Query 031971
Match_columns 150
No_of_seqs 199 out of 1486
Neff 8.2
Searched_HMMs 13730
Date Mon Mar 25 12:30:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031971.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031971hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.6 4.7E-16 3.4E-20 102.3 4.1 64 49-115 19-85 (103)
2 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.6 2.1E-15 1.5E-19 94.4 5.7 66 47-115 4-70 (78)
3 d2c2la2 g.44.1.2 (A:225-304) S 99.5 1E-15 7.6E-20 96.2 3.7 63 48-113 4-67 (80)
4 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.5 1.4E-15 1E-19 96.8 3.8 49 49-97 21-70 (86)
5 d1fbva4 g.44.1.1 (A:356-434) C 99.5 4.9E-15 3.6E-19 92.9 5.3 48 51-98 23-71 (79)
6 d2baya1 g.44.1.2 (A:1-56) Pre- 99.5 2.2E-15 1.6E-19 88.6 2.0 47 52-98 1-48 (56)
7 d1chca_ g.44.1.1 (A:) Immediat 99.5 4.2E-15 3.1E-19 90.7 2.5 48 50-97 4-52 (68)
8 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.5 4.2E-15 3.1E-19 96.6 2.4 62 49-115 20-82 (97)
9 d1iyma_ g.44.1.1 (A:) EL5 RING 99.5 1.1E-14 7.8E-19 85.3 3.2 48 48-95 2-53 (55)
10 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.4 3.4E-14 2.5E-18 85.8 3.4 48 50-97 2-55 (65)
11 d1bora_ g.44.1.1 (A:) Acute pr 99.4 1.3E-14 9.8E-19 85.1 1.1 44 50-96 5-48 (56)
12 d1wgma_ g.44.1.2 (A:) Ubiquiti 99.4 2E-13 1.5E-17 88.7 5.9 65 47-114 18-83 (98)
13 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.3 2.3E-13 1.7E-17 78.5 3.5 45 52-96 1-50 (52)
14 d3dplr1 g.44.1.1 (R:19-106) RI 99.2 2.4E-12 1.8E-16 81.9 3.9 47 50-96 20-84 (88)
15 d1v87a_ g.44.1.1 (A:) Deltex p 99.2 3.7E-12 2.7E-16 84.5 3.7 48 50-97 24-94 (114)
16 d1vyxa_ g.44.1.3 (A:) IE1B pro 99.0 9.4E-11 6.9E-15 69.1 4.0 48 49-96 4-58 (60)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 98.5 2.3E-08 1.7E-12 63.5 2.6 45 49-93 3-58 (94)
18 d2cs3a1 g.44.1.3 (A:8-87) Prot 93.7 0.035 2.6E-06 32.3 3.5 44 49-92 6-58 (80)
19 d1wila_ g.50.1.3 (A:) Hypothet 91.9 0.13 9.4E-06 30.7 4.4 45 48-93 12-75 (89)
20 d1f62a_ g.50.1.2 (A:) Williams 84.1 0.22 1.6E-05 26.5 1.6 41 53-93 2-49 (51)
21 d1weoa_ g.44.1.1 (A:) Cellulos 82.3 1 7.6E-05 26.7 4.2 49 49-97 14-70 (93)
22 d1z60a1 g.49.1.2 (A:328-386) T 80.2 0.78 5.7E-05 25.3 2.9 42 50-91 14-58 (59)
23 d1y02a2 g.50.1.1 (A:20-70) Rif 77.2 0.078 5.6E-06 28.8 -2.0 41 53-93 2-46 (51)
24 d1zbdb_ g.50.1.1 (B:) Effector 76.4 0.73 5.3E-05 29.1 2.4 30 49-78 46-80 (124)
25 d1dvpa2 g.50.1.1 (A:149-220) H 75.1 0.7 5.1E-05 26.4 1.9 31 49-79 11-45 (72)
26 d1vfya_ g.50.1.1 (A:) vps27p p 74.8 0.74 5.4E-05 25.9 1.9 29 51-79 5-37 (67)
27 d1mm2a_ g.50.1.2 (A:) Mi2-beta 72.9 0.38 2.8E-05 26.6 0.2 45 50-94 8-56 (61)
28 d2o35a1 a.293.1.1 (A:2-80) Hyp 69.7 0.9 6.6E-05 26.4 1.4 12 72-83 39-50 (79)
29 d1joca1 g.50.1.1 (A:1348-1411) 68.6 0.9 6.5E-05 25.3 1.2 30 50-79 7-40 (64)
30 d2epqa1 g.37.1.1 (A:380-411) P 67.7 0.81 5.9E-05 21.5 0.7 12 51-62 3-14 (32)
31 d1weva_ g.50.1.2 (A:) PHD fing 67.1 0.56 4.1E-05 27.7 0.1 47 50-96 15-74 (88)
32 d2dloa1 g.39.1.3 (A:8-42) Thyr 67.0 0.73 5.3E-05 22.7 0.5 28 50-77 7-34 (35)
33 d1we9a_ g.50.1.2 (A:) PHD fing 66.8 0.36 2.6E-05 26.8 -0.8 45 50-94 5-58 (64)
34 d1fp0a1 g.50.1.2 (A:19-88) Nuc 64.6 1.1 7.8E-05 25.3 1.0 45 51-95 7-55 (70)
35 d1wema_ g.50.1.2 (A:) Death as 61.0 4.8 0.00035 22.5 3.6 44 50-94 15-70 (76)
36 d1v6ga1 g.39.1.3 (A:1-41) Acti 57.8 0.94 6.8E-05 23.1 -0.1 27 51-77 15-41 (41)
37 d2jnea1 g.41.18.1 (A:1-71) Hyp 57.3 0.15 1.1E-05 29.5 -3.8 41 51-96 2-42 (71)
38 d1wesa_ g.50.1.2 (A:) PHD Inhi 57.1 1.7 0.00012 24.7 0.9 43 50-94 15-65 (71)
39 d2dlqa3 g.37.1.1 (A:63-92) GLI 56.9 1.8 0.00013 19.8 0.8 15 50-64 3-17 (30)
40 d1x3ha1 g.39.1.3 (A:8-42) Leup 56.3 1 7.5E-05 22.1 -0.1 27 51-77 8-34 (35)
41 d2fiya1 e.59.1.1 (A:19-308) Fd 52.3 0.85 6.2E-05 33.2 -1.2 46 49-94 162-213 (290)
42 d1wepa_ g.50.1.2 (A:) PHD fing 42.5 14 0.001 20.7 3.5 44 51-95 12-64 (79)
43 d1wfla_ g.80.1.1 (A:) Zinc fin 41.6 14 0.001 20.9 3.3 27 50-76 24-51 (74)
44 d1wewa_ g.50.1.2 (A:) Sumoylat 40.7 18 0.0013 20.2 3.8 45 49-94 14-72 (78)
45 d1wfha_ g.80.1.1 (A:) Zinc fin 38.5 18 0.0013 19.8 3.3 29 49-77 13-42 (64)
46 d1x6aa1 g.39.1.3 (A:8-41) Lim 37.4 6 0.00043 18.9 1.0 27 51-77 8-34 (34)
47 d1wfka_ g.50.1.1 (A:) Zinc fin 36.6 7 0.00051 22.8 1.4 32 49-80 7-42 (88)
48 d2gmga1 a.4.5.82 (A:1-105) Hyp 35.7 4.4 0.00032 24.8 0.4 28 63-95 67-94 (105)
49 d1ibia2 g.39.1.3 (A:145-175) C 33.4 6.7 0.00049 18.1 0.7 27 52-78 1-28 (31)
50 d1wfpa_ g.80.1.1 (A:) Zinc fin 31.7 21 0.0016 20.1 3.0 29 49-77 23-52 (74)
51 d2ct7a1 g.44.1.4 (A:8-80) Ring 31.1 1.1 8.3E-05 25.4 -2.9 33 51-83 18-56 (73)
52 d1wffa_ g.80.1.1 (A:) ANUBL1 ( 30.9 15 0.0011 21.3 2.3 27 51-77 25-53 (85)
53 d2d8xa1 g.39.1.3 (A:33-64) Pin 29.9 13 0.00097 17.2 1.5 28 53-80 1-29 (32)
54 d1v6ga2 g.39.1.3 (A:42-81) Act 29.8 12 0.00087 18.3 1.4 28 52-79 1-30 (40)
55 d1lkoa2 g.41.5.1 (A:148-191) R 28.0 7.2 0.00052 19.9 0.4 25 65-95 10-34 (44)
56 d1yuja_ g.37.1.1 (A:) GAGA fac 25.2 15 0.0011 18.9 1.3 16 48-63 21-36 (54)
57 d1weea_ g.50.1.2 (A:) PHD fing 24.5 5.3 0.00039 22.1 -0.7 43 51-94 16-66 (72)
58 d1p91a_ c.66.1.33 (A:) rRNA me 23.8 10 0.00076 26.2 0.7 11 52-62 2-12 (268)
59 d2j9ub1 g.41.11.1 (B:115-161) 23.7 16 0.0012 18.6 1.3 7 53-59 5-11 (47)
60 d2g45a1 g.44.1.5 (A:173-285) U 21.6 19 0.0014 21.9 1.6 26 50-75 23-48 (113)
61 d1erda_ a.10.1.1 (A:) ER-2 {Eu 20.0 6.1 0.00044 19.0 -0.9 15 66-80 9-23 (40)
No 1
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=4.7e-16 Score=102.31 Aligned_cols=64 Identities=27% Similarity=0.601 Sum_probs=51.0
Q ss_pred CCcccccccccccccceecCCCCcccHHHHHHHhhCC---CCCccccccccccCCCCccccCchhhhhhh
Q 031971 49 EREEECGICLEICCKIVLPDCNHSMCMRCYRNWRARS---QSCPFCRDSLRRVNSGDLWIYTSEDDIVDL 115 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~---~~CP~Cr~~~~~~~~~~~~~~~~~~~i~~~ 115 (150)
.+.+.|+||++.+.+|++++|||+||..||..|+... ..||.||.++.. .++..+..+.++++.
T Consensus 19 ~~~l~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~---~~l~~n~~l~~~ve~ 85 (103)
T d1jm7a_ 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK---RSLQESTRFSQLVEE 85 (103)
T ss_dssp HHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT---TTCBCCCSSSHHHHH
T ss_pred ccCcCCCccCchhCCeEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCCh---hhCCcCHHHHHHHHH
Confidence 3467899999999999999999999999999998643 479999998853 345555555555543
No 2
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.56 E-value=2.1e-15 Score=94.37 Aligned_cols=66 Identities=17% Similarity=0.305 Sum_probs=54.9
Q ss_pred CCCCcccccccccccccceecCCCCcccHHHHHHHhhC-CCCCccccccccccCCCCccccCchhhhhhh
Q 031971 47 DIEREEECGICLEICCKIVLPDCNHSMCMRCYRNWRAR-SQSCPFCRDSLRRVNSGDLWIYTSEDDIVDL 115 (150)
Q Consensus 47 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~~~~~~~~~~~~~~~~i~~~ 115 (150)
++.+++.|+||++.|.+|++++|||+||..||..|+.. ...||.|+.++.. ..+..|..+.++++.
T Consensus 4 eiP~~l~CpIc~~~m~dPV~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~---~~l~pN~~L~~~I~~ 70 (78)
T d1t1ha_ 4 EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLH---AGLTPNYVLKSLIAL 70 (78)
T ss_dssp CCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS---CCCEECTTTHHHHHH
T ss_pred CCCccCCCcCcCchhhCceEccCCCcchHHHHHHHHHHCCCCCCcccccCCc---ccccchHHHHHHHHH
Confidence 35688999999999999999999999999999999975 5679999998853 356667777666654
No 3
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=1e-15 Score=96.24 Aligned_cols=63 Identities=11% Similarity=0.060 Sum_probs=50.1
Q ss_pred CCCcccccccccccccceecCCCCcccHHHHHHHhh-CCCCCccccccccccCCCCccccCchhhhh
Q 031971 48 IEREEECGICLEICCKIVLPDCNHSMCMRCYRNWRA-RSQSCPFCRDSLRRVNSGDLWIYTSEDDIV 113 (150)
Q Consensus 48 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~~~~~~~~~~~~~~~~i~ 113 (150)
+.+++.|+||+++|.+|++++|||+||..||..|+. +...||.|+.++... .+..|..+.+++
T Consensus 4 iP~~l~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~---~l~pN~~L~~~I 67 (80)
T d2c2la2 4 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQE---QLIPNLAMKEVI 67 (80)
T ss_dssp CCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGG---GCEECHHHHHHH
T ss_pred CCccccCcCcCchhhhhcccCCcCeecHHHHHHHHhcCCccCCCcccccccc---ccccHHHHHHHH
Confidence 457899999999999999999999999999999986 566899999987532 344444444433
No 4
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=1.4e-15 Score=96.84 Aligned_cols=49 Identities=27% Similarity=0.519 Sum_probs=43.8
Q ss_pred CCcccccccccccccceecCCCCcccHHHHHHHhh-CCCCCccccccccc
Q 031971 49 EREEECGICLEICCKIVLPDCNHSMCMRCYRNWRA-RSQSCPFCRDSLRR 97 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~~ 97 (150)
.+.+.|+||++.+.+|++++|||+||..||.+|++ +...||.||.++..
T Consensus 21 ~~~l~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~ 70 (86)
T d1rmda2 21 VKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (86)
T ss_dssp HHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred ccCcCCccCCcchhcceecCCCChhhHHHHHHHHhhCCCcCcccCCCCCh
Confidence 35678999999999999999999999999999986 55689999998853
No 5
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=4.9e-15 Score=92.94 Aligned_cols=48 Identities=33% Similarity=0.863 Sum_probs=43.0
Q ss_pred cccccccccccccceecCCCCcccHHHHHHHhh-CCCCCcccccccccc
Q 031971 51 EEECGICLEICCKIVLPDCNHSMCMRCYRNWRA-RSQSCPFCRDSLRRV 98 (150)
Q Consensus 51 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~~~ 98 (150)
...|+||++.+.+|++++|||.||..|+.+|+. +...||+||..+...
T Consensus 23 ~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~ 71 (79)
T d1fbva4 23 FQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGT 71 (79)
T ss_dssp TTBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCC
T ss_pred CCCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCC
Confidence 356999999999999999999999999999997 567899999998643
No 6
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.50 E-value=2.2e-15 Score=88.61 Aligned_cols=47 Identities=13% Similarity=0.142 Sum_probs=42.8
Q ss_pred ccccccccccccceec-CCCCcccHHHHHHHhhCCCCCcccccccccc
Q 031971 52 EECGICLEICCKIVLP-DCNHSMCMRCYRNWRARSQSCPFCRDSLRRV 98 (150)
Q Consensus 52 ~~C~IC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 98 (150)
+.|+||++.+.+|+.+ .|||.||..||.+|++.+..||.||.++...
T Consensus 1 l~C~Ic~~~~~~Pv~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l~~~ 48 (56)
T d2baya1 1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIE 48 (56)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGG
T ss_pred CCCccCCchHHhcCccCCCCCcccHHHHHHHHhhccCCCccCCcCCHH
Confidence 4799999999999876 6999999999999999889999999998644
No 7
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.48 E-value=4.2e-15 Score=90.66 Aligned_cols=48 Identities=29% Similarity=0.765 Sum_probs=42.2
Q ss_pred Ccccccccccccccce-ecCCCCcccHHHHHHHhhCCCCCccccccccc
Q 031971 50 REEECGICLEICCKIV-LPDCNHSMCMRCYRNWRARSQSCPFCRDSLRR 97 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p~-~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 97 (150)
....|+||++.+.+++ .++|||.||..|+.+|++.+..||+||.++..
T Consensus 4 ~~d~C~IC~~~~~~~~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~~ 52 (68)
T d1chca_ 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCC
T ss_pred CCCCCccCCcCccCCcEEeCCCCcCcHHHHHHHHHhCCcCCCCCcchHh
Confidence 3456999999998874 58999999999999999999999999998753
No 8
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=4.2e-15 Score=96.63 Aligned_cols=62 Identities=27% Similarity=0.552 Sum_probs=49.0
Q ss_pred CCcccccccccccccceec-CCCCcccHHHHHHHhhCCCCCccccccccccCCCCccccCchhhhhhh
Q 031971 49 EREEECGICLEICCKIVLP-DCNHSMCMRCYRNWRARSQSCPFCRDSLRRVNSGDLWIYTSEDDIVDL 115 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~~~i~~~ 115 (150)
.+.+.|+||++.+.+|+.+ +|||+||..||.+|+. ..||.||.++.. .++..+..+.++++.
T Consensus 20 ~~~l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~---~~l~~n~~l~~lv~~ 82 (97)
T d1jm7b_ 20 EKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWI---QDLKINRQLDSMIQL 82 (97)
T ss_dssp HHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSC---SSCCCCHHHHHHHHH
T ss_pred hhcCCCccCCchhhcCceeCCCCCchhHHHHHHHHh--ccccccCCcCch---hhCcccHHHHHHHHH
Confidence 3567899999999999875 8999999999999975 459999998743 455566666565544
No 9
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.47 E-value=1.1e-14 Score=85.27 Aligned_cols=48 Identities=25% Similarity=0.689 Sum_probs=41.2
Q ss_pred CCCcccccccccccccc---eec-CCCCcccHHHHHHHhhCCCCCccccccc
Q 031971 48 IEREEECGICLEICCKI---VLP-DCNHSMCMRCYRNWRARSQSCPFCRDSL 95 (150)
Q Consensus 48 ~~~~~~C~IC~~~~~~p---~~~-~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~ 95 (150)
++++..|+||++.+.+. ..+ .|||.||..|+.+|++.+..||+||.++
T Consensus 2 ~ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~i 53 (55)
T d1iyma_ 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CCCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhCCcCCCCCCEe
Confidence 35677899999999753 334 6999999999999999999999999876
No 10
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=3.4e-14 Score=85.84 Aligned_cols=48 Identities=23% Similarity=0.650 Sum_probs=39.2
Q ss_pred Cccccccccccccc-----ceecCCCCcccHHHHHHHhh-CCCCCccccccccc
Q 031971 50 REEECGICLEICCK-----IVLPDCNHSMCMRCYRNWRA-RSQSCPFCRDSLRR 97 (150)
Q Consensus 50 ~~~~C~IC~~~~~~-----p~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~~ 97 (150)
++..|+||++.+.. .+.++|||.||..||..|+. .+..||.||.++..
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~ 55 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCccc
Confidence 46789999987542 25679999999999999986 45679999998854
No 11
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.3e-14 Score=85.10 Aligned_cols=44 Identities=23% Similarity=0.531 Sum_probs=39.7
Q ss_pred CcccccccccccccceecCCCCcccHHHHHHHhhCCCCCcccccccc
Q 031971 50 REEECGICLEICCKIVLPDCNHSMCMRCYRNWRARSQSCPFCRDSLR 96 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 96 (150)
+.+.|+||++.+.+|++++|||.||..|+.+| ...||.||.++.
T Consensus 5 ~~l~C~IC~~~~~~p~~lpCgH~fC~~Ci~~~---~~~CP~Cr~~~~ 48 (56)
T d1bora_ 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEAS---GMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSS---SSSCSSCCSSSS
T ss_pred CCCCCcccCcccCCCEEecCCCHHhHHHHHcC---CCcCcCCCCccc
Confidence 45799999999999999999999999998765 567999999885
No 12
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=2e-13 Score=88.74 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=53.1
Q ss_pred CCCCcccccccccccccceecCCCC-cccHHHHHHHhhCCCCCccccccccccCCCCccccCchhhhhh
Q 031971 47 DIEREEECGICLEICCKIVLPDCNH-SMCMRCYRNWRARSQSCPFCRDSLRRVNSGDLWIYTSEDDIVD 114 (150)
Q Consensus 47 ~~~~~~~C~IC~~~~~~p~~~~CgH-~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~~~i~~ 114 (150)
+.-+++.||||.++|.+||+++||| +||..||.+|+..+..||.|+.++.. ..+..|..+.+.++
T Consensus 18 ~~P~~f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~~---~~L~pN~~Lr~~I~ 83 (98)
T d1wgma_ 18 DACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTM---DQIRPNTELKEKIQ 83 (98)
T ss_dssp SCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCT---TTSEECHHHHHHHH
T ss_pred CCcHHhCCcCchhHHHHHHhcccccchhhHHHHHHHHHhcCCcccccccccc---hhhcchHHHHHHHH
Confidence 3456899999999999999998775 89999999999998999999998853 35666666655444
No 13
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=2.3e-13 Score=78.52 Aligned_cols=45 Identities=27% Similarity=0.619 Sum_probs=37.7
Q ss_pred ccccccccccccc----eecCCCCcccHHHHHHHhhC-CCCCcccccccc
Q 031971 52 EECGICLEICCKI----VLPDCNHSMCMRCYRNWRAR-SQSCPFCRDSLR 96 (150)
Q Consensus 52 ~~C~IC~~~~~~p----~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~ 96 (150)
+.|+||++.+... ..++|||.||..|+.+|+.. +..||+||.++.
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~ 50 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYP 50 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCS
T ss_pred CCCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCC
Confidence 4699999988642 45689999999999999985 557999999874
No 14
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=2.4e-12 Score=81.93 Aligned_cols=47 Identities=23% Similarity=0.615 Sum_probs=39.5
Q ss_pred Cccccccccccccc------------------ceecCCCCcccHHHHHHHhhCCCCCcccccccc
Q 031971 50 REEECGICLEICCK------------------IVLPDCNHSMCMRCYRNWRARSQSCPFCRDSLR 96 (150)
Q Consensus 50 ~~~~C~IC~~~~~~------------------p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 96 (150)
.+..|+||++.+.+ ++.++|||.||..||.+|++.+.+||+||+++.
T Consensus 20 ~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~ 84 (88)
T d3dplr1 20 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 84 (88)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHCCcCCCCCCccc
Confidence 34569999887764 245689999999999999999999999999874
No 15
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.20 E-value=3.7e-12 Score=84.55 Aligned_cols=48 Identities=29% Similarity=0.634 Sum_probs=38.7
Q ss_pred Ccccccccccccccc------------------eecCCCCcccHHHHHHHhhC-----CCCCccccccccc
Q 031971 50 REEECGICLEICCKI------------------VLPDCNHSMCMRCYRNWRAR-----SQSCPFCRDSLRR 97 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p------------------~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~~~~ 97 (150)
.+..|+||++.+..+ ..++|||.||..||..|+.. ...||+||..+..
T Consensus 24 ~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T d1v87a_ 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred ccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhcc
Confidence 456799999987642 35799999999999999974 3479999998743
No 16
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=99.02 E-value=9.4e-11 Score=69.12 Aligned_cols=48 Identities=23% Similarity=0.499 Sum_probs=40.3
Q ss_pred CCcccccccccccccceecCC-----CCcccHHHHHHHhh--CCCCCcccccccc
Q 031971 49 EREEECGICLEICCKIVLPDC-----NHSMCMRCYRNWRA--RSQSCPFCRDSLR 96 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p~~~~C-----gH~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 96 (150)
++...|+||++.+.++...+| +|.||..|+..|+. ++..||+||+++.
T Consensus 4 ed~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeee
Confidence 567789999999888766655 59999999999985 5678999999874
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50 E-value=2.3e-08 Score=63.47 Aligned_cols=45 Identities=20% Similarity=0.512 Sum_probs=34.4
Q ss_pred CCccccccccccccc---ceecCCCCcccHHHHHHHhhC--------CCCCccccc
Q 031971 49 EREEECGICLEICCK---IVLPDCNHSMCMRCYRNWRAR--------SQSCPFCRD 93 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~--------~~~CP~Cr~ 93 (150)
.....|+||++.+.. +..++|||.||..|+..|++. ...||.|+-
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C 58 (94)
T d1wima_ 3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAAC 58 (94)
T ss_dssp CSBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTC
T ss_pred CCCCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCCC
Confidence 346689999998754 345689999999999998761 236998654
No 18
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.66 E-value=0.035 Score=32.26 Aligned_cols=44 Identities=25% Similarity=0.489 Sum_probs=32.1
Q ss_pred CCcccccccccccccceecCC----CCcccHHHHHHHhh-----CCCCCcccc
Q 031971 49 EREEECGICLEICCKIVLPDC----NHSMCMRCYRNWRA-----RSQSCPFCR 92 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p~~~~C----gH~fC~~Ci~~~~~-----~~~~CP~Cr 92 (150)
...+.|.+|.+.+.+.-...| +|.||..|-+...+ ....||.-.
T Consensus 6 ~~~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sik~q~~~~evyCPSG~ 58 (80)
T d2cs3a1 6 SGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPSGE 58 (80)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHHHSSSCCCCTTSS
T ss_pred CCceeeeeehhhhcCCceEeCCCCcCCceeccccHHHHHhcCCCCcEECCCCC
Confidence 345889999999998755544 59999999988665 234466543
No 19
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.89 E-value=0.13 Score=30.68 Aligned_cols=45 Identities=24% Similarity=0.618 Sum_probs=32.4
Q ss_pred CCCcccccccccccccceecC---CCCcccHHHHHHHh--h--------------CCCCCccccc
Q 031971 48 IEREEECGICLEICCKIVLPD---CNHSMCMRCYRNWR--A--------------RSQSCPFCRD 93 (150)
Q Consensus 48 ~~~~~~C~IC~~~~~~p~~~~---CgH~fC~~Ci~~~~--~--------------~~~~CP~Cr~ 93 (150)
...+..|.|| +.+..-..+| |+..||..|+.+.. . ...+|+.|..
T Consensus 12 v~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~gyl~~e~a~e~~e~A~T~~GWSC~~C~n 75 (89)
T d1wila_ 12 VVNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CCCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCcCcccccc-CcccccceecceeecchhhHHHHHHhcccccHHHHHHHHhhcCCCCcchhhhcc
Confidence 4678899999 5555544555 67899999999953 2 1357999955
No 20
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.09 E-value=0.22 Score=26.48 Aligned_cols=41 Identities=24% Similarity=0.556 Sum_probs=27.3
Q ss_pred ccccccccccccee---cCCCCcccHHHHHHHhh----CCCCCccccc
Q 031971 53 ECGICLEICCKIVL---PDCNHSMCMRCYRNWRA----RSQSCPFCRD 93 (150)
Q Consensus 53 ~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~----~~~~CP~Cr~ 93 (150)
.|.||...-....+ -.|...||..|+..-+. ....||.|+.
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 47788654432222 27888999999977433 3457999875
No 21
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=82.33 E-value=1 Score=26.74 Aligned_cols=49 Identities=27% Similarity=0.681 Sum_probs=36.3
Q ss_pred CCcccccccccccccc----ee---cCCCCcccHHHHHH-HhhCCCCCccccccccc
Q 031971 49 EREEECGICLEICCKI----VL---PDCNHSMCMRCYRN-WRARSQSCPFCRDSLRR 97 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p----~~---~~CgH~fC~~Ci~~-~~~~~~~CP~Cr~~~~~ 97 (150)
.....|.||-+.+... +. -.|+--.|..|..= ....+..||.|+.++.+
T Consensus 14 ~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr 70 (93)
T d1weoa_ 14 LDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp CSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred cccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhh
Confidence 3467899999876632 22 25777789999865 66688999999988753
No 22
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.17 E-value=0.78 Score=25.34 Aligned_cols=42 Identities=24% Similarity=0.434 Sum_probs=29.7
Q ss_pred Cccccccccccccccee---cCCCCcccHHHHHHHhhCCCCCccc
Q 031971 50 REEECGICLEICCKIVL---PDCNHSMCMRCYRNWRARSQSCPFC 91 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~~~~~CP~C 91 (150)
....|--|+..+.+... ..|++.||.+|=.=..+.--.||-|
T Consensus 14 ~~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD~fiHe~lh~CpgC 58 (59)
T d1z60a1 14 GERFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp SCCEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CCCCccCCCCcCCCCceEECcCCCCccccccchhhhhhhcCCCCC
Confidence 35578889888877643 4788999999944333345678877
No 23
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.22 E-value=0.078 Score=28.76 Aligned_cols=41 Identities=22% Similarity=0.606 Sum_probs=25.2
Q ss_pred cccccccccccce----ecCCCCcccHHHHHHHhhCCCCCccccc
Q 031971 53 ECGICLEICCKIV----LPDCNHSMCMRCYRNWRARSQSCPFCRD 93 (150)
Q Consensus 53 ~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~ 93 (150)
.|.+|...|..-. --.||..||..|..........|..|..
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~~RvC~~C~~ 46 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 46 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred CccccCCcccCCccCcccccCCcccCccccCCCCCCCeECHhHhh
Confidence 4777887776321 2479999999996544334456766643
No 24
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=76.44 E-value=0.73 Score=29.11 Aligned_cols=30 Identities=27% Similarity=0.629 Sum_probs=21.4
Q ss_pred CCccccccccccccc---c--eecCCCCcccHHHH
Q 031971 49 EREEECGICLEICCK---I--VLPDCNHSMCMRCY 78 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~---p--~~~~CgH~fC~~Ci 78 (150)
.....|.+|...|.. . .-..||+.||..|-
T Consensus 46 ~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~ 80 (124)
T d1zbdb_ 46 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 80 (124)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred cCCCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence 345679999887652 2 23579999999984
No 25
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=75.15 E-value=0.7 Score=26.44 Aligned_cols=31 Identities=16% Similarity=0.371 Sum_probs=22.9
Q ss_pred CCcccccccccccccce----ecCCCCcccHHHHH
Q 031971 49 EREEECGICLEICCKIV----LPDCNHSMCMRCYR 79 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~ 79 (150)
.++..|.+|...|.--. --.||+.||..|..
T Consensus 11 ~~~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~ 45 (72)
T d1dvpa2 11 ADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTA 45 (72)
T ss_dssp CCCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSC
T ss_pred CcCCccccCCCcccCccccccccccCCeeChhhhC
Confidence 45567999998886422 23799999999954
No 26
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.78 E-value=0.74 Score=25.90 Aligned_cols=29 Identities=17% Similarity=0.437 Sum_probs=21.0
Q ss_pred cccccccccccccce----ecCCCCcccHHHHH
Q 031971 51 EEECGICLEICCKIV----LPDCNHSMCMRCYR 79 (150)
Q Consensus 51 ~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~ 79 (150)
+..|.+|...|.--. --.||..||..|..
T Consensus 5 ~~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~ 37 (67)
T d1vfya_ 5 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 37 (67)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred CcccccCCCcccCcccccccccCCCEecccccC
Confidence 346999998876321 13799999999953
No 27
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.94 E-value=0.38 Score=26.55 Aligned_cols=45 Identities=20% Similarity=0.372 Sum_probs=28.8
Q ss_pred CcccccccccccccceecCCCCcccHHHHHHHhh----CCCCCcccccc
Q 031971 50 REEECGICLEICCKIVLPDCNHSMCMRCYRNWRA----RSQSCPFCRDS 94 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~----~~~~CP~Cr~~ 94 (150)
....|.+|.+.=.-..--.|.-.||..|+..... ....||.|+..
T Consensus 8 ~~~~C~~C~~~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~ 56 (61)
T d1mm2a_ 8 HMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CcCCCcCCCCCCeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCc
Confidence 4457999985322111236888999999865332 35679999754
No 28
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=69.74 E-value=0.9 Score=26.41 Aligned_cols=12 Identities=33% Similarity=1.082 Sum_probs=10.5
Q ss_pred cccHHHHHHHhh
Q 031971 72 SMCMRCYRNWRA 83 (150)
Q Consensus 72 ~fC~~Ci~~~~~ 83 (150)
.||..|+..|..
T Consensus 39 GFCRNCLskWy~ 50 (79)
T d2o35a1 39 GFCRNCLSNWYR 50 (79)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999975
No 29
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.60 E-value=0.9 Score=25.28 Aligned_cols=30 Identities=20% Similarity=0.491 Sum_probs=21.6
Q ss_pred Ccccccccccccccce----ecCCCCcccHHHHH
Q 031971 50 REEECGICLEICCKIV----LPDCNHSMCMRCYR 79 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~ 79 (150)
+...|.+|...|.--. --.||+.||..|..
T Consensus 7 ~~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~ 40 (64)
T d1joca1 7 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSA 40 (64)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred cCCcCcCcCCcccCCccccchhhhCCeecccccC
Confidence 3456999988876432 23799999999954
No 30
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.69 E-value=0.81 Score=21.48 Aligned_cols=12 Identities=17% Similarity=0.232 Sum_probs=6.7
Q ss_pred cccccccccccc
Q 031971 51 EEECGICLEICC 62 (150)
Q Consensus 51 ~~~C~IC~~~~~ 62 (150)
.+.|+||...|.
T Consensus 3 p~~cpic~qrfk 14 (32)
T d2epqa1 3 PYSCPVCGLRFK 14 (32)
T ss_dssp SSEETTTTEECS
T ss_pred CcccchHHHHhh
Confidence 445666665554
No 31
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.13 E-value=0.56 Score=27.66 Aligned_cols=47 Identities=13% Similarity=0.394 Sum_probs=31.1
Q ss_pred Cccccccccccccc---cee--cCCCCcccHHHHHHHh-----h---CCCCCcccccccc
Q 031971 50 REEECGICLEICCK---IVL--PDCNHSMCMRCYRNWR-----A---RSQSCPFCRDSLR 96 (150)
Q Consensus 50 ~~~~C~IC~~~~~~---p~~--~~CgH~fC~~Ci~~~~-----~---~~~~CP~Cr~~~~ 96 (150)
....|.||...... .++ -.|+..||..|+.... . ....||.|.....
T Consensus 15 ~~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~~ 74 (88)
T d1weva_ 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CcCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCchHh
Confidence 45779999875442 122 2688899999976321 1 2568999976543
No 32
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.05 E-value=0.73 Score=22.67 Aligned_cols=28 Identities=18% Similarity=0.369 Sum_probs=23.3
Q ss_pred CcccccccccccccceecCCCCcccHHH
Q 031971 50 REEECGICLEICCKIVLPDCNHSMCMRC 77 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p~~~~CgH~fC~~C 77 (150)
.-..|.+|...+.+.++-..|-.|+..|
T Consensus 7 tlEkC~~C~~~I~driLrA~Gk~yHP~C 34 (35)
T d2dloa1 7 TLEKCATCSQPILDRILRAMGKAYHPGC 34 (35)
T ss_dssp SCCBCTTTCCBCCSCCEEETTEEECTTT
T ss_pred HHHHHHHhchHHHHHHHHHhCCCCCCCC
Confidence 3467999999999998888888887766
No 33
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=66.80 E-value=0.36 Score=26.81 Aligned_cols=45 Identities=20% Similarity=0.476 Sum_probs=30.7
Q ss_pred Ccccccccccccccc-ee---cCCCCcccHHHHHH---Hhh--CCCCCcccccc
Q 031971 50 REEECGICLEICCKI-VL---PDCNHSMCMRCYRN---WRA--RSQSCPFCRDS 94 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p-~~---~~CgH~fC~~Ci~~---~~~--~~~~CP~Cr~~ 94 (150)
....|.+|.....+- .. -.|+..||..|+.. ... ....||.|+..
T Consensus 5 ~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 456899998765543 22 37889999999853 111 35689999753
No 34
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.55 E-value=1.1 Score=25.32 Aligned_cols=45 Identities=16% Similarity=0.367 Sum_probs=28.8
Q ss_pred cccccccccccccceecCCCCcccHHHHHHHhh----CCCCCccccccc
Q 031971 51 EEECGICLEICCKIVLPDCNHSMCMRCYRNWRA----RSQSCPFCRDSL 95 (150)
Q Consensus 51 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~----~~~~CP~Cr~~~ 95 (150)
...|.+|.+.=.-..--.|...||..|+.+.+. ....||.|+..-
T Consensus 7 c~~C~~C~~~~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 55 (70)
T d1fp0a1 7 ATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 55 (70)
T ss_dssp SSCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCCCCCCcCEEEECCCCChhhccccCCCCcCcCCCCCEECcCCcCcC
Confidence 456777765321111237889999999987543 346799996543
No 35
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=60.96 E-value=4.8 Score=22.45 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=28.5
Q ss_pred Ccccccccccccccceec---CCCCcccHHHHH----H-----HhhCCCCCcccccc
Q 031971 50 REEECGICLEICCKIVLP---DCNHSMCMRCYR----N-----WRARSQSCPFCRDS 94 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~----~-----~~~~~~~CP~Cr~~ 94 (150)
+...| ||.....+..++ .|.-.||..|+. . .......||.|+..
T Consensus 15 ~~~~C-iC~~~~~~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~~ 70 (76)
T d1wema_ 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CcCEE-ECCCccCCCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECCCCcCc
Confidence 34567 897665544344 677799999982 1 11245789999654
No 36
>d1v6ga1 g.39.1.3 (A:1-41) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.83 E-value=0.94 Score=23.09 Aligned_cols=27 Identities=15% Similarity=0.247 Sum_probs=23.2
Q ss_pred cccccccccccccceecCCCCcccHHH
Q 031971 51 EEECGICLEICCKIVLPDCNHSMCMRC 77 (150)
Q Consensus 51 ~~~C~IC~~~~~~p~~~~CgH~fC~~C 77 (150)
...|..|.+.+.-+++..=+|.|+..|
T Consensus 15 G~~C~~C~~~ItG~V~~Ag~~~yHP~C 41 (41)
T d1v6ga1 15 GTRCFSCDQFIEGEVVSALGKTYHPDC 41 (41)
T ss_dssp CCBCTTTCCBCCSCCEEETTEEECTTT
T ss_pred CcccccccCEeeeeeeEecCcccCCCC
Confidence 468999999999998888888898776
No 37
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=57.30 E-value=0.15 Score=29.46 Aligned_cols=41 Identities=24% Similarity=0.503 Sum_probs=25.9
Q ss_pred cccccccccccccceecCCCCcccHHHHHHHhhCCCCCcccccccc
Q 031971 51 EEECGICLEICCKIVLPDCNHSMCMRCYRNWRARSQSCPFCRDSLR 96 (150)
Q Consensus 51 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 96 (150)
+..||.|...+... =||.+|..|-..+ +....||.|..++.
T Consensus 2 ~~~CP~C~~eL~~~----~~~~~C~~C~~~~-~~~a~CPdC~~~Le 42 (71)
T d2jnea1 2 ELHCPQCQHVLDQD----NGHARCRSCGEFI-EMKALCPDCHQPLQ 42 (71)
T ss_dssp CCBCSSSCSBEEEE----TTEEEETTTCCEE-EEEEECTTTCSBCE
T ss_pred CCcCCCccCccccc----CCCEehhhhhhhh-eeEEeCCccccHHH
Confidence 45799998775531 1566777773332 23457999988764
No 38
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.06 E-value=1.7 Score=24.67 Aligned_cols=43 Identities=21% Similarity=0.485 Sum_probs=26.4
Q ss_pred Ccccccccccccccc-eecC---C-CCcccHHHHHHHhh---CCCCCcccccc
Q 031971 50 REEECGICLEICCKI-VLPD---C-NHSMCMRCYRNWRA---RSQSCPFCRDS 94 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p-~~~~---C-gH~fC~~Ci~~~~~---~~~~CP~Cr~~ 94 (150)
+...| ||......- +... | ...||..|+. ... ....||.|+..
T Consensus 15 e~~~C-iC~~~~~~~~i~c~~~~C~~~wfH~~Cvg-l~~~p~~~w~C~~C~~~ 65 (71)
T d1wesa_ 15 EPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVS-LTYKPKGKWYCPKCRGD 65 (71)
T ss_dssp SCCCS-TTCCCCCSSEECCSCTTCSCCCEETTTTT-CSSCCSSCCCCTTTSSC
T ss_pred CCCEE-EeCCCCCCCEEEEECCCCCCcCccCccCC-CCcCCCCcEECcCCccc
Confidence 34566 999765433 2332 3 3479999974 221 35689999754
No 39
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=56.85 E-value=1.8 Score=19.85 Aligned_cols=15 Identities=20% Similarity=0.463 Sum_probs=11.0
Q ss_pred Ccccccccccccccc
Q 031971 50 REEECGICLEICCKI 64 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p 64 (150)
..++|++|.+.|...
T Consensus 3 qvftcs~cqe~f~rr 17 (30)
T d2dlqa3 3 QVFTCSVCQETFRRR 17 (30)
T ss_dssp CCEECSSSCCEESSH
T ss_pred ceEEeHHHHHHHHHH
Confidence 457888888887653
No 40
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.33 E-value=1 Score=22.07 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=22.5
Q ss_pred cccccccccccccceecCCCCcccHHH
Q 031971 51 EEECGICLEICCKIVLPDCNHSMCMRC 77 (150)
Q Consensus 51 ~~~C~IC~~~~~~p~~~~CgH~fC~~C 77 (150)
...|.-|...+...++...|..||..|
T Consensus 8 apkC~~C~~~I~g~~v~Al~~~wHpeC 34 (35)
T d1x3ha1 8 SPKCGGCNRPVLENYLSAMDTVWHPEC 34 (35)
T ss_dssp SCBCTTTCCBCCSSCEEETTEEECTTT
T ss_pred ChhhhhcCCcccchheeecCCccCccc
Confidence 357999999999888888888888766
No 41
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=52.34 E-value=0.85 Score=33.24 Aligned_cols=46 Identities=20% Similarity=0.418 Sum_probs=33.0
Q ss_pred CCcccccccccccccceecC----CC--CcccHHHHHHHhhCCCCCcccccc
Q 031971 49 EREEECGICLEICCKIVLPD----CN--HSMCMRCYRNWRARSQSCPFCRDS 94 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p~~~~----Cg--H~fC~~Ci~~~~~~~~~CP~Cr~~ 94 (150)
+..-.||+|-....-.++.. =| +..|..|-..|......||.|...
T Consensus 162 ~~~~~CPvCGs~P~~s~l~~~~~~~G~R~l~C~~C~teW~~~R~~C~~Cg~~ 213 (290)
T d2fiya1 162 ESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES 213 (290)
T ss_dssp TTCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC
T ss_pred ccCCcCCCCCCcchhheeeccCCCCCceEEECCCCCCccccccccCCCCCCC
Confidence 45567999998766544432 33 446888888898888899999554
No 42
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.51 E-value=14 Score=20.71 Aligned_cols=44 Identities=16% Similarity=0.317 Sum_probs=28.2
Q ss_pred cccccccccccc-cceec---CCCCcccHHHHHH--Hh--h-CCCCCccccccc
Q 031971 51 EEECGICLEICC-KIVLP---DCNHSMCMRCYRN--WR--A-RSQSCPFCRDSL 95 (150)
Q Consensus 51 ~~~C~IC~~~~~-~p~~~---~CgH~fC~~Ci~~--~~--~-~~~~CP~Cr~~~ 95 (150)
...| ||..... +..++ .|.-.||..|+.- .. . ....||.|+...
T Consensus 12 pv~C-iC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~ 64 (79)
T d1wepa_ 12 PVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CeEe-ECCCccCCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCCc
Confidence 3445 8987643 22233 6888999999842 11 1 347899998754
No 43
>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=41.63 E-value=14 Score=20.93 Aligned_cols=27 Identities=15% Similarity=0.309 Sum_probs=20.2
Q ss_pred Cccccccccccccc-ceecCCCCcccHH
Q 031971 50 REEECGICLEICCK-IVLPDCNHSMCMR 76 (150)
Q Consensus 50 ~~~~C~IC~~~~~~-p~~~~CgH~fC~~ 76 (150)
....|.+|...+.- +..-.||..||..
T Consensus 24 k~~RC~~C~KKl~l~~~~CrCg~~FC~~ 51 (74)
T d1wfla_ 24 KKNRCFMCRKKVGLTGFDCRCGNLFCGL 51 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECTTSCEECSS
T ss_pred CCCcChhhCCcccceeeEccCCCEehhh
Confidence 45689999976553 4556899999974
No 44
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=40.68 E-value=18 Score=20.15 Aligned_cols=45 Identities=20% Similarity=0.337 Sum_probs=29.6
Q ss_pred CCcccccccccccccc--eec---CCCCcccHHHHHH----Hhh-----CCCCCcccccc
Q 031971 49 EREEECGICLEICCKI--VLP---DCNHSMCMRCYRN----WRA-----RSQSCPFCRDS 94 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p--~~~---~CgH~fC~~Ci~~----~~~-----~~~~CP~Cr~~ 94 (150)
.+...| ||.....+. +.. .|...||..|+.- +.. ....||.|+..
T Consensus 14 ~~~~~C-~C~~~~~~~~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T d1wewa_ 14 EIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CCccEe-ECCCccCCCcEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCc
Confidence 345678 898876543 344 3888999999731 111 23789999764
No 45
>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=38.54 E-value=18 Score=19.83 Aligned_cols=29 Identities=17% Similarity=0.471 Sum_probs=21.8
Q ss_pred CCccccccccccccc-ceecCCCCcccHHH
Q 031971 49 EREEECGICLEICCK-IVLPDCNHSMCMRC 77 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~-p~~~~CgH~fC~~C 77 (150)
.....|..|...+.- ...-.||+.||..-
T Consensus 13 ~k~~RC~~C~KKl~l~~~~CrCg~~FC~~H 42 (64)
T d1wfha_ 13 QRPNRCTVCRKRVGLTGFMCRCGTTFCGSH 42 (64)
T ss_dssp SSCCCCTTTCCCCCTTCEECSSSCEECTTT
T ss_pred CCCCcChhhCCCccceeeeccCCCEehhhc
Confidence 456789999987654 35668999999853
No 46
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.40 E-value=6 Score=18.92 Aligned_cols=27 Identities=15% Similarity=0.205 Sum_probs=22.4
Q ss_pred cccccccccccccceecCCCCcccHHH
Q 031971 51 EEECGICLEICCKIVLPDCNHSMCMRC 77 (150)
Q Consensus 51 ~~~C~IC~~~~~~p~~~~CgH~fC~~C 77 (150)
...|-.|-..+.-|++..=.|.|+..|
T Consensus 8 ge~C~~C~~~itGpvMvAG~~K~HPEC 34 (34)
T d1x6aa1 8 GEFCHGCSLLMTGPFMVAGEFKYHPEC 34 (34)
T ss_dssp SCBCTTTCCBCCSCCBCCTTCCBCTTS
T ss_pred HHHhhhhHhhcccceeeecccccCCCC
Confidence 457899999999999888888888765
No 47
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.57 E-value=7 Score=22.84 Aligned_cols=32 Identities=19% Similarity=0.404 Sum_probs=23.4
Q ss_pred CCcccccccccccccce----ecCCCCcccHHHHHH
Q 031971 49 EREEECGICLEICCKIV----LPDCNHSMCMRCYRN 80 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~ 80 (150)
.....|.+|...|.--. --.||-.||..|...
T Consensus 7 ~~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs~~ 42 (88)
T d1wfka_ 7 GMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCE
T ss_pred cccCcCcccCchhccccccccccccChhhChHHhCC
Confidence 34667999998886321 237999999999764
No 48
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=35.69 E-value=4.4 Score=24.76 Aligned_cols=28 Identities=14% Similarity=0.305 Sum_probs=18.1
Q ss_pred cceecCCCCcccHHHHHHHhhCCCCCccccccc
Q 031971 63 KIVLPDCNHSMCMRCYRNWRARSQSCPFCRDSL 95 (150)
Q Consensus 63 ~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~ 95 (150)
.|.-..||-.|= .-.+....||.|+...
T Consensus 67 Pp~CrkCGfvFr-----~~~kkPSRCP~CKSE~ 94 (105)
T d2gmga1 67 PAQCRKCGFVFK-----AEINIPSRCPKCKSEW 94 (105)
T ss_dssp CCBBTTTCCBCC-----CCSSCCSSCSSSCCCC
T ss_pred ChhhhhcCCeec-----ccCCCCCCCCCCCCcc
Confidence 345567887771 1234567899998864
No 49
>d1ibia2 g.39.1.3 (A:145-175) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=33.45 E-value=6.7 Score=18.06 Aligned_cols=27 Identities=19% Similarity=0.403 Sum_probs=18.2
Q ss_pred ccccccccccccc-eecCCCCcccHHHH
Q 031971 52 EECGICLEICCKI-VLPDCNHSMCMRCY 78 (150)
Q Consensus 52 ~~C~IC~~~~~~p-~~~~CgH~fC~~Ci 78 (150)
+.|+.|-.-+... +.-.=|..||..|.
T Consensus 1 frca~cgk~lestt~adkdgeiyck~cy 28 (31)
T d1ibia2 1 FRCAKCGKSLESTTLTEKEGEIYCKGCY 28 (31)
T ss_dssp EECSSSCCEECSSCSEEETTEEECHHHH
T ss_pred CccccccCccccceeeccCCcEEEeeee
Confidence 3688887766654 33456778888885
No 50
>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=31.73 E-value=21 Score=20.08 Aligned_cols=29 Identities=14% Similarity=0.287 Sum_probs=21.4
Q ss_pred CCcccccccccccccc-eecCCCCcccHHH
Q 031971 49 EREEECGICLEICCKI-VLPDCNHSMCMRC 77 (150)
Q Consensus 49 ~~~~~C~IC~~~~~~p-~~~~CgH~fC~~C 77 (150)
.....|..|...+.-. ..-.||+.||...
T Consensus 23 ~kk~RC~~C~KKl~l~~~~CrCg~~FC~~H 52 (74)
T d1wfpa_ 23 STATRCLSCNKKVGVTGFKCRCGSTFCGTH 52 (74)
T ss_dssp CCCCBCSSSCCBCTTTCEECTTSCEECTTT
T ss_pred CCCCcChhcCCccCCCceecCCCChhhhcc
Confidence 3467899999876543 4458999999864
No 51
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.10 E-value=1.1 Score=25.40 Aligned_cols=33 Identities=27% Similarity=0.659 Sum_probs=21.9
Q ss_pred ccccccccccccc-c----ee-cCCCCcccHHHHHHHhh
Q 031971 51 EEECGICLEICCK-I----VL-PDCNHSMCMRCYRNWRA 83 (150)
Q Consensus 51 ~~~C~IC~~~~~~-p----~~-~~CgH~fC~~Ci~~~~~ 83 (150)
-.-||-|...+.. + ++ ..||+.||..|-.+|..
T Consensus 18 ~k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w~~ 56 (73)
T d2ct7a1 18 FLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEE 56 (73)
T ss_dssp EECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCT
T ss_pred CCCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcchhc
Confidence 4567878765442 1 22 37899999999887743
No 52
>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.91 E-value=15 Score=21.29 Aligned_cols=27 Identities=15% Similarity=0.338 Sum_probs=21.3
Q ss_pred ccccccccccccc--ceecCCCCcccHHH
Q 031971 51 EEECGICLEICCK--IVLPDCNHSMCMRC 77 (150)
Q Consensus 51 ~~~C~IC~~~~~~--p~~~~CgH~fC~~C 77 (150)
...|.+|...+.- +..-.||+.||...
T Consensus 25 ~~RC~~C~KKl~l~~~~~CrCg~~FC~~H 53 (85)
T d1wffa_ 25 MKHCFLCGKKTGLATSFECRCGNNFCASH 53 (85)
T ss_dssp CCBCSSSCCBCSSSSCEECTTCCEECTTT
T ss_pred CCcChhcCCeecCCcCeecCCCCEehhhc
Confidence 4589999987763 56668999999865
No 53
>d2d8xa1 g.39.1.3 (A:33-64) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.90 E-value=13 Score=17.24 Aligned_cols=28 Identities=21% Similarity=0.689 Sum_probs=19.5
Q ss_pred cccccccccccce-ecCCCCcccHHHHHH
Q 031971 53 ECGICLEICCKIV-LPDCNHSMCMRCYRN 80 (150)
Q Consensus 53 ~C~IC~~~~~~p~-~~~CgH~fC~~Ci~~ 80 (150)
.|.||...+.+.. .-+=|...|..|-.+
T Consensus 1 rC~~C~~~LAD~GFvKnagR~LCrpch~r 29 (32)
T d2d8xa1 1 RCDLCQEVLADIGFVKNAGRHLCRPCHNR 29 (32)
T ss_dssp BCSSSCCBCSSSCCEEETTEEECHHHHHH
T ss_pred CchHHHhHHHHhhhhhcccccccchhhhh
Confidence 4888998888764 335666778877543
No 54
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.76 E-value=12 Score=18.35 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=16.7
Q ss_pred cccccccccccc--ceecCCCCcccHHHHH
Q 031971 52 EECGICLEICCK--IVLPDCNHSMCMRCYR 79 (150)
Q Consensus 52 ~~C~IC~~~~~~--p~~~~CgH~fC~~Ci~ 79 (150)
+.|++|...|.. .++.+=....|+.|..
T Consensus 1 FvC~vCr~pFP~GDRVTFnGKeC~CQ~Cs~ 30 (40)
T d1v6ga2 1 FVCAVCRLPFPPGDRVTFNGKECMCQKCSL 30 (40)
T ss_dssp SSCSSSCCCCCSSSCEEEETTEEEEHHHHS
T ss_pred CcccccCCCCCCCCeEEEcCceeehhhcCC
Confidence 368888887764 3444333346777654
No 55
>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=27.97 E-value=7.2 Score=19.90 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=15.6
Q ss_pred eecCCCCcccHHHHHHHhhCCCCCccccccc
Q 031971 65 VLPDCNHSMCMRCYRNWRARSQSCPFCRDSL 95 (150)
Q Consensus 65 ~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~ 95 (150)
+-+.|||.+-. ..-...||.|..+-
T Consensus 10 ~C~~CGyi~~g------~~aP~~CPvC~~p~ 34 (44)
T d1lkoa2 10 RCRNCGYVHEG------TGAPELCPACAHPK 34 (44)
T ss_dssp EETTTCCEEEE------EECCSBCTTTCCBG
T ss_pred EcCCCCcEEEC------CCCCCcCCCCCCcH
Confidence 34578886532 12346899998764
No 56
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}
Probab=25.17 E-value=15 Score=18.91 Aligned_cols=16 Identities=25% Similarity=0.613 Sum_probs=11.6
Q ss_pred CCCccccccccccccc
Q 031971 48 IEREEECGICLEICCK 63 (150)
Q Consensus 48 ~~~~~~C~IC~~~~~~ 63 (150)
.+...+|+||...+..
T Consensus 21 s~qpatcpic~avirq 36 (54)
T d1yuja_ 21 SEQPATCPICYAVIRQ 36 (54)
T ss_dssp TSCCEECTTTCCEESS
T ss_pred ccCCCCCchHHHHHHH
Confidence 3556789999877664
No 57
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.52 E-value=5.3 Score=22.11 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=26.4
Q ss_pred cccccccccccccc-eec---CCCCcccHHHHHHHh----hCCCCCcccccc
Q 031971 51 EEECGICLEICCKI-VLP---DCNHSMCMRCYRNWR----ARSQSCPFCRDS 94 (150)
Q Consensus 51 ~~~C~IC~~~~~~p-~~~---~CgH~fC~~Ci~~~~----~~~~~CP~Cr~~ 94 (150)
...| ||.....+. .++ .|...||..|+..-. .....||.|+..
T Consensus 16 ~~~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~ 66 (72)
T d1weea_ 16 KVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp EECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred eEEe-eCCCCcCCCCeEEEeCCCCCcCchhhcCCccccCCCCcEECcCCcCc
Confidence 3567 777544333 223 677789999974321 135679999764
No 58
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}
Probab=23.77 E-value=10 Score=26.16 Aligned_cols=11 Identities=18% Similarity=0.495 Sum_probs=9.0
Q ss_pred ccccccccccc
Q 031971 52 EECGICLEICC 62 (150)
Q Consensus 52 ~~C~IC~~~~~ 62 (150)
+.||+|...+.
T Consensus 2 f~CP~C~~~L~ 12 (268)
T d1p91a_ 2 FSCPLCHQPLS 12 (268)
T ss_dssp BBCTTTCCBCE
T ss_pred ccCCCCChhhh
Confidence 67999998765
No 59
>d2j9ub1 g.41.11.1 (B:115-161) Vacuolar protein-sorting-associated protein 36, VPS36 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=23.73 E-value=16 Score=18.61 Aligned_cols=7 Identities=43% Similarity=1.160 Sum_probs=5.3
Q ss_pred ccccccc
Q 031971 53 ECGICLE 59 (150)
Q Consensus 53 ~C~IC~~ 59 (150)
.||||+-
T Consensus 5 ~CPICm~ 11 (47)
T d2j9ub1 5 VCPICMV 11 (47)
T ss_dssp ECTTTCC
T ss_pred ecceeee
Confidence 6888874
No 60
>d2g45a1 g.44.1.5 (A:173-285) Ubiquitin carboxyl-terminal hydrolase 5, UBP5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.60 E-value=19 Score=21.90 Aligned_cols=26 Identities=12% Similarity=0.010 Sum_probs=20.2
Q ss_pred CcccccccccccccceecCCCCcccH
Q 031971 50 REEECGICLEICCKIVLPDCNHSMCM 75 (150)
Q Consensus 50 ~~~~C~IC~~~~~~p~~~~CgH~fC~ 75 (150)
....|..|...-..-+-|.|||..|.
T Consensus 23 ~~~~C~~C~~~~~lWlCL~CG~vgCg 48 (113)
T d2g45a1 23 CGWKCSKCDMRENLWLNLTDGSILCG 48 (113)
T ss_dssp CBCCCSSSSCCSSEEEETTTCCEEEC
T ss_pred CCCcccCCCCcCCEEEEecCCCCccC
Confidence 34579999876655678999999995
No 61
>d1erda_ a.10.1.1 (A:) ER-2 {Euplotes raikovi [TaxId: 5938]}
Probab=20.00 E-value=6.1 Score=18.97 Aligned_cols=15 Identities=33% Similarity=0.930 Sum_probs=12.1
Q ss_pred ecCCCCcccHHHHHH
Q 031971 66 LPDCNHSMCMRCYRN 80 (150)
Q Consensus 66 ~~~CgH~fC~~Ci~~ 80 (150)
..+|.|+.|..|--+
T Consensus 9 mascehtmcgycqgp 23 (40)
T d1erda_ 9 MASCEHTMCGYCQGP 23 (40)
T ss_dssp HHHTCGGGGGGSCHH
T ss_pred HHhccccccccccCC
Confidence 457999999988666
Done!