BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031985
(149 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|313586453|gb|ADR71237.1| 30S ribosomal protein S6A [Hevea brasiliensis]
Length = 163
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 107/140 (76%), Gaps = 24/140 (17%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLLLKPHVRKE+LM+LVARVGKHVYGRNGVLTDI SFGT+QLGYGIKKLDGRYY
Sbjct: 1 MPLYDCMLLLKPHVRKEALMDLVARVGKHVYGRNGVLTDIKSFGTIQLGYGIKKLDGRYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGP 120
QGQLMQMTMM+TPNINKEL YLNKEDRLLRWLLVKHR NG E
Sbjct: 61 QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTTNGLE---------------- 104
Query: 121 SAIYDFEGIEEEDNDEEEYD 140
EEDND+EE D
Sbjct: 105 --------FLEEDNDKEELD 116
>gi|313586455|gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]
Length = 163
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 106/140 (75%), Gaps = 24/140 (17%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLLLKPHVRKE+LM+LVARVGKHVY RNGVLTDI SFGT+QLGYGIKKLDGRYY
Sbjct: 1 MPLYDCMLLLKPHVRKEALMDLVARVGKHVYARNGVLTDIKSFGTIQLGYGIKKLDGRYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGP 120
QGQLMQMTMM+TPNINKEL YLNKEDRLLRWLLVKHR +G E
Sbjct: 61 QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTTDGLE---------------- 104
Query: 121 SAIYDFEGIEEEDNDEEEYD 140
EEDND+EE D
Sbjct: 105 --------FLEEDNDKEELD 116
>gi|225463002|ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256785 [Vitis vinifera]
Length = 162
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP YDCMLLLKPHV KESLM+LVARVGKHVY RNGVLTDI SFG V+LGYGIKKLDGRYY
Sbjct: 1 MPFYDCMLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFGIVRLGYGIKKLDGRYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGP 120
QGQLMQM+MM+TPN NKEL YLNKEDRLLRWLLVKHR K G E + ++L K+
Sbjct: 61 QGQLMQMSMMATPNFNKELHYLNKEDRLLRWLLVKHRNTKYGLEFLNEDDVRSELSKFPR 120
Query: 121 SAIY 124
S ++
Sbjct: 121 STLF 124
>gi|224144016|ref|XP_002325157.1| predicted protein [Populus trichocarpa]
gi|222866591|gb|EEF03722.1| predicted protein [Populus trichocarpa]
Length = 136
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/102 (87%), Positives = 97/102 (95%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCML+LKPHVRKE+LM+LVARVGKHVY RNGV+TDI SFGTVQLGYGIKKLDGR+Y
Sbjct: 1 MPLYDCMLMLKPHVRKEALMDLVARVGKHVYSRNGVVTDIKSFGTVQLGYGIKKLDGRHY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNG 102
QGQLMQ+TMM+TPNINKEL YLNKEDRLLRWLLVKHR +K G
Sbjct: 61 QGQLMQITMMATPNINKELHYLNKEDRLLRWLLVKHRDIKFG 102
>gi|255565089|ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223537244|gb|EEF38876.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 162
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 100/124 (80%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLLLKPH+ KE++++LVARVGKHV RNGVLTD+ SFGT+QLGYGIKK + RY+
Sbjct: 1 MPLYDCMLLLKPHIHKEAVIDLVARVGKHVQSRNGVLTDMKSFGTIQLGYGIKKRENRYF 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGP 120
QGQLMQMTMM+TPNINKEL YLNKEDRLLRWLLVKHR K G + + +L K P
Sbjct: 61 QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTKYGLDFMDENDGKGELNKLSP 120
Query: 121 SAIY 124
S +
Sbjct: 121 SKYW 124
>gi|18401997|ref|NP_566618.1| small subunit ribosomal protein S6 [Arabidopsis thaliana]
gi|9293899|dbj|BAB01802.1| unnamed protein product [Arabidopsis thaliana]
gi|21617981|gb|AAM67031.1| unknown [Arabidopsis thaliana]
gi|26451219|dbj|BAC42712.1| unknown protein [Arabidopsis thaliana]
gi|28827770|gb|AAO50729.1| unknown protein [Arabidopsis thaliana]
gi|332642621|gb|AEE76142.1| small subunit ribosomal protein S6 [Arabidopsis thaliana]
Length = 139
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLL KP +RKE L++LVAR+GKHVY RNGVLT+I SFG V+LGYGI+KLDGR+Y
Sbjct: 1 MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSRNGVLTEIKSFGKVELGYGIRKLDGRHY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGP 120
QGQLMQ+TMM+TPN+NKEL YLNKED+LLRWLLVKHR +K G+ + E S +
Sbjct: 61 QGQLMQITMMTTPNMNKELHYLNKEDKLLRWLLVKHRDIKIGQSEK--EDSLTVPNRLTS 118
Query: 121 SAIYDFEGIEEEDND 135
++YD +E+DN+
Sbjct: 119 GSLYDGSSSDEDDNN 133
>gi|296084586|emb|CBI25607.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 97/118 (82%)
Query: 7 MLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQ 66
MLLLKPHV KESLM+LVARVGKHVY RNGVLTDI SFG V+LGYGIKKLDGRYYQGQLMQ
Sbjct: 1 MLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFGIVRLGYGIKKLDGRYYQGQLMQ 60
Query: 67 MTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGPSAIY 124
M+MM+TPN NKEL YLNKEDRLLRWLLVKHR K G E + ++L K+ S ++
Sbjct: 61 MSMMATPNFNKELHYLNKEDRLLRWLLVKHRNTKYGLEFLNEDDVRSELSKFPRSTLF 118
>gi|297834792|ref|XP_002885278.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297331118|gb|EFH61537.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 139
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 98/114 (85%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLL KP +RKE L++LVAR+GKHVY RNGVLT+I SFG V+LGYGI+KLDGR+Y
Sbjct: 1 MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSRNGVLTEIKSFGKVELGYGIRKLDGRHY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEAD 114
QGQLMQ+TMM+TPN+NKEL YLNKED+LLRWLLVKHR +K G+ + +E +
Sbjct: 61 QGQLMQITMMTTPNMNKELHYLNKEDKLLRWLLVKHRDIKIGQLEKEVSLTEPN 114
>gi|449529120|ref|XP_004171549.1| PREDICTED: 37S ribosomal protein MRP17, mitochondrial-like [Cucumis
sativus]
Length = 153
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 93/104 (89%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYD M L+KPHV+KE+L++LVARVGKHV+ RNGV+ DI SFG VQLGYGIKKLDGRYY
Sbjct: 1 MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKE 104
QGQLMQMTMM+TPN+NKEL YLNKEDRLLRW+LVKHR + G E
Sbjct: 61 QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLE 104
>gi|449463238|ref|XP_004149341.1| PREDICTED: LOW QUALITY PROTEIN: 37S ribosomal protein MRP17,
mitochondrial-like [Cucumis sativus]
Length = 140
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 95/107 (88%), Gaps = 4/107 (3%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYD M L+KPHV+KE+L++LVARVGKHV+ RNGV+ DI SFG VQLGYGIKKLDGRYY
Sbjct: 1 MPLYDVMFLMKPHVKKEALLDLVARVGKHVFRRNGVVCDIKSFGVVQLGYGIKKLDGRYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHR----GMKNGK 103
QGQLMQMTMM+TPN+NKEL YLNKEDRLLRW+LVKHR G+KN +
Sbjct: 61 QGQLMQMTMMATPNMNKELFYLNKEDRLLRWILVKHRDRQFGLKNCR 107
>gi|388497172|gb|AFK36652.1| unknown [Lotus japonicus]
Length = 149
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/118 (68%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP YDCMLL KPHV KE+L++LV RVGKHVY RNGV+TDI S+G + LGYGIKKLDGR+Y
Sbjct: 1 MPPYDCMLLFKPHVEKEALIDLVTRVGKHVYRRNGVVTDIKSYGMIHLGYGIKKLDGRFY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKY 118
QGQ+MQ++MM+TP INKEL YLNKEDRLLRWLLVKHR G + AE +L K+
Sbjct: 61 QGQMMQLSMMATPQINKELHYLNKEDRLLRWLLVKHRNTSFGLDF-LAEEGGQELSKF 117
>gi|351722084|ref|NP_001235696.1| uncharacterized protein LOC100500532 [Glycine max]
gi|255630573|gb|ACU15646.1| unknown [Glycine max]
Length = 144
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 96/124 (77%), Gaps = 5/124 (4%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP YDCM L KPH+RKE++M+LV RVGKHV RNGV+TDI S G VQLGYG+KKLDGRYY
Sbjct: 1 MPPYDCMFLFKPHIRKEAVMDLVVRVGKHVCRRNGVVTDIKSLGKVQLGYGVKKLDGRYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEA-----RYAETSEADL 115
QG LMQM+MM+TP INKEL YLNKEDRLLRWLLVK R K G ++ RY + + +
Sbjct: 61 QGLLMQMSMMATPEINKELHYLNKEDRLLRWLLVKQRNTKFGLDSYGDGGRYELSKLSQI 120
Query: 116 KKYG 119
K+G
Sbjct: 121 GKHG 124
>gi|351724233|ref|NP_001235771.1| uncharacterized protein LOC100305721 [Glycine max]
gi|255626419|gb|ACU13554.1| unknown [Glycine max]
Length = 144
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 94/124 (75%), Gaps = 5/124 (4%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP YDCM L KPH+RKE++M+LV RVGKHV RNGV+ DI S G VQLGYG+KKLDGRYY
Sbjct: 1 MPPYDCMFLFKPHIRKEAVMDLVVRVGKHVCRRNGVVIDIKSLGRVQLGYGVKKLDGRYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKN-----GKEARYAETSEADL 115
QG LMQM+MM+TP INKEL YLNKEDRLLRWLLVK R K G E RY + + +
Sbjct: 61 QGLLMQMSMMATPEINKELHYLNKEDRLLRWLLVKQRNTKFGLDSYGDEGRYELSKFSQI 120
Query: 116 KKYG 119
K+G
Sbjct: 121 GKHG 124
>gi|145332631|ref|NP_001078181.1| small subunit ribosomal protein S6 [Arabidopsis thaliana]
gi|332642622|gb|AEE76143.1| small subunit ribosomal protein S6 [Arabidopsis thaliana]
Length = 134
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 103/135 (76%), Gaps = 7/135 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLL KP +RKE L++LVAR+GKHVY RNGVLT+I SFG V+LGYGI+KLDGR+Y
Sbjct: 1 MPLYDCMLLFKPIIRKEGLIDLVARIGKHVYSRNGVLTEIKSFGKVELGYGIRKLDGRHY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGP 120
Q+TMM+TPN+NKEL YLNKED+LLRWLLVKHR +K G+ + E S +
Sbjct: 61 -----QITMMTTPNMNKELHYLNKEDKLLRWLLVKHRDIKIGQSEK--EDSLTVPNRLTS 113
Query: 121 SAIYDFEGIEEEDND 135
++YD +E+DN+
Sbjct: 114 GSLYDGSSSDEDDNN 128
>gi|217075210|gb|ACJ85965.1| unknown [Medicago truncatula]
Length = 145
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 90/104 (86%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP YDCMLL KP+V+KE+L+ LVAR+GKHV RNGV+T++ SFGTVQLGYG+KK DGR+Y
Sbjct: 1 MPPYDCMLLFKPNVKKEALISLVARIGKHVCKRNGVVTEVKSFGTVQLGYGVKKRDGRFY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKE 104
QGQ+MQ++MM+TP INKEL YLNKED+LLRWLLVK R K G E
Sbjct: 61 QGQMMQVSMMATPEINKELHYLNKEDKLLRWLLVKQRDTKFGLE 104
>gi|388513927|gb|AFK45025.1| unknown [Medicago truncatula]
Length = 144
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 90/104 (86%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP YDCMLL KP+V+KE+L+ LV+R+GKHV RNGV+T++ SFGT+QLGYG+KK DGR+Y
Sbjct: 1 MPPYDCMLLFKPNVKKEALIGLVSRIGKHVCKRNGVVTEVKSFGTIQLGYGVKKRDGRFY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKE 104
QGQ+MQ++MM+TP INKEL YLNKED+LLRWLLVK R K G E
Sbjct: 61 QGQMMQVSMMATPEINKELHYLNKEDKLLRWLLVKQRDTKIGLE 104
>gi|357128010|ref|XP_003565669.1| PREDICTED: uncharacterized protein LOC100840407 [Brachypodium
distachyon]
Length = 146
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 83/104 (79%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLL+KP V KE++ ELV RV Y RNGV+T++ SFG V LGYGIKKLDGR++
Sbjct: 1 MPLYDCMLLVKPMVTKEAVAELVTRVAGRAYQRNGVVTELKSFGKVHLGYGIKKLDGRHF 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKE 104
QGQLMQMTMM P+ KELQYLNKEDRLLRWL+VKHR G E
Sbjct: 61 QGQLMQMTMMVPPSFTKELQYLNKEDRLLRWLVVKHRDAVYGLE 104
>gi|115435334|ref|NP_001042425.1| Os01g0220300 [Oryza sativa Japonica Group]
gi|8096641|dbj|BAA96212.1| unknown protein [Oryza sativa Japonica Group]
gi|113531956|dbj|BAF04339.1| Os01g0220300 [Oryza sativa Japonica Group]
gi|215740466|dbj|BAG97122.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 146
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/104 (67%), Positives = 84/104 (80%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLL+KP V +E++ ELV RV + Y RNGV+TD+ SFGT+ LGYGIKKLDGR++
Sbjct: 1 MPLYDCMLLVKPLVTREAMAELVGRVARRAYQRNGVVTDVKSFGTICLGYGIKKLDGRHF 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKE 104
+GQLMQMTMM P+ +EL YLNKEDRLLRWL+VKHR G E
Sbjct: 61 KGQLMQMTMMVPPSFTQELHYLNKEDRLLRWLVVKHRDAVYGVE 104
>gi|326533654|dbj|BAK05358.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/104 (67%), Positives = 83/104 (79%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCML++KP V KE++ ELVARV Y RNGV+TD+ SFG V LGYGI+KLDGR++
Sbjct: 1 MPLYDCMLMVKPMVTKEAIAELVARVAARAYQRNGVVTDLKSFGKVHLGYGIRKLDGRHF 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKE 104
QGQL+QMTMM P+ +EL YLNKEDRLLRWL+VKHR G E
Sbjct: 61 QGQLLQMTMMVPPSFTQELHYLNKEDRLLRWLVVKHRDAVYGLE 104
>gi|242055939|ref|XP_002457115.1| hypothetical protein SORBIDRAFT_03g001540 [Sorghum bicolor]
gi|241929090|gb|EES02235.1| hypothetical protein SORBIDRAFT_03g001540 [Sorghum bicolor]
Length = 162
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 89/130 (68%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLL+KP V +E + +LV RV + RNGV+TD+ SFG V LGYGIKKLDGR++
Sbjct: 1 MPLYDCMLLVKPTVTREVVADLVTRVARRACQRNGVVTDVKSFGKVNLGYGIKKLDGRHF 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGP 120
QGQLMQMTMM P+ +EL YLNKEDRLLRWL+VKHR G E + +L Y
Sbjct: 61 QGQLMQMTMMVPPSFPQELHYLNKEDRLLRWLVVKHRDAVYGLEFINEDDGRNELSGYSQ 120
Query: 121 SAIYDFEGIE 130
+ D IE
Sbjct: 121 AHTKDDYDIE 130
>gi|226508136|ref|NP_001143791.1| uncharacterized protein LOC100276559 [Zea mays]
gi|195627110|gb|ACG35385.1| hypothetical protein [Zea mays]
Length = 163
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 84/118 (71%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLLLK V +E L ELV RV + RNGV+TD+ SFG V L YGI+KLDGR++
Sbjct: 1 MPLYDCMLLLKTTVTREVLAELVTRVARRACQRNGVVTDVKSFGKVSLAYGIRKLDGRHF 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKY 118
QG LMQMTMM P+ +EL YLNKEDRLLRWL+VKHR G E A+ +L+ +
Sbjct: 61 QGHLMQMTMMVPPSFPQELHYLNKEDRLLRWLVVKHRDTVYGLEFLNADGGRDELRSF 118
>gi|395146551|gb|AFN53704.1| putative secretory carrier membrane protein [Linum usitatissimum]
Length = 418
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 84/107 (78%)
Query: 12 PHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMS 71
P V + S+M L+ R+G HV RNGV+T++ SFGT+QLGYGIKKLDGR+++GQL+QMTMM+
Sbjct: 275 PQVDRTSIMSLMTRIGNHVATRNGVVTEVKSFGTIQLGYGIKKLDGRFFKGQLVQMTMMA 334
Query: 72 TPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKY 118
TPN+NKEL YLNKEDRLLRWLL KHR ++ +T + LKKY
Sbjct: 335 TPNMNKELHYLNKEDRLLRWLLTKHRNTVYSRDDYDEDTGKNGLKKY 381
>gi|218187764|gb|EEC70191.1| hypothetical protein OsI_00930 [Oryza sativa Indica Group]
gi|222617997|gb|EEE54129.1| hypothetical protein OsJ_00911 [Oryza sativa Japonica Group]
Length = 179
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 84/137 (61%), Gaps = 33/137 (24%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRY- 59
MPLYDCMLL+KP V +E++ ELV RV + Y RNGV+TD+ SFGT+ LGYGIKKLDGR+
Sbjct: 1 MPLYDCMLLVKPLVTREAMAELVGRVARRAYQRNGVVTDVKSFGTICLGYGIKKLDGRHF 60
Query: 60 --------------------------------YQGQLMQMTMMSTPNINKELQYLNKEDR 87
++GQLMQMTMM P+ +EL YLNKEDR
Sbjct: 61 KEYQDYSGWVAQKNRCAAVNGLFALNNITLDSFEGQLMQMTMMVPPSFTQELHYLNKEDR 120
Query: 88 LLRWLLVKHRGMKNGKE 104
LLRWL+VKHR G E
Sbjct: 121 LLRWLVVKHRDAVYGVE 137
>gi|294464375|gb|ADE77700.1| unknown [Picea sitchensis]
Length = 158
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 86/104 (82%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLLLKP V + +++ELVAR+G+ V+ NGV+TDI SFG V LGYGIKKLDGR+Y
Sbjct: 1 MPLYDCMLLLKPKVERTAIIELVARLGRRVHSLNGVVTDIKSFGKVYLGYGIKKLDGRFY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKE 104
QGQ+MQMTMM TP KEL+YLNK+DRLLRWLLVK+R G E
Sbjct: 61 QGQMMQMTMMVTPKFPKELEYLNKDDRLLRWLLVKYRDTSYGLE 104
>gi|116779187|gb|ABK21174.1| unknown [Picea sitchensis]
Length = 163
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYDCMLLLKP V + +++EL++R+G+ VY NGV+TDI SFG V LGYGI+KLDGRYY
Sbjct: 1 MPLYDCMLLLKPQVERAAIVELLSRLGRRVYSLNGVVTDIKSFGKVYLGYGIRKLDGRYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADL-KKYG 119
QGQ+MQMTMM TP +KEL+YLNK+D+LLRWLLVK+R G E S KY
Sbjct: 61 QGQMMQMTMMVTPKFHKELEYLNKDDKLLRWLLVKYRDTSYGLEFVNESDSRGSFYNKYA 120
Query: 120 PSAIY 124
S ++
Sbjct: 121 NSDLF 125
>gi|168017341|ref|XP_001761206.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687546|gb|EDQ73928.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 83/108 (76%), Gaps = 3/108 (2%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYD ++++KP V + L+EL+ R+G+ VY RNGV+T+I SFG V L YGI+K DGR++
Sbjct: 1 MPLYDFVVMVKPAVDRRGLVELMKRLGERVYSRNGVVTNIKSFGRVNLAYGIRKRDGRFF 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRG---MKNGKEA 105
+GQ+MQM++M P +EL +LNK++RLLRW+L+K+RG K GKE
Sbjct: 61 EGQMMQMSIMVPPAFPQELNFLNKDERLLRWMLIKNRGNNWSKVGKET 108
>gi|302789920|ref|XP_002976728.1| hypothetical protein SELMODRAFT_105261 [Selaginella moellendorffii]
gi|300155766|gb|EFJ22397.1| hypothetical protein SELMODRAFT_105261 [Selaginella moellendorffii]
Length = 123
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 73/100 (73%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYD ++ KP V ++ + +++ R+G VY + GV+TD+ FG L Y IKK DGR+Y
Sbjct: 1 MPLYDVFVIFKPLVERKVMTDILVRIGHKVYQQKGVVTDVKYFGRQFLAYDIKKRDGRHY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMK 100
+G LMQMT+M+ N++LQYLN ++RLLRWLL+K+RG K
Sbjct: 61 EGHLMQMTVMAATAFNEQLQYLNNDERLLRWLLIKNRGTK 100
>gi|302782710|ref|XP_002973128.1| hypothetical protein SELMODRAFT_99143 [Selaginella moellendorffii]
gi|300158881|gb|EFJ25502.1| hypothetical protein SELMODRAFT_99143 [Selaginella moellendorffii]
Length = 123
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 73/100 (73%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYD ++ KP V ++ + +++ R+G VY + GV+T++ FG L Y IKK DGR+Y
Sbjct: 1 MPLYDVFVIFKPLVERKVMTDILVRIGHKVYQQKGVVTNVKYFGRQFLAYDIKKRDGRHY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMK 100
+G LMQMT+M+ N++LQYLN ++RLLRWLL+K+RG K
Sbjct: 61 EGHLMQMTVMAATAFNEQLQYLNNDERLLRWLLIKNRGTK 100
>gi|255084283|ref|XP_002508716.1| predicted protein [Micromonas sp. RCC299]
gi|226523993|gb|ACO69974.1| predicted protein [Micromonas sp. RCC299]
Length = 160
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M LY+ M+++K + L +++ R G V GV+TDITSFGT L Y K R++
Sbjct: 1 MVLYELMVMVKSATPRAQLADILRRAGTRVLDAGGVITDITSFGTRPLAYEFKSPGERHF 60
Query: 61 QGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHRGMK 100
+ ++Q++ S P + +++++ + ++R+LRW+ VK + ++
Sbjct: 61 EAHMVQISFNSAPTLIEDMKHDMRTDERVLRWIAVKKKALR 101
>gi|412992365|emb|CCO20078.1| predicted protein [Bathycoccus prasinos]
Length = 145
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLYD +L +K V K + EL+ R + +GVL D+ SFG L Y KK + R++
Sbjct: 1 MPLYDLVLQVKARVPKREVFELLKRTSLKILDSDGVLMDVKSFGHQTLAYVYKKPNERHH 60
Query: 61 QGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHR 97
+ Q+ QMT S PN+ E+ + L +++++RW+++K +
Sbjct: 61 EVQMSQMTFASAPNVLPEISHALRVDEKVVRWMVLKRK 98
>gi|357486385|ref|XP_003613480.1| Receptor protein kinase-like protein [Medicago truncatula]
gi|355514815|gb|AES96438.1| Receptor protein kinase-like protein [Medicago truncatula]
Length = 450
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/40 (72%), Positives = 34/40 (85%)
Query: 62 GQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKN 101
GQ+MQ++MM+TP INKEL YLNKED+LLRWLLVK KN
Sbjct: 409 GQMMQVSMMATPEINKELHYLNKEDKLLRWLLVKQARHKN 448
>gi|414875691|tpg|DAA52822.1| TPA: hypothetical protein ZEAMMB73_130741 [Zea mays]
Length = 135
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 59 YYQGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKY 118
+ QG LMQMTMM P+ +EL YLNKEDRLLRWL+VKHR G E A+ +L+ +
Sbjct: 30 HLQGHLMQMTMMVPPSFPQELHYLNKEDRLLRWLVVKHRDTVYGLEFLNADGGRDELRSF 89
>gi|145341069|ref|XP_001415638.1| Putative mitochondrial ribosomal protein S6 [Ostreococcus
lucimarinus CCE9901]
gi|144575861|gb|ABO93930.1| Putative mitochondrial ribosomal protein S6 [Ostreococcus
lucimarinus CCE9901]
Length = 126
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M LYD M+++ V K + +++ R+G V GV+T++ S+G L Y ++ +++
Sbjct: 1 MVLYDAMIVVSAKVPKTACADVLRRLGASVMDAGGVVTNVASYGARTLAYEFRRPGEKHF 60
Query: 61 QGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGMK 100
+ Q ++M+ + P + E + L ++R+LRW++ K R M+
Sbjct: 61 EAQFVKMSFNAPPTLVAEAERTLRIDERVLRWVITKKRAMR 101
>gi|307108495|gb|EFN56735.1| hypothetical protein CHLNCDRAFT_144161 [Chlorella variabilis]
Length = 143
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLY+ L KP + K+++ ++ V V + GV+TDI S+G +L Y I++ R+
Sbjct: 1 MPLYELFALAKPQLGKKAIASIMKAVASKVMEQGGVVTDIRSYGERKLAYDIRQPGVRHK 60
Query: 61 QGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHRGMKNG----KEARYAETSEADL 115
+ + Q+ + P EL + L ++R+LRWL++K + + + AR AE L
Sbjct: 61 EAAMWQINFAANPATLPELDHTLRVDERMLRWLVLKRQPYRRLPTPYRVARIAEDVAVPL 120
Query: 116 -KKYGP 120
K+ GP
Sbjct: 121 AKQQGP 126
>gi|159489677|ref|XP_001702823.1| mitochondrial ribosomal protein S6 [Chlamydomonas reinhardtii]
gi|158271040|gb|EDO96868.1| mitochondrial ribosomal protein S6 [Chlamydomonas reinhardtii]
Length = 122
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLY+ ++L KP + + ++ L+ +G VY G +T + SFG L Y +++ +Y
Sbjct: 1 MPLYELLMLAKPSLPRAEMVALIKGLGDLVYRNGGFVTSLKSFGDQHLAYDLRRPFEKYD 60
Query: 61 QGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVK 95
+ + QM +S+ + K L + L+ + +LRW+LVK
Sbjct: 61 RAHIWQMDFVSSVDAIKPLDHGLHVNNTVLRWVLVK 96
>gi|384247780|gb|EIE21266.1| mitochondrial ribosomal protein S6, partial [Coccomyxa
subellipsoidea C-169]
Length = 97
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLY+ + +P + + +L+ V + G+LTDI S+G +L Y I++ +
Sbjct: 1 MPLYELFCMARPALARTEASQLMRNAASAVLSKGGLLTDIKSYGQRELAYEIRRPGMKIN 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVKH 96
+ + Q+ + P + K+L++L K +DR++R+++++
Sbjct: 61 EAFMWQLDFAAAPPVLKDLEHLLKVDDRVVRYVILRR 97
>gi|429242121|ref|NP_593428.2| mitochondrial ribosomal protein subunit Mrp17 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|384872630|sp|Q9UT82.2|RT06_SCHPO RecName: Full=37S ribosomal protein MRP17, mitochondrial
gi|347834086|emb|CAB52271.2| mitochondrial ribosomal protein subunit Mrp17 (predicted)
[Schizosaccharomyces pombe]
Length = 111
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 20 MELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNINKEL 79
M + G+ + GV+ D+ S G +L IKKL+ Y G MT S P + E+
Sbjct: 26 MNIAKNCGRAILDNKGVVVDVESMGLKELAKPIKKLNQSYSFGHWWSMTFYSNPTVQSEI 85
Query: 80 Q-YLNKEDRLLRWLLVK 95
Q L E +LR+++VK
Sbjct: 86 QRILRLEPSVLRYMIVK 102
>gi|290999713|ref|XP_002682424.1| predicted protein [Naegleria gruberi]
gi|284096051|gb|EFC49680.1| predicted protein [Naegleria gruberi]
Length = 169
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLY+ + L+ P ++ +++ R + V+ GV+ + + G + L Y + + +++
Sbjct: 1 MPLYELVYLVNPKAALPTVAQVMKRNAQVVFENKGVIRRLDNMGILPLAYPMYRHREKHF 60
Query: 61 QGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHR 97
+G+ + M ++P KEL + + K+ ++ RW K +
Sbjct: 61 KGRWVMMLFDASPTCVKELNEQMRKDQQIFRWACYKQK 98
>gi|303287432|ref|XP_003063005.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455641|gb|EEH52944.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 200
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M LYD + +K V + + +++ ++G V GV+TDITSFGT L Y I+K
Sbjct: 1 MVLYDMFIAVKSTVPRSQMADVLRKMGHRVLDAGGVITDITSFGTQTLAYQIRK------ 54
Query: 61 QGQ 63
QGQ
Sbjct: 55 QGQ 57
>gi|448531837|ref|XP_003870340.1| Mrp17 protein [Candida orthopsilosis Co 90-125]
gi|380354694|emb|CCG24210.1| Mrp17 protein [Candida orthopsilosis]
Length = 118
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 13 HVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMST 72
HV KE+ ++ + VGK + G++ DITS G L I K R++QG M S+
Sbjct: 16 HVTKEA-TKIASTVGKLILNNRGIVRDITSLGAKPLPKIISKEQERHFQGYHFLMGFDSS 74
Query: 73 PNINKE-LQYLNKEDRLLRWLLVKHRGMKN 101
+ + L+ L K+ R+LR ++KH KN
Sbjct: 75 SKVQAQLLRTLRKDPRILRASIIKHDLRKN 104
>gi|354544694|emb|CCE41420.1| hypothetical protein CPAR2_304090 [Candida parapsilosis]
Length = 118
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 13 HVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMST 72
HV KE+ ++ + VGK + G++ DITS G L I K R++QG M S+
Sbjct: 16 HVTKEA-TKIASTVGKLILNNRGIIRDITSLGAKPLPKIISKEQERHFQGYHFLMGFDSS 74
Query: 73 PNINKE-LQYLNKEDRLLRWLLVKH 96
+ + L+ L K+ R+LR ++KH
Sbjct: 75 SKVQAQLLRTLRKDPRILRASIIKH 99
>gi|255732079|ref|XP_002550963.1| mitochondrial 40S ribosomal protein MRP17 [Candida tropicalis
MYA-3404]
gi|240131249|gb|EER30809.1| mitochondrial 40S ribosomal protein MRP17 [Candida tropicalis
MYA-3404]
Length = 120
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 21 ELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNINKE-L 79
++ + VGK + GV+ DI+S G L I K R++QG M +PN+ + L
Sbjct: 23 KIASTVGKLILNNRGVIRDISSLGARPLPKIISKEQERHFQGYHFIMGFDCSPNVQTQLL 82
Query: 80 QYLNKEDRLLRWLLVKHRGMKN 101
+ L ++ R+LR ++KH KN
Sbjct: 83 RTLRRDPRILRSSIMKHDLTKN 104
>gi|242211783|ref|XP_002471728.1| predicted protein [Postia placenta Mad-698-R]
gi|220729154|gb|EED83033.1| predicted protein [Postia placenta Mad-698-R]
Length = 115
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP Y + + + + + ELV + HV + GV+ + S+GT+ L +++ +
Sbjct: 1 MPFYQMLCITAHYPEYKHIKELVQQTAMHVMNKGGVVRRLNSWGTLPLPQRMRRHQAYHQ 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKED-RLLRWLLVK 95
G M ++P KEL L K D R++RW ++K
Sbjct: 61 IGDYWTMHFDASPRTLKELDSLMKRDPRVVRWTMLK 96
>gi|68478209|ref|XP_716846.1| likely mitochondrial ribosomal protein (E. coli LS6) [Candida
albicans SC5314]
gi|68478330|ref|XP_716786.1| likely mitochondrial ribosomal protein (E. coli LS6) [Candida
albicans SC5314]
gi|241955257|ref|XP_002420349.1| mitochondrial 37S ribosomal protein YmS16 [Candida dubliniensis
CD36]
gi|46438469|gb|EAK97799.1| likely mitochondrial ribosomal protein (E. coli LS6) [Candida
albicans SC5314]
gi|46438531|gb|EAK97860.1| likely mitochondrial ribosomal protein (E. coli LS6) [Candida
albicans SC5314]
gi|223643691|emb|CAX41425.1| mitochondrial ribosomal protein, small subunit, putative [Candida
dubliniensis CD36]
gi|238882454|gb|EEQ46092.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 119
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 ELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNINKE-L 79
++ + VGK + G++ DITS G L I K R++QG + S+PN+ + L
Sbjct: 23 KIASTVGKLILNNRGIIRDITSLGAKPLPQIISKEQERHFQGYHFIIGFDSSPNVQTQLL 82
Query: 80 QYLNKEDRLLRWLLVKH 96
+ L ++ R+LR ++KH
Sbjct: 83 RTLRRDPRILRSSIMKH 99
>gi|20809110|ref|NP_624281.1| 30S ribosomal protein S6 [Thermoanaerobacter tengcongensis MB4]
gi|24212292|sp|Q8R6M1.1|RS6_THETN RecName: Full=30S ribosomal protein S6
gi|20517788|gb|AAM25885.1| Ribosomal protein S6 [Thermoanaerobacter tengcongensis MB4]
Length = 95
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +L P + +E L+ R + R G +T+ +G +L Y I+K YY
Sbjct: 1 MRSYETMYVLSPDLNEEERKGLIERFKNLIVERGGEITNFDEWGKRKLAYPIQKKSEGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M S+P++++EL+ + + D +LR+L+++
Sbjct: 61 ----VLMNFNSSPDVSRELERVYRITDGVLRYLIIR 92
>gi|385303213|gb|EIF47302.1| mrp17p [Dekkera bruxellensis AWRI1499]
Length = 126
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 21 ELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNINKE-L 79
EL + +GK V NGV+ +I S G L +KK + R++QG M S+ + +E L
Sbjct: 23 ELASTIGKLVIKNNGVVREIVSLGAKPLPKLMKKANERHFQGSHFLMLFDSSSAVQREIL 82
Query: 80 QYLNKEDRLLRWLLVK 95
+ L + R++R L++
Sbjct: 83 RSLKNDPRVIRSNLIR 98
>gi|312144684|ref|YP_003996130.1| 30S ribosomal protein S6 [Halanaerobium hydrogeniformans]
gi|311905335|gb|ADQ15776.1| ribosomal protein S6 [Halanaerobium hydrogeniformans]
Length = 99
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ +LKP + E +++ RV + +G +T++ ++G QL Y IK Y G
Sbjct: 8 YETTFVLKPDLEDEEKEQILTRVKNTILDHDGEITEVDAWGKRQLAYEIKD----YRSGD 63
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M + ++ KEL+ + K D ++R+L+VK
Sbjct: 64 YTILEMNAKTSVVKELERIFKIMDGVIRYLVVK 96
>gi|239828696|ref|YP_002951320.1| 30S ribosomal protein S6 [Geobacillus sp. WCH70]
gi|259495336|sp|C5D9X6.1|RS6_GEOSW RecName: Full=30S ribosomal protein S6
gi|239808989|gb|ACS26054.1| ribosomal protein S6 [Geobacillus sp. WCH70]
Length = 95
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +++P++ E+ +V R + +T++T +G +L Y IKK Y
Sbjct: 1 MRKYEIMYIIRPNLDDEARQAVVDRFNNILKENGAEITNVTDWGKRRLAYEIKK----YR 56
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
G M + ++S P +E L + D ++R ++VK
Sbjct: 57 DGHYMILNVVSEPKAVQEFDRLARISDDIIRHIVVK 92
>gi|406934525|gb|EKD68794.1| 30S ribosomal protein S6 [uncultured bacterium]
Length = 108
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+CM+LL P + + +++A+V + + VL +G +L Y IKK++ YY
Sbjct: 1 MKAYECMVLLDPTFNETDIEKMIAKVEEQIQKSGNVLETTNRWGKRKLAYEIKKVNEAYY 60
>gi|392569835|gb|EIW63008.1| ribosomal protein S6 [Trametes versicolor FP-101664 SS1]
Length = 115
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP Y + + + + +LV R HV GV+ + S+GT L +++ +
Sbjct: 1 MPFYQLVCIAAHYPEYRHIKDLVTRAASHVLDNGGVVRKLDSWGTQTLPQRMRRAKVYHQ 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKED-RLLRWLLVK 95
G M ++P +EL + + D R++RW +K
Sbjct: 61 IGDYWTMQFDASPTTLRELNNIMRHDPRVIRWTALK 96
>gi|452821271|gb|EME28303.1| hypothetical protein Gasu_41510 [Galdieria sulphuraria]
Length = 180
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP Y+ L + + ++ L + V + + + +GV+T I + +L Y I + RY
Sbjct: 1 MPYYELFCLFRTDLPRQELFQSVKKTAERLMDADGVITRIDPLASRELAYDIVRKGVRYE 60
Query: 61 QGQLMQMTMMSTP-NINKELQYLNKEDRLLRWLLVKHR 97
+Q + + NI Q L ++ +LR+ ++ R
Sbjct: 61 TAHFIQYRVFAPSGNIYDLAQKLKYDNSILRFKFLRRR 98
>gi|146416009|ref|XP_001483974.1| hypothetical protein PGUG_03355 [Meyerozyma guilliermondii ATCC
6260]
Length = 122
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 9 LLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMT 68
+L P + ++V+ +GK + GV+ D+TS G L I K R++QG M
Sbjct: 11 ILDPQQMAKEAKKIVSTIGKLILNNRGVIRDVTSMGPRVLPKVISKDQERHFQGYHFLMG 70
Query: 69 MMSTPNINKE-LQYLNKEDRLLRWLLVKH 96
+ ++ +E L+ L ++ R+LR +++H
Sbjct: 71 FDVSSSVQQELLRTLRRDPRVLRANIIRH 99
>gi|406886854|gb|EKD33796.1| hypothetical protein ACD_75C02590G0006 [uncultured bacterium]
Length = 142
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + +++P+ E + ++ + + G + ++ +G +L Y IKK +Y
Sbjct: 1 MRRYETIFIIRPNAGDEEINRIIENTRQIILDEKGTIIELNKWGMKKLAYSIKKESLGFY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYGP 120
T + I ++ + +D +L+++ +K NG+E A + A+ KK P
Sbjct: 61 VFCDFAGTPAAVAEIERKFRI---DDLVLKYMTIKTADSINGEEIAQA-VAAAEQKKTVP 116
Query: 121 SAIYDFEGIEEEDNDEEEYDSE 142
+ + +G + +D+ E E + E
Sbjct: 117 ADDQETDGADVDDSVEIETEDE 138
>gi|312112740|ref|YP_003991056.1| 30S ribosomal protein S6 [Geobacillus sp. Y4.1MC1]
gi|336237206|ref|YP_004589822.1| 30S ribosomal protein S6 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423721700|ref|ZP_17695882.1| 30S ribosomal protein S6 [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217841|gb|ADP76445.1| ribosomal protein S6 [Geobacillus sp. Y4.1MC1]
gi|335364061|gb|AEH49741.1| 30S ribosomal protein S6 [Geobacillus thermoglucosidasius
C56-YS93]
gi|383365503|gb|EID42799.1| 30S ribosomal protein S6 [Geobacillus thermoglucosidans
TNO-09.020]
Length = 95
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +++P++ E+ LV R + +T++T +G +L Y IKK Y
Sbjct: 1 MRKYEIMYIIRPNLDDEARQALVDRFNNILKENGAEITNVTDWGKRRLAYEIKK----YR 56
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
G M + ++S P +E L + D ++R ++V+
Sbjct: 57 DGYYMIINVVSEPKAVQEFDRLARISDDIIRHIVVR 92
>gi|300722447|ref|YP_003711735.1| LexA-regulated (SOS) repair enzyme [Xenorhabdus nematophila ATCC
19061]
gi|297628952|emb|CBJ89537.1| LexA-regulated (SOS) repair enzyme [Xenorhabdus nematophila ATCC
19061]
Length = 711
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 17 ESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY-----------QGQLM 65
E L +L+ R HV + L + SF +Q G+ + DG + QG+L+
Sbjct: 443 EQLTQLLWRNIPHVVVTSATLRSLNSFSRIQELTGLNENDGDRFVTLSSPFEHVRQGRLI 502
Query: 66 QMTMMSTPNINKELQYLNKEDRLLRWLLV--KHRGM 99
M P I E+Q+L + R R ++ KHRGM
Sbjct: 503 IPQMTQEPTIQNEMQHLEEMARYFRSQVIAGKHRGM 538
>gi|344231576|gb|EGV63458.1| ribosomal protein S6 [Candida tenuis ATCC 10573]
Length = 113
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 20 MELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNINKE- 78
M++ + VGK + GV+ DITS G L I K R+++G M + + +E
Sbjct: 22 MKIASTVGKLILNNRGVIRDITSMGPKFLPKIISKNQERHFEGYHFLMGFDVSSTVQQEL 81
Query: 79 LQYLNKEDRLLRWLLVK---HRGMKNG 102
L+ L K+ R+LR ++K HR + G
Sbjct: 82 LRTLRKDPRVLRASIIKRNTHRNLNPG 108
>gi|226495447|ref|NP_001144532.1| uncharacterized protein LOC100277528 [Zea mays]
gi|195643524|gb|ACG41230.1| hypothetical protein [Zea mays]
Length = 118
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 67 MTMMSTPNINKELQYLNKEDRLLR--WLLVKHRGMKNGKE 104
MTMM P++ +E LNKEDRLLR WL+VKHR G E
Sbjct: 1 MTMMVPPSLPRE-HSLNKEDRLLRFCWLVVKHRDAVYGLE 39
>gi|190347047|gb|EDK39257.2| hypothetical protein PGUG_03355 [Meyerozyma guilliermondii ATCC
6260]
Length = 122
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 ELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNINKE-L 79
++V+ +GK + GV+ D+TS G L I K R++QG M + ++ +E L
Sbjct: 23 KIVSTIGKLILNNRGVIRDVTSMGPRVLPKVISKDQERHFQGYHFLMGFDVSSSVQQELL 82
Query: 80 QYLNKEDRLLRWLLVKH 96
+ L ++ R+LR +++H
Sbjct: 83 RTLRRDPRVLRANIIRH 99
>gi|170098324|ref|XP_001880381.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644819|gb|EDR09068.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 123
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLY + + K + + + ELV + H+ GV+ I S+GT L +K+
Sbjct: 1 MPLYQMLCITKHYPEYKHIRELVRQSAMHIMAVGGVVRSIDSWGTRTLPQRMKRQGPYVS 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKED-RLLRWLLVK 95
G + ++P K L + + D R+LRW ++K
Sbjct: 61 VGDYWTLHFDTSPATLKTLNGIMRRDPRVLRWTVLK 96
>gi|125588601|gb|EAZ29265.1| hypothetical protein OsJ_13329 [Oryza sativa Japonica Group]
Length = 215
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR----- 58
Y+ M++L+P + +E + L+ R + + + ++ + G + L Y I+K + R
Sbjct: 110 YETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGLPS 169
Query: 59 -YYQGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHRGMK 100
YY G + +T + P LQ LN +D ++R K R K
Sbjct: 170 TYYDGIYLLVTYFTKPESLDALQMRLNADDDVIRSTSFKVRKRK 213
>gi|125546402|gb|EAY92541.1| hypothetical protein OsI_14280 [Oryza sativa Indica Group]
Length = 215
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR----- 58
Y+ M++L+P + +E + L+ R + + + ++ + G + L Y I+K + R
Sbjct: 110 YETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGLPS 169
Query: 59 -YYQGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHRGMK 100
YY G + +T + P LQ LN +D ++R K R K
Sbjct: 170 TYYDGIYLLVTYFTKPESLDALQMRLNADDDVIRSTSFKVRKRK 213
>gi|169832353|ref|YP_001718335.1| 30S ribosomal protein S6 [Candidatus Desulforudis audaxviator
MP104C]
gi|226703452|sp|B1I6T1.1|RS6_DESAP RecName: Full=30S ribosomal protein S6
gi|169639197|gb|ACA60703.1| ribosomal protein S6 [Candidatus Desulforudis audaxviator MP104C]
Length = 94
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +LKP + E +L+ + K + R+G +T++ +G +L Y IK Y
Sbjct: 1 MRQYEVMYILKPDLEDEESTQLIEKFSKIITDRDGEITELNRWGKRRLAYEIKD----YR 56
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+G + M + +EL + + D LLR ++++
Sbjct: 57 EGHYVVMKCRAEHAAAQELDRVFRITDGLLRHMIIR 92
>gi|115456525|ref|NP_001051863.1| Os03g0843400 [Oryza sativa Japonica Group]
gi|41469637|gb|AAS07360.1| putative plastid ribosomal protein S6 precursor [Oryza sativa
Japonica Group]
gi|108712038|gb|ABF99833.1| ribosomal protein S6 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550334|dbj|BAF13777.1| Os03g0843400 [Oryza sativa Japonica Group]
gi|215692368|dbj|BAG87788.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704476|dbj|BAG93910.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR----- 58
Y+ M++L+P + +E + L+ R + + + ++ + G + L Y I+K + R
Sbjct: 114 YETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGLPS 173
Query: 59 -YYQGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHRGMK 100
YY G + +T + P LQ LN +D ++R K R K
Sbjct: 174 TYYDGIYLLVTYFTKPESLDALQMRLNADDDVIRSTSFKVRKRK 217
>gi|430813428|emb|CCJ29224.1| unnamed protein product [Pneumocystis jirovecii]
Length = 100
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M LY+ + + + ++ +SL ELV G + + G++ D+ +G + L IKK +
Sbjct: 1 MVLYELLCISRADLKVKSLRELVKTSGSVIINKGGIIRDLEDWGNIVLPKKIKKHQQTHC 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKED-RLLR 90
+G M S+P E+ + K D R++R
Sbjct: 61 EGHHWTMLFDSSPQTQFEVNKILKLDPRIIR 91
>gi|260662544|ref|ZP_05863439.1| 30S ribosomal protein S6 [Lactobacillus fermentum 28-3-CHN]
gi|260553235|gb|EEX26178.1| 30S ribosomal protein S6 [Lactobacillus fermentum 28-3-CHN]
Length = 97
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQG- 62
Y+ +++P + + + ELVAR K + + D +GT + Y I G+Y +G
Sbjct: 6 YEITYIIRPDIEESAKSELVARFDKILADNGATVVDSADWGTRRFAYQI----GKYTEGT 61
Query: 63 -QLMQMTMMSTPNINKELQYLNKEDRLLRWLLVK 95
++ +T S ++N+ + D +LR ++VK
Sbjct: 62 YHIVNVTADSDASLNEFDRLAKFSDDILRHMIVK 95
>gi|50422585|ref|XP_459864.1| mitochondrial 37S ribosomal protein YmS16 [Debaryomyces hansenii
CBS767]
gi|49655532|emb|CAG88105.1| DEHA2E12826p [Debaryomyces hansenii CBS767]
Length = 120
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 21 ELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNINKE-L 79
++V+ +GK + G++ DITS G L + K R++QG M + N+ +E L
Sbjct: 23 KIVSTLGKLILNNRGIIRDITSLGPRTLPKIVSKDQERHFQGYHFLMGFDVSSNVQQELL 82
Query: 80 QYLNKEDRLLRWLLVKH 96
+ L ++ R+LR ++K
Sbjct: 83 RTLRRDPRVLRANIIKQ 99
>gi|326531910|dbj|BAK01331.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR----- 58
Y+ M++L+P + +E + L+ R + + + ++ + G + L Y I+K + R
Sbjct: 100 YETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGLPF 159
Query: 59 -YYQGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHR 97
YY G + T + P LQ LN +D ++R K R
Sbjct: 160 TYYDGIYLLWTYFTKPESVDALQMKLNADDDVIRSTSFKVR 200
>gi|326524554|dbj|BAK00660.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR----- 58
Y+ M++L+P + +E + L+ R + + + ++ + G + L Y I+K + R
Sbjct: 100 YETMVVLRPDMSEEERLALIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGLPF 159
Query: 59 -YYQGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHR 97
YY G + T + P LQ LN +D ++R K R
Sbjct: 160 TYYDGIYLLWTYFTKPESVDALQMKLNADDDVIRSTSFKVR 200
>gi|395332705|gb|EJF65083.1| hypothetical protein DICSQDRAFT_51095 [Dichomitus squalens
LYAD-421 SS1]
Length = 115
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP Y + + + + + +LV RV HV GV+ + S+GT L +++ +
Sbjct: 1 MPFYQLVCIAAHYPEYKHIKDLVTRVASHVLKEGGVVRKLDSWGTCTLPQRMRRNKQYHT 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKED-RLLRWLLVK 95
G M ++P + L + + D R++RW +K
Sbjct: 61 IGDYWTMQFDASPTTLRGLNTIMRHDPRVIRWTNLK 96
>gi|365843154|ref|ZP_09384107.1| ribosomal protein S6 [Flavonifractor plautii ATCC 29863]
gi|373118233|ref|ZP_09532366.1| ribosomal protein S6 [Lachnospiraceae bacterium 7_1_58FAA]
gi|364573162|gb|EHM50672.1| ribosomal protein S6 [Flavonifractor plautii ATCC 29863]
gi|371667543|gb|EHO32667.1| ribosomal protein S6 [Lachnospiraceae bacterium 7_1_58FAA]
Length = 99
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ + +L P++ +E+ +VA+ K + +NG L ++ +G L Y I L YY
Sbjct: 8 YEVVFILNPNLDEEATAAMVAKF-KTLVEQNGTLAEVEEWGKRHLAYPINDLTEGYY--- 63
Query: 64 LMQMTMMSTPNINKEL-QYLNKEDRLLRWLLV 94
+ MT + P +EL + L D ++R L+V
Sbjct: 64 -VLMTFNAKPEFPRELDRILRITDGVMRSLIV 94
>gi|301062690|ref|ZP_07203308.1| ribosomal protein S6 [delta proteobacterium NaphS2]
gi|300443213|gb|EFK07360.1| ribosomal protein S6 [delta proteobacterium NaphS2]
Length = 137
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + ++ P++ E +VA+ V GV+T + +G L Y IKK D +Y
Sbjct: 1 MRYYETLYIINPNLADEDYRAVVAKFTDVVEKNGGVVTKVDEWGKKTLAYDIKKFDKGFY 60
Query: 61 QGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYG 119
+ + + EL+ L +DR+L++ +K + ADL+K
Sbjct: 61 ----VLLQFCGEAGLTAELKRELGLDDRVLKYQTIKL-------------SDNADLEKLK 103
Query: 120 PSAIYD 125
P + D
Sbjct: 104 PEPVPD 109
>gi|156100043|ref|XP_001615749.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804623|gb|EDL46022.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 114
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRY 59
M LY+ + L H++K+ + L+ V NG + I G + + IKK G +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 YQGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHRGMKNGKEARYAETSE 112
+ G+ +T S K+L ++ + +LR+L VK + N A ++ +E
Sbjct: 61 HFGRFYCITFYSNSKSIKDLNEFFHSNTFILRFLNVKMKYRSNFLVAPFSHINE 114
>gi|113671790|ref|NP_001038921.1| 28S ribosomal protein S6, mitochondrial [Danio rerio]
gi|112418940|gb|AAI22264.1| Zgc:153390 [Danio rerio]
Length = 118
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP Y+ ++LK R E+ ++ R + ++ R V+ + + G +L Y I K D R
Sbjct: 1 MPRYELYMVLKAMQRPET-AAVLRRTVETLFERGAVVRSLENLGERKLPYKISKHDSRQS 59
Query: 61 QGQLMQMTMMSTPNI-NKELQYLNKEDRLLRWLLVK 95
G + ++PNI + L +L ++ +LR +VK
Sbjct: 60 HGGYFSIDFHASPNIVSGLLNHLERDVDVLRPTVVK 95
>gi|302680691|ref|XP_003030027.1| hypothetical protein SCHCODRAFT_57217 [Schizophyllum commune
H4-8]
gi|300103718|gb|EFI95124.1| hypothetical protein SCHCODRAFT_57217 [Schizophyllum commune
H4-8]
Length = 125
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLY + + + + ELV + +HV GV+ I S+GT L +++ Y
Sbjct: 1 MPLYQLLCITVHSPEYKHIKELVRQSAQHVMHAGGVVRSIDSWGTRMLPQRMRRHRQAYN 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKED-RLLRWLLVK 95
G + + P + L + ++D R++RW ++K
Sbjct: 61 YGDYWTLHFDTAPRTLRSLNGIMRQDPRVIRWSVLK 96
>gi|332654783|ref|ZP_08420525.1| ribosomal protein S6 [Ruminococcaceae bacterium D16]
gi|332516126|gb|EGJ45734.1| ribosomal protein S6 [Ruminococcaceae bacterium D16]
Length = 98
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ M +L P + +E++ LVA+ K V NG +++I +G +L Y I L YY
Sbjct: 8 YEAMYILDPALSEEAIAALVAKF-KAVVEANGTVSEIDEWGKRRLAYPINDLMEGYY--- 63
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLV 94
+ MT + I EL + + D ++R L+V
Sbjct: 64 -VLMTFNAAAAIPAELDRIFRITDGVMRSLIV 94
>gi|196249875|ref|ZP_03148571.1| ribosomal protein S6 [Geobacillus sp. G11MC16]
gi|196210751|gb|EDY05514.1| ribosomal protein S6 [Geobacillus sp. G11MC16]
Length = 95
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +++P++ E+ +V R + + +T++T +G +L Y I+K Y
Sbjct: 1 MRKYEIMYIIRPNMDDEARQAVVERFNNVLKEKGAEITNVTDWGKRRLAYEIEK----YR 56
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
G M + +M+ P +E L + + ++R ++VK
Sbjct: 57 DGYYMILNVMAEPQAVQEFDRLARISEDIIRHIVVK 92
>gi|289547947|ref|YP_003472935.1| 30S ribosomal protein S6 [Thermocrinis albus DSM 14484]
gi|289181564|gb|ADC88808.1| ribosomal protein S6 [Thermocrinis albus DSM 14484]
Length = 112
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRYYQG 62
Y+ +++ KP + +E + + V + + + G + + +G QL Y I + GRYY
Sbjct: 12 YESVVVFKPTLSEEEVQRRLQEVREFITKKGGQILEEQDWGLKQLAYPINRFQHGRYY-- 69
Query: 63 QLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ + P + EL + K D ++RWL +K
Sbjct: 70 --LFLIRSENPELPNELDFFYKINDDVIRWLNIK 101
>gi|293331817|ref|NP_001168663.1| uncharacterized protein LOC100382451 [Zea mays]
gi|223950019|gb|ACN29093.1| unknown [Zea mays]
gi|414873867|tpg|DAA52424.1| TPA: hypothetical protein ZEAMMB73_242752 [Zea mays]
Length = 222
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR----- 58
Y+ M++L+P + +E + + R + + + ++ + G + L Y I+K + R
Sbjct: 117 YETMVVLRPDMSEEERLAFIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGLPS 176
Query: 59 -YYQGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHRGMK 100
YY G + +T + P LQ LN +D ++R K R K
Sbjct: 177 TYYDGIYLLITYFTKPESMDALQLKLNADDDVIRSTSFKVRQRK 220
>gi|56422017|ref|YP_149335.1| 30S ribosomal protein S6 [Geobacillus kaustophilus HTA426]
gi|261420891|ref|YP_003254573.1| 30S ribosomal protein S6 [Geobacillus sp. Y412MC61]
gi|297531676|ref|YP_003672951.1| ribosomal protein S6 [Geobacillus sp. C56-T3]
gi|319768562|ref|YP_004134063.1| 30S ribosomal protein S6 [Geobacillus sp. Y412MC52]
gi|375010664|ref|YP_004984297.1| 30S ribosomal protein S6 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448239754|ref|YP_007403812.1| 30S ribosomal protein S6 [Geobacillus sp. GHH01]
gi|61215358|sp|Q5KU69.1|RS6_GEOKA RecName: Full=30S ribosomal protein S6
gi|56381859|dbj|BAD77767.1| 30S ribosomal protein S6 (BS9) [Geobacillus kaustophilus HTA426]
gi|261377348|gb|ACX80091.1| ribosomal protein S6 [Geobacillus sp. Y412MC61]
gi|297254928|gb|ADI28374.1| ribosomal protein S6 [Geobacillus sp. C56-T3]
gi|317113428|gb|ADU95920.1| ribosomal protein S6 [Geobacillus sp. Y412MC52]
gi|359289513|gb|AEV21197.1| 30S ribosomal protein S6 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445208596|gb|AGE24061.1| 30S ribosomal protein S6 [Geobacillus sp. GHH01]
Length = 95
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
M Y+ M +++P++ E+ LV R +V NG +T++T +G +L Y I+K Y
Sbjct: 1 MRKYEIMYIIRPNMDDEARQALVERFN-NVLKENGAEITNVTDWGKRRLAYEIQK----Y 55
Query: 60 YQGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
G M + ++S P +E L + + ++R ++VK
Sbjct: 56 RDGYYMIVNVVSEPKAVQEFDRLARISEDIIRHIVVK 92
>gi|384491323|gb|EIE82519.1| 30S ribosomal protein S6 [Rhizopus delemar RA 99-880]
Length = 111
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP Y+ + + + ++ + +L +L+ K V R GV+ ++G +++ + IK+ +
Sbjct: 1 MPFYELVCIARHNIVESNLKDLLKTSAKQVLNRGGVVRGFDNWGDMKIPHRIKRHQEYFT 60
Query: 61 QGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVK 95
G+ M + P I +EL + L + R+LR +K
Sbjct: 61 DGRYWTMHFDANPLIVQELGKKLAVDTRVLRHTFIK 96
>gi|260945913|ref|XP_002617254.1| hypothetical protein CLUG_02698 [Clavispora lusitaniae ATCC
42720]
gi|238849108|gb|EEQ38572.1| hypothetical protein CLUG_02698 [Clavispora lusitaniae ATCC
42720]
Length = 120
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 3 LYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQG 62
L+ + P + + ++ + VGK + GV+ +ITS G L + K R++QG
Sbjct: 5 LFAIARISDPVLASKEASKIASTVGKLILNNRGVIREITSLGPKPLPKIMSKEQERHFQG 64
Query: 63 QLMQMTMMSTPNINKE-LQYLNKEDRLLRWLLVKH 96
M S+ + +E L+ L ++ R+LR ++K+
Sbjct: 65 YHFMMGFDSSSAVQQELLRTLRRDPRILRSSIIKN 99
>gi|344301634|gb|EGW31939.1| mitochondrial ribosomal protein [Spathaspora passalidarum NRRL
Y-27907]
Length = 121
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 3 LYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQG 62
L+ + P + + VG+ + GV+ DI S G L I K R++QG
Sbjct: 5 LFAIARITDPINKSRDAKRIATTVGRLILANRGVVRDIISIGDRPLPKIISKDHERHFQG 64
Query: 63 QLMQMTMMSTPNINKE-LQYLNKEDRLLRWLLVKH 96
M + N+ ++ L+ L ++ R+LR ++KH
Sbjct: 65 YQFTMGFDCSSNVQEQLLRTLRQDPRILRANIMKH 99
>gi|138897056|ref|YP_001127509.1| 30S ribosomal protein S6 [Geobacillus thermodenitrificans NG80-2]
gi|134268569|gb|ABO68764.1| Ribosomal protein S6 (BS9) [Geobacillus thermodenitrificans
NG80-2]
Length = 98
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ M +++P++ E+ +V R + + +T++T +G +L Y I+K Y G
Sbjct: 7 YEIMYIIRPNMDDEARQAVVERFNNVLKEKGAEITNVTDWGKRRLAYEIEK----YRDGY 62
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
M + +M+ P +E L + + ++R ++VK
Sbjct: 63 YMILNVMAEPQAVQEFDRLARISEDIIRHIVVK 95
>gi|242037445|ref|XP_002466117.1| hypothetical protein SORBIDRAFT_01g001650 [Sorghum bicolor]
gi|241919971|gb|EER93115.1| hypothetical protein SORBIDRAFT_01g001650 [Sorghum bicolor]
Length = 215
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR----- 58
Y+ M++L+P + +E + + R + + + ++ + G + L Y I+K + R
Sbjct: 110 YETMVVLRPDMSEEERLAFIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGLPS 169
Query: 59 -YYQGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHRGMK 100
YY G + +T + P LQ LN +D ++R K R K
Sbjct: 170 TYYDGIYLLITYFTKPESMDALQLRLNADDDVIRSTSFKVRQRK 213
>gi|448081993|ref|XP_004195024.1| Piso0_005562 [Millerozyma farinosa CBS 7064]
gi|359376446|emb|CCE87028.1| Piso0_005562 [Millerozyma farinosa CBS 7064]
Length = 122
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 13 HVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMST 72
+V KE+ M++ + +GK + GV+ DITS G L + K R++QG M +
Sbjct: 16 NVSKEA-MKITSTIGKLILNNRGVIRDITSMGPRHLPKIMVKDQERHFQGYHFLMGFDVS 74
Query: 73 PNINKE-LQYLNKEDRLLRWLLVKH 96
+ +E L+ L K+ R+LR + K
Sbjct: 75 SKVQEELLRTLKKDPRILRANITKQ 99
>gi|150866538|ref|XP_001386177.2| mitochondrial 37S ribosomal protein YmS16 [Scheffersomyces
stipitis CBS 6054]
gi|149387794|gb|ABN68148.2| mitochondrial ribosomal protein [Scheffersomyces stipitis CBS
6054]
Length = 121
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 21 ELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNINKE-L 79
++V+ +GK + G++ DITS G L + K R++QG M + + + L
Sbjct: 23 KIVSTIGKLILNNRGIIRDITSMGARPLPKIMSKEQERHFQGYHFLMGFDVSATVQSQLL 82
Query: 80 QYLNKEDRLLRWLLVKH 96
+ L + R+LR +VKH
Sbjct: 83 RTLRSDPRILRANVVKH 99
>gi|448086506|ref|XP_004196117.1| Piso0_005562 [Millerozyma farinosa CBS 7064]
gi|359377539|emb|CCE85922.1| Piso0_005562 [Millerozyma farinosa CBS 7064]
Length = 122
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 13 HVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMST 72
+V KE+ M++ + +GK + GV+ DITS G L + K R++QG M +
Sbjct: 16 NVSKEA-MKITSTIGKLILNNRGVIRDITSMGPRNLPKIMVKDQERHFQGYHFLMGFDVS 74
Query: 73 PNINKE-LQYLNKEDRLLRWLLVKH 96
+ +E L+ L K+ R+LR + K
Sbjct: 75 SKVQEELLRTLKKDPRILRANITKQ 99
>gi|260893968|ref|YP_003240065.1| 30S ribosomal protein S6 [Ammonifex degensii KC4]
gi|260866109|gb|ACX53215.1| ribosomal protein S6 [Ammonifex degensii KC4]
Length = 95
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +++P V E+L +V + K V G + I +G +L Y I+K
Sbjct: 1 MRAYETMYIVRPQVEGEALEAVVEKFKKIVEDGGGTVVSIDRWGKRRLAYPIEK----ER 56
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+GQ + M + P + +EL + K +LR ++V+
Sbjct: 57 EGQYIVMRFQAEPPVVQELDRVFKITGDVLRHIIVR 92
>gi|156848987|ref|XP_001647374.1| hypothetical protein Kpol_1018p47 [Vanderwaltozyma polyspora DSM
70294]
gi|156118060|gb|EDO19516.1| hypothetical protein Kpol_1018p47 [Vanderwaltozyma polyspora DSM
70294]
Length = 129
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 3 LYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQG 62
L + ++ P V + EL +GK + GV+ I+ GT L IKK + +++QG
Sbjct: 5 LIGIVRVMNPVVANKEAKELATTIGKLIINNRGVVRKISPMGTSPLPKIIKKDEEQHFQG 64
Query: 63 QLMQMTMMSTPNINKE-LQYLNKEDRLLRWLLVK 95
M ++ + E L+ L + R++R ++K
Sbjct: 65 YQFMMLFDASVGVQSEILRTLKNDPRVIRSSIIK 98
>gi|374583832|ref|ZP_09656926.1| ribosomal protein S6 [Desulfosporosinus youngiae DSM 17734]
gi|374419914|gb|EHQ92349.1| ribosomal protein S6 [Desulfosporosinus youngiae DSM 17734]
Length = 95
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + +++P + +E+ LV R+G V G + +G +L Y IK Y
Sbjct: 1 MKAYEILYIIRPDLDEEATTALVDRLGGLVAANGGANLTVEKWGKRRLAYEIKD----YR 56
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+GQ + M ++E++ + K D ++R+L V+
Sbjct: 57 EGQYILMNFEGEGRTSQEIERVMKISDDVIRFLTVR 92
>gi|260436337|ref|ZP_05790307.1| FAD/FMN-containing dehydrogenase [Synechococcus sp. WH 8109]
gi|260414211|gb|EEX07507.1| FAD/FMN-containing dehydrogenase [Synechococcus sp. WH 8109]
Length = 454
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 16/136 (11%)
Query: 10 LKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTM 69
L+P R+ L E+ A H YG NG++T ++ + + +D ++ + M
Sbjct: 190 LRPDARRHQLAEMDAEALNHAYGTNGIITALSLATAPAVNWHQVSVDCEHWDQAIELMQR 249
Query: 70 MSTPNINKELQYLNKEDRLLR---W-----------LLVKHRGMKNGKEARYAETSEADL 115
++ ++ L L ++ L R W LLV G+ + + R A+++ A+L
Sbjct: 250 IAASALDLHLASLLEQPLLSRMPGWGGPVVSVHRLLLLVAPDGLNSLQ--RMAQSAGANL 307
Query: 116 KKYGPSAIYDFEGIEE 131
+ GP + G+ E
Sbjct: 308 RDLGPEDLSGGNGLRE 323
>gi|336384469|gb|EGO25617.1| hypothetical protein SERLADRAFT_387862 [Serpula lacrymans var.
lacrymans S7.9]
Length = 133
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 1 MPLYDCMLLLKPHVRK-ESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRY 59
MP Y ML + H ++ + +LV KHV GV+ +I +GT L +++ Y
Sbjct: 1 MPFYQ-MLCITAHYKEYRHIKDLVQMSAKHVMNAGGVVRNINYWGTQTLPQRMQRHQQYY 59
Query: 60 YQGQLMQMTMMSTPNINKELQYLNKED-RLLRWLLVK 95
G M ++P + L + + D R++RW ++K
Sbjct: 60 NTGDYWTMHFDTSPRTLRTLGGIMRRDPRVIRWTMLK 96
>gi|332983148|ref|YP_004464589.1| 30S ribosomal protein S6P [Mahella australiensis 50-1 BON]
gi|332700826|gb|AEE97767.1| SSU ribosomal protein S6P [Mahella australiensis 50-1 BON]
Length = 96
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ M ++ P + E+ ++ R + + G + ++ +G +L Y IK + YY
Sbjct: 4 YETMFVINPTLDAEATQAVIERFKNLISEQGGEVRNVDEWGRRKLAYEIKDFNEGYY--- 60
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLV 94
+ M + P++ EL+ + K D ++R+L++
Sbjct: 61 -VLMEFAANPDLPAELERVYKITDDIIRYLII 91
>gi|345018950|ref|YP_004821303.1| 30S ribosomal protein S6 [Thermoanaerobacter wiegelii Rt8.B1]
gi|344034293|gb|AEM80019.1| 30S ribosomal protein S6 [Thermoanaerobacter wiegelii Rt8.B1]
Length = 95
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGI-KKLDGRY 59
M Y+ M +L P + +E L+ R + G +T+ +G +L Y I KKL+G Y
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIIENGGEITNFDEWGKRKLAYPIDKKLEGYY 60
Query: 60 YQGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M S +++EL+ + K D +LR+L+++
Sbjct: 61 -----VLMNFNSNSKVSQELERVYKITDGVLRYLIIR 92
>gi|302786646|ref|XP_002975094.1| hypothetical protein SELMODRAFT_58368 [Selaginella moellendorffii]
gi|302814601|ref|XP_002988984.1| hypothetical protein SELMODRAFT_48625 [Selaginella moellendorffii]
gi|300143321|gb|EFJ10013.1| hypothetical protein SELMODRAFT_48625 [Selaginella moellendorffii]
gi|300157253|gb|EFJ23879.1| hypothetical protein SELMODRAFT_58368 [Selaginella moellendorffii]
Length = 112
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR----- 58
Y+ M +L+P + +E + L R + + G+ +I + G + L YGI K + R
Sbjct: 13 YETMAVLRPDITEEQRLALSQRYEEMIIAGGGMDVEIFNRGIMPLAYGILKKNTRGEKNT 72
Query: 59 YYQGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVK 95
Y G T + P KELQ L +D ++R K
Sbjct: 73 YVDGIFYMFTFATKPGSVKELQRKLETDDDIIRVTTFK 110
>gi|357121647|ref|XP_003562529.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Brachypodium distachyon]
Length = 210
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR----- 58
Y+ M++L+P + +E + L+ R + + + ++ + G + L Y I+K + R
Sbjct: 105 YETMVVLRPDMSEEERLALIQRYEELLVSGGAMYVEVFNRGVIPLAYSIRKRNSRTGLPF 164
Query: 59 -YYQGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKHR 97
YY G + T + P LQ LN +D ++R K R
Sbjct: 165 TYYDGIYLLWTYFTKPESVDALQMKLNADDDVIRSTSFKVR 205
>gi|390933650|ref|YP_006391155.1| 30S ribosomal protein S6 [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569151|gb|AFK85556.1| 30S ribosomal protein S6 [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 95
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + ++ P V E+ L+ + + + G +T++ +G +L Y I K YY
Sbjct: 1 MRAYETIFVISPDVNDEARPALIEKFKNLITEKGGEITNVDEWGRRKLAYEIDKKSEGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M S ++ EL+ + K D +LR+L+VK
Sbjct: 61 ----VLMNFTSDVDVPHELERVYKITDGILRYLIVK 92
>gi|124810148|ref|XP_001348780.1| mitochondrial ribosomal protein S6-2 precursor, putative
[Plasmodium falciparum 3D7]
gi|23497680|gb|AAN37219.1| mitochondrial ribosomal protein S6-2 precursor, putative
[Plasmodium falciparum 3D7]
Length = 120
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRY 59
M LY+ + L H++K+ + L+ + NG + I G + + IKK G +
Sbjct: 1 MVLYESYISLNKHIKKDDVRNLMKNFNYIINKHNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 YQGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHRGMKNGKEARYAETSEAD 114
+ G+ +T S K+L ++ + +LR+L +K + N A ++ +E +
Sbjct: 61 HFGRFYCITFYSNSKSIKDLNEFFHSNTYVLRFLNMKMKYRSNFLVAPFSYVNEIE 116
>gi|222823952|ref|YP_002575526.1| 30S ribosomal protein S6 [Campylobacter lari RM2100]
gi|254765227|sp|B9KCI6.1|RS6_CAMLR RecName: Full=30S ribosomal protein S6
gi|222539174|gb|ACM64275.1| 30S ribosomal protein S6 [Campylobacter lari RM2100]
Length = 124
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 27/128 (21%)
Query: 4 YDCMLLLKPHVRKESL---MELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
Y+ + +LKP + +E + +E V K V +NG + + GT +L Y IKK Y
Sbjct: 4 YEVLFILKPTLTEEEVSAKLEFV----KEVLTKNGAEIESVVPMGTRKLAYKIKK----Y 55
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKH-------------RGMK-NGKE 104
+G + + N+ EL+ L + ++R+L+VK+ +G+K N KE
Sbjct: 56 ERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAWEKLSKGIKQNKKE 115
Query: 105 ARYAETSE 112
+ +E++E
Sbjct: 116 IKASESTE 123
>gi|291277459|ref|YP_003517231.1| 30S ribosomal protein S6 [Helicobacter mustelae 12198]
gi|290964653|emb|CBG40508.1| putative 30S ribosomal protein S6 [Helicobacter mustelae 12198]
Length = 139
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +LKP + +E + + + + G + G L Y IKK YY
Sbjct: 1 MRHYETMFILKPTLVEEEIASKIEFYKEAITKNGGSIQTTLDMGMRNLAYEIKKNKRGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVKHRGMKNGKEARYAETSEADLKKYG 119
+ + P++ EL+ L + + +LR++++K+ K K A +A A+ K
Sbjct: 61 ----FVIYFQANPSLVLELERLYRINEDVLRFIVIKYESKKEQK-AWHALVDRANKK--- 112
Query: 120 PSAIYDFEGIEEEDNDEEEYDSEDA 144
P A EE+ ++ E+ SE+A
Sbjct: 113 PHASTSRPKSEEKTEEQAEHKSEEA 137
>gi|336371710|gb|EGO00050.1| hypothetical protein SERLA73DRAFT_38655 [Serpula lacrymans var.
lacrymans S7.3]
Length = 112
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 1 MPLYDCMLLLKPHVRK-ESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRY 59
MP Y ML + H ++ + +LV KHV GV+ +I +GT L +++ Y
Sbjct: 1 MPFYQ-MLCITAHYKEYRHIKDLVQMSAKHVMNAGGVVRNINYWGTQTLPQRMQRHQQYY 59
Query: 60 YQGQLMQMTMMSTPNINKELQYLNKED-RLLRWLLVK 95
G M ++P + L + + D R++RW ++K
Sbjct: 60 NTGDYWTMHFDTSPRTLRTLGGIMRRDPRVIRWTMLK 96
>gi|220933168|ref|YP_002510076.1| 30S ribosomal protein S6 [Halothermothrix orenii H 168]
gi|219994478|gb|ACL71081.1| ribosomal protein S6 [Halothermothrix orenii H 168]
Length = 95
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ ++KP + +E+ ++ RV + + G + ++ +G L Y IK + YY
Sbjct: 1 MRAYETTFIIKPDLEEEARNNILDRVKEIIDTNGGKVNEVDEWGDRNLAYEIKNYNTGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKH 96
L++ I++ +Y N D +LR+L+++
Sbjct: 61 --TLIKFE-GEAETIDEMERYFNLTDSVLRYLVIRE 93
>gi|397905884|ref|ZP_10506718.1| SSU ribosomal protein S6p [Caloramator australicus RC3]
gi|397161052|emb|CCJ34053.1| SSU ribosomal protein S6p [Caloramator australicus RC3]
Length = 94
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + ++ P+V +E + + ++ + GV+ ++ +G +L Y I + YY
Sbjct: 1 MKRYETLFVIAPNVVEEEIKATIEKIKGVIENGGGVIDNVDEWGKRRLAYEINHFNEGYY 60
Query: 61 QGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVK 95
+ + ++P + KEL + L D ++R ++VK
Sbjct: 61 ----VLINFTASPELPKELDRVLRISDNVIRHIVVK 92
>gi|238020008|ref|ZP_04600434.1| hypothetical protein VEIDISOL_01884 [Veillonella dispar ATCC
17748]
gi|269797400|ref|YP_003311300.1| 30S ribosomal protein S6 [Veillonella parvula DSM 2008]
gi|282849202|ref|ZP_06258587.1| ribosomal protein S6 [Veillonella parvula ATCC 17745]
gi|294793014|ref|ZP_06758160.1| ribosomal protein S6 [Veillonella sp. 6_1_27]
gi|294794946|ref|ZP_06760081.1| ribosomal protein S6 [Veillonella sp. 3_1_44]
gi|313893842|ref|ZP_07827408.1| ribosomal protein S6 [Veillonella sp. oral taxon 158 str. F0412]
gi|416999969|ref|ZP_11940354.1| ribosomal protein S6 [Veillonella parvula ACS-068-V-Sch12]
gi|237863532|gb|EEP64822.1| hypothetical protein VEIDISOL_01884 [Veillonella dispar ATCC
17748]
gi|269094029|gb|ACZ24020.1| ribosomal protein S6 [Veillonella parvula DSM 2008]
gi|282580906|gb|EFB86304.1| ribosomal protein S6 [Veillonella parvula ATCC 17745]
gi|294454308|gb|EFG22682.1| ribosomal protein S6 [Veillonella sp. 3_1_44]
gi|294455959|gb|EFG24323.1| ribosomal protein S6 [Veillonella sp. 6_1_27]
gi|313441406|gb|EFR59832.1| ribosomal protein S6 [Veillonella sp. oral taxon 158 str. F0412]
gi|333976405|gb|EGL77273.1| ribosomal protein S6 [Veillonella parvula ACS-068-V-Sch12]
Length = 94
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 18/105 (17%)
Query: 1 MPLYDCMLLLKP------HVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKK 54
M Y+ M ++KP + E + L+ARVG G + + +G +L Y +KK
Sbjct: 1 MNKYEVMFIVKPAEEEATNAVIEKVEALIARVG-------GTVEKVDRWGKRRLAYAVKK 53
Query: 55 LDGRYYQGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHRG 98
+Y + + + P KE+ + L D +LR L+VKH
Sbjct: 54 FTDGFY----VLINFEAAPAEIKEIDRVLKINDEVLRHLIVKHEA 94
>gi|339006740|ref|ZP_08639315.1| 30S ribosomal protein S6 [Brevibacillus laterosporus LMG 15441]
gi|421874902|ref|ZP_16306501.1| ribosomal protein S6 [Brevibacillus laterosporus GI-9]
gi|338775949|gb|EGP35477.1| 30S ribosomal protein S6 [Brevibacillus laterosporus LMG 15441]
gi|372456099|emb|CCF16050.1| ribosomal protein S6 [Brevibacillus laterosporus GI-9]
Length = 95
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +L+P + +E + VAR + V G +T + G +L Y I+K +Y
Sbjct: 1 MRQYEVMYVLRPDLEEEKVKANVARYSEIVTNNGGEITKLQEMGKRRLAYEIQKFKDGFY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVKH 96
+ M + + E + L K D ++R+L V+
Sbjct: 61 ----VLMNFKANAEVVSETERLMKINDDVIRFLFVRE 93
>gi|222530065|ref|YP_002573947.1| 30S ribosomal protein S6 [Caldicellulosiruptor bescii DSM 6725]
gi|222456912|gb|ACM61174.1| ribosomal protein S6 [Caldicellulosiruptor bescii DSM 6725]
Length = 96
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ + ++ P + E+ L+ + K++ NG L ++ +G +L Y I K YY
Sbjct: 6 YETVFIISPTLDDEARANLIEKF-KNLISSNGQLLNVEEWGKRRLAYKIDKHAEGYY--V 62
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
LMQ T S P +EL+ + + D ++R+L+VK
Sbjct: 63 LMQFT--SKPEFPRELERVYRITDGVIRFLIVK 93
>gi|385800970|ref|YP_005837374.1| 30S ribosomal protein S6 [Halanaerobium praevalens DSM 2228]
gi|309390334|gb|ADO78214.1| ribosomal protein S6 [Halanaerobium praevalens DSM 2228]
Length = 99
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ +LKP + E ++ RV + G +T++ ++G QL Y IK Y G
Sbjct: 8 YETTFVLKPDLEDEEKQTILKRVKSAISEHEGEVTEVDAWGKKQLAYEIKD----YRSGD 63
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLVKH 96
+ + + EL+ + K D +LR+L+V++
Sbjct: 64 YTILEFNAQTTVVNELERIFKIMDGVLRYLVVRN 97
>gi|242006510|ref|XP_002424093.1| mitochondrial 28S ribosomal protein S6, putative [Pediculus
humanus corporis]
gi|212507399|gb|EEB11355.1| mitochondrial 28S ribosomal protein S6, putative [Pediculus
humanus corporis]
Length = 175
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGR 58
MPLYD ++ +K H+ ++ L ++ R K+V G+L I + G +L GIK + R
Sbjct: 19 MPLYDLIVFVK-HLNRDFLKTVLTRNAKYVIESGGLLRSIENLGLNELHRGIKPKNSR 75
>gi|184154483|ref|YP_001842823.1| 30S ribosomal protein S6 [Lactobacillus fermentum IFO 3956]
gi|227514125|ref|ZP_03944174.1| ribosomal protein S6 [Lactobacillus fermentum ATCC 14931]
gi|226703480|sp|B2GEV4.1|RS6_LACF3 RecName: Full=30S ribosomal protein S6
gi|183225827|dbj|BAG26343.1| 30S ribosomal protein S6 [Lactobacillus fermentum IFO 3956]
gi|227087496|gb|EEI22808.1| ribosomal protein S6 [Lactobacillus fermentum ATCC 14931]
Length = 97
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQG- 62
Y+ +++P + + + ELVAR K + + D + T + Y I G+Y +G
Sbjct: 6 YEITYIIRPDIEESAKSELVARFDKILADNGATVVDSADWDTRRFAYQI----GKYTEGT 61
Query: 63 -QLMQMTMMSTPNINKELQYLNKEDRLLRWLLVK 95
++ +T S ++N+ + D +LR ++VK
Sbjct: 62 YHIVNVTADSDASLNEFDRLAKFSDDILRHMIVK 95
>gi|333898185|ref|YP_004472059.1| 30S ribosomal protein S6 [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333113450|gb|AEF18387.1| 30S ribosomal protein S6 [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 95
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + ++ P V E+ L+ + + + G +T + +G +L Y I K YY
Sbjct: 1 MRAYETIFIISPDVNDEARPALIEKFKNLITEKGGEITKVDEWGRKKLAYEIDKKTEGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M S ++ EL+ + K D +LR+L+VK
Sbjct: 61 ----VLMNFTSNVDVPHELERVYKITDGILRYLIVK 92
>gi|410479141|ref|YP_006766778.1| 30S ribosomal protein S6 [Leptospirillum ferriphilum ML-04]
gi|424867700|ref|ZP_18291480.1| Ribosomal protein S6 [Leptospirillum sp. Group II 'C75']
gi|124514470|gb|EAY55983.1| ribosomal protein S6 [Leptospirillum rubarum]
gi|387221754|gb|EIJ76267.1| Ribosomal protein S6 [Leptospirillum sp. Group II 'C75']
gi|406774393|gb|AFS53818.1| ribosomal protein S6 [Leptospirillum ferriphilum ML-04]
Length = 122
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKK 54
M Y+C+LL+K ++ E + ++A+ V R G + + G +L Y +KK
Sbjct: 1 MAFYECVLLIKSNLSDEEIASVLAKFQNLVVSREGTVHHVQKMGKRRLSYELKK 54
>gi|225181167|ref|ZP_03734613.1| ribosomal protein S6 [Dethiobacter alkaliphilus AHT 1]
gi|225168136|gb|EEG76941.1| ribosomal protein S6 [Dethiobacter alkaliphilus AHT 1]
Length = 96
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +LKP + +E+ LV R + G +T++ G +L Y +KK ++
Sbjct: 1 MNKYETMFILKPELEEEAYDTLVERFKGILEGEGAEVTNVNRMGRRKLAYEVKK---KFN 57
Query: 61 QGQLMQMTMMSTPNINKELQY-LNKEDRLLRWLLVKH 96
+G + EL+ D ++R+L VK
Sbjct: 58 EGYYVLFNYTGESRATDELERNFRISDDVIRYLFVKE 94
>gi|366987471|ref|XP_003673502.1| hypothetical protein NCAS_0A05610 [Naumovozyma castellii CBS 4309]
gi|342299365|emb|CCC67119.1| hypothetical protein NCAS_0A05610 [Naumovozyma castellii CBS 4309]
Length = 173
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 9 LLKPHVRKESLMELVARVGKHVYGRNGVLTDITSF-GTVQLGYGIKKLDGRYYQGQLMQM 67
+L P V+ + EL+ +GK V GV+ +I +++L + K +++QG M
Sbjct: 52 ILDPVVKHKEAKELITTIGKLVINNRGVIRNIIPMKDSLKLPKIMTKDQEQHFQGYHFMM 111
Query: 68 TMMSTPNINKE-LQYLNKEDRLLRWLLVK 95
S+P + E L+ L K+ R++R ++K
Sbjct: 112 LFDSSPAVQSEILRTLKKDPRVIRSSIIK 140
>gi|452995475|emb|CCQ92844.1| 30S ribosomal protein S6 [Clostridium ultunense Esp]
Length = 94
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + + P + E+ +L R+ K + NG ++++ +G +L Y I + YY
Sbjct: 1 MRKYEAVFIFVPTLEDETRNQLFDRL-KGIIESNGTISNVDEWGVRKLAYEINDISEGYY 59
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ + STP I +EL + K D ++R ++++
Sbjct: 60 ----IVVNFESTPEIVEELDRVCKISDSIMRHMIIR 91
>gi|304318116|ref|YP_003853261.1| 30S ribosomal protein S6 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433656299|ref|YP_007300007.1| ribosomal protein S6 [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|302779618|gb|ADL70177.1| ribosomal protein S6 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|433294488|gb|AGB20310.1| ribosomal protein S6 [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 95
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + ++ P V E+ L+ + + + G +T++ +G +L Y I K YY
Sbjct: 1 MRSYETIFIISPDVNDEARPALIEKFKNLITEKGGEITNVDEWGRRKLAYEIDKKSEGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M S ++ EL+ + K D +LR+L+VK
Sbjct: 61 ----VLMNFNSDVDVPHELERVYKITDGILRYLIVK 92
>gi|383785929|ref|YP_005470498.1| 30S ribosomal protein S6 [Fervidobacterium pennivorans DSM 9078]
gi|383108776|gb|AFG34379.1| SSU ribosomal protein S6P [Fervidobacterium pennivorans DSM 9078]
Length = 129
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
M +Y+ M ++KP V +E LV V K + R G + ++ +G +L Y I G+Y
Sbjct: 1 MRIYETMFIIKPDVPEEERNNLVEGVKKFLEERLGAQVENVDRWGIRKLAYKI----GKY 56
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGM-----KNGKEARYAETSEA 113
++G + S +L+ Y +RW + + K + + AE+S
Sbjct: 57 FEGDYTVIYFRSNGQGLDQLENYFKVHPDFMRWQTFRREDLEKKERKAARAKKEAESSSQ 116
Query: 114 DLKKYGPS 121
+ ++ G S
Sbjct: 117 EGQQEGAS 124
>gi|222054668|ref|YP_002537030.1| 30S ribosomal protein S6 [Geobacter daltonii FRC-32]
gi|254765439|sp|B9M5U8.1|RS6_GEOSF RecName: Full=30S ribosomal protein S6
gi|221563957|gb|ACM19929.1| ribosomal protein S6 [Geobacter daltonii FRC-32]
Length = 128
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRY 59
M +Y+ + +++P + +E L + ARV + + G L + +G +L Y I+K + GRY
Sbjct: 1 MRMYETIFIVQPDLGEEELKGISARVQEVIVSMKGELKRLEDWGARKLAYPIEKFNRGRY 60
Query: 60 Y 60
Y
Sbjct: 61 Y 61
>gi|68070171|ref|XP_676997.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496937|emb|CAH99130.1| conserved hypothetical protein [Plasmodium berghei]
Length = 114
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRY 59
M LY+ + L H++K+ + L+ NG + I G + + IKK G +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIANKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 YQGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHRGMKNGKEARYAETSE 112
Y G+ +T S K+L + + +LR+L VK + N A ++ E
Sbjct: 61 YFGRFYCITFYSNSKSIKDLNELFHSNTYILRFLNVKMKYRSNFLVAPFSHVIE 114
>gi|221059165|ref|XP_002260228.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810301|emb|CAQ41495.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 114
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRY 59
M LY+ + L H++K+ + L+ V NG + I G + + IKK G +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIISINDLGWRKFAFCIKKPKVGTF 60
Query: 60 YQGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHRGMKNGKEARYA 108
+ G+ +T S K+L ++ + +LR+L VK + N A ++
Sbjct: 61 HFGRFYCITFYSNSKSIKDLNEFFHSNTFILRFLNVKMKYRSNFLVAPFS 110
>gi|163783214|ref|ZP_02178208.1| ribosomal protein S06 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881548|gb|EDP75058.1| ribosomal protein S06 [Hydrogenivirga sp. 128-5-R1-1]
Length = 113
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 3 LYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRYYQ 61
Y+ + +LKP +E + + + K + + G + +GT L Y I+ + GRY+
Sbjct: 12 FYETVFVLKPTFTEEEVKQKAEEIKKFIESKGGEILHFQDWGTKTLAYRIENFNHGRYF- 70
Query: 62 GQLMQMTMMSTPNINKELQYLNK-EDRLLRWL 92
L+Q P + EL + K + ++RWL
Sbjct: 71 --LVQYK-TENPELPNELDFQFKINEDIIRWL 99
>gi|374852883|dbj|BAL55806.1| 30S ribosomal protein S6 [uncultured candidate division OP1
bacterium]
gi|374852938|dbj|BAL55859.1| 30S ribosomal protein S6 [uncultured candidate division OP1
bacterium]
gi|374854231|dbj|BAL57119.1| 30S ribosomal protein S6 [uncultured candidate division OP1
bacterium]
gi|374855974|dbj|BAL58829.1| 30S ribosomal protein S6 [uncultured candidate division OP1
bacterium]
Length = 97
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ + +++P + K++L E + + + V G + + +G L Y IK LD YY
Sbjct: 7 YELLYIVRPDLPKDALEEAITKFQREVNEGGGQVLKLDEWGLRTLAYEIKHLDKGYY--- 63
Query: 64 LMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHR 97
+ M TP+ ++L + L ++ +LR+ +V+ +
Sbjct: 64 -VLMEFQGTPDQVRKLEERLKLDENILRYQIVRQQ 97
>gi|379013352|ref|YP_005271164.1| 30S ribosomal protein S6 [Acetobacterium woodii DSM 1030]
gi|375304141|gb|AFA50275.1| 30S ribosomal protein S6 [Acetobacterium woodii DSM 1030]
Length = 95
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + +LKP + KE++ ELV +V K V G + + +G +L Y I D +Y
Sbjct: 1 MRKYETLFVLKPDLEKEAIEELVGKV-KAVIEAAGEIEKVDEWGKRKLAYEI---DKKYQ 56
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+G + + + ++ L +L K ++ +R +++K
Sbjct: 57 EGFYVLVDFKAENSVLDALDHLYKINEQFIRSIVIK 92
>gi|302872493|ref|YP_003841129.1| 30S ribosomal protein S6 [Caldicellulosiruptor obsidiansis OB47]
gi|312126894|ref|YP_003991768.1| 30S ribosomal protein S6 [Caldicellulosiruptor hydrothermalis
108]
gi|302575352|gb|ADL43143.1| ribosomal protein S6 [Caldicellulosiruptor obsidiansis OB47]
gi|311776913|gb|ADQ06399.1| ribosomal protein S6 [Caldicellulosiruptor hydrothermalis 108]
Length = 96
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ + ++ P + E+ LV + K++ NG L + +G +L Y I K + +G
Sbjct: 6 YETVFIISPALDDEARAALVEKF-KNLISSNGQLLTVEEWGKRRLAYKIDK----HAEGY 60
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M +S P +EL+ + + D ++R+L+VK
Sbjct: 61 YVLMQFISKPEFPRELERVYRITDGVIRFLIVK 93
>gi|320353928|ref|YP_004195267.1| 30S ribosomal protein S6 [Desulfobulbus propionicus DSM 2032]
gi|320122430|gb|ADW17976.1| ribosomal protein S6 [Desulfobulbus propionicus DSM 2032]
Length = 141
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ +L+P++ ++ E++ R + G G + + +G +L Y I K
Sbjct: 1 MRHYETTFILRPNLGEDQFTEIIDRTTAIINGDEGSIICLDRWGIKRLAYEINK----EV 56
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
QG + + + E++ + + +DR+LR+L VK
Sbjct: 57 QGYYVYLNYAAPGKTVDEIERIFRIDDRVLRYLTVK 92
>gi|168008110|ref|XP_001756750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691988|gb|EDQ78347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKK-----LDGR 58
Y+ M +L+P + +E + L R + + G+ ++ + G L Y IK R
Sbjct: 18 YETMTVLRPDITEEQRLALTQRYEESIIAGGGLDVEMFNRGMQPLAYNIKTKNMAGFANR 77
Query: 59 YYQGQLMQMTMMSTPNINKELQ-YLNKEDRLLR 90
Y G + T ++ P K +Q LN++D ++R
Sbjct: 78 YLDGIYLLFTYVTKPESQKAIQDRLNRDDDIIR 110
>gi|57242165|ref|ZP_00370105.1| 30S ribosomal protein S6 Cj1070 [Campylobacter upsaliensis RM3195]
gi|57017357|gb|EAL54138.1| 30S ribosomal protein S6 Cj1070 [Campylobacter upsaliensis RM3195]
Length = 125
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 4 YDCMLLLKPHVRKESL---MELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
Y+ + +LKP + +E + +E V K + +NG + + GT +L Y IKK Y
Sbjct: 4 YEVLFILKPTLTEEEVSAKLEFV----KEILSKNGAEIQTVVPMGTRKLAYKIKK----Y 55
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGMK 100
+G + + N+ EL+ L + ++R+L+VK+ K
Sbjct: 56 ERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKK 97
>gi|384484150|gb|EIE76330.1| 30S ribosomal protein S6 [Rhizopus delemar RA 99-880]
Length = 111
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP Y+ + + + ++ + +L +L+ K V R GV+ + G +++ + IK+ +
Sbjct: 1 MPFYELVCIARHNIVESNLKDLLKTSAKQVLNRGGVVRGFDNLGDMKIPHRIKRHQEYFT 60
Query: 61 QGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVK 95
G+ M + P + ++L + L + R+LR +K
Sbjct: 61 DGRYWTMHFDANPLVVQDLGKKLAVDTRVLRHTFIK 96
>gi|169847060|ref|XP_001830242.1| hypothetical protein CC1G_12771 [Coprinopsis cinerea
okayama7#130]
gi|116508688|gb|EAU91583.1| hypothetical protein CC1G_12771 [Coprinopsis cinerea
okayama7#130]
Length = 119
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLY + K + + + EL+ + HV GV+ I S GT L +K+
Sbjct: 1 MPLYQMFCITKHYPEYKHIRELIRQSATHVMKAGGVVRKIESSGTRTLPQRMKRQGPYVD 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKED-RLLRWLLVK 95
G + + P + L + + D R+LRW ++K
Sbjct: 61 IGDYWSLYFDTNPRTLRSLNGIMRRDPRVLRWTVLK 96
>gi|326391892|ref|ZP_08213402.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus JW 200]
gi|392940002|ref|ZP_10305646.1| ribosomal protein S6 [Thermoanaerobacter siderophilus SR4]
gi|325992054|gb|EGD50536.1| ribosomal protein S6 [Thermoanaerobacter ethanolicus JW 200]
gi|392291752|gb|EIW00196.1| ribosomal protein S6 [Thermoanaerobacter siderophilus SR4]
Length = 95
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +L P + +E L+ R + G +T+ +G +L Y I K YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIIENGGEITNFDEWGKRKLAYPIDKKPEGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M S +++EL+ + K D +LR+L+++
Sbjct: 61 ----VLMNFNSNSKVSQELERVYKITDGVLRYLIIR 92
>gi|408907557|emb|CCM11359.2| SSU ribosomal protein S6p [Helicobacter heilmannii ASB1.4]
Length = 140
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +LKP + +E L +A + + + GV+ + G L Y I+K YY
Sbjct: 1 MKHYETMFILKPTLVEEELKSKIAFYQEVITNQGGVIANTLDMGARHLAYEIQKHKRGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVKHRGMKNGK 103
+ + P EL+ L + + +LR++++K+ K K
Sbjct: 61 ----FVIYFQAEPAAVLELERLYRINEDVLRFIILKYENKKEQK 100
>gi|319957605|ref|YP_004168868.1| 30S ribosomal protein s6 [Nitratifractor salsuginis DSM 16511]
gi|319420009|gb|ADV47119.1| SSU ribosomal protein S6P [Nitratifractor salsuginis DSM 16511]
Length = 154
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + ++KP + E + +ARV + + G L G +L Y I+K + YY
Sbjct: 1 MNCYETLFVVKPTLTAEEIEGQIARVKEIIAENGGELKATDEMGMRRLAYPIEKQERGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVKHRGMKNGKE-ARYAETSEADLKKYG 119
++ T S I E Q L + +LR++ VK+ N KE A + + EA KK
Sbjct: 61 --TVVYYTAPSEMVIELERQ-LRYNEEILRFMTVKY---TNKKELAVFEKMVEAANKKPA 114
Query: 120 P 120
P
Sbjct: 115 P 115
>gi|86151148|ref|ZP_01069364.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 260.94]
gi|86152790|ref|ZP_01070995.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|121612432|ref|YP_001000748.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
81-176]
gi|153951510|ref|YP_001397814.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. doylei
269.97]
gi|157415331|ref|YP_001482587.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81116]
gi|167005668|ref|ZP_02271426.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81-176]
gi|283956467|ref|ZP_06373947.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1336]
gi|315124555|ref|YP_004066559.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|415745430|ref|ZP_11474886.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 327]
gi|419570342|ref|ZP_14107390.1| 30S ribosomal protein S6 [Campylobacter coli 7--1]
gi|419571590|ref|ZP_14108539.1| 30S ribosomal protein S6 [Campylobacter coli 132-6]
gi|419606049|ref|ZP_14140431.1| 30S ribosomal protein S6 [Campylobacter coli LMG 9860]
gi|419618219|ref|ZP_14151770.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
129-258]
gi|419621631|ref|ZP_14154882.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
23216]
gi|419627148|ref|ZP_14160059.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|419635832|ref|ZP_14168125.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 55037]
gi|419640796|ref|ZP_14172715.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
23357]
gi|419642640|ref|ZP_14174424.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|419651667|ref|ZP_14182759.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
2008-894]
gi|419655139|ref|ZP_14185997.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
2008-988]
gi|419659195|ref|ZP_14189734.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
2008-979]
gi|419669200|ref|ZP_14198994.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
1997-11]
gi|419682501|ref|ZP_14211233.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1213]
gi|419693682|ref|ZP_14221666.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
9872]
gi|419697387|ref|ZP_14225121.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
23211]
gi|166226817|sp|A7H2T4.1|RS6_CAMJD RecName: Full=30S ribosomal protein S6
gi|166226818|sp|A1W057.1|RS6_CAMJJ RecName: Full=30S ribosomal protein S6
gi|189045458|sp|A8FMC3.1|RS6_CAMJ8 RecName: Full=30S ribosomal protein S6
gi|85842318|gb|EAQ59564.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843675|gb|EAQ60885.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87249295|gb|EAQ72256.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81-176]
gi|152938956|gb|ABS43697.1| ribosomal protein S6 [Campylobacter jejuni subsp. doylei 269.97]
gi|157386295|gb|ABV52610.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 81116]
gi|283792187|gb|EFC30976.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1336]
gi|315018277|gb|ADT66370.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315932205|gb|EFV11148.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 327]
gi|380547589|gb|EIA71508.1| 30S ribosomal protein S6 [Campylobacter coli 7--1]
gi|380553279|gb|EIA76801.1| 30S ribosomal protein S6 [Campylobacter coli 132-6]
gi|380587437|gb|EIB08636.1| 30S ribosomal protein S6 [Campylobacter coli LMG 9860]
gi|380595304|gb|EIB16049.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
129-258]
gi|380601640|gb|EIB21950.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
23216]
gi|380607159|gb|EIB27035.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|380611674|gb|EIB31218.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 55037]
gi|380618940|gb|EIB38047.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
23357]
gi|380624204|gb|EIB42866.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|380630927|gb|EIB49142.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
2008-894]
gi|380637468|gb|EIB55099.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
2008-988]
gi|380640036|gb|EIB57501.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
2008-979]
gi|380647863|gb|EIB64752.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
1997-11]
gi|380661462|gb|EIB77358.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1213]
gi|380672303|gb|EIB87476.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
9872]
gi|380678369|gb|EIB93223.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni LMG
23211]
Length = 125
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 4 YDCMLLLKPHVRKESL---MELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
Y+ + +LKP + +E + +E V K V +NG + + GT +L Y IKK Y
Sbjct: 4 YEVLFILKPTLTEEEVNAKLEFV----KEVLTKNGAEIETVVPMGTRKLAYKIKK----Y 55
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGMK 100
+G + + N+ EL+ L + ++R+L+VK+ K
Sbjct: 56 ERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKK 97
>gi|110598898|ref|ZP_01387147.1| ribosomal protein S6 [Chlorobium ferrooxidans DSM 13031]
gi|110339489|gb|EAT58015.1| ribosomal protein S6 [Chlorobium ferrooxidans DSM 13031]
Length = 133
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 3 LYDCMLLLKPHVRKESL---MELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRY 59
LY+C +++ ++ E++ MELV RV + + G ++ + G + Y IKK Y
Sbjct: 6 LYECTVIIDGGLQDEAITAAMELVQRV---ITEKGGSISGVLEIGRRKTAYPIKKRTIGY 62
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRG 98
Y + P + E++ L E+ LLR+L+++ G
Sbjct: 63 YA----HIEFTGAPGVIAEIEKVLRYEEDLLRYLIIQLTG 98
>gi|312621640|ref|YP_004023253.1| 30S ribosomal protein S6 [Caldicellulosiruptor kronotskyensis
2002]
gi|312202107|gb|ADQ45434.1| ribosomal protein S6 [Caldicellulosiruptor kronotskyensis 2002]
Length = 96
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ + ++ P + E+ L+ + K++ NG L ++ +G +L Y I K + +G
Sbjct: 6 YETVFIISPTLDDEARNSLIEKF-KNLISSNGQLLNVEEWGKRRLAYKIDK----HAEGY 60
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M +S P +EL+ + + D ++R+L+VK
Sbjct: 61 YVLMQFISKPEFPRELERVYRITDGVIRFLIVK 93
>gi|154249362|ref|YP_001410187.1| 30S ribosomal protein S6 [Fervidobacterium nodosum Rt17-B1]
gi|189045467|sp|A7HKU7.1|RS6_FERNB RecName: Full=30S ribosomal protein S6
gi|154153298|gb|ABS60530.1| ribosomal protein S6 [Fervidobacterium nodosum Rt17-B1]
Length = 124
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGR-NGVLTDITSFGTVQLGYGIKKLDGRY 59
M +Y+ M ++KP V +E +LV V K + R + + +G +L Y I G+Y
Sbjct: 1 MRIYETMFIIKPDVSEEERNKLVENVKKFLEERVKAQVETVDRWGIRKLAYKI----GKY 56
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGMKNGKEARYA 108
++G M S +L+ Y +RW + ++ KE R A
Sbjct: 57 FEGDYTVMYFRSNGQGLDQLENYFKVHPEFMRWQTFRREDLEK-KERRAA 105
>gi|242310275|ref|ZP_04809430.1| 30S ribosomal protein S6 [Helicobacter pullorum MIT 98-5489]
gi|239523572|gb|EEQ63438.1| 30S ribosomal protein S6 [Helicobacter pullorum MIT 98-5489]
Length = 145
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 19/137 (13%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M ++KP + +E +++ + + G ++ G L Y IKK YY
Sbjct: 1 MRFYETMFVVKPTLTQEEIVQKIDFYKTAILNNGGEISATLDMGMRNLAYEIKKNKRGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVKH--------------RGMKNGKEA 105
+ + P + EL+ L + + +LR++++K+ R + N K
Sbjct: 61 ----FVIYFKAEPKLVLELERLYRINEDILRFIVIKYDSKKEQKAWETLVDRAINNKKAT 116
Query: 106 RYAETSEADLKKYGPSA 122
E E ++K P A
Sbjct: 117 PLKEPKEKAVEKEAPKA 133
>gi|289579515|ref|YP_003478142.1| 30S ribosomal protein S6 [Thermoanaerobacter italicus Ab9]
gi|297545638|ref|YP_003677940.1| 30S ribosomal protein S6 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289529228|gb|ADD03580.1| ribosomal protein S6 [Thermoanaerobacter italicus Ab9]
gi|296843413|gb|ADH61929.1| ribosomal protein S6 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 95
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ M +L P + +E L+ R + G +T+ +G +L Y I K YY
Sbjct: 1 MRSYETMYILSPDLSEEERKGLIERFKNLIVENGGEITNFDEWGKRKLAYPIDKKPEGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M S +++EL+ + K D +LR+L+++
Sbjct: 61 ----VLMNFNSDSKVSQELERVYKITDGVLRYLIIR 92
>gi|433447840|ref|ZP_20411216.1| 30S ribosomal protein S6 [Anoxybacillus flavithermus TNO-09.006]
gi|431999681|gb|ELK20597.1| 30S ribosomal protein S6 [Anoxybacillus flavithermus TNO-09.006]
Length = 95
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
M Y+ M +++P++ +E+ +V R +V NG +T++ +G +L Y I+K Y
Sbjct: 1 MRKYEIMYIIRPNMEEEARKAVVERFN-NVLTENGAEITNVKEWGKRRLAYEIQKFRDGY 59
Query: 60 YQGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
Y M + +++ P +E L + + ++R ++VK
Sbjct: 60 Y----MILNVVAKPAAVQEFDRLARISEDIIRHIVVK 92
>gi|291548257|emb|CBL21365.1| SSU ribosomal protein S6P [Ruminococcus sp. SR1/5]
Length = 95
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKL-DGRY 59
M Y+ L++ + E+ +V + ++ NGV+T++ +G +L Y I+K+ +G Y
Sbjct: 1 MNKYELALVVSAKLEDEARDAVVEKAKGYITRYNGVITEVEEWGKKKLAYEIQKMHEGFY 60
Query: 60 YQGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVK 95
Y Q + I + ++ + D +LR+L+VK
Sbjct: 61 YFIQF-EADSQCPAEIERHVRIM---DNVLRYLVVK 92
>gi|70945193|ref|XP_742442.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521430|emb|CAH75062.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 114
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRY 59
M LY+ + L H++K+ + L+ V NG + I G + + IKK G +
Sbjct: 1 MVLYESYIALNKHIKKDDVKNLMKNFHFIVNKYNGNIVSINDLGWRKFAFCIKKPKVGTF 60
Query: 60 YQGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVKHRGMKNGKEARYAETSE 112
Y G+ +T S ++L + + +LR+L K + N A ++ E
Sbjct: 61 YFGRFYCITFYSNSKSIRDLNELFHSNTYILRFLNTKMKYRSNFLVAPFSHIIE 114
>gi|346722808|ref|YP_001180128.2| 30S ribosomal protein S6 [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|345106779|gb|ABP66937.2| ribosomal protein S6 [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 96
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ + ++ P + E+ L+ + K++ NG L + +G +L Y I K + +G
Sbjct: 6 YETVFIISPTLDDEARANLIEKF-KNLISSNGQLLTVEEWGKRRLAYKIDK----HAEGY 60
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M +S P +EL+ + + D ++R+L+VK
Sbjct: 61 YVLMQFISKPEFPRELERVYRITDGVIRFLIVK 93
>gi|419548909|ref|ZP_14087521.1| 30S ribosomal protein S6 [Campylobacter coli 2685]
gi|419588189|ref|ZP_14124014.1| 30S ribosomal protein S6 [Campylobacter coli 317/04]
gi|419612661|ref|ZP_14146534.1| 30S ribosomal protein S6 [Campylobacter coli H9]
gi|380526869|gb|EIA52297.1| 30S ribosomal protein S6 [Campylobacter coli 2685]
gi|380570613|gb|EIA93032.1| 30S ribosomal protein S6 [Campylobacter coli 317/04]
gi|380589827|gb|EIB10864.1| 30S ribosomal protein S6 [Campylobacter coli H9]
Length = 125
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 4 YDCMLLLKPHVRKESL---MELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
Y+ + +LKP + +E + +E V K V +NG + + GT +L Y IKK Y
Sbjct: 4 YEVLFILKPTLAEEEVNAKLEFV----KEVLVKNGAEIETVVPMGTRKLAYKIKK----Y 55
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGMK 100
+G + + N+ EL+ L + ++R+L+VK+ K
Sbjct: 56 ERGTYFVIYFKAPTNLIAELERILRITEEVIRFLIVKYENKK 97
>gi|57167954|ref|ZP_00367093.1| 30S ribosomal protein S6 Cj1070 [Campylobacter coli RM2228]
gi|305431896|ref|ZP_07401063.1| 30S ribosomal protein S6 [Campylobacter coli JV20]
gi|419536012|ref|ZP_14075499.1| 30S ribosomal protein S6 [Campylobacter coli 111-3]
gi|419538163|ref|ZP_14077525.1| 30S ribosomal protein S6 [Campylobacter coli 90-3]
gi|419541016|ref|ZP_14080239.1| 30S ribosomal protein S6 [Campylobacter coli Z163]
gi|419542408|ref|ZP_14081534.1| 30S ribosomal protein S6 [Campylobacter coli 2548]
gi|419545143|ref|ZP_14084070.1| 30S ribosomal protein S6 [Campylobacter coli 2553]
gi|419546438|ref|ZP_14085194.1| 30S ribosomal protein S6 [Campylobacter coli 2680]
gi|419549779|ref|ZP_14088313.1| 30S ribosomal protein S6 [Campylobacter coli 2688]
gi|419552851|ref|ZP_14091137.1| 30S ribosomal protein S6 [Campylobacter coli 2692]
gi|419554888|ref|ZP_14093011.1| 30S ribosomal protein S6 [Campylobacter coli 2698]
gi|419556701|ref|ZP_14094679.1| 30S ribosomal protein S6 [Campylobacter coli 84-2]
gi|419558731|ref|ZP_14096578.1| 30S ribosomal protein S6 [Campylobacter coli 80352]
gi|419560924|ref|ZP_14098557.1| 30S ribosomal protein S6 [Campylobacter coli 86119]
gi|419562347|ref|ZP_14099862.1| 30S ribosomal protein S6 [Campylobacter coli 1091]
gi|419563593|ref|ZP_14100992.1| 30S ribosomal protein S6 [Campylobacter coli 1098]
gi|419566405|ref|ZP_14103665.1| 30S ribosomal protein S6 [Campylobacter coli 1148]
gi|419568960|ref|ZP_14106086.1| 30S ribosomal protein S6 [Campylobacter coli 1417]
gi|419574028|ref|ZP_14110803.1| 30S ribosomal protein S6 [Campylobacter coli 1891]
gi|419575997|ref|ZP_14112668.1| 30S ribosomal protein S6 [Campylobacter coli 1909]
gi|419576665|ref|ZP_14113234.1| 30S ribosomal protein S6 [Campylobacter coli 59-2]
gi|419578873|ref|ZP_14115296.1| 30S ribosomal protein S6 [Campylobacter coli 1948]
gi|419581407|ref|ZP_14117709.1| 30S ribosomal protein S6 [Campylobacter coli 1957]
gi|419582871|ref|ZP_14119064.1| 30S ribosomal protein S6 [Campylobacter coli 1961]
gi|419584390|ref|ZP_14120460.1| 30S ribosomal protein S6 [Campylobacter coli 202/04]
gi|419586524|ref|ZP_14122485.1| 30S ribosomal protein S6 [Campylobacter coli 67-8]
gi|419591342|ref|ZP_14126695.1| 30S ribosomal protein S6 [Campylobacter coli 37/05]
gi|419593331|ref|ZP_14128556.1| 30S ribosomal protein S6 [Campylobacter coli LMG 9854]
gi|419595098|ref|ZP_14130211.1| 30S ribosomal protein S6 [Campylobacter coli LMG 23336]
gi|419596564|ref|ZP_14131564.1| 30S ribosomal protein S6 [Campylobacter coli LMG 23341]
gi|419598528|ref|ZP_14133408.1| 30S ribosomal protein S6 [Campylobacter coli LMG 23342]
gi|419600779|ref|ZP_14135525.1| 30S ribosomal protein S6 [Campylobacter coli LMG 23344]
gi|419602039|ref|ZP_14136624.1| 30S ribosomal protein S6 [Campylobacter coli 151-9]
gi|419604446|ref|ZP_14138913.1| 30S ribosomal protein S6 [Campylobacter coli LMG 9853]
gi|419608746|ref|ZP_14142930.1| 30S ribosomal protein S6 [Campylobacter coli H6]
gi|419609945|ref|ZP_14144021.1| 30S ribosomal protein S6 [Campylobacter coli H8]
gi|419614086|ref|ZP_14147876.1| 30S ribosomal protein S6 [Campylobacter coli H56]
gi|419616964|ref|ZP_14150597.1| 30S ribosomal protein S6 [Campylobacter coli Z156]
gi|57020328|gb|EAL56997.1| 30S ribosomal protein S6 Cj1070 [Campylobacter coli RM2228]
gi|304444980|gb|EFM37626.1| 30S ribosomal protein S6 [Campylobacter coli JV20]
gi|380515455|gb|EIA41619.1| 30S ribosomal protein S6 [Campylobacter coli Z163]
gi|380518979|gb|EIA45068.1| 30S ribosomal protein S6 [Campylobacter coli 90-3]
gi|380519307|gb|EIA45390.1| 30S ribosomal protein S6 [Campylobacter coli 111-3]
gi|380522433|gb|EIA48116.1| 30S ribosomal protein S6 [Campylobacter coli 2680]
gi|380523257|gb|EIA48910.1| 30S ribosomal protein S6 [Campylobacter coli 2548]
gi|380523856|gb|EIA49491.1| 30S ribosomal protein S6 [Campylobacter coli 2553]
gi|380530407|gb|EIA55488.1| 30S ribosomal protein S6 [Campylobacter coli 2692]
gi|380531641|gb|EIA56658.1| 30S ribosomal protein S6 [Campylobacter coli 2698]
gi|380532547|gb|EIA57524.1| 30S ribosomal protein S6 [Campylobacter coli 2688]
gi|380534451|gb|EIA59241.1| 30S ribosomal protein S6 [Campylobacter coli 84-2]
gi|380536533|gb|EIA61156.1| 30S ribosomal protein S6 [Campylobacter coli 86119]
gi|380538745|gb|EIA63183.1| 30S ribosomal protein S6 [Campylobacter coli 80352]
gi|380541243|gb|EIA65516.1| 30S ribosomal protein S6 [Campylobacter coli 1091]
gi|380543707|gb|EIA67879.1| 30S ribosomal protein S6 [Campylobacter coli 1098]
gi|380544638|gb|EIA68656.1| 30S ribosomal protein S6 [Campylobacter coli 1417]
gi|380546637|gb|EIA70578.1| 30S ribosomal protein S6 [Campylobacter coli 1148]
gi|380550285|gb|EIA73960.1| 30S ribosomal protein S6 [Campylobacter coli 1891]
gi|380552169|gb|EIA75735.1| 30S ribosomal protein S6 [Campylobacter coli 1909]
gi|380558611|gb|EIA81787.1| 30S ribosomal protein S6 [Campylobacter coli 1948]
gi|380559357|gb|EIA82516.1| 30S ribosomal protein S6 [Campylobacter coli 59-2]
gi|380559566|gb|EIA82718.1| 30S ribosomal protein S6 [Campylobacter coli 1957]
gi|380564184|gb|EIA87001.1| 30S ribosomal protein S6 [Campylobacter coli 202/04]
gi|380564445|gb|EIA87252.1| 30S ribosomal protein S6 [Campylobacter coli 1961]
gi|380566086|gb|EIA88778.1| 30S ribosomal protein S6 [Campylobacter coli 67-8]
gi|380568541|gb|EIA91007.1| 30S ribosomal protein S6 [Campylobacter coli 37/05]
gi|380571095|gb|EIA93504.1| 30S ribosomal protein S6 [Campylobacter coli LMG 9854]
gi|380574311|gb|EIA96416.1| 30S ribosomal protein S6 [Campylobacter coli LMG 23336]
gi|380575682|gb|EIA97752.1| 30S ribosomal protein S6 [Campylobacter coli LMG 23341]
gi|380577087|gb|EIA99120.1| 30S ribosomal protein S6 [Campylobacter coli LMG 23342]
gi|380580175|gb|EIB01942.1| 30S ribosomal protein S6 [Campylobacter coli LMG 9853]
gi|380581904|gb|EIB03612.1| 30S ribosomal protein S6 [Campylobacter coli 151-9]
gi|380582623|gb|EIB04254.1| 30S ribosomal protein S6 [Campylobacter coli LMG 23344]
gi|380584999|gb|EIB06375.1| 30S ribosomal protein S6 [Campylobacter coli H6]
gi|380591168|gb|EIB12158.1| 30S ribosomal protein S6 [Campylobacter coli H8]
gi|380593280|gb|EIB14115.1| 30S ribosomal protein S6 [Campylobacter coli H56]
gi|380594653|gb|EIB15439.1| 30S ribosomal protein S6 [Campylobacter coli Z156]
Length = 125
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 4 YDCMLLLKPHVRKESL---MELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
Y+ + +LKP + +E + +E V K V +NG + + GT +L Y IKK Y
Sbjct: 4 YEVLFILKPTLTEEEVNAKLEFV----KEVLVKNGAEIETVVPMGTRKLAYKIKK----Y 55
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGMK 100
+G + + N+ EL+ L + ++R+L+VK+ K
Sbjct: 56 ERGTYFVIYFKAPTNLIAELERILRITEEVIRFLIVKYENKK 97
>gi|288817695|ref|YP_003432042.1| ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
gi|384128456|ref|YP_005511069.1| 30S ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
gi|288787094|dbj|BAI68841.1| ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
gi|308751293|gb|ADO44776.1| ribosomal protein S6 [Hydrogenobacter thermophilus TK-6]
Length = 110
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLD-GRYYQG 62
Y+ + +LKP + +E + + + + + + G + +G +L Y IK GRY+
Sbjct: 12 YESVFVLKPTLTEEEVQRRLQEIRETIQKKGGQILQEEDWGIKKLAYPIKNFQHGRYF-- 69
Query: 63 QLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVKHRGMKNGKEA 105
+ ++T S P + L + K D ++RWL + + +K GK A
Sbjct: 70 -IFRIT-SSNPELPNHLDFYYKISDDIIRWLNFQVK-VKEGKNA 110
>gi|398344871|ref|ZP_10529574.1| hypothetical protein LinasL1_17872 [Leptospira inadai serovar Lyme
str. 10]
Length = 405
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 93 LVKHRGMKNGKEARYAETSEADLKKYGPSAIYDFEGIEEEDNDEEE-YDS 141
+ KH KNG+ +AE S ++G S ++ G+E EDN +E YD+
Sbjct: 296 IFKHLKFKNGRRLTFAEISATGAWEFGNSKVFFDHGMEWEDNTPQEIYDA 345
>gi|88596295|ref|ZP_01099532.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 84-25]
gi|283954633|ref|ZP_06372151.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 414]
gi|415730609|ref|ZP_11473120.1| Ribosomal protein S6 [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|419653745|ref|ZP_14184707.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
2008-872]
gi|419664813|ref|ZP_14194892.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
1997-7]
gi|419674644|ref|ZP_14203931.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
110-21]
gi|419680835|ref|ZP_14209687.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
140-16]
gi|419686074|ref|ZP_14214514.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1798]
gi|419690207|ref|ZP_14218419.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1893]
gi|419691703|ref|ZP_14219816.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1928]
gi|88191136|gb|EAQ95108.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 84-25]
gi|283793825|gb|EFC32576.1| ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 414]
gi|315927922|gb|EFV07244.1| Ribosomal protein S6 [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|380632148|gb|EIB50262.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
2008-872]
gi|380644493|gb|EIB61675.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
1997-7]
gi|380652925|gb|EIB69381.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
110-21]
gi|380659537|gb|EIB75512.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni
140-16]
gi|380665309|gb|EIB80882.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1798]
gi|380669248|gb|EIB84537.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1893]
gi|380671834|gb|EIB87029.1| 30S ribosomal protein S6 [Campylobacter jejuni subsp. jejuni 1928]
Length = 125
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 4 YDCMLLLKPHVRKESL---MELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
Y+ + +LKP + +E + +E V K V +NG + + GT +L Y IKK Y
Sbjct: 4 YEVLFILKPTLTEEEVNAKLEFV----KEVLIKNGAEIETVVPMGTRKLAYKIKK----Y 55
Query: 60 YQGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGMK 100
+G + + N+ EL+ L + ++R+L+VK+ K
Sbjct: 56 ERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKK 97
>gi|312792726|ref|YP_004025649.1| 30S ribosomal protein S6 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|344997082|ref|YP_004799425.1| 30S ribosomal protein S6 [Caldicellulosiruptor lactoaceticus 6A]
gi|312179866|gb|ADQ40036.1| ribosomal protein S6 [Caldicellulosiruptor kristjanssonii 177R1B]
gi|343965301|gb|AEM74448.1| 30S ribosomal protein S6 [Caldicellulosiruptor lactoaceticus 6A]
Length = 96
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ + ++ P + E+ LV + K++ NG L + +G +L Y I K + +G
Sbjct: 6 YETVFIISPTLDDEARNALVEKF-KNLISSNGQLLTVEEWGKRRLAYKIDK----HAEGY 60
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
+ M +S P +EL+ + + D ++R+L+VK
Sbjct: 61 YVLMQFISKPEFPRELERVYRITDGVIRFLIVK 93
>gi|148260512|ref|YP_001234639.1| 30S ribosomal protein S6 [Acidiphilium cryptum JF-5]
gi|338986571|ref|ZP_08633586.1| RpsF [Acidiphilium sp. PM]
gi|166226792|sp|A5FYN8.1|RS6_ACICJ RecName: Full=30S ribosomal protein S6
gi|146402193|gb|ABQ30720.1| SSU ribosomal protein S6P [Acidiphilium cryptum JF-5]
gi|338206507|gb|EGO94628.1| RpsF [Acidiphilium sp. PM]
Length = 158
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MPLY+C+L+ + + ++ + + V V +G + +G L Y IKK
Sbjct: 1 MPLYECVLIARSEITQQQVDTIADAVTAQVESESGAVKKREYWGLRNLAYRIKK----NR 56
Query: 61 QGQLMQMTMMSTPNINKELQ-YLNKEDRLLRWLLVKHRGMKNGKEARYAETSEADLKKY- 118
+G + + + + P E++ L + +LR++ V+ + A A E +
Sbjct: 57 KGHYVLLGLDAEPATISEMERQLGLNEDVLRFMTVRVEDIDEAPSAPLARRGEDRDRDRG 116
Query: 119 --GPSAIYDFE-GIEEEDNDEEEYDSEDAERKEH 149
GP F+ G +D EEY + D R +
Sbjct: 117 FRGPKPAGRFDSGRRRGADDREEYRARDEYRSDR 150
>gi|340358695|ref|ZP_08681203.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 448 str.
F0400]
gi|339885832|gb|EGQ75523.1| 30S ribosomal protein S6 [Actinomyces sp. oral taxon 448 str.
F0400]
Length = 95
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ M++L P + ++ + ++ + V G + I ++G +L Y IKK +Y
Sbjct: 4 YEIMIILNPETDERTIAPTLEKLLQIVPSSGGTVDKIDTWGKRRLAYDIKKKSEGFY--- 60
Query: 64 LMQMTMMSTPNINKEL 79
+ + M +TP I +EL
Sbjct: 61 -IVVDMTTTPEIAQEL 75
>gi|154498401|ref|ZP_02036779.1| hypothetical protein BACCAP_02390 [Bacteroides capillosus ATCC
29799]
gi|150272469|gb|EDM99654.1| ribosomal protein S6 [Pseudoflavonifractor capillosus ATCC 29799]
Length = 98
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 4 YDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQ 63
Y+ + +L + +E+ LVA+ K + NG LT++ +G +L Y I + YY
Sbjct: 8 YEAVYILDADLGEEATAALVAKF-KTLVESNGTLTEVDEWGKRRLAYPINDKNDGYY--- 63
Query: 64 LMQMTMMSTPNINKELQYLNK-EDRLLRWLLV 94
+ MT S P+ EL + + D ++R L+V
Sbjct: 64 -VLMTFTSAPSFPLELDRIFRITDGVVRSLIV 94
>gi|403213821|emb|CCK68323.1| hypothetical protein KNAG_0A06660 [Kazachstania naganishii CBS
8797]
Length = 129
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 21 ELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQGQLMQMTMMSTPNINKE-L 79
EL+ VGK + GV+ I GT QL ++K ++++G M S+ + E L
Sbjct: 23 ELLTSVGKLILNNRGVIRSIIPVGTEQLSEIMRKDQEQHFRGYRFVMLFDSSAAVQSEIL 82
Query: 80 QYLNKEDRLLRWLLVK 95
+ L K+ R++R ++K
Sbjct: 83 RTLKKDPRVIRSSIIK 98
>gi|212640666|ref|YP_002317186.1| 30S ribosomal protein S6 [Anoxybacillus flavithermus WK1]
gi|212562146|gb|ACJ35201.1| Ribosomal protein S6 [Anoxybacillus flavithermus WK1]
Length = 98
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGV-LTDITSFGTVQLGYGIKKLDGRY 59
M Y+ M +++P++ +E+ +V R +V NG +T++ +G +L Y I+K Y
Sbjct: 4 MRKYEIMYIIRPNMEEEARKAVVERFN-NVLTENGAEITNVKEWGKRRLAYEIEKFRDGY 62
Query: 60 YQGQLMQMTMMSTPNINKELQYLNK-EDRLLRWLLVK 95
Y M + +++ P +E L + + ++R ++VK
Sbjct: 63 Y----MILNVVAKPAAVQEFDRLARISEDIIRHIVVK 95
>gi|331083587|ref|ZP_08332698.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 6_1_63FAA]
gi|330403798|gb|EGG83350.1| 30S ribosomal protein S6 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 95
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ L++ + E+ +V + ++ NG +T++ +G +L Y I+K+ YY
Sbjct: 1 MNKYELALVVNAKIDDEARAAVVEKAKDYIARYNGTVTEVEEWGKKRLAYEIQKMREGYY 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKEDRLLRWLLVK 95
+ + ++ + D +LR+L+VK
Sbjct: 61 YFIQFESDAACPAEVEGRIRIM---DNVLRYLVVK 92
>gi|153956492|ref|YP_001397257.1| 30S ribosomal protein S6 [Clostridium kluyveri DSM 555]
gi|219856795|ref|YP_002473917.1| hypothetical protein CKR_3452 [Clostridium kluyveri NBRC 12016]
gi|189045461|sp|A5N440.1|RS6_CLOK5 RecName: Full=30S ribosomal protein S6
gi|254765231|sp|B9DXR0.1|RS6_CLOK1 RecName: Full=30S ribosomal protein S6
gi|146349350|gb|EDK35886.1| RpsF [Clostridium kluyveri DSM 555]
gi|219570519|dbj|BAH08503.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 95
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
M Y+ + +L P + +E V + + GV+ ++ +G +L Y IKK++ YY
Sbjct: 1 MGKYETIFILHPSLDEEGYKANVEKFKGVIENGGGVIENVDIWGKRKLAYEIKKVNEGYY 60
Query: 61 QGQLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVK 95
+T + P + KEL + D ++R ++VK
Sbjct: 61 T----LITFNADPTLPKELDRVFRITDTVVRHIIVK 92
>gi|396476138|ref|XP_003839946.1| similar to 37S ribosomal protein Mrp17 [Leptosphaeria maculans
JN3]
gi|312216517|emb|CBX96467.1| similar to 37S ribosomal protein Mrp17 [Leptosphaeria maculans
JN3]
Length = 112
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 3 LYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYYQG 62
LY+ + +++P R + E+ GK V GV+ +T++GT L + KKL ++ G
Sbjct: 2 LYEMIGVVRPG-RLSEVKEIARTAGKIVLDARGVVRGVTNWGTFLLPHPAKKLQSTHHYG 60
Query: 63 QLMQMTMMSTPNINKEL-QYLNKEDRLLRWLLVK 95
M ++ L + ++ + RL+R+ +VK
Sbjct: 61 HHFIMRFDASARAQHTLRKTMSLDPRLIRYSIVK 94
>gi|403413162|emb|CCL99862.1| predicted protein [Fibroporia radiculosa]
Length = 131
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 1 MPLYDCMLLLKPHVRKESLMELVARVGKHVYGRNGVLTDITSFGTVQLGYGIKKLDGRYY 60
MP Y + + + + L +LV + HV GV+ + GT+ L +++ +
Sbjct: 1 MPFYQMLCIAAHYPEYQHLKQLVHQASSHVLTNGGVVRRFYNMGTLSLPQRMRRHKQYHQ 60
Query: 61 QGQLMQMTMMSTPNINKELQYLNKED-RLLRWLLVK 95
G M ++P +L + + D R++RW ++K
Sbjct: 61 IGDYWMMYFDASPRTLHDLNAIMRRDPRVVRWTMLK 96
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,444,386,249
Number of Sequences: 23463169
Number of extensions: 99661865
Number of successful extensions: 516398
Number of sequences better than 100.0: 320
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 516100
Number of HSP's gapped (non-prelim): 462
length of query: 149
length of database: 8,064,228,071
effective HSP length: 112
effective length of query: 37
effective length of database: 9,731,320,439
effective search space: 360058856243
effective search space used: 360058856243
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)