Your job contains 1 sequence.
>031985
MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY
QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGP
SAIYDFEGIEEEDNDEEEYDSEDAERKEH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031985
(149 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094009 - symbol:AT3G18760 species:3702 "Arabi... 440 1.7e-41 1
POMBASE|SPAC343.08c - symbol:mrp17 "mitochondrial ribosom... 117 2.9e-07 1
CGD|CAL0003691 - symbol:MRP17 species:5476 "Candida albic... 111 1.3e-06 1
GENEDB_PFALCIPARUM|PF14_0606 - symbol:PF14_0606 "hypothet... 93 0.00010 1
UNIPROTKB|Q8IKJ9 - symbol:PF14_0606 "Mitochondrial riboso... 93 0.00010 1
ZFIN|ZDB-GENE-060825-59 - symbol:mrps6 "mitochondrial rib... 93 0.00010 1
TIGR_CMR|GSU_0665 - symbol:GSU_0665 "ribosomal protein S6... 88 0.00035 1
TIGR_CMR|CJE_1213 - symbol:CJE_1213 "ribosomal protein S6... 87 0.00065 1
>TAIR|locus:2094009 [details] [associations]
symbol:AT3G18760 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR000529 Pfam:PF01250 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AB026654 GO:GO:0019843 Gene3D:3.30.70.60 InterPro:IPR014717
SUPFAM:SSF54995 KO:K02990 EMBL:AY088713 EMBL:BT005196 EMBL:AK118083
IPI:IPI00532605 RefSeq:NP_566618.1 UniGene:At.26934
ProteinModelPortal:Q9LSA1 SMR:Q9LSA1 STRING:Q9LSA1 PRIDE:Q9LSA1
EnsemblPlants:AT3G18760.1 GeneID:821407 KEGG:ath:AT3G18760
TAIR:At3g18760 HOGENOM:HOG000015167 InParanoid:Q9LSA1 OMA:LMQITMM
PhylomeDB:Q9LSA1 ProtClustDB:CLSN2688538 ArrayExpress:Q9LSA1
Genevestigator:Q9LSA1 Uniprot:Q9LSA1
Length = 139
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 80/106 (75%), Positives = 95/106 (89%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLL KP +RKE L++LVAR+GKHVY RNGVLT+I SFG V+LGYGI+KLDGR+Y
Sbjct: 1 MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSRNGVLTEIKSFGKVELGYGIRKLDGRHY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEAR 106
QGQLMQ+TMM+TPN+NKEL YLNKED+LLRWLLVKHR +K G+ +
Sbjct: 61 QGQLMQITMMTTPNMNKELHYLNKEDKLLRWLLVKHRDIKIGQSEK 106
>POMBASE|SPAC343.08c [details] [associations]
symbol:mrp17 "mitochondrial ribosomal protein subunit
Mrp17 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR000529 InterPro:IPR020814 Pfam:PF01250
PomBase:SPAC343.08c EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0032543 GO:GO:0019843 GO:GO:0005763
Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54995 eggNOG:COG0360
TIGRFAMs:TIGR00166 PIR:T38657 RefSeq:NP_593428.2 STRING:Q9UT82
EnsemblFungi:SPAC343.08c.1 GeneID:2542478 OrthoDB:EOG49PF84
NextBio:20803533 Uniprot:Q9UT82
Length = 111
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 31/102 (30%), Positives = 48/102 (47%)
Query: 1 MPLYDCMLLLKPHV---RKES---LMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKK 54
M +Y+ + +P R S M + G+ + GV+ D+ S G +L IKK
Sbjct: 1 MVMYELFCITRPAANATRTSSPTLAMNIAKNCGRAILDNKGVVVDVESMGLKELAKPIKK 60
Query: 55 LDGRYYQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVK 95
L+ Y G MT S P + E+Q L E +LR+++VK
Sbjct: 61 LNQSYSFGHWWSMTFYSNPTVQSEIQRILRLEPSVLRYMIVK 102
>CGD|CAL0003691 [details] [associations]
symbol:MRP17 species:5476 "Candida albicans" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000529 Pfam:PF01250 CGD:CAL0003691 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:AACQ01000063
EMBL:AACQ01000062 Gene3D:3.30.70.60 InterPro:IPR014717
SUPFAM:SSF54995 eggNOG:COG0360 TIGRFAMs:TIGR00166
HOGENOM:HOG000206672 RefSeq:XP_716786.1 RefSeq:XP_716846.1
ProteinModelPortal:Q5A4Z9 STRING:Q5A4Z9 GeneID:3641515
GeneID:3641548 KEGG:cal:CaO19.8562 KEGG:cal:CaO19.947
Uniprot:Q5A4Z9
Length = 119
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 16 KESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNI 75
KE+ ++ + VGK + G++ DITS G L I K R++QG + S+PN+
Sbjct: 19 KEAT-KIASTVGKLILNNRGIIRDITSLGAKPLPQIISKEQERHFQGYHFIIGFDSSPNV 77
Query: 76 NKEL-QYLNKEDRLLRWLLVKH 96
+L + L ++ R+LR ++KH
Sbjct: 78 QTQLLRTLRRDPRILRSSIMKH 99
>GENEDB_PFALCIPARUM|PF14_0606 [details] [associations]
symbol:PF14_0606 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00360 InterPro:IPR000529 InterPro:IPR020814 Pfam:PF01250
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AE014187
GO:GO:0019843 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54995
RefSeq:XP_001348780.1 ProteinModelPortal:Q8IKJ9
EnsemblProtists:PF14_0606:mRNA GeneID:812188 KEGG:pfa:PF14_0606
EuPathDB:PlasmoDB:PF3D7_1463800 HOGENOM:HOG000281937 OMA:NHHIHAR
ProtClustDB:CLSZ2431634 Uniprot:Q8IKJ9
Length = 120
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 27/116 (23%), Positives = 54/116 (46%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRY 59
M LY+ + L H++K+ + L+ + NG + I G + + IKK G +
Sbjct: 1 MVLYESYISLNKHIKKDDVRNLMKNFNYIINKHNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 YQGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEAD 114
+ G+ +T S K+L ++ + +LR+L +K + N A ++ +E +
Sbjct: 61 HFGRFYCITFYSNSKSIKDLNEFFHSNTYVLRFLNMKMKYRSNFLVAPFSYVNEIE 116
>UNIPROTKB|Q8IKJ9 [details] [associations]
symbol:PF14_0606 "Mitochondrial ribosomal protein S6-2,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00360 InterPro:IPR000529 InterPro:IPR020814 Pfam:PF01250
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AE014187
GO:GO:0019843 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54995
RefSeq:XP_001348780.1 ProteinModelPortal:Q8IKJ9
EnsemblProtists:PF14_0606:mRNA GeneID:812188 KEGG:pfa:PF14_0606
EuPathDB:PlasmoDB:PF3D7_1463800 HOGENOM:HOG000281937 OMA:NHHIHAR
ProtClustDB:CLSZ2431634 Uniprot:Q8IKJ9
Length = 120
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 27/116 (23%), Positives = 54/116 (46%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRY 59
M LY+ + L H++K+ + L+ + NG + I G + + IKK G +
Sbjct: 1 MVLYESYISLNKHIKKDDVRNLMKNFNYIINKHNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 YQGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEAD 114
+ G+ +T S K+L ++ + +LR+L +K + N A ++ +E +
Sbjct: 61 HFGRFYCITFYSNSKSIKDLNEFFHSNTYVLRFLNMKMKYRSNFLVAPFSYVNEIE 116
>ZFIN|ZDB-GENE-060825-59 [details] [associations]
symbol:mrps6 "mitochondrial ribosomal protein S6"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000529 Pfam:PF01250
ZFIN:ZDB-GENE-060825-59 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54995
TIGRFAMs:TIGR00166 CTD:64968 HOVERGEN:HBG082699 EMBL:BC122263
IPI:IPI00898455 RefSeq:NP_001038921.1 UniGene:Dr.154204
ProteinModelPortal:Q0P459 GeneID:751746 KEGG:dre:751746
InParanoid:Q0P459 NextBio:20917885 ArrayExpress:Q0P459
Uniprot:Q0P459
Length = 118
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP Y+ ++LK R E+ L R + ++ R V+ + + G +L Y I K D R
Sbjct: 1 MPRYELYMVLKAMQRPETAAVL-RRTVETLFERGAVVRSLENLGERKLPYKISKHDSRQS 59
Query: 61 QGQLMQMTMMSTPNI-NKELQYLNKEDRLLRWLLVK 95
G + ++PNI + L +L ++ +LR +VK
Sbjct: 60 HGGYFSIDFHASPNIVSGLLNHLERDVDVLRPTVVK 95
>TIGR_CMR|GSU_0665 [details] [associations]
symbol:GSU_0665 "ribosomal protein S6" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00360
InterPro:IPR000529 InterPro:IPR020814 Pfam:PF01250 PROSITE:PS01048
GO:GO:0006412 GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.70.60 InterPro:IPR014717
SUPFAM:SSF54995 eggNOG:COG0360 KO:K02990 ProtClustDB:PRK00453
TIGRFAMs:TIGR00166 HOGENOM:HOG000040440 OMA:MVESKDW
RefSeq:NP_951722.1 ProteinModelPortal:Q74FE4 GeneID:2685562
KEGG:gsu:GSU0665 PATRIC:22024089 BioCyc:GSUL243231:GH27-684-MONOMER
Uniprot:Q74FE4
Length = 117
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 3 LYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKK-LDGRYYQ 61
+Y+ +++++P + + L L A+V + GVL + +G +L Y +KK + GRYY
Sbjct: 4 MYETIVIVQPELGDDELKGLTAKVTDIIGSFKGVLHRLEDWGVRKLAYPVKKSVRGRYYY 63
Query: 62 GQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVK 95
+ P I + + L +D++LR+ VK
Sbjct: 64 VRFDG----DAPLIAELERRLRLDDKVLRYQSVK 93
>TIGR_CMR|CJE_1213 [details] [associations]
symbol:CJE_1213 "ribosomal protein S6" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] HAMAP:MF_00360 InterPro:IPR000529 InterPro:IPR020814
Pfam:PF01250 PROSITE:PS01048 GO:GO:0006412 GO:GO:0005840
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54995 eggNOG:COG0360
KO:K02990 ProtClustDB:PRK00453 TIGRFAMs:TIGR00166
HOGENOM:HOG000040440 RefSeq:YP_179201.1 ProteinModelPortal:Q5HU34
STRING:Q5HU34 GeneID:3231720 KEGG:cjr:CJE1213 PATRIC:20044222
OMA:MVESKDW BioCyc:CJEJ195099:GJC0-1239-MONOMER Uniprot:Q5HU34
Length = 125
Score = 87 (35.7 bits), Expect = 0.00065, P = 0.00065
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
M Y+ + +LKP + +E + + V K V +N + + GT +L Y IKK Y
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFV-KEVLTKNSAEIETVVPMGTRKLAYKIKK----Y 55
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGMK 100
+G + + N+ EL+ L + ++R+L+VK+ K
Sbjct: 56 ERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKK 97
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 149 125 0.00091 102 3 11 22 0.37 31
29 0.39 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 567 (60 KB)
Total size of DFA: 122 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.53u 0.15s 12.68t Elapsed: 00:00:01
Total cpu time: 12.53u 0.15s 12.68t Elapsed: 00:00:01
Start: Fri May 10 10:01:13 2013 End: Fri May 10 10:01:14 2013