss_pred cchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHH-hHHcCCCCHHHHHHHHHHHHHHcC
Q 031969 74 ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG-LQSLGIDSLDKFRERISFMRAELK 142 (150)
Q Consensus 74 I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g-~~~l~~dsi~~lk~~l~~l~~~l~ 142 (150)
|+++.-.-++.+--|.+..-..-+|+.++..+.. .+||++.++. |..-...+-..+..+|..||+.|.
T Consensus 45 ld~~~~~v~~~g~~i~Lt~~E~~LL~~L~~~~g~-vvsre~L~~~vW~~~~~~~~~~l~~~I~rLRkkL~ 113 (133)
T 3q9v_A 45 LDPQKRLVTYKGEELRLSPKEFDILALLIRQPGR-VYSRQEIGQEIWQGRLPEGSNVVDVHMANLRAKLR 113 (133)
T ss_dssp EETTTTEEEETTEECCCCHHHHHHHHHHTTSTTC-EEEHHHHHHHHHTTCCCTTCCHHHHHHHHHHHHHH
T ss_pred EECCCCEEEECCEEEEcCHHHHHHHHHHHHCCCc-eEcHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 3333333344445566665666777777765533 6999999876 443222344678889999999884
No 424
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=22.94 E-value=29 Score=27.99 Aligned_cols=82 Identities=21% Similarity=0.210 Sum_probs=53.6
Q ss_pred HHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCC----ccchHHHHHHHhhcCCC------C---
Q 031969 24 KAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLD----MILVDGITLLCNDLQVD------P--- 90 (150)
Q Consensus 24 ~~A~~~L~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d----~I~~dG~~~~~edLgv~------p--- 90 (150)
..|.+.|++.++++... ...+....--+..+..++..|=+-++||+-+ .+|-.|..++++.|..+ |
T Consensus 35 ~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga~rlLp~LD~~~i~~a~PK~~ 113 (311)
T 1zl0_A 35 EATLRQLEVHGVDYHLG-RHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCGQLLPGLDWGRLQAASPRPL 113 (311)
T ss_dssp HHHHHHHHHTTCCEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCGGGGTTTCCHHHHHHSCCCCE
T ss_pred HHHHHHHHhCCCEEEEC-ccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCHHHHhhccchhhhhccCCCEE
Confidence 57889999988888654 2222322223556788888888888997633 57888888888876553 2
Q ss_pred ---CcHHHHHHHHhh-cccc
Q 031969 91 ---QDIVMLVVSWHM-KAAT 106 (150)
Q Consensus 91 ---ed~~~LvLa~~l-~a~~ 106 (150)
+|+..|-+|-.- |..+
T Consensus 114 iGySDiTaL~~al~~~G~~t 133 (311)
T 1zl0_A 114 IGFSDISVLLSAFHRHGLPA 133 (311)
T ss_dssp EECGGGHHHHHHHHHTTCCE
T ss_pred EEEchhHHHHHHHHHcCCcE
Confidence 466666555432 4444
No 425
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=22.19 E-value=47 Score=23.86 Aligned_cols=39 Identities=13% Similarity=0.088 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHhcCCCC--CccchHHHHHHHhhcCC-CCCcH
Q 031969 55 DTRHLEELYNRYKDPYL--DMILVDGITLLCNDLQV-DPQDI 93 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~--d~I~~dG~~~~~edLgv-~ped~ 93 (150)
..+-...||+.|..... +.-+.+-+.+++..+|+ +++.+
T Consensus 85 ~~~~~~~lf~a~~~~~~~~~~~~~~~L~~~a~~~Gl~d~~~~ 126 (185)
T 3feu_A 85 DHAFMEDLFAATQMGEGTTLTEQQEAYSKAFTSRGLVSPYDF 126 (185)
T ss_dssp CHHHHHHHHHHHTCCTTSCHHHHHHHHHHHHHTTTCCCGGGC
T ss_pred HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCCCHHHH
Confidence 35667889999876433 34578899999999998 88754
No 426
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=22.14 E-value=2.1e+02 Score=20.20 Aligned_cols=85 Identities=18% Similarity=0.208 Sum_probs=51.6
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHH--HHHHHHhhcccc----------------------cccccH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV--MLVVSWHMKAAT----------------------MCEFSK 112 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~--~LvLa~~l~a~~----------------------~g~~tr 112 (150)
..++++-++=-++....-+.++++.+|+-+.-+++.+. +-.|..+++.++ .-+|..
T Consensus 10 ~~~~~~IekATs~~l~~~dw~~ileicD~I~~~~~~pk~a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias 89 (149)
T 3g2s_A 10 ETLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGK 89 (149)
T ss_dssp CCHHHHHHHHSCTTCSSCCHHHHHHHHHHGGGSSSHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTS
T ss_pred CcHHHHHHHHcCCCCCCcCHHHHHHHHHHHHCCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 44566666655654455678888888888888876554 223333333221 256888
Q ss_pred HHHHHHhHHcCC------CCHHHHHHHHHHHHHHc
Q 031969 113 QEFIGGLQSLGI------DSLDKFRERISFMRAEL 141 (150)
Q Consensus 113 ~eF~~g~~~l~~------dsi~~lk~~l~~l~~~l 141 (150)
.+|++.+.++=- .+-...|.++-+|.+..
T Consensus 90 ~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W 124 (149)
T 3g2s_A 90 FRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW 124 (149)
T ss_dssp HHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHH
Confidence 899999887522 24456666655554443
No 427
>1aor_A Aldehyde ferredoxin oxidoreductase; HET: PTE; 2.30A {Pyrococcus furiosus} SCOP: a.110.1.1 d.152.1.1
Probab=21.71 E-value=71 Score=28.10 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=38.3
Q ss_pred HHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhH-HcCCCCHHHHHHHHHHH
Q 031969 78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ-SLGIDSLDKFRERISFM 137 (150)
Q Consensus 78 G~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~-~l~~dsi~~lk~~l~~l 137 (150)
-+..+|.++|+|.-+.- -+|||.+.+-..|.++.++. |.. .+.-.+.+.+.+.|..+
T Consensus 332 ~~~~lcd~~GlDtIs~G-~~ia~amE~~e~G~l~~ee~--~~~~~l~~Gd~~~~~~ll~~i 389 (605)
T 1aor_A 332 EANHMCDELGLDTISTG-GTLATAMELYEKGHIKDEEL--GDAPPFRWGNTEVLHYYIEKI 389 (605)
T ss_dssp HHHHHHHHHTBCHHHHH-HHHHHHHHHHHTTSSCHHHH--TTSCCCCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHhCccHHHHH-HHHHHHHHHHHCCCCCHHHc--CcccCCCCCCHHHHHHHHHHH
Confidence 45688999999975433 57899999999999998886 310 01223555555555443
No 428
>1hyw_A GPW, head-TO-tail joining protein W; novel fold, two helices, one two-stranded beta-sheet, viral protein; NMR {Enterobacteria phage lambda} SCOP: d.186.1.1 PDB: 2l6q_A 2l6r_A
Probab=21.69 E-value=80 Score=19.82 Aligned_cols=20 Identities=10% Similarity=0.185 Sum_probs=17.5
Q ss_pred CCCCHHHHHHHHHHHHHHcC
Q 031969 123 GIDSLDKFRERISFMRAELK 142 (150)
Q Consensus 123 ~~dsi~~lk~~l~~l~~~l~ 142 (150)
+-.|+.+|+.+|.+|+.+|.
T Consensus 36 ~~asi~~L~~~I~~le~~Lg 55 (68)
T 1hyw_A 36 TATSVSDLKKYIAELEVQTG 55 (68)
T ss_dssp CTTTHHHHHHHHHHHHHHTT
T ss_pred ecCCHHHHHHHHHHHHHHhc
Confidence 44699999999999999983
No 429
>1opc_A OMPR, OMPRC; transcription regulation, response regulator, winged helix, osmoregulation; 1.95A {Escherichia coli} SCOP: a.4.6.1 PDB: 1odd_A 2jpb_A
Probab=21.57 E-value=73 Score=20.69 Aligned_cols=55 Identities=9% Similarity=0.033 Sum_probs=36.5
Q ss_pred CCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcC-CCCHHHHHHHHHHHHHHcCC
Q 031969 88 VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG-IDSLDKFRERISFMRAELKD 143 (150)
Q Consensus 88 v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~-~dsi~~lk~~l~~l~~~l~~ 143 (150)
|.+..-..-+|..++..+. -.+||++.++-.-.-. ..+-..++.+|..||+.|.+
T Consensus 30 i~Lt~~E~~lL~~L~~~~g-~~vsr~~L~~~vW~~~~~~~~~~l~~~I~rLRkkL~~ 85 (110)
T 1opc_A 30 MPLTSGEFAVLKALVSHPR-EPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEE 85 (110)
T ss_dssp ECCCHHHHHHHHHHHHSTT-CCEEHHHHHHHHCCSSSCTTSSCHHHHHHHHHHHHCS
T ss_pred EEcCHHHHHHHHHHHHcCC-ceEcHHHHHHHHcCCCCCCCcchHHHHHHHHHHHhhc
Confidence 3444455566666665553 3699999998643222 23456788999999999954
No 430
>1rxw_A Flap structure-specific endonuclease; helical clamp, helix-3 turn-helix, hydrophobic wedge, 3' FLA site, hydrolase-DNA complex; 2.00A {Archaeoglobus fulgidus} SCOP: a.60.7.1 c.120.1.2 PDB: 1rxv_A
Probab=21.52 E-value=1.3e+02 Score=24.03 Aligned_cols=69 Identities=9% Similarity=0.047 Sum_probs=43.4
Q ss_pred CCCHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCC-----CccchHHHHHHH-hhcCCCCCcH
Q 031969 20 GASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYL-----DMILVDGITLLC-NDLQVDPQDI 93 (150)
Q Consensus 20 ~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~-----d~I~~dG~~~~~-edLgv~ped~ 93 (150)
|+-+++|.++|++++ +++..++..=++-. +..+|..+|..-.-++. ...+.+++..|+ +.+|.+.+-+
T Consensus 242 GiG~KtA~kLl~~~g-sle~i~~~~~~~l~-----~~~~l~~i~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~f~~~rv 315 (336)
T 1rxw_A 242 GVGVKKALNYIKTYG-DIFRALKALKVNID-----HVEEIRNFFLNPPVTDDYRIEFREPDFEKAIEFLCEEHDFSRERV 315 (336)
T ss_dssp TCCHHHHHHHHHHHS-SHHHHHHHHTC---------CHHHHHHHHSCCCCCCCCCCCCCCCHHHHHHHHTTTTCCCHHHH
T ss_pred CcCHHHHHHHHHHcC-CHHHHHHhCCCCCc-----cHHHHHHHHhCCCCCCcccccCCCCCHHHHHHHHHHccCCCHHHH
Confidence 456899999999997 67665555311100 12366677654331111 247889999998 9999988744
Q ss_pred H
Q 031969 94 V 94 (150)
Q Consensus 94 ~ 94 (150)
.
T Consensus 316 ~ 316 (336)
T 1rxw_A 316 E 316 (336)
T ss_dssp H
T ss_pred H
Confidence 3
No 431
>3geh_A MNME, tRNA modification GTPase MNME; G protein, U34, GTP-binding, HYDR magnesium, metal-binding, nucleotide-binding, potassium, TR processing; HET: GDP FON; 3.20A {Nostoc SP}
Probab=21.50 E-value=63 Score=27.19 Aligned_cols=14 Identities=36% Similarity=0.627 Sum_probs=12.3
Q ss_pred cccccccHHHHHHH
Q 031969 105 ATMCEFSKQEFIGG 118 (150)
Q Consensus 105 ~~~g~~tr~eF~~g 118 (150)
...|+|||--|++|
T Consensus 115 A~pGEFt~RAflng 128 (462)
T 3geh_A 115 AQPGEFTLRAFLNG 128 (462)
T ss_dssp CCTTHHHHHHHHTT
T ss_pred cCCchhhhhHHhcC
Confidence 35699999999999
No 432
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=21.26 E-value=1.2e+02 Score=20.80 Aligned_cols=63 Identities=8% Similarity=0.170 Sum_probs=38.5
Q ss_pred ccchHHHHHHHhhcCCCCCcHH--------------HHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIV--------------MLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMR 138 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~--------------~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~ 138 (150)
.++.+.+.++++.+|++++.+. ..-++..+|....=.| +++|-.--|..+.+.|++.|....
T Consensus 97 ~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~----~i~g~~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 97 KANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSF----VVEDALVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp CCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEE----EETTEEECSCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEE----EECCEEeeCCCCHHHHHHHHHHHH
Confidence 4688999999999999976542 2234444443221111 123322236778999999887765
Q ss_pred H
Q 031969 139 A 139 (150)
Q Consensus 139 ~ 139 (150)
.
T Consensus 173 ~ 173 (175)
T 3gyk_A 173 K 173 (175)
T ss_dssp H
T ss_pred h
Confidence 4
No 433
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=21.00 E-value=93 Score=17.53 Aligned_cols=21 Identities=19% Similarity=0.205 Sum_probs=16.7
Q ss_pred ccchHHHHHHHhhcCCCCCcH
Q 031969 73 MILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~ 93 (150)
.+..+-+.++|+-||++|+.+
T Consensus 44 ~~~~~~l~~i~~~l~~~~~~l 64 (68)
T 2r1j_L 44 EPNGENLLALSKALQCSPDYL 64 (68)
T ss_dssp CCBHHHHHHHHHHTTSCHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHH
Confidence 356778899999999988754
No 434
>3fbl_A Putative uncharacterized protein; AFV1, archaeal virus, extremophiles, lipothrixviridae, structural protein, DNA-binding protein; 1.95A {Acidianus filamentous virus 1}
Probab=20.98 E-value=72 Score=20.15 Aligned_cols=20 Identities=30% Similarity=0.433 Sum_probs=16.7
Q ss_pred HHHHHHHHHhCCCHHHHHHH
Q 031969 10 DKLQQFVSITGASEKAALQA 29 (150)
Q Consensus 10 ~~i~~F~~iT~~~~~~A~~~ 29 (150)
.+|..|.+-||.+.++|+..
T Consensus 55 naisafssrtgisqetaqki 74 (82)
T 3fbl_A 55 NAISAFSSRTGISQETAQKI 74 (82)
T ss_dssp HHHHHHHTSTTCCHHHHHHH
T ss_pred HHHHHHhhcccccHHHHHHH
Confidence 45788999999999988765
No 435
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=20.65 E-value=76 Score=19.05 Aligned_cols=28 Identities=11% Similarity=0.239 Sum_probs=22.1
Q ss_pred ccchHHHHHHHhhcCCCCCcHHHHHHHH
Q 031969 73 MILVDGITLLCNDLQVDPQDIVMLVVSW 100 (150)
Q Consensus 73 ~I~~dG~~~~~edLgv~ped~~~LvLa~ 100 (150)
.+.++-+.++|.-||++|+++.......
T Consensus 50 ~~~~~~l~~ia~~l~v~~~~l~~~~~~~ 77 (82)
T 3s8q_A 50 NLTIKSLELIMKGLEVSDVVFFEMLIKE 77 (82)
T ss_dssp CCBHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCcCHHHHhcCChHh
Confidence 5778899999999999998776554443
No 436
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=20.44 E-value=76 Score=22.19 Aligned_cols=37 Identities=11% Similarity=0.228 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCCC---CccchHHHHHHHhhcCCCCCcH
Q 031969 57 RHLEELYNRYKDPYL---DMILVDGITLLCNDLQVDPQDI 93 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~---d~I~~dG~~~~~edLgv~ped~ 93 (150)
+-...+|+.+-.... +.-+.+.+.++++.+|++++.+
T Consensus 89 ~~~~~lf~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~ 128 (193)
T 2rem_A 89 RSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRF 128 (193)
T ss_dssp HHHHHHHHHHHTTCCSCSTTCCHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHhcccCcCCCCHHHHHHHHHHcCCCHHHH
Confidence 445678888765332 4567889999999999998643
No 437
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=20.38 E-value=1.5e+02 Score=21.25 Aligned_cols=92 Identities=13% Similarity=0.124 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCHHHHHHHHHhCCCCchhhhhhhhccCCCCCcCCHHHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCC
Q 031969 11 KLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP 90 (150)
Q Consensus 11 ~i~~F~~iT~~~~~~A~~~L~~~~w~le~Ai~~f~~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~p 90 (150)
.+..+-.+- +++-++.-++..+.|++.- ..-..+-.+|+...+.. .--.|-+...+-.||-.|
T Consensus 30 vi~~LN~~L-a~~~~~~~~~~~~hw~v~G--------------~~f~~lh~~~ee~~~e~--~~haD~laERI~~LGg~P 92 (182)
T 1tjo_A 30 CVDALNADL-ANVYVLYHQLKKHHWNVEG--------------AEFRDLHLFLGEAAETA--EEVADELAERVQALGGVP 92 (182)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHCCS--------------TTHHHHHHHHHHHHHHH--HHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhhhheeC--------------CCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCCCC
Confidence 344554444 7888899999999998632 12234445555544311 122456677777777777
Q ss_pred Cc-HHHHHHHHhhcccccccccHHHHHHHh
Q 031969 91 QD-IVMLVVSWHMKAATMCEFSKQEFIGGL 119 (150)
Q Consensus 91 ed-~~~LvLa~~l~a~~~g~~tr~eF~~g~ 119 (150)
.. +..+.=.-.+..+..|..+-.+-++..
T Consensus 93 ~~~~~~~~~~s~i~e~~~~~~~~~e~l~~~ 122 (182)
T 1tjo_A 93 HASPETLQAEASVDVEDEDVYDIRTSLAND 122 (182)
T ss_dssp CCSHHHHHHHCCSCCCCSSBCCHHHHHHHH
T ss_pred CCCHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence 53 222221122333344444544444443
No 438
>4dox_A Coat protein; all helix capsid protein, virus capsid structure, viral PROT; 2.70A {Papaya mosaic virus}
Probab=20.34 E-value=2.4e+02 Score=21.77 Aligned_cols=57 Identities=19% Similarity=0.232 Sum_probs=38.6
Q ss_pred hHHHHHHHhhcCCCCCcH--HHHHHHHhhc---cc---------ccccccHHHHHHHhHHcCCCCHHHHHHH
Q 031969 76 VDGITLLCNDLQVDPQDI--VMLVVSWHMK---AA---------TMCEFSKQEFIGGLQSLGIDSLDKFRER 133 (150)
Q Consensus 76 ~dG~~~~~edLgv~ped~--~~LvLa~~l~---a~---------~~g~~tr~eF~~g~~~l~~dsi~~lk~~ 133 (150)
+..|...++.|||.++.+ +.+-|++.+- +. .-|.|+|++...-++..|| ||.+.-.+
T Consensus 39 i~~I~~~l~~lGvp~~~v~~~~~~la~~Cad~gSS~~~~~~G~~~~~~i~~~~la~~ik~~~~-TLRqfCr~ 109 (226)
T 4dox_A 39 LKSVSTLMVAAKVPAASVTTVALELVNFCYDNGSSAYTTVTGPSSIPEISLAQLASIVKASGT-SLRKFCRY 109 (226)
T ss_dssp HHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHCCCTTCCCCSBCSSTTCBHHHHHHHHHHTTC-CHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCCCcccccCCcCCCCCccHHHHHHHHHHhCC-CHHHHHHH
Confidence 455666678899999874 3555555542 11 1367899999999998767 47666554
No 439
>2cxc_A NUSA; transcription termination, RNA binding protein, archaeal NUS domain, structural genomics, NPPSFA; 2.00A {Aeropyrum pernix} PDB: 2cy1_A
Probab=20.29 E-value=59 Score=23.34 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=19.2
Q ss_pred CCCcchHHHHHHHHHHhCCCHHH
Q 031969 3 KLSRSNRDKLQQFVSITGASEKA 25 (150)
Q Consensus 3 ~l~~~~~~~i~~F~~iT~~~~~~ 25 (150)
+|+.++...|..|.++||++...
T Consensus 6 ~l~~~~~r~i~lfe~~t~a~~~d 28 (144)
T 2cxc_A 6 RITLEELRYISVFHSITGVTAYR 28 (144)
T ss_dssp -CCHHHHHHHHHHHHHHSCCEEE
T ss_pred EeCHHHHHHHHHHHHHhCCCeee
Confidence 78899999999999999997543
No 440
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=20.17 E-value=99 Score=23.21 Aligned_cols=82 Identities=10% Similarity=0.140 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHhcCCCCCccc-hHHHHHHHhhcCCCCCcHHHHHHHHhhcc-cccccccHHHH---------------HH
Q 031969 55 DTRHLEELYNRYKDPYLDMIL-VDGITLLCNDLQVDPQDIVMLVVSWHMKA-ATMCEFSKQEF---------------IG 117 (150)
Q Consensus 55 ~~~~l~~lFd~Y~d~~~d~I~-~dG~~~~~edLgv~ped~~~LvLa~~l~a-~~~g~~tr~eF---------------~~ 117 (150)
..+-...||..|-....+.-+ .+-+..+++.+|++++.+.-. +.. +....--+... ++
T Consensus 116 ~~~~~~alf~a~~~~g~~i~d~~~~L~~~a~~~Gld~~~~~~~-----l~s~~~~~~~v~~~~~~a~~~Gv~GvPtfvv~ 190 (239)
T 3gl5_A 116 HEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAV-----LADPAAYADEVRADEREAAQLGATGVPFFVLD 190 (239)
T ss_dssp HHHHHHHHHHHHHTCSSCCSSCHHHHHHHHHHTTCCHHHHHHH-----HHCTTTTHHHHHHHHHHHHHTTCCSSSEEEET
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCHHHHHHH-----HcCcHhHHHHHHHHHHHHHHCCCCeeCeEEEC
Confidence 345678899988654334446 799999999999997644321 122 22111111111 12
Q ss_pred H-hHHcCCCCHHHHHHHHHHHHHHc
Q 031969 118 G-LQSLGIDSLDKFRERISFMRAEL 141 (150)
Q Consensus 118 g-~~~l~~dsi~~lk~~l~~l~~~l 141 (150)
| ..-.|..+.+.+.+.|..+..+-
T Consensus 191 g~~~v~Ga~~~e~~~~~i~~~~~~~ 215 (239)
T 3gl5_A 191 RAYGVSGAQPAEVFTQALTQAWGER 215 (239)
T ss_dssp TTEEEESSCCHHHHHHHHHHHHHTC
T ss_pred CcEeecCCCCHHHHHHHHHHHHhhc
Confidence 2 11125578899999988877653
No 441
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=20.08 E-value=1.9e+02 Score=18.78 Aligned_cols=75 Identities=11% Similarity=0.140 Sum_probs=43.9
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 031969 57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF 136 (150)
Q Consensus 57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~ 136 (150)
..+.++...+-+-+++.|+++- .| .|||+| ++..+-|.-.+.-.---.|+-+++ .++.|+.++-.+|..
T Consensus 20 ~~l~~ila~~l~v~~~~I~~d~--~L-~dLGlD--SL~~veL~~~LE~~fgi~i~~~~l------~~~~TV~~L~~~I~~ 88 (100)
T 1vku_A 20 AKFVEIASEKMGKDLETVDEEN--TF-KELGFD--SIDVIDLVMFFEDEFALRIEDEEI------SKIRKVKDLIDIVIK 88 (100)
T ss_dssp HHHHHHHHHTTCCCCCSCCTTS--BT-TTTTCC--HHHHHHHHHHHHHHHTCCCCHHHH------TTCCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHCCCCC--CH-HHcCCc--hHHHHHHHHHHHHHHCCCCCHHHH------HcCCCHHHHHHHHHH
Confidence 3455555554443345666665 34 888874 555555544444333234565553 368999999999977
Q ss_pred HHHHcC
Q 031969 137 MRAELK 142 (150)
Q Consensus 137 l~~~l~ 142 (150)
....-.
T Consensus 89 ~~~~~~ 94 (100)
T 1vku_A 89 KLEEID 94 (100)
T ss_dssp HHHHCC
T ss_pred Hhhhhc
Confidence 655443
No 442
>3aji_B S6C, proteasome (prosome, macropain) 26S subunit, ATPA; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dwz_B* 2dvw_B*
Probab=20.02 E-value=1.6e+02 Score=17.97 Aligned_cols=65 Identities=8% Similarity=0.050 Sum_probs=44.1
Q ss_pred HHHHHHHHhcCCCC--CccchHHHHHHHhhcCCCCCcHHHHHHHHhhcccc--cccccHHHHHHHhHHcCC
Q 031969 58 HLEELYNRYKDPYL--DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAAT--MCEFSKQEFIGGLQSLGI 124 (150)
Q Consensus 58 ~l~~lFd~Y~d~~~--d~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~--~g~~tr~eF~~g~~~l~~ 124 (150)
.-.++|..+-..-+ +.++.+-+.+-++ |++..|+..+|---.+.|-. ...+|.+.|...+..+.-
T Consensus 5 ~R~~Il~~~l~~~~~~~~vdl~~la~~t~--G~SGADi~~l~~eA~~~a~~~~~~~i~~~df~~Al~~~~p 73 (83)
T 3aji_B 5 QKRLIFSTITSKMNLSEEVDLEDYVARPD--KISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIK 73 (83)
T ss_dssp HHHHHHHHHHTTSCBCTTCCTHHHHTSSC--CCCHHHHHHHHHHHHHGGGTSCCSSBCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCCCCcccCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHhccCCcCHHHHHHHHHHHcc
Confidence 34456666553321 3466666666554 89999999988776666654 356999999998888654
Done!