BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031987
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B0JTF9|COFH_MICAN FO synthase subunit 2 OS=Microcystis aeruginosa (strain NIES-843)
GN=cofH PE=3 SV=1
Length = 378
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 31 KPTTPRVSKSKPVMASTTTTTAATAEIFGVKIEKNPPQ-SKLSELGVTSWPKWGC 84
KP RV + +P++A T TA G I+ + P KL G T WGC
Sbjct: 277 KPLRNRVGQDQPILADTLKLTAVARIYLGNSIKNHQPSWVKLGLQGATEALNWGC 331
>sp|Q9FZ27|GL22_ARATH Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana
GN=At1g02335 PE=2 SV=1
Length = 219
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 40 SKPVMASTTTTTAATAEIFGVKIEKNPPQSKLS-ELGVTSWPKWGC-PPSKFPWTFTATE 97
SKP + ++T +A T G +EK P + LS L + G PP P ATE
Sbjct: 64 SKPAVINSTMGSAVT----GANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPR---ATE 116
Query: 98 TMYLLEGKVIV-YVDGREGSF--EIGTGDLVVFPKGM 131
+Y+LEG++ V ++ F I G++ VFP+G+
Sbjct: 117 VVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGL 153
>sp|Q6N7A6|MTND_RHOPA Acireductone dioxygenase OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=mtnD PE=3 SV=1
Length = 165
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 94 TATETMYLLEGKVI--VYVDGREGSFEIGTGDLVVFPKGMKITW 135
E ++L+G I V VDG+ +G GD +V P G++ +
Sbjct: 93 AGDEIRHILDGAGIFGVIVDGQRADLHVGPGDFIVVPAGLEHNF 136
>sp|B3QG72|MTND_RHOPT Acireductone dioxygenase OS=Rhodopseudomonas palustris (strain
TIE-1) GN=mtnD PE=3 SV=1
Length = 165
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 94 TATETMYLLEGKVI--VYVDGREGSFEIGTGDLVVFPKGMKITW 135
E ++L+G I V VDG+ +G GD +V P G++ +
Sbjct: 93 AGDEIRHILDGAGIFGVIVDGQRADLHVGPGDFIVVPAGLEHNF 136
>sp|P28192|PTP2_CAEEL Tyrosine-protein phosphatase 2 OS=Caenorhabditis elegans GN=ptp-2
PE=2 SV=3
Length = 1159
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 28 PKSKPTTPRVSKSKPVMASTTTTTAATAEIFGVKIEKNPP--QSKLSELGVTSWPKWGCP 85
P + + + + S +T + I +KI K P + K+ +L WP G P
Sbjct: 759 PSQQDSPQTFGNYQVTLVSESTNAHFSHRILDLKIAKAVPAVERKVHQLHFMGWPDHGVP 818
Query: 86 PSKFP-WTFTATETMYLLEGKVIVYVD---GREGSF 117
S FP +F + G V+V+ GR GS+
Sbjct: 819 SSVFPLLSFVHYTSDIHSTGPVVVHCSAGVGRSGSY 854
>sp|P76555|EUTQ_ECOLI Ethanolamine utilization protein EutQ OS=Escherichia coli (strain
K12) GN=eutQ PE=4 SV=1
Length = 233
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 89 FPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHY 145
FPWT E +LEG++ V +G+ + GD++ PKG I + +V Y
Sbjct: 169 FPWTLNYDEIDMVLEGELHVRHEGQ--TMIAKAGDVMFIPKGSSIEFGTTSSVKFLY 223
>sp|Q811B3|ATS12_MOUSE A disintegrin and metalloproteinase with thrombospondin motifs 12
OS=Mus musculus GN=Adamts12 PE=1 SV=2
Length = 1600
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 21 SPLIIPIPKSKPTTPR-VSKSKPVMASTTTTTAATAEIFGVKIEKNPPQSK--------- 70
+P P P S PT P +S S P + S +T A+ + G+ + N Q++
Sbjct: 1033 APTSRPTPLSTPTVPESMSTSTPTINSLGSTIASQEDANGMGWQNNSTQAEEGSHFPTSS 1092
Query: 71 --LSELGVTSW 79
S++ VTSW
Sbjct: 1093 GSTSQVPVTSW 1103
>sp|Q14203|DCTN1_HUMAN Dynactin subunit 1 OS=Homo sapiens GN=DCTN1 PE=1 SV=3
Length = 1278
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 30 SKPTTPRVSKSKPVMASTTTTTAATAEIFGVKIEKNPPQSKLSELGVTSWPKWGCPPS 87
+ P TP S SK + T TTA T+++ G+K +K P K + T PK P S
Sbjct: 104 TSPETPDSSASKVLKREGTDTTAKTSKLRGLKPKKAPTARKTT----TRRPKPTRPAS 157
>sp|Q7SIC2|QDOI_ASPJA Quercetin 2,3-dioxygenase OS=Aspergillus japonicus PE=1 SV=1
Length = 350
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 91 WTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITW 135
W+F + EG+V+V + G + E+G+GD+ P G++ +
Sbjct: 268 WSFPGACAFQVQEGRVVVQI-GDYAATELGSGDVAFIPGGVEFKY 311
>sp|Q7Z3E5|ARMC9_HUMAN LisH domain-containing protein ARMC9 OS=Homo sapiens GN=ARMC9 PE=1
SV=2
Length = 817
Score = 30.0 bits (66), Expect = 5.3, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 9/57 (15%)
Query: 28 PKSKPTTPRVSKSKPVMASTTTTTAATAEIFGVK---------IEKNPPQSKLSELG 75
P+ PTTPR + P TT A F K ++ NPP++K S L
Sbjct: 729 PRPAPTTPRQPREAPQDPGNGVTTRECASAFTCKPRAPCTPEMLDWNPPKAKASVLA 785
>sp|Q9ZFV5|EUTQ_SALTY Ethanolamine utilization protein EutQ OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=eutQ PE=1 SV=1
Length = 229
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 89 FPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITW 135
FPWT E +LEG++ V +G + GD++ PKG I +
Sbjct: 165 FPWTLNYDEIDMVLEGELHVRHEGE--TMIAKAGDVMFIPKGSSIEF 209
>sp|A0LK15|SYL_SYNFM Leucine--tRNA ligase OS=Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB) GN=leuS PE=3 SV=1
Length = 829
Score = 29.3 bits (64), Expect = 8.7, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 44 MASTTTTTAATAEIFGVKIEKNPPQSKLSELGVTSWPKWGCP 85
MAS TA TA++ G + + Q +L + G++ WG P
Sbjct: 396 MASAEARTAITADLAGKGLGEQTVQYRLRDWGISRQRYWGAP 437
>sp|P92998|GL11_ARATH Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana
GN=GLP7 PE=2 SV=2
Length = 217
Score = 29.3 bits (64), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 24/107 (22%)
Query: 33 TTPRVSKSKPVMASTTTTTAATAEIFGVKIEKNPPQSKLSELGVT-SWPKWG----CPPS 87
+ P +K+KP M + T TT TA + G L+ +G+T + +G PP
Sbjct: 62 SRPGNTKTKPFMINVTVTT--TANLPG-----------LNTVGLTMARLDFGGSGVVPPH 108
Query: 88 KFPWTFTATETMYLLEGKVIV-YVD--GREGSFEIGTGDLVVFPKGM 131
P A+E L+G ++V +VD GR + E+ G+ VFPKG+
Sbjct: 109 VHPR---ASEVTVCLDGVLLVGFVDTSGRVFTQELHPGETFVFPKGL 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,761,073
Number of Sequences: 539616
Number of extensions: 1964206
Number of successful extensions: 8706
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 8629
Number of HSP's gapped (non-prelim): 96
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)