Query 031987
Match_columns 149
No_of_seqs 174 out of 1072
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 12:51:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3myx_A Uncharacterized protein 99.9 2.2E-24 7.5E-29 176.9 13.0 112 22-147 125-237 (238)
2 3es4_A Uncharacterized protein 99.9 6.6E-24 2.3E-28 157.6 9.0 76 72-148 37-113 (116)
3 3bcw_A Uncharacterized protein 99.9 3.2E-22 1.1E-26 148.3 9.3 111 22-147 8-119 (123)
4 1o5u_A Novel thermotoga mariti 99.8 1.5E-18 5.1E-23 124.3 10.7 86 61-147 15-100 (101)
5 2pyt_A Ethanolamine utilizatio 99.6 6.8E-16 2.3E-20 115.1 9.7 71 76-148 56-126 (133)
6 4axo_A EUTQ, ethanolamine util 99.6 3.9E-15 1.3E-19 114.5 9.4 71 76-148 65-135 (151)
7 3myx_A Uncharacterized protein 99.5 3.7E-14 1.3E-18 116.2 10.6 70 75-147 45-115 (238)
8 3lwc_A Uncharacterized protein 99.5 5E-13 1.7E-17 97.6 12.4 73 75-149 38-112 (119)
9 2i45_A Hypothetical protein; n 98.9 1.7E-09 5.8E-14 75.2 5.8 57 86-143 37-95 (107)
10 3fjs_A Uncharacterized protein 98.9 8.9E-09 3E-13 73.4 9.4 66 79-146 38-105 (114)
11 2pfw_A Cupin 2, conserved barr 98.9 1.5E-08 5.2E-13 70.6 10.3 67 79-147 36-104 (116)
12 1v70_A Probable antibiotics sy 98.9 9.9E-09 3.4E-13 69.0 8.7 67 79-147 30-101 (105)
13 3h8u_A Uncharacterized conserv 98.9 1.2E-08 4E-13 72.4 9.2 62 78-140 40-104 (125)
14 3l2h_A Putative sugar phosphat 98.9 9.9E-09 3.4E-13 76.4 9.0 66 79-146 48-120 (162)
15 4e2g_A Cupin 2 conserved barre 98.9 1.8E-08 6.3E-13 71.3 9.7 67 79-147 43-112 (126)
16 2gu9_A Tetracenomycin polyketi 98.8 3.1E-08 1E-12 67.9 10.1 68 77-146 21-95 (113)
17 1yhf_A Hypothetical protein SP 98.8 3.5E-08 1.2E-12 68.6 10.4 66 79-146 42-109 (115)
18 3i7d_A Sugar phosphate isomera 98.8 2.4E-08 8.3E-13 75.5 9.2 68 78-147 44-119 (163)
19 2ozj_A Cupin 2, conserved barr 98.8 3.2E-08 1.1E-12 69.2 8.9 63 82-146 43-107 (114)
20 3ibm_A Cupin 2, conserved barr 98.8 5.7E-08 2E-12 74.0 10.8 67 79-147 58-129 (167)
21 2q30_A Uncharacterized protein 98.8 2.9E-08 1E-12 68.0 8.0 68 79-147 35-106 (110)
22 2vpv_A Protein MIF2, MIF2P; nu 98.8 4.8E-08 1.6E-12 75.9 10.0 69 76-146 87-161 (166)
23 2opk_A Hypothetical protein; p 98.8 2.3E-08 7.9E-13 71.2 7.5 48 91-140 49-98 (112)
24 2fqp_A Hypothetical protein BP 98.8 3.2E-08 1.1E-12 68.0 7.8 66 80-145 21-91 (97)
25 3d82_A Cupin 2, conserved barr 98.7 3.4E-08 1.2E-12 66.8 7.6 55 87-143 40-96 (102)
26 2bnm_A Epoxidase; oxidoreducta 98.7 1E-07 3.5E-12 72.6 10.5 66 79-146 119-196 (198)
27 3ht1_A REMF protein; cupin fol 98.7 3.3E-08 1.1E-12 71.0 7.0 66 79-146 41-112 (145)
28 2o8q_A Hypothetical protein; c 98.7 7.3E-08 2.5E-12 69.1 8.8 50 89-139 56-107 (134)
29 3es1_A Cupin 2, conserved barr 98.7 4.6E-08 1.6E-12 76.3 7.3 69 77-147 79-151 (172)
30 3kgz_A Cupin 2 conserved barre 98.7 1.2E-07 4E-12 71.9 9.4 67 79-147 46-116 (156)
31 3rns_A Cupin 2 conserved barre 98.7 1.3E-07 4.6E-12 74.7 10.1 67 78-146 38-106 (227)
32 2oa2_A BH2720 protein; 1017534 98.7 1.9E-07 6.3E-12 68.9 10.1 65 79-145 45-120 (148)
33 2b8m_A Hypothetical protein MJ 98.6 1.4E-07 4.8E-12 66.1 8.5 58 81-140 31-91 (117)
34 3rns_A Cupin 2 conserved barre 98.6 1.5E-07 5.3E-12 74.3 9.6 69 77-147 153-224 (227)
35 1o4t_A Putative oxalate decarb 98.6 2.4E-07 8.2E-12 67.3 9.9 66 79-146 59-129 (133)
36 3jzv_A Uncharacterized protein 98.6 1.6E-07 5.6E-12 71.9 8.9 68 78-147 54-125 (166)
37 4h7l_A Uncharacterized protein 98.6 8.8E-08 3E-12 74.1 7.2 54 89-146 60-115 (157)
38 4i4a_A Similar to unknown prot 98.6 3.1E-07 1.1E-11 65.0 9.3 56 82-139 39-96 (128)
39 3cew_A Uncharacterized cupin p 98.6 3.5E-07 1.2E-11 64.9 9.4 59 79-139 28-90 (125)
40 1lr5_A Auxin binding protein 1 98.6 2.6E-07 9E-12 68.8 9.1 69 79-147 43-123 (163)
41 1vj2_A Novel manganese-contain 98.6 2.4E-07 8.3E-12 66.4 8.5 65 79-145 50-118 (126)
42 1sfn_A Conserved hypothetical 98.6 2.6E-07 9E-12 74.0 9.4 64 80-146 53-117 (246)
43 1juh_A Quercetin 2,3-dioxygena 98.6 1.4E-07 4.9E-12 79.5 8.1 58 89-147 265-323 (350)
44 1y9q_A Transcriptional regulat 98.6 3.4E-07 1.2E-11 69.6 9.3 59 80-140 107-169 (192)
45 1rc6_A Hypothetical protein YL 98.6 3.8E-07 1.3E-11 73.3 9.9 60 79-140 181-243 (261)
46 4b29_A Dimethylsulfoniopropion 98.5 3.7E-07 1.3E-11 73.9 9.1 71 76-147 131-204 (217)
47 1dgw_A Canavalin; duplicated s 98.5 7.3E-07 2.5E-11 68.4 10.2 70 77-146 41-117 (178)
48 1y3t_A Hypothetical protein YX 98.5 6.5E-07 2.2E-11 72.9 10.3 62 77-140 46-110 (337)
49 1fi2_A Oxalate oxidase, germin 98.5 1.8E-06 6E-11 67.2 12.1 76 71-147 67-153 (201)
50 2vqa_A SLL1358 protein, MNCA; 98.5 9.9E-07 3.4E-11 73.1 11.3 70 78-147 53-130 (361)
51 2f4p_A Hypothetical protein TM 98.5 8.9E-07 3E-11 65.6 9.7 60 79-140 50-112 (147)
52 1x82_A Glucose-6-phosphate iso 98.5 8.4E-07 2.9E-11 68.8 9.8 68 76-144 66-150 (190)
53 1rc6_A Hypothetical protein YL 98.5 3.9E-07 1.3E-11 73.1 8.1 65 80-146 62-132 (261)
54 4e2q_A Ureidoglycine aminohydr 98.5 3.8E-07 1.3E-11 75.5 8.1 66 79-146 72-140 (266)
55 2arc_A ARAC, arabinose operon 98.5 1.1E-06 3.7E-11 63.6 9.5 59 79-139 15-80 (164)
56 1sq4_A GLXB, glyoxylate-induce 98.5 4.1E-07 1.4E-11 74.5 8.1 66 79-146 70-141 (278)
57 2cav_A Protein (canavalin); vi 98.5 1.6E-06 5.3E-11 76.1 12.0 79 70-148 79-164 (445)
58 3h7j_A Bacilysin biosynthesis 98.5 4.2E-07 1.4E-11 72.4 7.6 62 84-147 152-218 (243)
59 1sef_A Conserved hypothetical 98.5 9.4E-07 3.2E-11 71.6 9.7 61 78-140 183-246 (274)
60 1y3t_A Hypothetical protein YX 98.4 8.4E-07 2.9E-11 72.2 9.3 55 91-147 235-290 (337)
61 1yfu_A 3-hydroxyanthranilate-3 98.4 3.7E-07 1.3E-11 71.8 6.7 57 82-138 40-100 (174)
62 1sef_A Conserved hypothetical 98.4 6.7E-07 2.3E-11 72.5 7.8 65 80-146 65-135 (274)
63 3h7j_A Bacilysin biosynthesis 98.4 1.3E-06 4.5E-11 69.5 9.2 61 78-140 35-98 (243)
64 1zvf_A 3-hydroxyanthranilate 3 98.4 5.1E-07 1.8E-11 71.1 6.2 55 81-135 38-100 (176)
65 1juh_A Quercetin 2,3-dioxygena 98.4 8.6E-07 2.9E-11 74.7 7.8 51 90-140 66-119 (350)
66 2ea7_A 7S globulin-1; beta bar 98.4 2.6E-06 9E-11 74.4 11.0 78 70-147 54-138 (434)
67 1uij_A Beta subunit of beta co 98.3 2.6E-06 8.7E-11 74.0 9.9 78 70-147 42-126 (416)
68 2xlg_A SLL1785 protein, CUCA; 98.3 4.8E-07 1.6E-11 73.4 4.4 58 82-140 48-127 (239)
69 2oyz_A UPF0345 protein VPA0057 98.3 2.4E-06 8.2E-11 61.2 7.3 58 84-141 30-87 (94)
70 1sfn_A Conserved hypothetical 98.3 2.4E-06 8.4E-11 68.4 8.0 66 79-146 167-235 (246)
71 1vr3_A Acireductone dioxygenas 98.3 3.5E-06 1.2E-10 66.8 8.6 52 89-140 97-152 (191)
72 2vqa_A SLL1358 protein, MNCA; 98.2 6.7E-06 2.3E-10 68.1 10.5 69 78-146 235-311 (361)
73 1j58_A YVRK protein; cupin, de 98.2 8.4E-06 2.9E-10 68.3 10.7 64 77-140 79-147 (385)
74 3d0j_A Uncharacterized protein 98.2 2.6E-06 8.8E-11 64.9 6.7 53 90-142 45-103 (140)
75 1j58_A YVRK protein; cupin, de 98.2 6.4E-06 2.2E-10 69.0 9.8 69 78-146 258-334 (385)
76 2ozi_A Hypothetical protein RP 98.1 1.9E-06 6.6E-11 60.7 3.8 61 80-140 20-84 (98)
77 3lag_A Uncharacterized protein 98.1 1.3E-06 4.4E-11 61.2 1.9 60 81-140 21-84 (98)
78 1sq4_A GLXB, glyoxylate-induce 98.0 1.4E-05 4.9E-10 65.3 7.7 68 79-148 193-265 (278)
79 2d40_A Z3393, putative gentisa 98.0 9.1E-06 3.1E-10 68.8 6.6 60 78-139 101-163 (354)
80 1zrr_A E-2/E-2' protein; nicke 98.0 2E-06 7E-11 67.2 2.4 52 89-140 93-147 (179)
81 1fxz_A Glycinin G1; proglycini 98.0 4E-05 1.4E-09 67.8 10.1 60 79-138 340-406 (476)
82 2qnk_A 3-hydroxyanthranilate 3 97.9 6.8E-06 2.3E-10 68.9 4.7 49 87-135 42-93 (286)
83 3fz3_A Prunin; TREE NUT allerg 97.9 3.6E-05 1.2E-09 69.2 9.7 62 72-134 390-458 (531)
84 2d5f_A Glycinin A3B4 subunit; 97.9 3.2E-05 1.1E-09 68.7 9.3 60 79-138 369-435 (493)
85 2d40_A Z3393, putative gentisa 97.9 2.9E-05 1E-09 65.6 8.5 58 81-141 272-332 (354)
86 3c3v_A Arachin ARAH3 isoform; 97.9 5.7E-05 1.9E-09 67.6 10.2 60 79-138 374-440 (510)
87 2phl_A Phaseolin; plant SEED s 97.9 6.2E-05 2.1E-09 65.2 9.6 78 70-147 45-135 (397)
88 4e2q_A Ureidoglycine aminohydr 97.8 6.7E-05 2.3E-09 62.0 8.8 65 80-146 189-256 (266)
89 3nw4_A Gentisate 1,2-dioxygena 97.8 5.7E-05 2E-09 65.1 7.8 79 60-140 85-167 (368)
90 3bu7_A Gentisate 1,2-dioxygena 97.8 6.9E-05 2.3E-09 65.0 8.2 61 78-139 124-187 (394)
91 3s7i_A Allergen ARA H 1, clone 97.8 0.00012 4E-09 63.9 9.5 62 78-139 45-110 (418)
92 3bu7_A Gentisate 1,2-dioxygena 97.7 0.00014 4.8E-09 63.0 9.7 59 79-139 296-356 (394)
93 2e9q_A 11S globulin subunit be 97.7 8.7E-05 3E-09 65.4 8.1 58 80-137 325-389 (459)
94 2phl_A Phaseolin; plant SEED s 97.7 0.00011 3.6E-09 63.8 8.4 65 79-143 241-318 (397)
95 3eo6_A Protein of unknown func 97.7 0.0001 3.4E-09 53.8 6.4 57 85-141 44-100 (106)
96 2d5f_A Glycinin A3B4 subunit; 97.7 0.00071 2.4E-08 60.1 13.1 79 69-148 38-148 (493)
97 2e9q_A 11S globulin subunit be 97.6 0.00039 1.3E-08 61.2 11.2 79 69-148 56-162 (459)
98 1uij_A Beta subunit of beta co 97.6 0.00015 5.1E-09 62.9 8.2 73 71-144 244-336 (416)
99 1fxz_A Glycinin G1; proglycini 97.6 0.00072 2.5E-08 59.8 12.3 80 68-148 40-148 (476)
100 2o1q_A Putative acetyl/propion 97.6 8.2E-05 2.8E-09 55.3 5.1 59 80-140 47-110 (145)
101 3qac_A 11S globulin SEED stora 97.6 0.00022 7.7E-09 63.1 8.7 63 71-134 318-387 (465)
102 3nw4_A Gentisate 1,2-dioxygena 97.5 0.00053 1.8E-08 59.1 9.9 62 79-142 281-344 (368)
103 3ksc_A LEGA class, prolegumin; 97.5 0.00018 6.1E-09 64.2 7.1 55 80-134 361-422 (496)
104 3qac_A 11S globulin SEED stora 97.5 0.00057 1.9E-08 60.5 10.2 87 59-148 34-165 (465)
105 3kgl_A Cruciferin; 11S SEED gl 97.5 0.00057 2E-08 60.5 10.0 64 72-136 319-389 (466)
106 2ea7_A 7S globulin-1; beta bar 97.5 0.00028 9.7E-09 61.5 7.8 72 71-143 261-351 (434)
107 3hqx_A UPF0345 protein aciad03 97.5 0.00053 1.8E-08 50.3 7.9 58 85-142 45-104 (111)
108 3ksc_A LEGA class, prolegumin; 97.3 0.0022 7.6E-08 57.2 12.1 81 67-148 37-145 (496)
109 3c3v_A Arachin ARAH3 isoform; 97.3 0.0036 1.2E-07 55.9 12.8 82 66-148 38-161 (510)
110 2q1z_B Anti-sigma factor CHRR, 97.2 0.00089 3.1E-08 52.1 6.9 55 77-137 125-181 (195)
111 3cjx_A Protein of unknown func 97.1 0.00072 2.4E-08 51.9 5.6 63 81-146 47-115 (165)
112 2cav_A Protein (canavalin); vi 97.1 0.0012 3.9E-08 57.9 7.6 69 71-140 276-361 (445)
113 2qnk_A 3-hydroxyanthranilate 3 97.0 0.0017 5.9E-08 54.4 7.4 61 84-146 214-275 (286)
114 2y0o_A Probable D-lyxose ketol 97.0 0.0017 5.7E-08 50.8 6.7 56 82-137 58-141 (175)
115 3s7i_A Allergen ARA H 1, clone 97.0 0.002 6.8E-08 56.1 7.7 71 71-142 258-359 (418)
116 3kgl_A Cruciferin; 11S SEED gl 96.9 0.0079 2.7E-07 53.2 11.3 87 60-148 28-180 (466)
117 3ebr_A Uncharacterized RMLC-li 96.9 0.0014 4.7E-08 49.9 5.6 56 79-138 44-101 (159)
118 3gbg_A TCP pilus virulence reg 96.9 0.0015 5E-08 51.4 5.6 57 88-145 21-83 (276)
119 1eyb_A Homogentisate 1,2-dioxy 96.8 0.0027 9.1E-08 56.4 7.0 66 79-147 159-227 (471)
120 3st7_A Capsular polysaccharide 96.6 0.0051 1.7E-07 50.1 7.1 64 81-145 276-351 (369)
121 3o14_A Anti-ecfsigma factor, C 96.4 0.013 4.6E-07 46.7 8.2 56 79-140 45-102 (223)
122 3bal_A Acetylacetone-cleaving 95.7 0.01 3.6E-07 45.3 4.4 61 80-140 49-112 (153)
123 2wfp_A Mannose-6-phosphate iso 95.4 0.071 2.4E-06 45.8 8.9 57 80-138 327-384 (394)
124 2qjv_A Uncharacterized IOLB-li 94.9 0.2 7E-06 41.4 10.0 66 79-147 31-108 (270)
125 2pa7_A DTDP-6-deoxy-3,4-keto-h 94.5 0.12 4E-06 38.7 6.9 56 85-140 43-104 (141)
126 1qwr_A Mannose-6-phosphate iso 94.3 0.14 4.9E-06 42.5 7.8 36 94-131 268-303 (319)
127 1zx5_A Mannosephosphate isomer 94.2 0.15 5.2E-06 42.1 7.6 40 94-136 246-287 (300)
128 4gjz_A Lysine-specific demethy 93.5 0.4 1.4E-05 36.1 8.4 61 80-140 127-226 (235)
129 3fz3_A Prunin; TREE NUT allerg 92.9 1.1 3.7E-05 40.3 11.4 43 66-109 38-82 (531)
130 1pmi_A PMI, phosphomannose iso 92.7 0.54 1.9E-05 41.0 9.0 46 93-138 377-423 (440)
131 3bb6_A Uncharacterized protein 92.6 1.5 5.2E-05 32.5 10.1 66 78-143 13-94 (127)
132 3eqe_A Putative cystein deoxyg 92.5 0.71 2.4E-05 35.3 8.5 58 83-140 75-142 (171)
133 3ejk_A DTDP sugar isomerase; Y 92.4 0.84 2.9E-05 35.1 8.8 62 85-146 61-139 (174)
134 1ywk_A 4-deoxy-L-threo-5-hexos 91.8 0.31 1.1E-05 40.8 6.1 44 93-138 76-121 (289)
135 3o14_A Anti-ecfsigma factor, C 91.6 0.75 2.6E-05 36.4 8.0 48 83-137 152-201 (223)
136 2vec_A YHAK, pirin-like protei 91.0 0.7 2.4E-05 37.5 7.3 45 97-142 204-248 (256)
137 2vec_A YHAK, pirin-like protei 90.4 0.48 1.6E-05 38.5 5.8 43 88-131 76-120 (256)
138 2gm6_A Cysteine dioxygenase ty 90.3 0.74 2.5E-05 36.1 6.6 54 85-138 87-153 (208)
139 1xru_A 4-deoxy-L-threo-5-hexos 90.2 0.53 1.8E-05 39.2 6.0 52 93-146 76-131 (282)
140 3bpz_A Potassium/sodium hyperp 89.6 0.36 1.2E-05 35.7 4.2 44 82-126 98-143 (202)
141 3ocp_A PRKG1 protein; serine/t 89.1 0.66 2.3E-05 31.8 5.0 44 82-126 49-94 (139)
142 2xdv_A MYC-induced nuclear ant 88.9 1.2 4E-05 38.8 7.5 60 80-139 142-223 (442)
143 3pna_A CAMP-dependent protein 88.0 0.81 2.8E-05 32.0 4.9 45 81-126 63-109 (154)
144 1tq5_A Protein YHHW; bicupin, 87.8 0.99 3.4E-05 36.2 5.9 43 88-131 53-97 (242)
145 4f8a_A Potassium voltage-gated 87.3 1.1 3.7E-05 31.1 5.2 44 83-127 54-99 (160)
146 2d93_A RAP guanine nucleotide 86.7 0.37 1.2E-05 33.0 2.4 44 82-126 42-88 (134)
147 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 86.0 3.3 0.00011 32.0 7.8 61 86-146 57-134 (185)
148 1vrb_A Putative asparaginyl hy 85.5 4.8 0.00017 33.4 9.1 58 81-138 145-241 (342)
149 1tq5_A Protein YHHW; bicupin, 85.3 2 6.9E-05 34.3 6.5 42 95-142 181-222 (242)
150 2ptm_A Hyperpolarization-activ 84.7 1.3 4.5E-05 32.4 4.7 44 83-126 98-143 (198)
151 3of1_A CAMP-dependent protein 84.3 0.94 3.2E-05 33.6 3.8 43 83-126 34-78 (246)
152 1dgw_X Canavalin; duplicated s 84.0 0.74 2.5E-05 31.0 2.8 40 70-110 30-72 (79)
153 1yud_A Hypothetical protein SO 83.4 1.5 5.1E-05 33.9 4.7 56 82-138 54-122 (170)
154 2ixk_A DTDP-4-dehydrorhamnose 83.3 5.1 0.00017 30.9 7.7 61 86-146 58-135 (184)
155 3dl3_A Tellurite resistance pr 83.3 7.1 0.00024 28.5 8.1 65 79-143 16-92 (119)
156 4diq_A Lysine-specific demethy 83.2 6.2 0.00021 35.0 9.2 59 81-139 168-252 (489)
157 3ukn_A Novel protein similar t 82.6 1.5 5.1E-05 32.4 4.3 44 83-127 102-147 (212)
158 1qwr_A Mannose-6-phosphate iso 81.6 1.4 4.7E-05 36.5 4.2 43 93-135 115-178 (319)
159 2yu1_A JMJC domain-containing 81.6 4 0.00014 35.7 7.3 59 81-140 200-291 (451)
160 2qcs_B CAMP-dependent protein 81.2 2 6.9E-05 33.0 4.7 43 83-126 66-110 (291)
161 3eln_A Cysteine dioxygenase ty 80.7 7.9 0.00027 30.0 8.0 54 85-138 78-145 (200)
162 3shr_A CGMP-dependent protein 80.3 2 6.9E-05 33.3 4.5 41 85-126 68-110 (299)
163 2qdr_A Uncharacterized protein 80.1 3.4 0.00012 34.6 5.9 46 93-145 110-158 (303)
164 2p17_A Pirin-like protein; GK1 80.1 4.1 0.00014 33.1 6.5 45 94-142 187-236 (277)
165 3kmh_A D-lyxose isomerase; cup 79.9 5.9 0.0002 32.4 7.2 26 115-140 172-197 (246)
166 3al5_A HTYW5, JMJC domain-cont 79.7 2 6.7E-05 35.6 4.5 61 80-140 170-265 (338)
167 3kv4_A PHD finger protein 8; e 78.9 9.3 0.00032 33.4 8.7 59 81-140 235-326 (447)
168 1wlt_A 176AA long hypothetical 78.8 8.3 0.00029 30.1 7.6 55 86-140 74-145 (196)
169 3d8c_A Hypoxia-inducible facto 78.6 3.7 0.00012 34.2 5.8 59 81-139 187-285 (349)
170 1yll_A PA5104, conserved hypot 78.6 2.8 9.5E-05 32.9 4.8 36 95-131 140-175 (200)
171 3k3o_A PHF8, PHD finger protei 78.1 9 0.00031 32.8 8.2 59 81-140 151-242 (371)
172 3of1_A CAMP-dependent protein 77.5 4.2 0.00014 30.0 5.3 42 85-126 154-197 (246)
173 3mdp_A Cyclic nucleotide-bindi 77.0 2.9 9.8E-05 28.1 4.0 46 82-127 32-86 (142)
174 1dzr_A DTDP-4-dehydrorhamnose 76.8 11 0.00038 28.9 7.7 47 94-140 70-127 (183)
175 3esg_A HUTD, putative uncharac 76.4 11 0.00036 29.6 7.6 58 86-144 57-116 (193)
176 3ryk_A DTDP-4-dehydrorhamnose 76.3 11 0.00039 29.6 7.8 63 85-147 78-158 (205)
177 1oi6_A PCZA361.16; epimerase, 74.7 9.8 0.00034 29.8 7.0 52 95-146 71-134 (205)
178 2c0z_A NOVW; isomerase, epimer 72.2 11 0.00037 29.9 6.7 46 95-140 79-135 (216)
179 1upi_A DTDP-4-dehydrorhamnose 70.7 23 0.00078 28.2 8.4 61 86-146 75-153 (225)
180 3k2o_A Bifunctional arginine d 70.7 4.6 0.00016 33.7 4.5 25 116-140 257-281 (336)
181 3uss_A Putative uncharacterize 70.6 13 0.00044 29.2 6.8 54 85-138 81-147 (211)
182 1o7f_A CAMP-dependent RAP1 gua 70.5 7.1 0.00024 32.3 5.6 44 83-126 365-410 (469)
183 1vp6_A CNBD, cyclic-nucleotide 69.8 3.7 0.00013 27.5 3.1 42 82-126 37-80 (138)
184 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 69.2 9.2 0.00031 29.9 5.6 62 85-146 68-141 (197)
185 3idb_B CAMP-dependent protein 69.2 7.2 0.00025 27.1 4.7 45 82-126 64-113 (161)
186 1dgw_Y Canavalin; duplicated s 67.0 3.5 0.00012 28.7 2.5 25 116-140 7-31 (93)
187 2pqq_A Putative transcriptiona 66.4 9 0.00031 25.7 4.6 45 82-126 31-81 (149)
188 4f7z_A RAP guanine nucleotide 65.8 8 0.00027 35.9 5.4 42 85-126 367-410 (999)
189 3dn7_A Cyclic nucleotide bindi 65.8 12 0.00041 26.6 5.3 45 82-126 33-83 (194)
190 1j1l_A Pirin; beta sandwich, c 65.3 14 0.00048 30.2 6.3 75 57-132 19-98 (290)
191 2p17_A Pirin-like protein; GK1 64.9 10 0.00036 30.7 5.4 78 53-132 15-96 (277)
192 2fmy_A COOA, carbon monoxide o 64.6 10 0.00034 27.7 4.8 48 83-130 31-83 (220)
193 3kv5_D JMJC domain-containing 64.3 5.3 0.00018 35.2 3.7 60 81-140 270-361 (488)
194 2oz6_A Virulence factor regula 64.0 9.7 0.00033 27.3 4.6 45 83-127 17-67 (207)
195 3b02_A Transcriptional regulat 63.8 8.9 0.0003 27.6 4.3 33 94-126 16-52 (195)
196 1wgp_A Probable cyclic nucleot 63.1 2 6.7E-05 29.0 0.6 43 83-126 33-83 (137)
197 1zx5_A Mannosephosphate isomer 62.3 5 0.00017 32.9 3.0 20 116-135 159-178 (300)
198 2z69_A DNR protein; beta barre 62.2 7.2 0.00025 26.4 3.4 45 82-126 38-88 (154)
199 3gyd_A CNMP-BD protein, cyclic 62.0 11 0.00039 27.2 4.7 63 63-126 47-115 (187)
200 3ryp_A Catabolite gene activat 61.4 11 0.00039 26.9 4.6 44 83-126 23-72 (210)
201 3d0s_A Transcriptional regulat 61.2 12 0.00042 27.3 4.8 44 83-126 33-82 (227)
202 3fx3_A Cyclic nucleotide-bindi 59.9 16 0.00053 26.9 5.2 45 82-126 37-87 (237)
203 3iwz_A CAP-like, catabolite ac 59.6 31 0.0011 25.0 6.8 66 60-126 16-87 (230)
204 3shr_A CGMP-dependent protein 57.6 17 0.00058 27.9 5.2 42 85-126 186-234 (299)
205 3pua_A GRC5, PHD finger protei 57.6 8.4 0.00029 33.3 3.7 59 81-140 178-269 (392)
206 1ft9_A Carbon monoxide oxidati 57.3 39 0.0013 24.5 7.0 57 82-140 26-87 (222)
207 4din_B CAMP-dependent protein 57.2 4.7 0.00016 33.1 2.0 43 83-126 157-201 (381)
208 1zyb_A Transcription regulator 57.2 13 0.00043 27.6 4.3 45 82-126 46-96 (232)
209 3kv9_A JMJC domain-containing 57.1 8.6 0.0003 33.2 3.7 26 115-140 245-270 (397)
210 1yll_A PA5104, conserved hypot 57.0 26 0.00087 27.3 6.1 57 86-144 52-111 (200)
211 4ev0_A Transcription regulator 55.9 18 0.00061 26.0 4.8 44 83-126 26-75 (216)
212 2gau_A Transcriptional regulat 55.6 17 0.0006 26.5 4.8 45 82-126 36-86 (232)
213 2wfp_A Mannose-6-phosphate iso 55.4 8.7 0.0003 32.7 3.4 20 116-135 241-260 (394)
214 3dv8_A Transcriptional regulat 54.8 18 0.00061 26.1 4.7 44 83-126 30-79 (220)
215 3kcc_A Catabolite gene activat 53.5 18 0.00061 27.5 4.6 45 82-126 72-122 (260)
216 2bgc_A PRFA; bacterial infecti 53.5 22 0.00076 26.3 5.1 44 85-128 24-72 (238)
217 2ypd_A Probable JMJC domain-co 50.7 22 0.00074 30.9 5.1 25 116-140 294-318 (392)
218 2zcw_A TTHA1359, transcription 50.1 18 0.00062 26.0 4.0 31 96-126 26-60 (202)
219 2qcs_B CAMP-dependent protein 49.5 25 0.00085 26.7 4.9 33 94-126 197-234 (291)
220 3pur_A Lysine-specific demethy 48.4 14 0.00048 33.2 3.7 24 116-139 367-390 (528)
221 1j1l_A Pirin; beta sandwich, c 47.5 27 0.00094 28.4 5.1 41 94-136 189-229 (290)
222 1pmi_A PMI, phosphomannose iso 45.7 15 0.00052 31.8 3.4 21 116-136 267-287 (440)
223 1o5l_A Transcriptional regulat 44.6 21 0.0007 26.1 3.6 44 83-126 26-75 (213)
224 4ava_A Lysine acetyltransferas 44.4 25 0.00084 27.5 4.3 43 83-125 40-87 (333)
225 2qjv_A Uncharacterized IOLB-li 43.4 68 0.0023 26.2 6.9 37 97-134 186-230 (270)
226 3la7_A Global nitrogen regulat 42.3 33 0.0011 25.5 4.5 45 82-126 46-96 (243)
227 3e97_A Transcriptional regulat 41.9 20 0.00068 26.2 3.2 44 83-126 33-82 (231)
228 3cf6_E RAP guanine nucleotide 41.2 36 0.0012 30.8 5.3 44 83-126 60-105 (694)
229 3e6c_C CPRK, cyclic nucleotide 41.0 33 0.0011 25.5 4.4 44 83-126 36-85 (250)
230 3tnp_B CAMP-dependent protein 39.5 40 0.0014 28.0 5.0 32 94-125 307-348 (416)
231 3tnp_B CAMP-dependent protein 38.7 35 0.0012 28.3 4.5 42 85-126 174-220 (416)
232 4hn1_A Putative 3-epimerase in 37.5 1.4E+02 0.0049 23.1 9.9 63 85-147 52-132 (201)
233 1pcq_O Groes protein; chaperon 36.5 5.6 0.00019 27.9 -0.6 18 116-133 56-73 (97)
234 1o7f_A CAMP-dependent RAP1 gua 36.1 44 0.0015 27.4 4.7 45 83-127 69-121 (469)
235 2jmz_A Hypothetical protein MJ 36.0 56 0.0019 24.3 4.9 41 94-139 100-141 (186)
236 3g7d_A PHPD; non heme Fe(II) d 33.8 76 0.0026 27.5 5.8 45 100-144 359-405 (443)
237 3dkw_A DNR protein; CRP-FNR, H 33.7 20 0.0007 25.9 2.1 46 81-126 34-85 (227)
238 4din_B CAMP-dependent protein 33.0 48 0.0016 27.0 4.4 32 94-125 288-324 (381)
239 4f7z_A RAP guanine nucleotide 29.2 77 0.0026 29.3 5.5 42 84-125 70-119 (999)
240 3dkq_A PKHD-type hydroxylase S 28.3 47 0.0016 26.4 3.5 31 104-134 147-177 (243)
241 3anw_A GINS51, putative unchar 27.1 18 0.00061 27.7 0.7 32 97-129 137-169 (188)
242 3tdq_A PILY2 protein; fimbiria 21.0 56 0.0019 22.9 2.3 30 45-74 54-83 (98)
243 2plt_A Plastocyanin; electron 20.6 1.1E+02 0.0039 19.4 3.7 14 125-138 20-33 (98)
244 3loi_A Putative uncharacterize 20.1 2.9E+02 0.0098 20.9 6.4 55 82-136 58-125 (172)
245 4db5_A Tumor necrosis factor l 20.1 48 0.0016 24.4 1.8 17 110-128 83-99 (125)
246 1zx8_A Hypothetical protein TM 20.0 17 0.00058 26.8 -0.6 39 92-134 50-88 (136)
No 1
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.91 E-value=2.2e-24 Score=176.87 Aligned_cols=112 Identities=21% Similarity=0.379 Sum_probs=99.5
Q ss_pred ceeeecCCCCCCCCcccCCCcccccccCCccccceeeeEEEeeCCChhhhhhcCCceeeeEecCCccc-cccCCCceEEE
Q 031987 22 PLIIPIPKSKPTTPRVSKSKPVMASTTTTTAATAEIFGVKIEKNPPQSKLSELGVTSWPKWGCPPSKF-PWTFTATETMY 100 (149)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~ps~~~L~~lGv~~~giWe~~pg~f-~~h~~~dE~~y 100 (149)
|-+++|+.+..+.|. ..|+++++.++++.+..+..+.- ..|..+||+|+|+||.+ .++|+++|+||
T Consensus 125 ~~~~~i~~~~~l~P~-~~p~p~~~l~G~P~~~~~~~~~~------------~~g~~~~GiW~~tpG~~~~~~~~~~E~~~ 191 (238)
T 3myx_A 125 SGITALDRLALLTPS-SPPDPSIMISPLPQCRSNNLFED------------TASTLRIGVWDSTPYERISRPHKIHELMN 191 (238)
T ss_dssp CSEEEECTTCCCEEE-CCCCGGGBSSCCCCEEEEEEEEC------------SSSSCEEEEEEECCEEBCCEECSSCEEEE
T ss_pred CccEEecCCCCCCCC-CCCChhheecCCchheeeEEEEC------------CCCCEEEeEEEeCCCEEECCcCCCCEEEE
Confidence 457899999999997 78999999999988777665431 25778899999999874 57889999999
Q ss_pred EEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEe
Q 031987 101 LLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSL 147 (149)
Q Consensus 101 VLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi 147 (149)
||||+++++.++| +.++++|||+++||+|+.++|++.+++||+|+|
T Consensus 192 ILeG~v~lt~~~G-~~~~~~aGD~~~~P~G~~~tWev~e~vrK~Yvi 237 (238)
T 3myx_A 192 LIEGRVVLSLENG-SSLTVNTGDTVFVAQGAPCKWTSTGYVRKFYAV 237 (238)
T ss_dssp EEECCEEEEETTS-CEEEECTTCEEEECTTCEEEEEESSCEEEEEEE
T ss_pred EEEeEEEEEeCCC-CEEEECCCCEEEECCCCEEEEEECccEEEEEEe
Confidence 9999999999988 889999999999999999999999999999997
No 2
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=6.6e-24 Score=157.59 Aligned_cols=76 Identities=18% Similarity=0.315 Sum_probs=70.7
Q ss_pred hhcCCceeeeEecCCccccccCCCc-eEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEec
Q 031987 72 SELGVTSWPKWGCPPSKFPWTFTAT-ETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSLE 148 (149)
Q Consensus 72 ~~lGv~~~giWe~~pg~f~~h~~~d-E~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi~ 148 (149)
...|...+|+|+|+||+|+|+++.+ |+||||||+++++.+|| +.++++|||+++||+|++|+|++.+++||+|++-
T Consensus 37 ~~~g~~~~GvWe~tPG~~~~~~~~~~E~~~iLeG~~~lt~ddG-~~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~~ 113 (116)
T 3es4_A 37 DVENGTIVAVWMAEPGIYNYAGRDLEETFVVVEGEALYSQADA-DPVKIGPGSIVSIAKGVPSRLEILSSFRKLATVI 113 (116)
T ss_dssp SSSSCCEEEEEEECSEEEEECCCSEEEEEEEEECCEEEEETTC-CCEEECTTEEEEECTTCCEEEEECSCEEEEEEEE
T ss_pred CCCCCEEEEEEecCCceeECeeCCCcEEEEEEEeEEEEEeCCC-eEEEECCCCEEEECCCCeEEEEEeEEEeEEEEEe
Confidence 4467778999999999999998866 99999999999999998 7899999999999999999999999999999873
No 3
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=99.87 E-value=3.2e-22 Score=148.25 Aligned_cols=111 Identities=20% Similarity=0.302 Sum_probs=90.3
Q ss_pred ceeeecCCCCCCCCcccCCCcccccccCCccccceeeeEEEeeCCChhhhhhcCCceeeeEecCCccccccCCC-ceEEE
Q 031987 22 PLIIPIPKSKPTTPRVSKSKPVMASTTTTTAATAEIFGVKIEKNPPQSKLSELGVTSWPKWGCPPSKFPWTFTA-TETMY 100 (149)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~ps~~~L~~lGv~~~giWe~~pg~f~~h~~~-dE~~y 100 (149)
+.+++|+.++.+.|+... +++..++++....+..+ ..+.|...+|+|+++||.+.+|+++ +|++|
T Consensus 8 ~~~~~~~~~~~~~p~~~~--~~~~i~G~P~~~~~~~~------------~~~~g~~~~g~w~~~pG~~~~~~~~~~E~~~ 73 (123)
T 3bcw_A 8 SRLVRIDTGPMINPVAGK--PSRPIAGDASFRTVTAF------------EGGQGKVESGVWESTSGSFQSNTTGYIEYCH 73 (123)
T ss_dssp TSCEECCCSSCSSCEEEC--CSSEEEECCCEEEEEEE------------EETTTTEEEEEEEEEEEEEECCCTTEEEEEE
T ss_pred hheEEccccCCCCCccCC--cccEEcCCCCeeEEEEE------------eCCCCCEEEEEEEECCCceeeEcCCCcEEEE
Confidence 446677776667777655 55666666555544321 1245677899999999999999888 99999
Q ss_pred EEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEe
Q 031987 101 LLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSL 147 (149)
Q Consensus 101 VLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi 147 (149)
||||+++++.+|+ +.++++|||+++||+|..|+|++.+++||+|++
T Consensus 74 Vl~G~~~l~~~~g-~~~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv~ 119 (123)
T 3bcw_A 74 IIEGEARLVDPDG-TVHAVKAGDAFIMPEGYTGRWEVDRHVKKIYFV 119 (123)
T ss_dssp EEEEEEEEECTTC-CEEEEETTCEEEECTTCCCEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEECCC-eEEEECCCCEEEECCCCeEEEEECCceeEEEEE
Confidence 9999999999776 689999999999999999999999999999987
No 4
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.78 E-value=1.5e-18 Score=124.29 Aligned_cols=86 Identities=44% Similarity=0.847 Sum_probs=80.1
Q ss_pred EEeeCCChhhhhhcCCceeeeEecCCccccccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 61 KIEKNPPQSKLSELGVTSWPKWGCPPSKFPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 61 ~i~~~ps~~~L~~lGv~~~giWe~~pg~f~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
+++++...++|.+.|...+|.|+++||.+++|.+.+|++|||+|+++++++++ +.+.++|||+++||+|..++|++.++
T Consensus 15 ~~~~~~~~~~l~~~g~~~~~~~~~~pg~~~~hH~~~E~~~Vl~G~~~~~i~~g-~~~~l~~GD~i~ip~g~~H~~~n~~~ 93 (101)
T 1o5u_A 15 VKIEKPTPEKLKELSVEKWPIWEKEVSEFDWYYDTNETCYILEGKVEVTTEDG-KKYVIEKGDLVTFPKGLRCRWKVLEP 93 (101)
T ss_dssp CEEECCCHHHHHHHTGGGSCEEEECSEEEEEECSSCEEEEEEEEEEEEEETTC-CEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEecCCCccEEeeCCceEEEEEEeCCCcccccCCceEEEEEEeCEEEEEECCC-CEEEECCCCEEEECCCCcEEEEeCCC
Confidence 35778889999999999999999999999998889999999999999999844 58999999999999999999999999
Q ss_pred eEEEEEe
Q 031987 141 VNKHYSL 147 (149)
Q Consensus 141 vrK~Yvi 147 (149)
++|+|++
T Consensus 94 ~~~~yv~ 100 (101)
T 1o5u_A 94 VRKHYNL 100 (101)
T ss_dssp EEEEEEE
T ss_pred eeEEEEE
Confidence 9999986
No 5
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.65 E-value=6.8e-16 Score=115.12 Aligned_cols=71 Identities=25% Similarity=0.370 Sum_probs=66.1
Q ss_pred CceeeeEecCCccccccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEec
Q 031987 76 VTSWPKWGCPPSKFPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSLE 148 (149)
Q Consensus 76 v~~~giWe~~pg~f~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi~ 148 (149)
....++|+++||.++||++.+|++|||||+++++++|. .++++|||+++||+|..|+|++.+++|++|++-
T Consensus 56 ~~~~~~~~~~pG~~~~h~~~~E~~~VLeG~~~l~~~g~--~~~l~~GD~i~~p~g~~h~~~~~~~~~~l~v~~ 126 (133)
T 2pyt_A 56 SMAAGFMQWDNAFFPWTLNYDEIDMVLEGELHVRHEGE--TMIAKAGDVMFIPKGSSIEFGTPTSVRFLYVAW 126 (133)
T ss_dssp SSEEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEETTE--EEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred cEEEEEEEECCCCccccCCCCEEEEEEECEEEEEECCE--EEEECCCcEEEECCCCEEEEEeCCCEEEEEEEc
Confidence 45688999999988899999999999999999999966 899999999999999999999999999999874
No 6
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.59 E-value=3.9e-15 Score=114.48 Aligned_cols=71 Identities=25% Similarity=0.474 Sum_probs=66.0
Q ss_pred CceeeeEecCCccccccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEec
Q 031987 76 VTSWPKWGCPPSKFPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSLE 148 (149)
Q Consensus 76 v~~~giWe~~pg~f~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi~ 148 (149)
..++|+|+++.+.++||++++|++|||||+++++++|. .+.++|||+++||+|..++|++.++.++.|++-
T Consensus 65 ~~s~g~~~~e~~~~~~~~~~eE~~yVLeG~~~l~i~g~--~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V~~ 135 (151)
T 4axo_A 65 RLGCGMMEMKETTFDWTLNYDEIDYVIDGTLDIIIDGR--KVSASSGELIFIPKGSKIQFSVPDYARFIYVTY 135 (151)
T ss_dssp SCEEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEETTE--EEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred cEEEEEEEEcCccccEeCCCcEEEEEEEeEEEEEECCE--EEEEcCCCEEEECCCCEEEEEeCCCEEEEEEEC
Confidence 67799999997788999999999999999999999665 899999999999999999999999999999874
No 7
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.53 E-value=3.7e-14 Score=116.16 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=61.7
Q ss_pred CCceeeeEecCCcccc-ccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEe
Q 031987 75 GVTSWPKWGCPPSKFP-WTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSL 147 (149)
Q Consensus 75 Gv~~~giWe~~pg~f~-~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi 147 (149)
+..+.|+|.+ .+++. +.+++||++|||||++++++ +| ++++++|||+++||+|+.++|++.+++||+|+.
T Consensus 45 ~~~~~G~~~~-~g~~~v~~~p~dE~~~VleG~~~lt~-~g-~~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~ 115 (238)
T 3myx_A 45 QGIAAGIVEF-GTALSVEAYPYTEMLVMHRGSVTLTS-GT-DSVTLSTGESAVIGRGTQVRIDAQPESLWAFCA 115 (238)
T ss_dssp TSEEEEEEEE-CSEEEESSCSSEEEEEEEESEEEEEE-TT-EEEEEETTCEEEECTTCCEEEEECTTEEEEEEE
T ss_pred CCeEEEEEEe-ccccccccCCCcEEEEEEEeEEEEEC-CC-eEEEEcCCCEEEECCCCEEEEEecCCeEEEEEe
Confidence 3445788888 77765 47889999999999999999 45 699999999999999999999999999999985
No 8
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.49 E-value=5e-13 Score=97.57 Aligned_cols=73 Identities=26% Similarity=0.399 Sum_probs=64.5
Q ss_pred CCceeeeEecCCcc-ccccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc-CceEEEEEecC
Q 031987 75 GVTSWPKWGCPPSK-FPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI-EAVNKHYSLEK 149 (149)
Q Consensus 75 Gv~~~giWe~~pg~-f~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~-e~vrK~Yvi~~ 149 (149)
+..+.+.|+.+||. ++||.+.+|++|||||+++++.+|. .+++++||+++||+|..|+|+.. ++.|++|++-|
T Consensus 38 ~~~~~~~~~~~pG~~~~~H~~~~E~~~Vl~G~~~~~~~g~--~~~l~~GD~v~ip~g~~H~~~~~~~~~~~l~v~~P 112 (119)
T 3lwc_A 38 GPITIGYGRYAPGQSLTETMAVDDVMIVLEGRLSVSTDGE--TVTAGPGEIVYMPKGETVTIRSHEEGALTAYVTYP 112 (119)
T ss_dssp CCCEEEEEEECTTCEEEEECSSEEEEEEEEEEEEEEETTE--EEEECTTCEEEECTTCEEEEEEEEEEEEEEEEEEC
T ss_pred CCEEEEEEEECCCCCcCccCCCCEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCEEEEEcCCCCeEEEEEECC
Confidence 34557899999996 5788899999999999999999765 89999999999999999999998 78999998743
No 9
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.91 E-value=1.7e-09 Score=75.18 Aligned_cols=57 Identities=19% Similarity=0.367 Sum_probs=46.8
Q ss_pred CccccccCC-C-ceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEE
Q 031987 86 PSKFPWTFT-A-TETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNK 143 (149)
Q Consensus 86 pg~f~~h~~-~-dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK 143 (149)
||.+.+|++ . +|++||++|++++..+|+ +.+.+++||++++|+|..|.|...+..+-
T Consensus 37 ~g~~~~H~H~~~~E~~~Vl~G~~~~~~~~~-~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 95 (107)
T 2i45_A 37 LGDYGWHTHGYSDKVLFAVEGDMAVDFADG-GSMTIREGEMAVVPKSVSHRPRSENGCSL 95 (107)
T ss_dssp EEECCCBCC--CCEEEEESSSCEEEEETTS-CEEEECTTEEEEECTTCCEEEEEEEEEEE
T ss_pred CCCCcceeCCCCCEEEEEEeCEEEEEECCC-cEEEECCCCEEEECCCCcEeeEeCCCeEE
Confidence 344555544 3 899999999999999993 38999999999999999999999766543
No 10
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.90 E-value=8.9e-09 Score=73.38 Aligned_cols=66 Identities=23% Similarity=0.224 Sum_probs=53.8
Q ss_pred eeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 79 WPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
.-.+...||.. ++|. +.+|++||++|+++++.+|+ .+.+++||+++||+|..|.+...++.+-...
T Consensus 38 v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 38 VMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp EEEEEECTTCEEEEECCSSCEEEEEEESCEEEEETTE--EEEECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred EEEEEECCCCccCceeCCCcEEEEEEECEEEEEECCE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 44456666654 4554 46899999999999999888 8999999999999999999999987655443
No 11
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.90 E-value=1.5e-08 Score=70.59 Aligned_cols=67 Identities=16% Similarity=0.026 Sum_probs=55.2
Q ss_pred eeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEe
Q 031987 79 WPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSL 147 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi 147 (149)
...+...||.. ++|. +.+|++||++|++++..+|+ .+.+++||++++|+|..|.+...++.+-..++
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~v~ 104 (116)
T 2pfw_A 36 AVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDGV--IKVLTAGDSFFVPPHVDHGAVCPTGGILIDTF 104 (116)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEEECEEEEETTE--EEEECTTCEEEECTTCCEEEEESSCEEEEEEE
T ss_pred EEEEEECCCCcCCcEECCcceEEEEEeeEEEEEECCE--EEEeCCCCEEEECcCCceeeEeCCCcEEEEEE
Confidence 45566677753 4554 48999999999999999877 89999999999999999999999877655554
No 12
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.89 E-value=9.9e-09 Score=69.00 Aligned_cols=67 Identities=16% Similarity=0.158 Sum_probs=53.1
Q ss_pred eeeEecCCccc-cccCC--CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEEEe
Q 031987 79 WPKWGCPPSKF-PWTFT--ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE--AVNKHYSL 147 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~~--~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Yvi 147 (149)
...+...||.. ++|++ .+|++||++|++++..+|+ .+.+++||++++|+|..|.|.... +.+-.+++
T Consensus 30 ~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~ 101 (105)
T 1v70_A 30 YDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEE--EALLAPGMAAFAPAGAPHGVRNESASPALLLVVT 101 (105)
T ss_dssp EEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred EEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEe
Confidence 45566667653 55653 4789999999999999887 899999999999999999999864 45555543
No 13
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.88 E-value=1.2e-08 Score=72.39 Aligned_cols=62 Identities=11% Similarity=0.072 Sum_probs=49.4
Q ss_pred eeeeEecCCccc-cccCC--CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 78 SWPKWGCPPSKF-PWTFT--ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 78 ~~giWe~~pg~f-~~h~~--~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
....+...||.. ++|++ .+|++||++|++++.++|+ +.+.+++||++++|+|..|.|.....
T Consensus 40 ~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~-~~~~l~~Gd~~~i~~~~~H~~~n~~~ 104 (125)
T 3h8u_A 40 VVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNG-IVTHLKAGDIAIAKPGQVHGAMNSGP 104 (125)
T ss_dssp EEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTT-CEEEEETTEEEEECTTCCCEEEECSS
T ss_pred EEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCC-eEEEeCCCCEEEECCCCEEEeEeCCC
Confidence 344577777764 45543 5899999999999999444 48999999999999999999998643
No 14
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.87 E-value=9.9e-09 Score=76.41 Aligned_cols=66 Identities=21% Similarity=0.259 Sum_probs=53.3
Q ss_pred eeeEecCCcc--cccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCC-cEEEEEEc--CceEEEEE
Q 031987 79 WPKWGCPPSK--FPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKG-MKITWDVI--EAVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~--f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG-~~~tW~v~--e~vrK~Yv 146 (149)
...+...||. .++| ...+|++|||+|++++..+|+ .+.+++||+++||+| ..|.|... ++++-.++
T Consensus 48 ~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v 120 (162)
T 3l2h_A 48 IHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEND--QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVI 120 (162)
T ss_dssp EEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTE--EEEECTTCEEEECTTSCCEEEECCSSSCEEEEEE
T ss_pred EEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEE
Confidence 4457777876 3445 457999999999999999988 899999999999998 99999984 45554444
No 15
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.86 E-value=1.8e-08 Score=71.28 Aligned_cols=67 Identities=13% Similarity=0.084 Sum_probs=54.7
Q ss_pred eeeEecCCccc-cccCC-CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc-eEEEEEe
Q 031987 79 WPKWGCPPSKF-PWTFT-ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA-VNKHYSL 147 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~~-~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~-vrK~Yvi 147 (149)
...+...||.. ++|.+ .+|++||++|++++..+|+ .+.+++||++++|+|..|.++..+. .+-+.++
T Consensus 43 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~l~v~ 112 (126)
T 4e2g_A 43 LNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTIGEE--TRVLRPGMAYTIPGGVRHRARTFEDGCLVLDIF 112 (126)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEECEEEEETTE--EEEECTTEEEEECTTCCEEEECCTTCEEEEEEE
T ss_pred EEEEEECCCCcCCCccCCCceEEEEEEeEEEEEECCE--EEEeCCCCEEEECCCCcEEeEECCCCEEEEEEE
Confidence 45567777763 55643 6999999999999999887 8999999999999999999999877 5544444
No 16
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.84 E-value=3.1e-08 Score=67.91 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=53.5
Q ss_pred ceeeeEecCCccc-ccc--CC--CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEEE
Q 031987 77 TSWPKWGCPPSKF-PWT--FT--ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE--AVNKHYS 146 (149)
Q Consensus 77 ~~~giWe~~pg~f-~~h--~~--~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Yv 146 (149)
.....+...||.. ++| ++ .+|++||++|++++..+++ .+.+++||++++|+|..|.|.... +.+-.++
T Consensus 21 ~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v 95 (113)
T 2gu9_A 21 VQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGH--TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNF 95 (113)
T ss_dssp EEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTE--EEEECTTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred EEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 3455667777753 344 43 6899999999999999887 899999999999999999999864 4544444
No 17
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.84 E-value=3.5e-08 Score=68.64 Aligned_cols=66 Identities=14% Similarity=0.267 Sum_probs=54.1
Q ss_pred eeeEecCCcc-ccccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 79 WPKWGCPPSK-FPWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~-f~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
...+...||. +++|. +.+|++||++|++++..+|+ .+.+++||++++|+|..|.|+..++.+-.++
T Consensus 42 ~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~v 109 (115)
T 1yhf_A 42 ITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQE--TYRVAEGQTIVMPAGIPHALYAVEAFQMLLV 109 (115)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEESEEEEEETTE--EEEEETTCEEEECTTSCEEEEESSCEEEEEE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCCEEEEECCCceEEEE
Confidence 3445666665 35564 47999999999999999887 8999999999999999999999887665544
No 18
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.80 E-value=2.4e-08 Score=75.55 Aligned_cols=68 Identities=15% Similarity=0.111 Sum_probs=54.4
Q ss_pred eeeeEecCCccc--cccC--CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCC--cEEEEEEc--CceEEEEEe
Q 031987 78 SWPKWGCPPSKF--PWTF--TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKG--MKITWDVI--EAVNKHYSL 147 (149)
Q Consensus 78 ~~giWe~~pg~f--~~h~--~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG--~~~tW~v~--e~vrK~Yvi 147 (149)
....++..||.. .+|+ ..+|++|||+|++++..+++ .+.+++||+++||+| ..|.|... ++++-.++.
T Consensus 44 ~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~ 119 (163)
T 3i7d_A 44 GVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVG 119 (163)
T ss_dssp EEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTE--EEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEE
T ss_pred EEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCE--EEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEE
Confidence 355677778773 3454 45799999999999999988 899999999999999 99999984 456555543
No 19
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.79 E-value=3.2e-08 Score=69.21 Aligned_cols=63 Identities=8% Similarity=0.102 Sum_probs=50.2
Q ss_pred EecCCcc-ccccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 82 WGCPPSK-FPWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 82 We~~pg~-f~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
+...++. .+.|. +.+|++||++|++++..+|. .+.+++||+++||+|..|.++..++.+-..+
T Consensus 43 ~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i~~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~i 107 (114)
T 2ozj_A 43 FSFADGESVSEEEYFGDTLYLILQGEAVITFDDQ--KIDLVPEDVLMVPAHKIHAIAGKGRFKMLQI 107 (114)
T ss_dssp EEEETTSSCCCBCCSSCEEEEEEEEEEEEEETTE--EEEECTTCEEEECTTCCBEEEEEEEEEEEEE
T ss_pred EEECCCCccccEECCCCeEEEEEeCEEEEEECCE--EEEecCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 3334443 34443 57999999999999999887 8999999999999999999998876654443
No 20
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.78 E-value=5.7e-08 Score=73.98 Aligned_cols=67 Identities=12% Similarity=0.072 Sum_probs=54.9
Q ss_pred eeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC---ceEEEEEe
Q 031987 79 WPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE---AVNKHYSL 147 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e---~vrK~Yvi 147 (149)
...++..||.. ++|+ ..+|++||++|++++.++|+ .+.+++||+++||+|..|.|.... +++-.+++
T Consensus 58 ~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~ 129 (167)
T 3ibm_A 58 TRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVLDDR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIV 129 (167)
T ss_dssp EEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEETTE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEE
T ss_pred EEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEE
Confidence 45677778764 3443 58999999999999999988 899999999999999999999865 56655554
No 21
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.77 E-value=2.9e-08 Score=68.03 Aligned_cols=68 Identities=15% Similarity=0.146 Sum_probs=53.4
Q ss_pred eeeEecCCccc-cccCCC--ceE-EEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEe
Q 031987 79 WPKWGCPPSKF-PWTFTA--TET-MYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSL 147 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~~~--dE~-~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi 147 (149)
...+...||.. ++|++. .|+ +||++|++++..+++ +.+.+++||++++|+|..|.+...+..+-..++
T Consensus 35 ~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~-~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~~~ 106 (110)
T 2q30_A 35 IVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGD-AVIPAPRGAVLVAPISTPHGVRAVTDMKVLVTI 106 (110)
T ss_dssp EEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGG-CEEEECTTEEEEEETTSCEEEEESSSEEEEEEE
T ss_pred EEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCC-EEEEECCCCEEEeCCCCcEEEEEcCCcEEEEEE
Confidence 45566677654 566553 587 899999999999843 489999999999999999999998886544443
No 22
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.76 E-value=4.8e-08 Score=75.94 Aligned_cols=69 Identities=16% Similarity=0.041 Sum_probs=57.1
Q ss_pred CceeeeEecCC-ccc--c-ccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc--eEEEEE
Q 031987 76 VTSWPKWGCPP-SKF--P-WTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA--VNKHYS 146 (149)
Q Consensus 76 v~~~giWe~~p-g~f--~-~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~--vrK~Yv 146 (149)
...+++-+..| |.. + .+...+|++|||+|+++++++|. .+.+++||+++||+|..|+|+.... .|-+|+
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTE--EEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCE--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 45566778889 653 2 34568999999999999999887 9999999999999999999999754 566665
No 23
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.76 E-value=2.3e-08 Score=71.23 Aligned_cols=48 Identities=13% Similarity=0.203 Sum_probs=43.8
Q ss_pred ccCCCceEEEEEEeEEEEEECCcceE--EEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 91 WTFTATETMYLLEGKVIVYVDGREGS--FEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 91 ~h~~~dE~~yVLEG~v~vt~dgg~~~--~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
.|.+.+|++|||+|+++++.+|+ . +.+++||+++||+|..|+|.....
T Consensus 49 ~~~~~~E~~~Vl~G~~~l~~~~~--~~~~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 49 YDSPQDEWVMVVSGSAGIECEGD--TAPRVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp BCCSSEEEEEEEESCEEEEETTC--SSCEEECTTEEEEECTTCCEEEEEECS
T ss_pred ccCCccEEEEEEeCeEEEEECCE--EEEEEECCCCEEEECCCCcEEEEeCCC
Confidence 45678999999999999999998 5 999999999999999999998764
No 24
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.75 E-value=3.2e-08 Score=68.05 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=50.6
Q ss_pred eeEecCCccc-cccCC--CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEE
Q 031987 80 PKWGCPPSKF-PWTFT--ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE--AVNKHY 145 (149)
Q Consensus 80 giWe~~pg~f-~~h~~--~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Y 145 (149)
..++..||.. .+|.+ .+|++||++|+++++.+|+.+.+.+++||++++|+|..|.+.... +++-.+
T Consensus 21 ~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~ 91 (97)
T 2fqp_A 21 TEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVE 91 (97)
T ss_dssp EEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEECCSSSCEEEEE
T ss_pred EEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEE
Confidence 3466667653 45543 357999999999999988423799999999999999999999865 454433
No 25
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.74 E-value=3.4e-08 Score=66.82 Aligned_cols=55 Identities=20% Similarity=0.412 Sum_probs=46.3
Q ss_pred ccccccCC-C-ceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEE
Q 031987 87 SKFPWTFT-A-TETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNK 143 (149)
Q Consensus 87 g~f~~h~~-~-dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK 143 (149)
+.+++|++ . +|++||++|++++..+|+ .+.+++||++++|+|..|.+...+..+-
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 96 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFRDQ--NITLQAGEMYVIPKGVEHKPMAKEECKI 96 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECSSC--EEEEETTEEEEECTTCCBEEEEEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEECCE--EEEEcCCCEEEECCCCeEeeEcCCCCEE
Confidence 34555544 4 899999999999999988 8999999999999999999998765443
No 26
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.72 E-value=1e-07 Score=72.56 Aligned_cols=66 Identities=9% Similarity=0.026 Sum_probs=51.9
Q ss_pred eeeEecCCccc-c---ccC-CCceEEEEEEeEEEEEECC----cceEEEEcCCcEEEEcCCcEEEEEEc---CceEEEEE
Q 031987 79 WPKWGCPPSKF-P---WTF-TATETMYLLEGKVIVYVDG----REGSFEIGTGDLVVFPKGMKITWDVI---EAVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~f-~---~h~-~~dE~~yVLEG~v~vt~dg----g~~~~~i~aGD~v~~PkG~~~tW~v~---e~vrK~Yv 146 (149)
...+...||.. . +|. +.+|++||++|++++..+| . .+.+++||+++||+|..|.|... ++.+-..+
T Consensus 119 ~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~--~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v 196 (198)
T 2bnm_A 119 PLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPK--EALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAV 196 (198)
T ss_dssp EEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCE--EEEECTTCEEEECTTCCEEEEESTTSCCEEEEEE
T ss_pred EEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCcc--cEEECCCCEEEeCCCCceEEEecCCCCCeEEEEE
Confidence 44456667653 2 443 4689999999999999998 6 89999999999999999999987 45554443
No 27
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.70 E-value=3.3e-08 Score=71.04 Aligned_cols=66 Identities=21% Similarity=0.361 Sum_probs=51.2
Q ss_pred eeeEecCCccc-cccC-CCceEEEEEEeEEEEE--ECCcceEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEEE
Q 031987 79 WPKWGCPPSKF-PWTF-TATETMYLLEGKVIVY--VDGREGSFEIGTGDLVVFPKGMKITWDVIE--AVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt--~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Yv 146 (149)
...++..||.. ++|+ +..|++||++|++++. .+|+ .+.+++||++++|+|..|.|.... +.+-.++
T Consensus 41 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i 112 (145)
T 3ht1_A 41 LTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQGR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVV 112 (145)
T ss_dssp EEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGTE--EEEECTTCEEEECTTCCBEEECCTTCCEEEEEE
T ss_pred EEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeECCE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEE
Confidence 44566667653 4554 3678889999999999 8776 899999999999999999999854 3444443
No 28
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.70 E-value=7.3e-08 Score=69.13 Aligned_cols=50 Identities=18% Similarity=0.244 Sum_probs=43.3
Q ss_pred ccccCC--CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 89 FPWTFT--ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 89 f~~h~~--~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
+++|++ .+|++||++|++++..+|+ +.+.+++||++++|+|..|.+....
T Consensus 56 ~~~H~H~~~~E~~~vl~G~~~~~~~~~-~~~~l~~Gd~~~ip~g~~H~~~~~~ 107 (134)
T 2o8q_A 56 PTWHTHTVGFQLFYVLRGWVEFEYEDI-GAVMLEAGGSAFQPPGVRHRELRHS 107 (134)
T ss_dssp CCCEEECCSCEEEEEEESEEEEEETTT-EEEEEETTCEEECCTTCCEEEEEEC
T ss_pred CCCEECCCCcEEEEEEeCEEEEEECCc-EEEEecCCCEEEECCCCcEEeEeCC
Confidence 345543 4899999999999999994 4899999999999999999999843
No 29
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.67 E-value=4.6e-08 Score=76.26 Aligned_cols=69 Identities=17% Similarity=0.281 Sum_probs=55.5
Q ss_pred ceeeeEecCCccc-cccCC-CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc--CceEEEEEe
Q 031987 77 TSWPKWGCPPSKF-PWTFT-ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI--EAVNKHYSL 147 (149)
Q Consensus 77 ~~~giWe~~pg~f-~~h~~-~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~--e~vrK~Yvi 147 (149)
.....++..||.. .+|.+ .+|++|||+|+++++.+++ +.+.+++||++ ||+|..|.|+.. ++.|-.+++
T Consensus 79 ~~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld~g-e~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~ 151 (172)
T 3es1_A 79 SVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDG-AKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFIL 151 (172)
T ss_dssp EEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGGG-CEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEE
T ss_pred eEEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEECCC-eEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEE
Confidence 3445677778865 56655 5789999999999999855 58999999999 999999999986 457766665
No 30
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.67 E-value=1.2e-07 Score=71.91 Aligned_cols=67 Identities=12% Similarity=0.206 Sum_probs=53.2
Q ss_pred eeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc--CceEEEEEe
Q 031987 79 WPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI--EAVNKHYSL 147 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~--e~vrK~Yvi 147 (149)
...++..||.. ++|+ ..+|++||++|+++++++|+ .+.+++||+++||+|..|.+... ++++-.+++
T Consensus 46 ~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v~g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~ 116 (156)
T 3kgz_A 46 WRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLVGET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVV 116 (156)
T ss_dssp EEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEETTE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred EEEEEECCCCccCceeCCCcEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 44566666653 4443 46899999999999999887 89999999999999999999985 446655554
No 31
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.67 E-value=1.3e-07 Score=74.68 Aligned_cols=67 Identities=7% Similarity=0.136 Sum_probs=56.8
Q ss_pred eeeeEecCCccc-ccc-CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 78 SWPKWGCPPSKF-PWT-FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 78 ~~giWe~~pg~f-~~h-~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
..-.+.-.+|.. +.| ++.+|+.|||||+++++.+|. ...++|||.+++|+|..|.++..++.+-..+
T Consensus 38 ~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~--~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 38 YISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIENN--KKTISNGDFLEITANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp EEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEESSC--EEEEETTEEEEECSSCCEEEEESSSEEEEEE
T ss_pred EEEEEEECCCCccCccccCCCEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCCEEEEECCCcEEEEE
Confidence 445677788875 455 578999999999999999987 8999999999999999999999988665543
No 32
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.66 E-value=1.9e-07 Score=68.88 Aligned_cols=65 Identities=11% Similarity=0.015 Sum_probs=51.3
Q ss_pred eeeEecCCccc-cccC--CCceEEEEEEeEEEEEECCcceE------EEEcCCcEEEEcCCcEEEEEEcC--ceEEEE
Q 031987 79 WPKWGCPPSKF-PWTF--TATETMYLLEGKVIVYVDGREGS------FEIGTGDLVVFPKGMKITWDVIE--AVNKHY 145 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~--~~dE~~yVLEG~v~vt~dgg~~~------~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Y 145 (149)
...+...||.. ++|+ ..+|++||++|++++..+|+ . +.+++||+++||+|..|.+.... +++-..
T Consensus 45 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~--~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 45 VTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHR--QDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp EEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESB--TTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred EEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCc--cccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 44566677653 4554 35799999999999999988 5 99999999999999999999864 444433
No 33
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.64 E-value=1.4e-07 Score=66.15 Aligned_cols=58 Identities=14% Similarity=0.305 Sum_probs=47.5
Q ss_pred eEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEE-EEcCCcEEEEcCCcEEEEEEcCc
Q 031987 81 KWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSF-EIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 81 iWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~-~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
.+...||.. ++|+ +.+|++||++|++++..+++ .+ .+++||++++|+|..|.++..+.
T Consensus 31 ~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~ 91 (117)
T 2b8m_A 31 HIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLEDQ--EPHNYKEGNIVYVPFNVKMLIQNINS 91 (117)
T ss_dssp EEEEETTCBCCCEECSSCEEEEEEESEEEEEETTS--CCEEEETTCEEEECTTCEEEEECCSS
T ss_pred EEEECCCCcCCCEeCCCcEEEEEEeCEEEEEECCE--EEEEeCCCCEEEECCCCcEEeEcCCC
Confidence 344455543 4453 57999999999999999988 67 99999999999999999998654
No 34
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.64 E-value=1.5e-07 Score=74.34 Aligned_cols=69 Identities=17% Similarity=0.201 Sum_probs=58.4
Q ss_pred ceeeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEE-cCceEEEEEe
Q 031987 77 TSWPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDV-IEAVNKHYSL 147 (149)
Q Consensus 77 ~~~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v-~e~vrK~Yvi 147 (149)
.....|...||.. ++|. +.+|++|||+|+++++.+|+ .+.+++||++++|+|..|.+.. .++.+-..++
T Consensus 153 ~~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~g~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~~ 224 (227)
T 3rns_A 153 LVMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYVDGK--PFIVKKGESAVLPANIPHAVEAETENFKMLLIL 224 (227)
T ss_dssp EEEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEETTE--EEEEETTEEEEECTTSCEEEECCSSCEEEEEEE
T ss_pred eEEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEECCE--EEEECCCCEEEECCCCcEEEEeCCCCEEEEEEE
Confidence 4456788888875 5554 47899999999999999987 8999999999999999999999 8888776653
No 35
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.64 E-value=2.4e-07 Score=67.26 Aligned_cols=66 Identities=17% Similarity=0.232 Sum_probs=52.6
Q ss_pred eeeEecCCccc-cccCC--CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEEE
Q 031987 79 WPKWGCPPSKF-PWTFT--ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE--AVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~~--~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Yv 146 (149)
...+...||.. .+|.+ .+|++||++|++++..+|. .+.+++||++++|+|..+.|.... +.+-.++
T Consensus 59 ~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 59 FARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp EEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETTE--EEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred EEEEEECCCCccCceECCCccEEEEEEeCEEEEEECCE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 34566677753 45554 5899999999999999987 899999999999999999999864 4554443
No 36
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.61 E-value=1.6e-07 Score=71.87 Aligned_cols=68 Identities=15% Similarity=0.114 Sum_probs=53.4
Q ss_pred eeeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc--CceEEEEEe
Q 031987 78 SWPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI--EAVNKHYSL 147 (149)
Q Consensus 78 ~~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~--e~vrK~Yvi 147 (149)
....++..||.. ++|+ ..+|++||++|++++.++|+ .+.+++||++++|+|..|.+... ++++-++++
T Consensus 54 ~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v~g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~ 125 (166)
T 3jzv_A 54 ELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMVGRA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMV 125 (166)
T ss_dssp EEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEETTE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEEE
T ss_pred EEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 345566677754 4443 46899999999999999887 89999999999999999999975 445555544
No 37
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.61 E-value=8.8e-08 Score=74.08 Aligned_cols=54 Identities=9% Similarity=0.088 Sum_probs=45.1
Q ss_pred ccccCCCceEEEEEE--eEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 89 FPWTFTATETMYLLE--GKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 89 f~~h~~~dE~~yVLE--G~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
.+||...+|++|||+ |++++.++|+ .+.+++||++++|+|..|++. ..++-..+
T Consensus 60 ~H~H~~~~E~~yVLe~~G~g~v~idge--~~~l~~GD~v~IPpg~~H~i~--g~l~~L~I 115 (157)
T 4h7l_A 60 THYHREHQEIYVVLDHAAHATIELNGQ--SYPLTKLLAISIPPLVRHRIV--GEATIINI 115 (157)
T ss_dssp CBBCSSCEEEEEEEEECTTCEEEETTE--EEECCTTEEEEECTTCCEEEE--SCEEEEEE
T ss_pred ceECCCCcEEEEEEecCcEEEEEECCE--EEEeCCCCEEEECCCCeEeeE--CCEEEEEE
Confidence 355555689999999 9999999887 899999999999999999996 35554443
No 38
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.59 E-value=3.1e-07 Score=65.03 Aligned_cols=56 Identities=16% Similarity=0.245 Sum_probs=46.7
Q ss_pred EecCCcc-ccccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 82 WGCPPSK-FPWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 82 We~~pg~-f~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
....||. .++|+ +..|++||++|++++..+|. .+.+++||++++|+|..|.+....
T Consensus 39 ~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i~~~--~~~l~~Gd~~~i~~~~~H~~~~~~ 96 (128)
T 4i4a_A 39 CIVRPETKSFRHSHNEYELFIVIQGNAIIRINDE--DFPVTKGDLIIIPLDSEHHVINNN 96 (128)
T ss_dssp EEECTTEECCCBCCSSEEEEEEEESEEEEEETTE--EEEEETTCEEEECTTCCEEEEECS
T ss_pred EEECCCCccCCEecCCeEEEEEEeCEEEEEECCE--EEEECCCcEEEECCCCcEEeEeCC
Confidence 4445554 23443 58999999999999999888 899999999999999999999853
No 39
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.59 E-value=3.5e-07 Score=64.91 Aligned_cols=59 Identities=20% Similarity=0.207 Sum_probs=46.4
Q ss_pred eeeEecCCccc-c-ccCC-C-ceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 79 WPKWGCPPSKF-P-WTFT-A-TETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 79 ~giWe~~pg~f-~-~h~~-~-dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
...+...|+.. + +|++ . ++++||++|++++.+++. .+.+++||++++|+|..+.|....
T Consensus 28 ~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~--~~~l~~Gd~i~i~~~~~H~~~~~~ 90 (125)
T 3cew_A 28 VSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGE--KIELQAGDWLRIAPDGKRQISAAS 90 (125)
T ss_dssp EEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTE--EEEEETTEEEEECTTCCEEEEEBT
T ss_pred EEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCcEEEEcCC
Confidence 44556666653 3 4543 3 455569999999999987 899999999999999999999863
No 40
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.58 E-value=2.6e-07 Score=68.80 Aligned_cols=69 Identities=10% Similarity=0.007 Sum_probs=52.8
Q ss_pred eeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcc-------eEEEEcCCcEEEEcCCcEEEEEEcC---ceEEEEE
Q 031987 79 WPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGRE-------GSFEIGTGDLVVFPKGMKITWDVIE---AVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~-------~~~~i~aGD~v~~PkG~~~tW~v~e---~vrK~Yv 146 (149)
.......||.. ++|+ ..+|++||++|++++..++++ +.+.+++||++++|+|..|.+.... +++-.++
T Consensus 43 ~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i 122 (163)
T 1lr5_A 43 VWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVI 122 (163)
T ss_dssp EEEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEE
T ss_pred EEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEE
Confidence 34455666653 3443 578999999999999999821 3899999999999999999999865 5555544
Q ss_pred e
Q 031987 147 L 147 (149)
Q Consensus 147 i 147 (149)
+
T Consensus 123 ~ 123 (163)
T 1lr5_A 123 I 123 (163)
T ss_dssp E
T ss_pred E
Confidence 3
No 41
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.58 E-value=2.4e-07 Score=66.40 Aligned_cols=65 Identities=11% Similarity=0.088 Sum_probs=51.4
Q ss_pred eeeEecCCcc-ccccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEE
Q 031987 79 WPKWGCPPSK-FPWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE--AVNKHY 145 (149)
Q Consensus 79 ~giWe~~pg~-f~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Y 145 (149)
...++..|+. +++|+ +..|++||++|++++..+++ .+.+++||++++|+|..+.|.... +.+-..
T Consensus 50 ~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 50 MRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp EEEEEEEEEEEEEEECCSSCEEEEEEESEEEEECSSC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred EEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEECCE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 4445556654 34554 37999999999999999987 899999999999999999999864 344433
No 42
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.57 E-value=2.6e-07 Score=74.04 Aligned_cols=64 Identities=19% Similarity=0.147 Sum_probs=52.8
Q ss_pred eeEecCCccc-cccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 80 PKWGCPPSKF-PWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 80 giWe~~pg~f-~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
..++..||.- ..+. .+|++|||+|+++++.+|. .+.+++||+++||+|..|.|+..++.+-.++
T Consensus 53 ~~~~l~Pg~~~~~~~-~ee~~~Vl~G~~~~~~~~~--~~~l~~Gd~~~~p~~~~H~~~n~~~~~~l~v 117 (246)
T 1sfn_A 53 FTAEMPAGAQATESV-YQRFAFVLSGEVDVAVGGE--TRTLREYDYVYLPAGEKHMLTAKTDARVSVF 117 (246)
T ss_dssp EEEEECTTCEEECCS-SEEEEEEEEEEEEEECSSC--EEEECTTEEEEECTTCCCEEEEEEEEEEEEE
T ss_pred EEEEECCCCcCCCCc-eeEEEEEEECEEEEEECCE--EEEECCCCEEEECCCCCEEEEeCCCEEEEEE
Confidence 4466677654 3345 8999999999999999988 8999999999999999999999866664444
No 43
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.57 E-value=1.4e-07 Score=79.47 Aligned_cols=58 Identities=22% Similarity=0.409 Sum_probs=51.1
Q ss_pred cccc-CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEe
Q 031987 89 FPWT-FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSL 147 (149)
Q Consensus 89 f~~h-~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi 147 (149)
.+.| .+.||++|||||+++++++|. +.+.+++||++++|+|..+.++..+..++++++
T Consensus 265 ~~~h~~~~~~~~~vleG~~~i~i~g~-~~~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~ 323 (350)
T 1juh_A 265 VPTWSFPGACAFQVQEGRVVVQIGDY-AATELGSGDVAFIPGGVEFKYYSEAYFSKVLFV 323 (350)
T ss_dssp CCCBCCSSCEEEEEEESCEEEEETTS-CCEEECTTCEEEECTTCCEEEEESSSSEEEEEE
T ss_pred CCcccCCCcEEEEEEeeEEEEEECCe-EEEEeCCCCEEEECCCCCEEEEecCCeEEEEEE
Confidence 3444 679999999999999999994 489999999999999999999998887777765
No 44
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.56 E-value=3.4e-07 Score=69.60 Aligned_cols=59 Identities=15% Similarity=0.138 Sum_probs=48.9
Q ss_pred eeEecCCccc---cccCC-CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 80 PKWGCPPSKF---PWTFT-ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 80 giWe~~pg~f---~~h~~-~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
-.+...||.. ++|.+ .+|++|||+|++++..+|. .+.+++||+++||+|..|.|+....
T Consensus 107 ~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~~~~--~~~l~~GD~i~i~~~~~H~~~n~~~ 169 (192)
T 1y9q_A 107 FEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQ--WHELQQGEHIRFFSDQPHGYAAVTE 169 (192)
T ss_dssp EEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETTE--EEEECTTCEEEEECSSSEEEEESSS
T ss_pred EEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEECCE--EEEeCCCCEEEEcCCCCeEeECCCC
Confidence 3456667653 25644 5999999999999999877 8999999999999999999999743
No 45
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.56 E-value=3.8e-07 Score=73.26 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=49.9
Q ss_pred eeeEecCCccc---cccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 79 WPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 79 ~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
...+...||.. ++|...+|++|||+|++++.++|. .+.+++||+++||+|..|.|+....
T Consensus 181 ~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~--~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 181 MHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN--WIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSC--EEEEETTCEEEECSSEEEEEEEC--
T ss_pred EEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCE--EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 45677778764 344457899999999999999987 8999999999999999999998743
No 46
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.52 E-value=3.7e-07 Score=73.93 Aligned_cols=71 Identities=8% Similarity=0.077 Sum_probs=60.2
Q ss_pred CceeeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc-CceEEEEEe
Q 031987 76 VTSWPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI-EAVNKHYSL 147 (149)
Q Consensus 76 v~~~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~-e~vrK~Yvi 147 (149)
....|+|...||.. ++|. ..+|++|||+|++++..+++ +.+.+++||++++|.|..|.+++. +++.-.|+.
T Consensus 131 ~l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~g-~~~~l~pGd~v~ipsgv~Ha~rt~dePllalwvW 204 (217)
T 4b29_A 131 SLRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLRNA-PDLMLEPGQTRFHPANAPHAMTTLTDPILTLVLW 204 (217)
T ss_dssp SCEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEETTS-CCEEECTTCEEEECTTCCEEEECCSSCEEEEEEE
T ss_pred eEEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEECCC-CEEecCCCCEEEcCCCCceeEEECCccEEEEEEE
Confidence 34568899999975 7774 48999999999999999977 699999999999999999999875 457767764
No 47
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.52 E-value=7.3e-07 Score=68.44 Aligned_cols=70 Identities=11% Similarity=0.139 Sum_probs=53.9
Q ss_pred ceeeeEecCCccc-cc-cCCCceEEEEEEeEEEEEEC--CcceEEEEcCCcEEEEcCCcEEEEEEcC---ceEEEEE
Q 031987 77 TSWPKWGCPPSKF-PW-TFTATETMYLLEGKVIVYVD--GREGSFEIGTGDLVVFPKGMKITWDVIE---AVNKHYS 146 (149)
Q Consensus 77 ~~~giWe~~pg~f-~~-h~~~dE~~yVLEG~v~vt~d--gg~~~~~i~aGD~v~~PkG~~~tW~v~e---~vrK~Yv 146 (149)
.+....+..||.. .. |.+.+|++||++|+++++.. +++..+.+++||+++||+|..|.+.... +++-.++
T Consensus 41 ~~~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v 117 (178)
T 1dgw_A 41 YRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKF 117 (178)
T ss_dssp EEEEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEE
T ss_pred EEEEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEE
Confidence 4455677888875 23 45679999999999999885 2226899999999999999999999863 4444443
No 48
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.51 E-value=6.5e-07 Score=72.86 Aligned_cols=62 Identities=16% Similarity=0.228 Sum_probs=50.8
Q ss_pred ceeeeEecCCccc---cccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 77 TSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 77 ~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
......+..||.. ++|...+|++|||+|+++++.+|. .+.+++||+++||+|..|.|.....
T Consensus 46 ~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~--~~~l~~Gd~~~~p~~~~H~~~n~~~ 110 (337)
T 1y3t_A 46 FEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGE--RYLLISGDYANIPAGTPHSYRMQSH 110 (337)
T ss_dssp EEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETTE--EEEECTTCEEEECTTCCEEEEECST
T ss_pred EEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECCE--EEEECCCCEEEECCCCcEEEEECCC
Confidence 3444566777654 344337999999999999999876 8999999999999999999999765
No 49
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.50 E-value=1.8e-06 Score=67.17 Aligned_cols=76 Identities=24% Similarity=0.293 Sum_probs=55.4
Q ss_pred hhhcCCceeeeEecCCccc-cccCC--CceEEEEEEeEEEEEECCc----ce--EEEEcCCcEEEEcCCcEEEEEEc--C
Q 031987 71 LSELGVTSWPKWGCPPSKF-PWTFT--ATETMYLLEGKVIVYVDGR----EG--SFEIGTGDLVVFPKGMKITWDVI--E 139 (149)
Q Consensus 71 L~~lGv~~~giWe~~pg~f-~~h~~--~dE~~yVLEG~v~vt~dgg----~~--~~~i~aGD~v~~PkG~~~tW~v~--e 139 (149)
+...|. +....+..||.. ++|++ .+|++||++|++++...++ ++ .+.+++||+++||+|..|.+... +
T Consensus 67 l~~~~~-~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~ 145 (201)
T 1fi2_A 67 TNTLGV-SMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKT 145 (201)
T ss_dssp GTTSSC-EEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSS
T ss_pred cccCce-EEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCC
Confidence 444443 344567777764 45544 5799999999999988532 25 78999999999999999999975 4
Q ss_pred ceEEEEEe
Q 031987 140 AVNKHYSL 147 (149)
Q Consensus 140 ~vrK~Yvi 147 (149)
+++-.+++
T Consensus 146 ~~~~l~v~ 153 (201)
T 1fi2_A 146 EAYMVVSF 153 (201)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 45555544
No 50
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.50 E-value=9.9e-07 Score=73.12 Aligned_cols=70 Identities=20% Similarity=0.363 Sum_probs=54.3
Q ss_pred eeeeEecCCccc---cccCCCceEEEEEEeEEEEEE---CCcceEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEEEe
Q 031987 78 SWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYV---DGREGSFEIGTGDLVVFPKGMKITWDVIE--AVNKHYSL 147 (149)
Q Consensus 78 ~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~---dgg~~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Yvi 147 (149)
........||.. +||.+.+|++||++|+++++. +|....+.+++||+++||+|..|.+...+ +++-..++
T Consensus 53 ~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~ 130 (361)
T 2vqa_A 53 AGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVF 130 (361)
T ss_dssp EEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred eeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEE
Confidence 344566677765 455558999999999999999 44224689999999999999999999985 55554444
No 51
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.49 E-value=8.9e-07 Score=65.60 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=50.1
Q ss_pred eeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceE-EEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 79 WPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGS-FEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~-~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
...+...||.. ++|. +..|++||++|++++..+++ . +.+++||++++|+|..|.+.....
T Consensus 50 ~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~ 112 (147)
T 2f4p_A 50 VYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERGK--PARILKKGDVVEIPPNVVHWHGAAPD 112 (147)
T ss_dssp EEEEEECTTCEECSEECTTCEEEEEEEEEEEEEETTS--CCEEEETTCEEEECTTCCEEEEEBTT
T ss_pred EEEEEECCCCccCceECCCceEEEEEeCEEEEEECCE--EEEEECCCCEEEECCCCcEEeEeCCC
Confidence 45566677653 4554 46999999999999999988 6 999999999999999999998754
No 52
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.48 E-value=8.4e-07 Score=68.76 Aligned_cols=68 Identities=16% Similarity=0.046 Sum_probs=52.3
Q ss_pred CceeeeEecCCccc-------cccCC----CceEEEEEEeEEEEEECCcce----EEEEcCCcEEEEcCCcEEEEEEcC-
Q 031987 76 VTSWPKWGCPPSKF-------PWTFT----ATETMYLLEGKVIVYVDGREG----SFEIGTGDLVVFPKGMKITWDVIE- 139 (149)
Q Consensus 76 v~~~giWe~~pg~f-------~~h~~----~dE~~yVLEG~v~vt~dgg~~----~~~i~aGD~v~~PkG~~~tW~v~e- 139 (149)
....+.....||.. ++|++ .+|++||++|++++..++. . .+.+++||++++|+|..|.+....
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~-~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTP-EGDAKWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECT-TCCEEEEEECTTCEEEECTTCEEEEEECSS
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCc-CCcEEEEEECCCcEEEECCCCeEEEEECCc
Confidence 34456667777764 24443 3799999999999999887 2 389999999999999999999864
Q ss_pred -ceEEE
Q 031987 140 -AVNKH 144 (149)
Q Consensus 140 -~vrK~ 144 (149)
+++-.
T Consensus 145 ~~~~~l 150 (190)
T 1x82_A 145 EPFIFL 150 (190)
T ss_dssp SCEEEE
T ss_pred ccEEEE
Confidence 45433
No 53
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.48 E-value=3.9e-07 Score=73.15 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=50.8
Q ss_pred eeEecCCccc---ccc-CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc--CceEEEEE
Q 031987 80 PKWGCPPSKF---PWT-FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI--EAVNKHYS 146 (149)
Q Consensus 80 giWe~~pg~f---~~h-~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~--e~vrK~Yv 146 (149)
..++..||.. +.| ...+|++|||+|+++++.+|. .+.+++||+++||+|..|.|+.. ++.+-.++
T Consensus 62 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v 132 (261)
T 1rc6_A 62 YLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLY 132 (261)
T ss_dssp EEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred EEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECCE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 3455566653 222 236899999999999999887 89999999999999999999997 44554444
No 54
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.47 E-value=3.8e-07 Score=75.47 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=53.5
Q ss_pred eeeEecCCcccc-c-cCCCceEEEEEEeEEEEEEC-CcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 79 WPKWGCPPSKFP-W-TFTATETMYLLEGKVIVYVD-GREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~f~-~-h~~~dE~~yVLEG~v~vt~d-gg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
-...+..||... . +...+|++|||+|+++++++ |. ++.+++||+++||+|..|+|+..++.|-+++
T Consensus 72 ~~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~~g~--~~~L~~Gds~y~p~~~~H~~~N~~~Ar~l~V 140 (266)
T 4e2q_A 72 MYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNTSSS--SKKLTVDSYAYLPPNFHHSLDCVESATLVVF 140 (266)
T ss_dssp EEEEEECSSEECCCCCTTEEEEEEEEEECEEEEC--CC--CEEECTTEEEEECTTCCCEEEESSCEEEEEE
T ss_pred EEEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEECCCc--EEEEcCCCEEEECCCCCEEEEeCCCEEEEEE
Confidence 445666777642 2 34579999999999999998 55 8999999999999999999999988776665
No 55
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.47 E-value=1.1e-06 Score=63.64 Aligned_cols=59 Identities=19% Similarity=0.266 Sum_probs=49.2
Q ss_pred eeeEecCCccc-------cccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 79 WPKWGCPPSKF-------PWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 79 ~giWe~~pg~f-------~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
+|.+.|.++.. +...+.-|++||++|++++.++|. .+.+++||++++|+|..|.+....
T Consensus 15 ~G~~~~~~~~~~~~~~~~p~~h~~~~i~~v~~G~~~~~i~~~--~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 15 AGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGR--EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEEEEEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEETTE--EEEECTTCEEEECTTCCEEEEECT
T ss_pred hcceeeccCCchhhhhccccCCCceEEEEEEEeEEEEEECCE--EEEecCCeEEEEcCCCCEEEEeCC
Confidence 67777777533 112467899999999999999988 899999999999999999999864
No 56
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.47 E-value=4.1e-07 Score=74.53 Aligned_cols=66 Identities=15% Similarity=0.241 Sum_probs=52.7
Q ss_pred eeeEecCCccc---ccc-CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc--CceEEEEE
Q 031987 79 WPKWGCPPSKF---PWT-FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI--EAVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~f---~~h-~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~--e~vrK~Yv 146 (149)
...++..||.. ++| ...+|++|||+|+++++.+|. .+.+++||+++||+|..|.|+.. ++.+-.++
T Consensus 70 ~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v 141 (278)
T 1sq4_A 70 QYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWI 141 (278)
T ss_dssp EEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSC--EEEECTTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred EEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 34566666653 333 457999999999999999987 89999999999999999999987 45555544
No 57
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.46 E-value=1.6e-06 Score=76.12 Aligned_cols=79 Identities=14% Similarity=0.170 Sum_probs=62.3
Q ss_pred hhhhcCCceeeeEecCCcccc--ccCCCceEEEEEEeEEEEEE--CCcceEEEEcCCcEEEEcCCcEEEEEEcC---ceE
Q 031987 70 KLSELGVTSWPKWGCPPSKFP--WTFTATETMYLLEGKVIVYV--DGREGSFEIGTGDLVVFPKGMKITWDVIE---AVN 142 (149)
Q Consensus 70 ~L~~lGv~~~giWe~~pg~f~--~h~~~dE~~yVLEG~v~vt~--dgg~~~~~i~aGD~v~~PkG~~~tW~v~e---~vr 142 (149)
.+...|..+....+..||... .|.+.+|++|||+|+++++. .++++.+.+++||+++||+|..|-|.... +++
T Consensus 79 ~l~~~g~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~ 158 (445)
T 2cav_A 79 KLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLR 158 (445)
T ss_dssp TTGGGTTEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEE
T ss_pred cccccCcEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEE
Confidence 455566667778999999862 35578999999999999986 34337889999999999999999999974 566
Q ss_pred EEEEec
Q 031987 143 KHYSLE 148 (149)
Q Consensus 143 K~Yvi~ 148 (149)
-..+++
T Consensus 159 ~l~v~~ 164 (445)
T 2cav_A 159 ILKFAI 164 (445)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 555554
No 58
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.45 E-value=4.2e-07 Score=72.36 Aligned_cols=62 Identities=11% Similarity=0.015 Sum_probs=51.1
Q ss_pred cCC-ccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc--CceEEEEEe
Q 031987 84 CPP-SKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI--EAVNKHYSL 147 (149)
Q Consensus 84 ~~p-g~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~--e~vrK~Yvi 147 (149)
..| |.. ++|. ..+|++|||+|+++++.+|+ .+.+++||+++||+|..|.+... ++.+-.+++
T Consensus 152 ~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~ 218 (243)
T 3h7j_A 152 IPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGC--TVEMKFGTAYFCEPREDHGAINRSEKESKSINIF 218 (243)
T ss_dssp ECTTTEEEEEECCSSEEEEEECSSCEEEEETTE--EEEECTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred ECCCCCcCCCEeCCCcEEEEEEECEEEEEECCE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 456 542 4453 36899999999999999988 89999999999999999999988 557666665
No 59
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.45 E-value=9.4e-07 Score=71.61 Aligned_cols=61 Identities=11% Similarity=0.210 Sum_probs=50.8
Q ss_pred eeeeEecCCccc-cc-cC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 78 SWPKWGCPPSKF-PW-TF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 78 ~~giWe~~pg~f-~~-h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
....+...||.. ++ |+ ..+|++|||+|++++.++|. .+.+++||+++||+|..|.|.....
T Consensus 183 ~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i~~~--~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 183 NMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNE--WYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETTE--EEEEETTCEEEECTTCCEEEEEECS
T ss_pred EEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCCEEEEeCCC
Confidence 345567777764 34 43 47899999999999999887 8999999999999999999998744
No 60
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.44 E-value=8.4e-07 Score=72.17 Aligned_cols=55 Identities=24% Similarity=0.428 Sum_probs=45.9
Q ss_pred ccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc-eEEEEEe
Q 031987 91 WTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA-VNKHYSL 147 (149)
Q Consensus 91 ~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~-vrK~Yvi 147 (149)
+|...+|++|||+|+++++++|. .+.+++||+++||+|..|.|..... .+-.+++
T Consensus 235 ~H~~~~e~~~vl~G~~~~~i~~~--~~~l~~GD~~~ip~~~~H~~~n~~~~~~~l~v~ 290 (337)
T 1y3t_A 235 YHEYHTETFYCLEGQMTMWTDGQ--EIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVL 290 (337)
T ss_dssp ECSSCEEEEEEEESCEEEEETTE--EEEECTTCEEEECTTCCEEEEECSSSEEEEEEE
T ss_pred CCCCCcEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCeEEEEECCCCeEEEEEE
Confidence 33336999999999999999887 8999999999999999999999864 4444333
No 61
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.43 E-value=3.7e-07 Score=71.79 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=44.9
Q ss_pred EecCCc-cccccC-CCceEEEEEEeEEEEEECCcc--eEEEEcCCcEEEEcCCcEEEEEEc
Q 031987 82 WGCPPS-KFPWTF-TATETMYLLEGKVIVYVDGRE--GSFEIGTGDLVVFPKGMKITWDVI 138 (149)
Q Consensus 82 We~~pg-~f~~h~-~~dE~~yVLEG~v~vt~dgg~--~~~~i~aGD~v~~PkG~~~tW~v~ 138 (149)
+..+|+ .++||. +.||++|+|+|++.+...+++ ..+.+++||.+++|+|..|.-.-.
T Consensus 40 ~v~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~ 100 (174)
T 1yfu_A 40 VVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRP 100 (174)
T ss_dssp EECSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBC
T ss_pred EEcCCCcCccCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCcccc
Confidence 344453 467774 589999999999999996631 479999999999999999976433
No 62
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.41 E-value=6.7e-07 Score=72.51 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=50.6
Q ss_pred eeEecCCccc---ccc-CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc--CceEEEEE
Q 031987 80 PKWGCPPSKF---PWT-FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI--EAVNKHYS 146 (149)
Q Consensus 80 giWe~~pg~f---~~h-~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~--e~vrK~Yv 146 (149)
..++..||.- +.+ ...+|++|||||+++++++|. .+.+++||+++||+|..|.|+.. ++.+-.++
T Consensus 65 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v 135 (274)
T 1sef_A 65 YIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQE--THELEAGGYAYFTPEMKMYLANAQEADTEVFLY 135 (274)
T ss_dssp EEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSC--EEEEETTEEEEECTTSCCEEEESSSSCEEEEEE
T ss_pred EEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECCE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 3455556653 222 346899999999999999887 89999999999999999999997 44554443
No 63
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.40 E-value=1.3e-06 Score=69.50 Aligned_cols=61 Identities=8% Similarity=-0.039 Sum_probs=51.3
Q ss_pred eeeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEE-EcCCcEEEEEEcCc
Q 031987 78 SWPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVV-FPKGMKITWDVIEA 140 (149)
Q Consensus 78 ~~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~-~PkG~~~tW~v~e~ 140 (149)
....|...||.. ++|. +.+|++||++|+++++++|+ ...+++||+++ +|+|..|.|+..+.
T Consensus 35 ~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~~~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTVGDV--TRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp EEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEETTE--EEEEETTTCEEEECTTCCEEEEECSS
T ss_pred EEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEECCE--EEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 345677788864 5564 48999999999999999877 89999999996 99999999999755
No 64
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.37 E-value=5.1e-07 Score=71.11 Aligned_cols=55 Identities=16% Similarity=0.206 Sum_probs=46.1
Q ss_pred eEecCCcc-ccccC-CCceEEEEEEeEEEEEECCcc------eEEEEcCCcEEEEcCCcEEEE
Q 031987 81 KWGCPPSK-FPWTF-TATETMYLLEGKVIVYVDGRE------GSFEIGTGDLVVFPKGMKITW 135 (149)
Q Consensus 81 iWe~~pg~-f~~h~-~~dE~~yVLEG~v~vt~dgg~------~~~~i~aGD~v~~PkG~~~tW 135 (149)
+|..+|+. ++||. +.||++|+|+|++.+.+.+++ ..+.+++||.+.+|+|..|.=
T Consensus 38 ~~vgGPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP 100 (176)
T 1zvf_A 38 MIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSP 100 (176)
T ss_dssp EEECSSBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEE
T ss_pred EEEcCCCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCC
Confidence 46667766 78885 589999999999999997742 379999999999999999854
No 65
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.37 E-value=8.6e-07 Score=74.70 Aligned_cols=51 Identities=14% Similarity=0.290 Sum_probs=43.5
Q ss_pred cccCCCceEEEEEEeEEEEEECC---cceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 90 PWTFTATETMYLLEGKVIVYVDG---REGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 90 ~~h~~~dE~~yVLEG~v~vt~dg---g~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
|+|...+|++|||+|++++.+++ ..+.+.+++||+++||+|..|.|.....
T Consensus 66 H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~ 119 (350)
T 1juh_A 66 HIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDP 119 (350)
T ss_dssp EECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECST
T ss_pred ccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCC
Confidence 34555799999999999999988 1138999999999999999999999754
No 66
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.36 E-value=2.6e-06 Score=74.38 Aligned_cols=78 Identities=12% Similarity=0.128 Sum_probs=61.7
Q ss_pred hhhhcCCceeeeEecCCccc-cc-cCCCceEEEEEEeEEEEEE--CCcceEEEEcCCcEEEEcCCcEEEEEEcC---ceE
Q 031987 70 KLSELGVTSWPKWGCPPSKF-PW-TFTATETMYLLEGKVIVYV--DGREGSFEIGTGDLVVFPKGMKITWDVIE---AVN 142 (149)
Q Consensus 70 ~L~~lGv~~~giWe~~pg~f-~~-h~~~dE~~yVLEG~v~vt~--dgg~~~~~i~aGD~v~~PkG~~~tW~v~e---~vr 142 (149)
.+.-.|..+.......||.. .. |.+.+|++|||+|++++.. +++.....+++||+++||+|..|-+.... +++
T Consensus 54 ~l~~~~~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~ 133 (434)
T 2ea7_A 54 QMQNLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLR 133 (434)
T ss_dssp GGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEE
T ss_pred ccCccccEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeE
Confidence 45666766778899999987 23 5568999999999999987 33347899999999999999999999875 455
Q ss_pred EEEEe
Q 031987 143 KHYSL 147 (149)
Q Consensus 143 K~Yvi 147 (149)
-..++
T Consensus 134 ~l~~~ 138 (434)
T 2ea7_A 134 IIKLA 138 (434)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 54443
No 67
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.32 E-value=2.6e-06 Score=73.97 Aligned_cols=78 Identities=15% Similarity=0.250 Sum_probs=60.6
Q ss_pred hhhhcCCceeeeEecCCccc-c-ccCCCceEEEEEEeEEEEEE--CCcceEEEEcCCcEEEEcCCcEEEEEEc---CceE
Q 031987 70 KLSELGVTSWPKWGCPPSKF-P-WTFTATETMYLLEGKVIVYV--DGREGSFEIGTGDLVVFPKGMKITWDVI---EAVN 142 (149)
Q Consensus 70 ~L~~lGv~~~giWe~~pg~f-~-~h~~~dE~~yVLEG~v~vt~--dgg~~~~~i~aGD~v~~PkG~~~tW~v~---e~vr 142 (149)
.+...|..+.......||.. . .|.+.+|++|||+|+++++. .++++...+++||+++||+|..|.+... ++++
T Consensus 42 ~l~~~~~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~ 121 (416)
T 1uij_A 42 QLENLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLK 121 (416)
T ss_dssp GGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEE
T ss_pred cccCcccEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCEE
Confidence 35555656678899999986 2 35678999999999999987 2223789999999999999999999987 3555
Q ss_pred EEEEe
Q 031987 143 KHYSL 147 (149)
Q Consensus 143 K~Yvi 147 (149)
-..++
T Consensus 122 ~l~~~ 126 (416)
T 1uij_A 122 MIWLA 126 (416)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 44443
No 68
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.29 E-value=4.8e-07 Score=73.43 Aligned_cols=58 Identities=16% Similarity=0.133 Sum_probs=46.5
Q ss_pred EecCCccc---cccCCCceEEEEEEeEEEEEE--------CCcce-----------EEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 82 WGCPPSKF---PWTFTATETMYLLEGKVIVYV--------DGREG-----------SFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 82 We~~pg~f---~~h~~~dE~~yVLEG~v~vt~--------dgg~~-----------~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
....||.. |+|...+|++|||+|++++.. +++ + .+.++|||++++|+|..|.|....
T Consensus 48 ~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~ 126 (239)
T 2xlg_A 48 AQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDEL-PVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPT 126 (239)
T ss_dssp EEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSC-CSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCS
T ss_pred EEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCc-ccccccccCceeEEEECCCCEEEECCCCCEEEEeCC
Confidence 34456643 345557999999999999999 443 1 789999999999999999999875
Q ss_pred c
Q 031987 140 A 140 (149)
Q Consensus 140 ~ 140 (149)
.
T Consensus 127 ~ 127 (239)
T 2xlg_A 127 D 127 (239)
T ss_dssp S
T ss_pred C
Confidence 4
No 69
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=98.28 E-value=2.4e-06 Score=61.20 Aligned_cols=58 Identities=17% Similarity=0.256 Sum_probs=52.9
Q ss_pred cCCccccccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCce
Q 031987 84 CPPSKFPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAV 141 (149)
Q Consensus 84 ~~pg~f~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~v 141 (149)
+.||++.......|+|.|++|++++...|..+-.+++|||.+.+|++....|++.+..
T Consensus 30 m~pGeytF~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~~~~ 87 (94)
T 2oyz_A 30 MLPGEYTFGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVKDAT 87 (94)
T ss_dssp ECSEEEEEEESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEESSCE
T ss_pred EeceEEEEcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEcccE
Confidence 4578887778899999999999999999886789999999999999999999999875
No 70
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.27 E-value=2.4e-06 Score=68.36 Aligned_cols=66 Identities=12% Similarity=0.205 Sum_probs=52.4
Q ss_pred eeeEecCCccc-c--ccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 79 WPKWGCPPSKF-P--WTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~f-~--~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
.-.-+-+||.. . .+...+|++|||||+++++++|. .+.++|||+++++++..|.|+...+-.-.|.
T Consensus 167 ~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~~~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 167 VSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKLEEN--YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp EEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEETTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred EEEEEECCCCccCcccCCCceEEEEEEECEEEEEECCE--EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 33455667764 2 33457899999999999999887 8999999999999999999999765444444
No 71
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.26 E-value=3.5e-06 Score=66.83 Aligned_cols=52 Identities=23% Similarity=0.436 Sum_probs=43.7
Q ss_pred ccccC-CCceEEEEEEeEEEEEECCc-ce--EEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 89 FPWTF-TATETMYLLEGKVIVYVDGR-EG--SFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 89 f~~h~-~~dE~~yVLEG~v~vt~dgg-~~--~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
+.||+ +.+|++||++|++.+.++|+ ++ .+.+++||++++|+|..|.+...+.
T Consensus 97 ~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~ 152 (191)
T 1vr3_A 97 FEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEK 152 (191)
T ss_dssp HSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTT
T ss_pred CcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCC
Confidence 46774 47999999999999999873 23 4589999999999999999988755
No 72
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.25 E-value=6.7e-06 Score=68.09 Aligned_cols=69 Identities=19% Similarity=0.238 Sum_probs=51.6
Q ss_pred eeeeEecCCccc---cccCCCceEEEEEEeEEEEEE--CCc-ceEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEEE
Q 031987 78 SWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYV--DGR-EGSFEIGTGDLVVFPKGMKITWDVIE--AVNKHYS 146 (149)
Q Consensus 78 ~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~--dgg-~~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Yv 146 (149)
........||.. +||...+|++||++|++++++ +++ ...+.+++||+++||+|..|.+.... +++-+.+
T Consensus 235 ~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~ 311 (361)
T 2vqa_A 235 TGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVV 311 (361)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred eEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEE
Confidence 345567778764 344445999999999999998 233 13799999999999999999999863 4544433
No 73
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.22 E-value=8.4e-06 Score=68.30 Aligned_cols=64 Identities=23% Similarity=0.390 Sum_probs=49.5
Q ss_pred ceeeeEecCCccc-cccC-CCceEEEEEEeEEEEEE---CCcceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 77 TSWPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYV---DGREGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 77 ~~~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~---dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
.....+...||.. +.|+ +.+|++||++|+++++. +|....+.+++||+++||+|..|.+...+.
T Consensus 79 ~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~ 147 (385)
T 1j58_A 79 LASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE 147 (385)
T ss_dssp CEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE
T ss_pred eEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC
Confidence 4456677788875 3343 38999999999999999 333114599999999999999999988753
No 74
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.22 E-value=2.6e-06 Score=64.95 Aligned_cols=53 Identities=13% Similarity=0.085 Sum_probs=44.1
Q ss_pred cccCCCceEEEEEEeEEEEEECCc------ceEEEEcCCcEEEEcCCcEEEEEEcCceE
Q 031987 90 PWTFTATETMYLLEGKVIVYVDGR------EGSFEIGTGDLVVFPKGMKITWDVIEAVN 142 (149)
Q Consensus 90 ~~h~~~dE~~yVLEG~v~vt~dgg------~~~~~i~aGD~v~~PkG~~~tW~v~e~vr 142 (149)
+.|-+.||+|+||+|++++...++ ...+.+++|+++++|+|..|+=...+..+
T Consensus 45 h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~ 103 (140)
T 3d0j_A 45 EIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTK 103 (140)
T ss_dssp EEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCE
T ss_pred ccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceE
Confidence 456679999999999999998843 23799999999999999999877665543
No 75
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.21 E-value=6.4e-06 Score=69.00 Aligned_cols=69 Identities=20% Similarity=0.203 Sum_probs=52.0
Q ss_pred eeeeEecCCccc---cccCCCceEEEEEEeEEEEEEC--Cc-ceEEEEcCCcEEEEcCCcEEEEEEc--CceEEEEE
Q 031987 78 SWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVD--GR-EGSFEIGTGDLVVFPKGMKITWDVI--EAVNKHYS 146 (149)
Q Consensus 78 ~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~d--gg-~~~~~i~aGD~v~~PkG~~~tW~v~--e~vrK~Yv 146 (149)
.....+..||.. ++|...+|++||++|+++++++ +| ++.+.+++||+++||+|..|.+... ++++-..+
T Consensus 258 ~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v 334 (385)
T 1j58_A 258 ASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEI 334 (385)
T ss_dssp EEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEE
T ss_pred EEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEE
Confidence 345567778764 3444448999999999999986 22 2589999999999999999999986 34554443
No 76
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.11 E-value=1.9e-06 Score=60.67 Aligned_cols=61 Identities=11% Similarity=0.205 Sum_probs=47.1
Q ss_pred eeEecCCccc-cccCCCce--EEEEEEeEEEEEECCcc-eEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 80 PKWGCPPSKF-PWTFTATE--TMYLLEGKVIVYVDGRE-GSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 80 giWe~~pg~f-~~h~~~dE--~~yVLEG~v~vt~dgg~-~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
-.|+-.||.. .||.+..| ++|+++|++++..+||. ....++|||++++|+|..|.......
T Consensus 20 ~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 20 TEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp EEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECSS
T ss_pred EEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECCC
Confidence 3477788875 58866544 44557999999998882 25689999999999999999998765
No 77
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.05 E-value=1.3e-06 Score=61.20 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=46.4
Q ss_pred eEecCCccc-ccc--CCCceEEEEEEeEEEEEECCcc-eEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 81 KWGCPPSKF-PWT--FTATETMYLLEGKVIVYVDGRE-GSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 81 iWe~~pg~f-~~h--~~~dE~~yVLEG~v~vt~dgg~-~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
.|.-.||.. .|| ....|+.||++|+++++.+|+. ....+++||++++|+|..|.......
T Consensus 21 r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 21 EWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp EEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECEECCC
Confidence 367778874 455 4467889999999999998862 23468999999999999999987754
No 78
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.01 E-value=1.4e-05 Score=65.30 Aligned_cols=68 Identities=16% Similarity=0.176 Sum_probs=54.0
Q ss_pred eeeEecCCccc-cc--cCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEEEec
Q 031987 79 WPKWGCPPSKF-PW--TFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE--AVNKHYSLE 148 (149)
Q Consensus 79 ~giWe~~pg~f-~~--h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Yvi~ 148 (149)
...-+-.||.. ++ +...+|.+|||||+++++++|. .+.++|||+++++.|..+.+.... +++..+..|
T Consensus 193 ~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~~~--~~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~d 265 (278)
T 1sq4_A 193 VNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQD--WVEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKD 265 (278)
T ss_dssp EEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEETTE--EEEEETTCEEEEEESCCEEEECCSSSCEEEEEEEE
T ss_pred EEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCCEEEEcCCCCCEEEEEEEE
Confidence 34566678774 33 3346799999999999999887 999999999999999999999864 466665553
No 79
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.01 E-value=9.1e-06 Score=68.78 Aligned_cols=60 Identities=18% Similarity=0.160 Sum_probs=49.9
Q ss_pred eeeeEecCCccc-cccC-CCceEEEEEEeEEEE-EECCcceEEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 78 SWPKWGCPPSKF-PWTF-TATETMYLLEGKVIV-YVDGREGSFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 78 ~~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~v-t~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
..+.....||.. +.|. ..+|++||++|++++ .++|. .+.+++||++++|+|..|.+....
T Consensus 101 ~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~g~--~~~l~~GD~~~iP~g~~H~~~n~~ 163 (354)
T 2d40_A 101 YAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVDGE--RTPMNEGDFILTPQWRWHDHGNPG 163 (354)
T ss_dssp EEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEETTE--EEECCTTCEEEECTTSCEEEECCS
T ss_pred EEEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEECCE--EEEEcCCCEEEECCCCcEEeEeCC
Confidence 456778888875 2332 578999999999999 77665 899999999999999999999864
No 80
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.00 E-value=2e-06 Score=67.22 Aligned_cols=52 Identities=13% Similarity=0.128 Sum_probs=41.3
Q ss_pred ccccC-CCceEEEEEEeEEEEEE--CCcceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 89 FPWTF-TATETMYLLEGKVIVYV--DGREGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 89 f~~h~-~~dE~~yVLEG~v~vt~--dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
++||+ +.+|++||++|++.+.+ +|..-.+.+++||++++|+|..|.+...+.
T Consensus 93 ~~~H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 93 LNEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp HSCBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSC
T ss_pred ccceECChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCCC
Confidence 46664 47999999999999987 443012569999999999999999887654
No 81
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=97.96 E-value=4e-05 Score=67.78 Aligned_cols=60 Identities=15% Similarity=0.315 Sum_probs=47.7
Q ss_pred eeeEecCCccc---cccCCCceEEEEEEeEEEEEECC--cceEEE--EcCCcEEEEcCCcEEEEEEc
Q 031987 79 WPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDG--REGSFE--IGTGDLVVFPKGMKITWDVI 138 (149)
Q Consensus 79 ~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dg--g~~~~~--i~aGD~v~~PkG~~~tW~v~ 138 (149)
...+...||.. |||...+|++|||+|++++.+.+ |...+. +++||+++||+|+.|.....
T Consensus 340 ~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng 406 (476)
T 1fxz_A 340 AEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQ 406 (476)
T ss_dssp EEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC
T ss_pred EEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeC
Confidence 45677788875 46666899999999999998854 223444 99999999999999987764
No 82
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.95 E-value=6.8e-06 Score=68.93 Aligned_cols=49 Identities=18% Similarity=0.374 Sum_probs=40.7
Q ss_pred ccccccC-CCceEEEEEEeEEEEEECCc--ceEEEEcCCcEEEEcCCcEEEE
Q 031987 87 SKFPWTF-TATETMYLLEGKVIVYVDGR--EGSFEIGTGDLVVFPKGMKITW 135 (149)
Q Consensus 87 g~f~~h~-~~dE~~yVLEG~v~vt~dgg--~~~~~i~aGD~v~~PkG~~~tW 135 (149)
.+++||+ +.||+||+++|++.+.+.++ -..+.+++||++++|+|+.|.=
T Consensus 42 ~R~d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~HsP 93 (286)
T 2qnk_A 42 TRKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSP 93 (286)
T ss_dssp CCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCEEE
T ss_pred cCccCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCCcCC
Confidence 3467775 48999999999999998764 1368999999999999998863
No 83
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.95 E-value=3.6e-05 Score=69.25 Aligned_cols=62 Identities=19% Similarity=0.308 Sum_probs=48.0
Q ss_pred hhcCCceeeeEecCCccc---cccCCCceEEEEEEeEEEEEECC--cce--EEEEcCCcEEEEcCCcEEE
Q 031987 72 SELGVTSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDG--REG--SFEIGTGDLVVFPKGMKIT 134 (149)
Q Consensus 72 ~~lGv~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dg--g~~--~~~i~aGD~v~~PkG~~~t 134 (149)
..+|. +.......||.. |||...+|++||++|++++++-+ |.. ..++++||+++||+|+.|.
T Consensus 390 ~~Lgi-S~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~ 458 (531)
T 3fz3_A 390 RFLRL-SAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVI 458 (531)
T ss_dssp HHHTC-EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEE
T ss_pred ccCce-eEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEE
Confidence 43443 356678888886 56677899999999999998844 212 4679999999999999994
No 84
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=97.94 E-value=3.2e-05 Score=68.69 Aligned_cols=60 Identities=20% Similarity=0.219 Sum_probs=46.6
Q ss_pred eeeEecCCccc---cccCCCceEEEEEEeEEEEEECCc--ceE--EEEcCCcEEEEcCCcEEEEEEc
Q 031987 79 WPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDGR--EGS--FEIGTGDLVVFPKGMKITWDVI 138 (149)
Q Consensus 79 ~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg--~~~--~~i~aGD~v~~PkG~~~tW~v~ 138 (149)
...+...||.. |||-..+|++|||+|++++.+.+. ... .++++||+++||+|..|.-...
T Consensus 369 ~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~ 435 (493)
T 2d5f_A 369 AQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGG 435 (493)
T ss_dssp EEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE
T ss_pred EEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeC
Confidence 45677778875 455567999999999999988653 133 3599999999999999886654
No 85
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=97.93 E-value=2.9e-05 Score=65.63 Aligned_cols=58 Identities=16% Similarity=0.202 Sum_probs=46.9
Q ss_pred eEecCCccc---cccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCce
Q 031987 81 KWGCPPSKF---PWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAV 141 (149)
Q Consensus 81 iWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~v 141 (149)
+-...||.. ++|.. .|++||++|+.+++++|. ++.+++||++++|+|..+..+..+++
T Consensus 272 ~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~~~--~~~~~~GD~~~vP~~~~H~~~n~e~~ 332 (354)
T 2d40_A 272 LQLLPKGFASRVARTTD-STIYHVVEGSGQVIIGNE--TFSFSAKDIFVVPTWHGVSFQTTQDS 332 (354)
T ss_dssp EEEECTTCBCCCBEESS-CEEEEEEEEEEEEEETTE--EEEEETTCEEEECTTCCEEEEEEEEE
T ss_pred EEEECCCCCCCceecCC-cEEEEEEeCeEEEEECCE--EEEEcCCCEEEECCCCeEEEEeCCCE
Confidence 445566654 34444 499999999999999765 89999999999999999999887664
No 86
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=97.91 E-value=5.7e-05 Score=67.56 Aligned_cols=60 Identities=15% Similarity=0.246 Sum_probs=47.3
Q ss_pred eeeEecCCccc---cccCCCceEEEEEEeEEEEEECCc--ceEEE--EcCCcEEEEcCCcEEEEEEc
Q 031987 79 WPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDGR--EGSFE--IGTGDLVVFPKGMKITWDVI 138 (149)
Q Consensus 79 ~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg--~~~~~--i~aGD~v~~PkG~~~tW~v~ 138 (149)
.......||.. |||...+|++|||+|++++.+.+. ...+. +++||+++||+|+.|.....
T Consensus 374 ~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng 440 (510)
T 3c3v_A 374 AEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQ 440 (510)
T ss_dssp EEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC
T ss_pred EEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeC
Confidence 45567778775 566678999999999999988542 23444 99999999999999987764
No 87
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=97.87 E-value=6.2e-05 Score=65.24 Aligned_cols=78 Identities=14% Similarity=0.123 Sum_probs=59.7
Q ss_pred hhhhcCCceeeeEecCCccc--cccCCCceEEEEEEeEEEEEE--CCcceEEEEcCCcE------EEEcCCcEEEEEEcC
Q 031987 70 KLSELGVTSWPKWGCPPSKF--PWTFTATETMYLLEGKVIVYV--DGREGSFEIGTGDL------VVFPKGMKITWDVIE 139 (149)
Q Consensus 70 ~L~~lGv~~~giWe~~pg~f--~~h~~~dE~~yVLEG~v~vt~--dgg~~~~~i~aGD~------v~~PkG~~~tW~v~e 139 (149)
.|.-+|..+...-+..|+.+ +++.+.+|++||++|++++.. .++..+..+++||+ ++||+|..|-+...+
T Consensus 45 ~l~~~~~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 45 RLQNLEDYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPD 124 (397)
T ss_dssp GGGGGTTCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECC
T ss_pred hhcccccEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCC
Confidence 44556656677788899987 344578999999999999987 23336889999999 999999999998765
Q ss_pred ---ceEEEEEe
Q 031987 140 ---AVNKHYSL 147 (149)
Q Consensus 140 ---~vrK~Yvi 147 (149)
+++-...+
T Consensus 125 ~~~~l~~i~~~ 135 (397)
T 2phl_A 125 PKEDLRIIQLA 135 (397)
T ss_dssp SSCCEEEEEEE
T ss_pred CCCCeEEEEee
Confidence 45544333
No 88
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=97.84 E-value=6.7e-05 Score=61.98 Aligned_cols=65 Identities=15% Similarity=0.263 Sum_probs=52.8
Q ss_pred eeEecCCccc-cc--cCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 80 PKWGCPPSKF-PW--TFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 80 giWe~~pg~f-~~--h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
-+..-+||.. +. |...+|..|||||++.+.++|. .+.++|||.++++++..+......+-.-.|.
T Consensus 189 ~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl 256 (266)
T 4e2q_A 189 HTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGDN--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYL 256 (266)
T ss_dssp EEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred EEEEECCCcCcCCceEcccceEEEEEeceEEEEECCE--EEEecCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 4567788876 33 3457799999999999999998 9999999999999999999998754443443
No 89
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=97.78 E-value=5.7e-05 Score=65.06 Aligned_cols=79 Identities=15% Similarity=0.054 Sum_probs=58.1
Q ss_pred EEEeeCCChhh-hhhcCCceeeeEecCCccc-ccc-CCCceEEEEEEeEEE-EEECCcceEEEEcCCcEEEEcCCcEEEE
Q 031987 60 VKIEKNPPQSK-LSELGVTSWPKWGCPPSKF-PWT-FTATETMYLLEGKVI-VYVDGREGSFEIGTGDLVVFPKGMKITW 135 (149)
Q Consensus 60 V~i~~~ps~~~-L~~lGv~~~giWe~~pg~f-~~h-~~~dE~~yVLEG~v~-vt~dgg~~~~~i~aGD~v~~PkG~~~tW 135 (149)
+.+=.||.-.. ..--....++++...||.. +.| ...+|++|||+|+.. +.++|. .+.+++||++++|.|..|..
T Consensus 85 ~~~l~nP~~~~~~~~t~~L~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vdG~--~~~~~~GD~v~iP~g~~H~~ 162 (368)
T 3nw4_A 85 ALGLANPGLGGNAYISPTMWAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNGD--PVRMSRGDLLLTPGWCFHGH 162 (368)
T ss_dssp EEECCCTTSTTCSCSSSSCEEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEETTE--EEEEETTCEEEECTTCCEEE
T ss_pred EEEEeCCCCCCcCccCCceEEEEEEECCCCccCceecccceEEEEEecceEEEEECCE--EEEEeCCCEEEECCCCcEEe
Confidence 33445665443 1112345578899999985 333 246799999999996 666666 99999999999999999999
Q ss_pred EEcCc
Q 031987 136 DVIEA 140 (149)
Q Consensus 136 ~v~e~ 140 (149)
.....
T Consensus 163 ~N~gd 167 (368)
T 3nw4_A 163 MNDTD 167 (368)
T ss_dssp EECSS
T ss_pred EeCCC
Confidence 99644
No 90
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=97.77 E-value=6.9e-05 Score=64.98 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=49.2
Q ss_pred eeeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEE-cC
Q 031987 78 SWPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDV-IE 139 (149)
Q Consensus 78 ~~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v-~e 139 (149)
..+.+...||.. +.|. ..+|++|||+|+..++..+| +.+.+++||++++|.|..|.... ..
T Consensus 124 ~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~G-~~~~~~~GD~i~~P~g~~H~~~N~~g 187 (394)
T 3bu7_A 124 FSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDG-HKVELGANDFVLTPNGTWHEHGILES 187 (394)
T ss_dssp EEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETT-EEEEECTTCEEEECTTCCEEEEECTT
T ss_pred EEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEECC-EEEEEcCCCEEEECcCCCEEEEcCCC
Confidence 457888999975 4442 45699999999998844444 59999999999999999999998 53
No 91
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.76 E-value=0.00012 Score=63.90 Aligned_cols=62 Identities=18% Similarity=0.252 Sum_probs=50.5
Q ss_pred eeeeEecCCccc--cccCCCceEEEEEEeEEEEEE--CCcceEEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 78 SWPKWGCPPSKF--PWTFTATETMYLLEGKVIVYV--DGREGSFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 78 ~~giWe~~pg~f--~~h~~~dE~~yVLEG~v~vt~--dgg~~~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
....-+.+|+.+ +.|.+.+|++||++|++.+.. .++.....+++||+++||+|..+-|...+
T Consensus 45 ~l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g 110 (418)
T 3s7i_A 45 RIVQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNRH 110 (418)
T ss_dssp EEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECC
T ss_pred EEEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEecC
Confidence 344567788887 456789999999999998887 23336889999999999999999999853
No 92
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=97.74 E-value=0.00014 Score=63.02 Aligned_cols=59 Identities=14% Similarity=0.080 Sum_probs=48.3
Q ss_pred eeeEecCCccc-ccc-CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 79 WPKWGCPPSKF-PWT-FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 79 ~giWe~~pg~f-~~h-~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
.+.-...||.. +.| ...+|++|||||+..+.++|. .+.+++||++++|+|..|......
T Consensus 296 ~~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V~ge--~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 296 ASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGK--RFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETTE--EEEECTTCEEEECTTCCEEEEECC
T ss_pred EEEEEECCCCcCCCcccCCcEEEEEEeCeEEEEECCE--EEEEeCCCEEEECCCCeEEeEeCC
Confidence 44556667765 333 347799999999999999877 999999999999999999998853
No 93
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=97.72 E-value=8.7e-05 Score=65.41 Aligned_cols=58 Identities=16% Similarity=0.295 Sum_probs=46.0
Q ss_pred eeEecCCccc---cccCCCceEEEEEEeEEEEEECC--cceEEE--EcCCcEEEEcCCcEEEEEE
Q 031987 80 PKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDG--REGSFE--IGTGDLVVFPKGMKITWDV 137 (149)
Q Consensus 80 giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dg--g~~~~~--i~aGD~v~~PkG~~~tW~v 137 (149)
..-...||.. |||...+|+.||++|++++++-+ |...+. +++||+++||+|+.|.=..
T Consensus 325 a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~n 389 (459)
T 2e9q_A 325 ERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRA 389 (459)
T ss_dssp EEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE
T ss_pred EEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEe
Confidence 4456678875 57777899999999999999864 324554 9999999999999986554
No 94
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=97.71 E-value=0.00011 Score=63.77 Aligned_cols=65 Identities=18% Similarity=0.190 Sum_probs=51.1
Q ss_pred eeeEecCCccc---cccCCCceEEEEEEeEEEEEECCc-------c---eEEEEcCCcEEEEcCCcEEEEEEcCceEE
Q 031987 79 WPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDGR-------E---GSFEIGTGDLVVFPKGMKITWDVIEAVNK 143 (149)
Q Consensus 79 ~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg-------~---~~~~i~aGD~v~~PkG~~~tW~v~e~vrK 143 (149)
...-...||.. |||...+|+.||++|+++++.-+. + -...+++||+++||+|+.|.+...+.+.-
T Consensus 241 ~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~~l~~ 318 (397)
T 2phl_A 241 ISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATSNVNF 318 (397)
T ss_dssp EEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESSSEEE
T ss_pred EEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCCCeEE
Confidence 34456678876 577789999999999999988532 1 14679999999999999999988875543
No 95
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=97.66 E-value=0.0001 Score=53.79 Aligned_cols=57 Identities=23% Similarity=0.408 Sum_probs=50.7
Q ss_pred CCccccccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCce
Q 031987 85 PPSKFPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAV 141 (149)
Q Consensus 85 ~pg~f~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~v 141 (149)
.||+|.......|+|-|++|++++...|..+-.++++||.+.+|++..-.-++.+..
T Consensus 44 ~PGeY~F~T~~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv~~~t 100 (106)
T 3eo6_A 44 HPGVYTLSSEVAETIRVLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEVMEPL 100 (106)
T ss_dssp CSEEEEECCSSCEEEEEEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEEEEEE
T ss_pred eeeEEEecCCCcEEEEEEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEECceE
Confidence 478888888899999999999999999975789999999999999999888887643
No 96
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=97.65 E-value=0.00071 Score=60.06 Aligned_cols=79 Identities=16% Similarity=0.106 Sum_probs=59.3
Q ss_pred hhhhhcCCceeeeEecCCcccc-cc-CCCceEEEEEEeEEEEEECC--c--------------------------ceEEE
Q 031987 69 SKLSELGVTSWPKWGCPPSKFP-WT-FTATETMYLLEGKVIVYVDG--R--------------------------EGSFE 118 (149)
Q Consensus 69 ~~L~~lGv~~~giWe~~pg~f~-~h-~~~dE~~yVLEG~v~vt~dg--g--------------------------~~~~~ 118 (149)
..|..+|+ ....-..+|+.+. -| .+.+|++||++|++.+.... + ...+.
T Consensus 38 ~~l~~~gv-~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~ 116 (493)
T 2d5f_A 38 PELQCAGV-TVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRH 116 (493)
T ss_dssp HHHHHHTC-EEEEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEESCEEE
T ss_pred hhhccCCE-EEEEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccceEEE
Confidence 45666774 3456788899873 33 45799999999999998762 0 02578
Q ss_pred EcCCcEEEEcCCcEEEEEEcC--ceEEEEEec
Q 031987 119 IGTGDLVVFPKGMKITWDVIE--AVNKHYSLE 148 (149)
Q Consensus 119 i~aGD~v~~PkG~~~tW~v~e--~vrK~Yvi~ 148 (149)
+++||+++||+|..+-|...+ +++-+.+++
T Consensus 117 l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d 148 (493)
T 2d5f_A 117 FNEGDVLVIPPGVPYWTYNTGDEPVVAISLLD 148 (493)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEEC
T ss_pred ecCCCEEEECCCCcEEEEeCCCCCEEEEEEec
Confidence 999999999999999999875 466655554
No 97
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=97.64 E-value=0.00039 Score=61.25 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=58.2
Q ss_pred hhhhhcCCceeeeEecCCcccc-cc-CCCceEEEEEEeEEEEEEC--Ccc----------------------eEEEEcCC
Q 031987 69 SKLSELGVTSWPKWGCPPSKFP-WT-FTATETMYLLEGKVIVYVD--GRE----------------------GSFEIGTG 122 (149)
Q Consensus 69 ~~L~~lGv~~~giWe~~pg~f~-~h-~~~dE~~yVLEG~v~vt~d--gg~----------------------~~~~i~aG 122 (149)
..|...|+. ...-..+|+.+. -| .+.+|++||++|++.+..- ++. ....+++|
T Consensus 56 ~~l~~~gvs-~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~G 134 (459)
T 2e9q_A 56 DEFQCAGVN-MIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREG 134 (459)
T ss_dssp HHHHHHTEE-EEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETT
T ss_pred hhhccCceE-EEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCC
Confidence 456666763 455677898863 23 3689999999999999885 321 14589999
Q ss_pred cEEEEcCCcEEEEEEcC--ceEEEEEec
Q 031987 123 DLVVFPKGMKITWDVIE--AVNKHYSLE 148 (149)
Q Consensus 123 D~v~~PkG~~~tW~v~e--~vrK~Yvi~ 148 (149)
|+++||+|..|-|...+ +++-+.+++
T Consensus 135 Dv~~iPaG~~H~~~N~g~~~l~~l~~~d 162 (459)
T 2e9q_A 135 DLLVVPAGVSHWMYNRGQSDLVLIVFAD 162 (459)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred CEEEECCCCCEEEEeCCCCCEEEEEEec
Confidence 99999999999999875 455555543
No 98
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=97.63 E-value=0.00015 Score=62.87 Aligned_cols=73 Identities=15% Similarity=0.235 Sum_probs=54.4
Q ss_pred hhhcCCceeeeEecCCccc---cccCCCceEEEEEEeEEEEEECCcc---------------eEE--EEcCCcEEEEcCC
Q 031987 71 LSELGVTSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDGRE---------------GSF--EIGTGDLVVFPKG 130 (149)
Q Consensus 71 L~~lGv~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg~---------------~~~--~i~aGD~v~~PkG 130 (149)
|..+|.. ...-...||.. |||....|+.||++|++++..-+.. ..+ .+++||+++||+|
T Consensus 244 L~~l~is-~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g 322 (416)
T 1uij_A 244 LRDLDIF-LSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAA 322 (416)
T ss_dssp HHHHTEE-EEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTT
T ss_pred chhcCcc-eEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCC
Confidence 4444532 34456678876 5777899999999999999764321 145 8999999999999
Q ss_pred cEEEEEEcCceEEE
Q 031987 131 MKITWDVIEAVNKH 144 (149)
Q Consensus 131 ~~~tW~v~e~vrK~ 144 (149)
+.|.....+.+.-.
T Consensus 323 ~~h~~~n~~~~~~l 336 (416)
T 1uij_A 323 YPFVVNATSNLNFL 336 (416)
T ss_dssp CCEEEEESSSEEEE
T ss_pred CeEEEEcCCCeEEE
Confidence 99999888765533
No 99
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=97.60 E-value=0.00072 Score=59.75 Aligned_cols=80 Identities=16% Similarity=0.173 Sum_probs=60.1
Q ss_pred hhhhhhcCCceeeeEecCCcccc--ccCCCceEEEEEEeEEEEEECC--cc-----------------------eEEEEc
Q 031987 68 QSKLSELGVTSWPKWGCPPSKFP--WTFTATETMYLLEGKVIVYVDG--RE-----------------------GSFEIG 120 (149)
Q Consensus 68 ~~~L~~lGv~~~giWe~~pg~f~--~h~~~dE~~yVLEG~v~vt~dg--g~-----------------------~~~~i~ 120 (149)
...|...|+. ...-..+|+.+. .+.+.+|++||++|++.+.... +. ....++
T Consensus 40 ~~~l~~~gvs-~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~ 118 (476)
T 1fxz_A 40 NKPFQCAGVA-LSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFR 118 (476)
T ss_dssp SHHHHHHTCE-EEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEEEEC
T ss_pred ChhhccCceE-EEEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEEEEe
Confidence 3456666764 445678898873 3346899999999999888753 10 257899
Q ss_pred CCcEEEEcCCcEEEEEEcC--ceEEEEEec
Q 031987 121 TGDLVVFPKGMKITWDVIE--AVNKHYSLE 148 (149)
Q Consensus 121 aGD~v~~PkG~~~tW~v~e--~vrK~Yvi~ 148 (149)
+||+++||+|..|-|...+ +++-+.+++
T Consensus 119 ~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d 148 (476)
T 1fxz_A 119 EGDLIAVPTGVAWWMYNNEDTPVVAVSIID 148 (476)
T ss_dssp TTEEEEECTTCEEEEEECSSSCEEEEEEEC
T ss_pred CCCEEEECCCCcEEEEeCCCCCEEEEEEec
Confidence 9999999999999999885 566666654
No 100
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=97.58 E-value=8.2e-05 Score=55.30 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=43.3
Q ss_pred eeEecCCcc-ccccCC-CceEEEEEEeEEEEEECCcceE--EEEcCCcEEEEcCCcEEE-EEEcCc
Q 031987 80 PKWGCPPSK-FPWTFT-ATETMYLLEGKVIVYVDGREGS--FEIGTGDLVVFPKGMKIT-WDVIEA 140 (149)
Q Consensus 80 giWe~~pg~-f~~h~~-~dE~~yVLEG~v~vt~dgg~~~--~~i~aGD~v~~PkG~~~t-W~v~e~ 140 (149)
-..+..||. ++.|.+ .+|.+|||+|+++...++. . ..+++||.++.|+|..|+ ....+.
T Consensus 47 ~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~~g~~--~~~~~~~~Gd~~~~p~g~~H~p~~~~e~ 110 (145)
T 2o1q_A 47 AIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRGGKA--AGGDTAIAPGYGYESANARHDKTEFPVA 110 (145)
T ss_dssp EEEEECTTEEECCEEESSCEEEEEEEEEEEETTCGG--GTSEEEESSEEEEECTTCEESCCEEEEE
T ss_pred EEEEECCCCCCCccCCCCCEEEEEEEeEEEEcCCCE--ecceEeCCCEEEEECcCCccCCeECCCC
Confidence 345666775 355543 5677999999999654333 4 899999999999999999 554444
No 101
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=97.58 E-value=0.00022 Score=63.08 Aligned_cols=63 Identities=24% Similarity=0.389 Sum_probs=46.5
Q ss_pred hhhcCCceeeeEecCCccc---cccCCCceEEEEEEeEEEEEECC--cceEE--EEcCCcEEEEcCCcEEE
Q 031987 71 LSELGVTSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDG--REGSF--EIGTGDLVVFPKGMKIT 134 (149)
Q Consensus 71 L~~lGv~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dg--g~~~~--~i~aGD~v~~PkG~~~t 134 (149)
|..+|.. ...-...||.. |||...+|+.||++|++.+.+-+ +...+ ++++||+++||+|+.|.
T Consensus 318 L~~lgiS-~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h~ 387 (465)
T 3qac_A 318 LRHLRLS-AAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAIV 387 (465)
T ss_dssp HHHHTCE-EEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEE
T ss_pred cccccee-EEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEEE
Confidence 3444543 34456678775 57888999999999999988743 32344 48999999999999864
No 102
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=97.51 E-value=0.00053 Score=59.06 Aligned_cols=62 Identities=13% Similarity=0.158 Sum_probs=52.0
Q ss_pred eeeEecCCcccc-cc-CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceE
Q 031987 79 WPKWGCPPSKFP-WT-FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVN 142 (149)
Q Consensus 79 ~giWe~~pg~f~-~h-~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vr 142 (149)
+.++...||.-. .| ....+++||+||+..++++|. .+..++||+|++|.|..++....++..
T Consensus 281 ~~~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I~~~--~~~w~~gD~fvvP~w~~h~~~n~~~a~ 344 (368)
T 3nw4_A 281 CEFHRLRAGTETATRNEVGSTVFQVFEGAGAVVMNGE--TTKLEKGDMFVVPSWVPWSLQAETQFD 344 (368)
T ss_dssp EEEEEECTTCBCCCEEESSCEEEEEEESCEEEEETTE--EEEECTTCEEEECTTCCEEEEESSSEE
T ss_pred hheEEECCCCccCCeeccccEEEEEEeCcEEEEECCE--EEEecCCCEEEECCCCcEEEEeCCCEE
Confidence 556777777652 23 346799999999999999887 899999999999999999999887654
No 103
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=97.51 E-value=0.00018 Score=64.18 Aligned_cols=55 Identities=16% Similarity=0.346 Sum_probs=43.3
Q ss_pred eeEecCCccc---cccCCCceEEEEEEeEEEEEECC--cceEE--EEcCCcEEEEcCCcEEE
Q 031987 80 PKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDG--REGSF--EIGTGDLVVFPKGMKIT 134 (149)
Q Consensus 80 giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dg--g~~~~--~i~aGD~v~~PkG~~~t 134 (149)
..-...||.. |||...+|+.||++|++++++=+ +...+ ++++||+++||+|+.|.
T Consensus 361 a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~ 422 (496)
T 3ksc_A 361 EHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVA 422 (496)
T ss_dssp EEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEE
T ss_pred EEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEE
Confidence 3455667775 57778999999999999998743 32344 49999999999999984
No 104
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=97.50 E-value=0.00057 Score=60.52 Aligned_cols=87 Identities=16% Similarity=0.223 Sum_probs=61.1
Q ss_pred eEEEeeCCChhhhhhcCCceeeeEecCCccc---cccCCCceEEEEEEeEEEEEE--CCcce------------------
Q 031987 59 GVKIEKNPPQSKLSELGVTSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYV--DGREG------------------ 115 (149)
Q Consensus 59 ~V~i~~~ps~~~L~~lGv~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~--dgg~~------------------ 115 (149)
.+.++.. ....|...|+.- ..-..+|+.+ ++| +.+|++||++|+..+.. .|+.+
T Consensus 34 ~~e~~d~-~~~~l~~~gvs~-~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~ 110 (465)
T 3qac_A 34 LTEVWDS-NEQEFRCAGVSV-IRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIR 110 (465)
T ss_dssp EEEECCT-TSHHHHHHTCEE-EEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC----------------
T ss_pred EEEEECC-CChhhcccceEE-EEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhccccccccccc
Confidence 4555543 233566667653 4456788876 345 89999999999998874 23212
Q ss_pred --------------------EEEEcCCcEEEEcCCcEEEEEEc--CceEEEEEec
Q 031987 116 --------------------SFEIGTGDLVVFPKGMKITWDVI--EAVNKHYSLE 148 (149)
Q Consensus 116 --------------------~~~i~aGD~v~~PkG~~~tW~v~--e~vrK~Yvi~ 148 (149)
...+++||+++||+|..|-|... +++.-+.+++
T Consensus 111 ~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d 165 (465)
T 3qac_A 111 EQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILID 165 (465)
T ss_dssp --------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEC
T ss_pred cccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEc
Confidence 34899999999999999999886 4566666654
No 105
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.48 E-value=0.00057 Score=60.51 Aligned_cols=64 Identities=19% Similarity=0.391 Sum_probs=47.1
Q ss_pred hhcCCceeeeEecCCccc---cccCCCceEEEEEEeEEEEEECC--cceEE--EEcCCcEEEEcCCcEEEEE
Q 031987 72 SELGVTSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDG--REGSF--EIGTGDLVVFPKGMKITWD 136 (149)
Q Consensus 72 ~~lGv~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dg--g~~~~--~i~aGD~v~~PkG~~~tW~ 136 (149)
..+|.. ...-...||.. |||...+|+.||++|+++++.-+ +...+ ++++||+++||+|+.|.--
T Consensus 319 ~~lgiS-~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~ 389 (466)
T 3kgl_A 319 RFLRLS-ALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKR 389 (466)
T ss_dssp HHHTCE-EEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEE
T ss_pred ccCcee-eEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEEE
Confidence 434433 34456677775 57778999999999999998743 31333 4999999999999999653
No 106
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=97.47 E-value=0.00028 Score=61.53 Aligned_cols=72 Identities=18% Similarity=0.281 Sum_probs=53.2
Q ss_pred hhhcCCceeeeEecCCccc---cccCCCceEEEEEEeEEEEEECCcc------------e--EE--EEcCCcEEEEcCCc
Q 031987 71 LSELGVTSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDGRE------------G--SF--EIGTGDLVVFPKGM 131 (149)
Q Consensus 71 L~~lGv~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg~------------~--~~--~i~aGD~v~~PkG~ 131 (149)
|..+|.. ...-...||.. |||....|+.||++|+++++.-+.. . .+ ++++||+++||+|+
T Consensus 261 L~~l~is-~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~ 339 (434)
T 2ea7_A 261 LKDLDVF-ISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAY 339 (434)
T ss_dssp HHHHTEE-EEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTC
T ss_pred ccccCcc-eEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCC
Confidence 4455533 33456677775 5777899999999999999775431 1 45 79999999999999
Q ss_pred EEEEEEcCceEE
Q 031987 132 KITWDVIEAVNK 143 (149)
Q Consensus 132 ~~tW~v~e~vrK 143 (149)
.|.-...+.+.-
T Consensus 340 ~h~~~n~~~~~~ 351 (434)
T 2ea7_A 340 PVAINATSNLNF 351 (434)
T ss_dssp CEEEEESSSEEE
T ss_pred eEEEEcCCCeEE
Confidence 998887766443
No 107
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=97.45 E-value=0.00053 Score=50.35 Aligned_cols=58 Identities=16% Similarity=0.235 Sum_probs=51.1
Q ss_pred CCcc--ccccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceE
Q 031987 85 PPSK--FPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVN 142 (149)
Q Consensus 85 ~pg~--f~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vr 142 (149)
.||+ +.......|.|-|++|++++...|..+-.++++|+.+.+|++..-.-++.+...
T Consensus 45 ~PGe~~YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv~~~~~ 104 (111)
T 3hqx_A 45 LPTEQPLTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIETDEVLD 104 (111)
T ss_dssp CCCSSCEEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEECSSCEE
T ss_pred eccccceEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEECccee
Confidence 4677 777778999999999999999999767899999999999999999999887643
No 108
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=97.34 E-value=0.0022 Score=57.15 Aligned_cols=81 Identities=14% Similarity=0.189 Sum_probs=57.8
Q ss_pred ChhhhhhcCCceeeeEecCCccc--cccCCCceEEEEEEeEEEEEE--CCcce----------------------EEEEc
Q 031987 67 PQSKLSELGVTSWPKWGCPPSKF--PWTFTATETMYLLEGKVIVYV--DGREG----------------------SFEIG 120 (149)
Q Consensus 67 s~~~L~~lGv~~~giWe~~pg~f--~~h~~~dE~~yVLEG~v~vt~--dgg~~----------------------~~~i~ 120 (149)
....|..+|+.- ..-...|+.+ +.+....|++||++|++.+.. .+..+ ...++
T Consensus 37 ~~~~L~~~gvs~-~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~ 115 (496)
T 3ksc_A 37 NNKQFRCAGVAL-SRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFR 115 (496)
T ss_dssp TSHHHHHHTCEE-EEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEEC
T ss_pred cchhhccCCceE-EEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccC
Confidence 334677778753 4456688876 222379999999999998877 22112 24899
Q ss_pred CCcEEEEcCCcEEEEEEcC--ceEEEEEec
Q 031987 121 TGDLVVFPKGMKITWDVIE--AVNKHYSLE 148 (149)
Q Consensus 121 aGD~v~~PkG~~~tW~v~e--~vrK~Yvi~ 148 (149)
+||+++||+|..+-|.... ++.-+.+++
T Consensus 116 ~GDV~viPaG~~h~~~N~G~~~lv~v~~~d 145 (496)
T 3ksc_A 116 EGDIIAVPTGIVFWMYNDQDTPVIAVSLTD 145 (496)
T ss_dssp TTEEEEECTTCEEEEEECSSSCEEEEEEEC
T ss_pred CCCEEEECCCCcEEEEcCCCCCEEEEEEec
Confidence 9999999999999988875 455555554
No 109
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=97.29 E-value=0.0036 Score=55.93 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=59.8
Q ss_pred CChhhhhhcCCceeeeEecCCcccc-cc-CCCceEEEEEEeEEEEEECCcc-----------------------------
Q 031987 66 PPQSKLSELGVTSWPKWGCPPSKFP-WT-FTATETMYLLEGKVIVYVDGRE----------------------------- 114 (149)
Q Consensus 66 ps~~~L~~lGv~~~giWe~~pg~f~-~h-~~~dE~~yVLEG~v~vt~dgg~----------------------------- 114 (149)
+....|.-.|+. .-.-..+|+.+. -| .+..|++||++|+..+....-+
T Consensus 38 ~~~~~l~~~gvs-~~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (510)
T 3c3v_A 38 PNNQEFECAGVA-LSRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQ 116 (510)
T ss_dssp TTSHHHHHHTCE-EEEEEECTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC------------------
T ss_pred CCCcccccCcEE-EEEEEECCCCCccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccccc
Confidence 334456666765 345677888873 33 4689999999999998875410
Q ss_pred ---------eEEEEcCCcEEEEcCCcEEEEEEcC--ceEEEEEec
Q 031987 115 ---------GSFEIGTGDLVVFPKGMKITWDVIE--AVNKHYSLE 148 (149)
Q Consensus 115 ---------~~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Yvi~ 148 (149)
....+++||+++||+|..+-|...+ +++-+.+++
T Consensus 117 ~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d 161 (510)
T 3c3v_A 117 SQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTD 161 (510)
T ss_dssp --CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEEC
T ss_pred ccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeC
Confidence 0268999999999999999998885 466666654
No 110
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.18 E-value=0.00089 Score=52.13 Aligned_cols=55 Identities=16% Similarity=0.103 Sum_probs=43.0
Q ss_pred ceeeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEE
Q 031987 77 TSWPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDV 137 (149)
Q Consensus 77 ~~~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v 137 (149)
...-.....||.. +.|. +..|+.|||+|++. |+ ...+++||.+++|.|..|+..+
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~----de--~~~~~~Gd~~~~p~g~~H~p~a 181 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR----DE--TDRFGAGDIEIADQELEHTPVA 181 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE----CS--SSEEETTCEEEECSSCCCCCEE
T ss_pred cEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE----CC--cEEECCCeEEEeCcCCccCCEe
Confidence 3445677777764 5553 58899999999966 33 3589999999999999999888
No 111
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.11 E-value=0.00072 Score=51.92 Aligned_cols=63 Identities=17% Similarity=0.220 Sum_probs=47.1
Q ss_pred eEecCCcc-ccccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC----ceEEEEE
Q 031987 81 KWGCPPSK-FPWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE----AVNKHYS 146 (149)
Q Consensus 81 iWe~~pg~-f~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e----~vrK~Yv 146 (149)
..+..||. ++.|. ...|..|||+|++... +++ ...+++||.++.|+|..|+..+.+ ....+|+
T Consensus 47 lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~-~~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v 115 (165)
T 3cjx_A 47 RASFAPGLTLPLHFHTGTVHMYTISGCWYYT-EYP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIFM 115 (165)
T ss_dssp EEEECTTCBCCEEEESSCEEEEEEESEEEET-TCT--TSCEETTEEEEECTTCEECEECCTTCSSCEEEEEE
T ss_pred EEEECCCCcCCcccCCCCEEEEEEEEEEEEC-CCc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEEE
Confidence 45555664 46664 4789999999999873 222 478999999999999999999876 4445553
No 112
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=97.11 E-value=0.0012 Score=57.89 Aligned_cols=69 Identities=19% Similarity=0.284 Sum_probs=50.8
Q ss_pred hhhcCCceeeeEecCCccc---cccCCCceEEEEEEeEEEEEECCcc----------e----EEEEcCCcEEEEcCCcEE
Q 031987 71 LSELGVTSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDGRE----------G----SFEIGTGDLVVFPKGMKI 133 (149)
Q Consensus 71 L~~lGv~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg~----------~----~~~i~aGD~v~~PkG~~~ 133 (149)
|..+|.. ...-...||.. |||...+|+.||++|++++..-+.. . ..++++||+++||+|+.|
T Consensus 276 L~~l~is-~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h 354 (445)
T 2cav_A 276 LRDLDIL-LNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPV 354 (445)
T ss_dssp HHHHTEE-EEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCE
T ss_pred cccCCCc-eEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEE
Confidence 4444543 44556778876 5777899999999999988874321 2 445999999999999998
Q ss_pred EEEEcCc
Q 031987 134 TWDVIEA 140 (149)
Q Consensus 134 tW~v~e~ 140 (149)
.-...+.
T Consensus 355 ~~~n~~~ 361 (445)
T 2cav_A 355 ALKAASD 361 (445)
T ss_dssp EEEESSS
T ss_pred EEEcCCC
Confidence 7766654
No 113
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.01 E-value=0.0017 Score=54.39 Aligned_cols=61 Identities=15% Similarity=0.229 Sum_probs=50.1
Q ss_pred cCCcccccc-CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 84 CPPSKFPWT-FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 84 ~~pg~f~~h-~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
.++|+.... ...|=.+++|||+..|+.+|. ++.+++||++.||+|..++|...+.-+-.++
T Consensus 214 ~G~Ges~~~~~~~d~wiWqLEGss~Vt~~~q--~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I 275 (286)
T 2qnk_A 214 YGQGSSEGLRQNVDVWLWQLEGSSVVTMGGR--RLSLAPDDSLLVLAGTSYAWERTQGSVALSV 275 (286)
T ss_dssp ECSEEEEECCCSSCEEEEEEESCEEEEETTE--EEEECTTEEEEECTTCCEEEEECTTCEEEEE
T ss_pred EcCCccccccCcCcEEEEEEcCceEEEECCe--EEeccCCCEEEecCCCeEEEEecCCeEEEEE
Confidence 445554322 234889999999999999998 9999999999999999999999877766665
No 114
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=96.98 E-value=0.0017 Score=50.78 Aligned_cols=56 Identities=25% Similarity=0.328 Sum_probs=44.4
Q ss_pred EecCCccc-c--ccCC------CceEEEEEEeEEEEEECCcc-------------------eEEEEcCCcEEEEcCCcEE
Q 031987 82 WGCPPSKF-P--WTFT------ATETMYLLEGKVIVYVDGRE-------------------GSFEIGTGDLVVFPKGMKI 133 (149)
Q Consensus 82 We~~pg~f-~--~h~~------~dE~~yVLEG~v~vt~dgg~-------------------~~~~i~aGD~v~~PkG~~~ 133 (149)
....||.. + .|.. .+|.++++.|.+++..+|+. ..+.++|||.+.+|+|..|
T Consensus 58 l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H 137 (175)
T 2y0o_A 58 LVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKH 137 (175)
T ss_dssp EEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCE
T ss_pred EEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcE
Confidence 44556654 3 4445 66999999999999998751 2369999999999999999
Q ss_pred EEEE
Q 031987 134 TWDV 137 (149)
Q Consensus 134 tW~v 137 (149)
.|..
T Consensus 138 ~f~a 141 (175)
T 2y0o_A 138 WFQA 141 (175)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9987
No 115
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=96.96 E-value=0.002 Score=56.12 Aligned_cols=71 Identities=11% Similarity=0.176 Sum_probs=51.3
Q ss_pred hhhcCCceeeeEecCCccc---cccCCCceEEEEEEeEEEEEECC--cc--------------------------eEEEE
Q 031987 71 LSELGVTSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYVDG--RE--------------------------GSFEI 119 (149)
Q Consensus 71 L~~lGv~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~dg--g~--------------------------~~~~i 119 (149)
|..+|+. ...-...|+.. +||....|+.||++|++.+..-+ +. -...+
T Consensus 258 L~~~gis-~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 336 (418)
T 3s7i_A 258 LQDLDMM-LTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARL 336 (418)
T ss_dssp HHHHTCE-EEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEE
T ss_pred hccCCee-EEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeee
Confidence 4444543 34456677775 46667899999999999886532 20 13568
Q ss_pred cCCcEEEEcCCcEEEEEEcCceE
Q 031987 120 GTGDLVVFPKGMKITWDVIEAVN 142 (149)
Q Consensus 120 ~aGD~v~~PkG~~~tW~v~e~vr 142 (149)
++||+++||+|..+.+...+++.
T Consensus 337 ~~GDV~vvP~G~~~~~~~~~~l~ 359 (418)
T 3s7i_A 337 KEGDVFIMPAAHPVAINASSELH 359 (418)
T ss_dssp CTTCEEEECTTCCEEEEESSCEE
T ss_pred CCCCEEEECCCCEEEEECCCCEE
Confidence 99999999999999888776643
No 116
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=96.92 E-value=0.0079 Score=53.21 Aligned_cols=87 Identities=14% Similarity=0.131 Sum_probs=59.7
Q ss_pred EEEeeCCChhhhhhcCCceeeeEecCCcccc--ccCCCceEEEEEEeEEEEEEC--Ccce--------------------
Q 031987 60 VKIEKNPPQSKLSELGVTSWPKWGCPPSKFP--WTFTATETMYLLEGKVIVYVD--GREG-------------------- 115 (149)
Q Consensus 60 V~i~~~ps~~~L~~lGv~~~giWe~~pg~f~--~h~~~dE~~yVLEG~v~vt~d--gg~~-------------------- 115 (149)
+.++. +....|..+|+. ...-+..|+.+. .+.+..|++||++|++.+..- |..+
T Consensus 28 ~e~w~-~~~~~L~~~gvs-~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~ 105 (466)
T 3kgl_A 28 IEVWD-HHAPQLRCSGVS-FVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQ 105 (466)
T ss_dssp EEECC-TTSHHHHHHTEE-EEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC--------
T ss_pred EEEEC-CCChhhccCCeE-EEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhccccccccccccccccc
Confidence 33443 334567667764 456788888872 334699999999999987642 1111
Q ss_pred ----------------------------------------EEEEcCCcEEEEcCCcEEEEEEcC--ceEEEEEec
Q 031987 116 ----------------------------------------SFEIGTGDLVVFPKGMKITWDVIE--AVNKHYSLE 148 (149)
Q Consensus 116 ----------------------------------------~~~i~aGD~v~~PkG~~~tW~v~e--~vrK~Yvi~ 148 (149)
...+++||+++||+|+.+-|...+ +++-...++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d 180 (466)
T 3kgl_A 106 GQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLD 180 (466)
T ss_dssp ---------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEc
Confidence 148999999999999999998874 455555543
No 117
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=96.92 E-value=0.0014 Score=49.88 Aligned_cols=56 Identities=16% Similarity=0.127 Sum_probs=43.5
Q ss_pred eeeEecCCccc-cccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc
Q 031987 79 WPKWGCPPSKF-PWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI 138 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~ 138 (149)
.-..+..||.. +.|. ...|..|||+|+..+. +. ...+.+||.++.|+|..|+..+.
T Consensus 44 v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~--e~--~~~~~~Gd~~~~P~g~~H~~~~~ 101 (159)
T 3ebr_A 44 ITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYK--EH--DWVAHAGSVVYETASTRHTPQSA 101 (159)
T ss_dssp EEEEEECSSCBCCCEEESSCEEEEEEESCEEET--TS--SCCBCTTCEEEECSSEEECEEES
T ss_pred EEEEEECCCCCcccccCCCCEEEEEEEeEEEEe--CC--CeEECCCeEEEECCCCcceeEeC
Confidence 34566677754 5554 3688899999998874 23 25899999999999999999887
No 118
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=96.87 E-value=0.0015 Score=51.43 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=44.9
Q ss_pred cccccC-CCceEEEEEEeEEEEEECCcce-EEEEcCCcEEEEcCCcEEEEEEc----CceEEEE
Q 031987 88 KFPWTF-TATETMYLLEGKVIVYVDGREG-SFEIGTGDLVVFPKGMKITWDVI----EAVNKHY 145 (149)
Q Consensus 88 ~f~~h~-~~dE~~yVLEG~v~vt~dgg~~-~~~i~aGD~v~~PkG~~~tW~v~----e~vrK~Y 145 (149)
.|..|+ +.-|++||++|+++ .++++.. .+.+.+||++++|+|..+.|... ++.+-.+
T Consensus 21 ~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~~~ 83 (276)
T 3gbg_A 21 IFNNLYINDYKMFWIDSGIAK-LIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSV 83 (276)
T ss_dssp EEEEEECSSCEEEEESSSCEE-EEETTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEEEE
T ss_pred hccHhhhcceEEEEEecCceE-EECCccceeEEEcCCCEEEEcCCCceeeccccCCCcceEEEE
Confidence 344454 57899999999999 8765312 89999999999999999999987 6655443
No 119
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=96.77 E-value=0.0027 Score=56.44 Aligned_cols=66 Identities=18% Similarity=0.347 Sum_probs=54.2
Q ss_pred eeeEecCCcc---ccccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceEEEEEe
Q 031987 79 WPKWGCPPSK---FPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVNKHYSL 147 (149)
Q Consensus 79 ~giWe~~pg~---f~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~Yvi 147 (149)
..+|.+..+- +-...+.||++++-+|++.|..+=| ...+++||.++||+|++.+++..++. .-|++
T Consensus 159 I~~y~~n~sM~~~~f~NaDGD~Livpq~G~l~i~TEfG--~L~v~pgei~VIPRGi~frv~l~~p~-Rgyi~ 227 (471)
T 1eyb_A 159 IHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFG--KMLVQPNEICVIQRGMRFSIDVFEET-RGYIL 227 (471)
T ss_dssp EEEEEECSCCCSEEEEESSEEEEEEEEESCEEEEETTE--EEEECTTEEEEECTTCCEEEECSSSE-EEEEE
T ss_pred EEEEeCCCCcccceeecCCCCEEEEEEeCCEEEEEecc--cEEeccCCEEEECCccEEEEeeCCCc-eEEEE
Confidence 4568887653 2234689999999999999999999 89999999999999999999998744 44554
No 120
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=96.60 E-value=0.0051 Score=50.08 Aligned_cols=64 Identities=17% Similarity=0.256 Sum_probs=48.1
Q ss_pred eEecCCccc---cccCCCceEEEEEEeEEEEEE---CCcceEEEEcC-C---cEEEEcCCcEEEEEEcC--ceEEEE
Q 031987 81 KWGCPPSKF---PWTFTATETMYLLEGKVIVYV---DGREGSFEIGT-G---DLVVFPKGMKITWDVIE--AVNKHY 145 (149)
Q Consensus 81 iWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~---dgg~~~~~i~a-G---D~v~~PkG~~~tW~v~e--~vrK~Y 145 (149)
.-...||.. +||....|.++|++|++.+.. ..+ +.+++.. | |.+++|+|+.|...... ++.-.|
T Consensus 276 ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~ 351 (369)
T 3st7_A 276 VNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDD-EIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIM 351 (369)
T ss_dssp EEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCC-CCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEE
T ss_pred EEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCC-cEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEE
Confidence 344556654 456678999999999999953 233 5788888 8 99999999999999975 344444
No 121
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=96.39 E-value=0.013 Score=46.66 Aligned_cols=56 Identities=16% Similarity=0.086 Sum_probs=43.7
Q ss_pred eeeEecCCcc-ccccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 79 WPKWGCPPSK-FPWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 79 ~giWe~~pg~-f~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
.-..+.+||. ++.|. +..|.+|||+|++. + ++ ..+.|||.++.|+|..|+..+.+.
T Consensus 45 ~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~--d-~~---~~~~~Gd~~~~P~g~~H~p~a~~g 102 (223)
T 3o14_A 45 TSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--D-EH---GDYPAGTYVRNPPTTSHVPGSAEG 102 (223)
T ss_dssp EEEEEECTTEECCCEECTTCEEEEEEEEEEE--E-TT---EEEETTEEEEECTTCEECCEESSC
T ss_pred EEEEEECCCCCcccccCCCCEEEEEEEeEEE--E-CC---eEECCCeEEEeCCCCccccEeCCC
Confidence 3456667775 46664 48999999999976 2 23 589999999999999999887655
No 122
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=95.73 E-value=0.01 Score=45.29 Aligned_cols=61 Identities=16% Similarity=0.153 Sum_probs=43.4
Q ss_pred eeEecCCcc-ccccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEE-EEEcCc
Q 031987 80 PKWGCPPSK-FPWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKIT-WDVIEA 140 (149)
Q Consensus 80 giWe~~pg~-f~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~t-W~v~e~ 140 (149)
-+-+..||. |+.|+ +..|.+|||||+......+......++||+.++-|+|..|+ |...+.
T Consensus 49 ~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~~~~~aGsYv~ePpGs~H~p~~~~~~ 112 (153)
T 3bal_A 49 AIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRGGEQEGGSTAYAPSYGFESSGALHGKTFFPVE 112 (153)
T ss_dssp EEEEECTTEEECCEEESSCEEEEEEESEEEETTCGGGTSEEEESSEEEEECTTCEESCCEESSC
T ss_pred EEEEeCCCCCccCccCCCCEEEEEEEEEEEecCccccCccccCCCeEEEcCCCCcccceeCCCC
Confidence 345666775 56664 57888999999997743332014788999999999999998 444443
No 123
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=95.39 E-value=0.071 Score=45.85 Aligned_cols=57 Identities=7% Similarity=0.106 Sum_probs=40.8
Q ss_pred eeEecCCccccccCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCc-EEEEEEc
Q 031987 80 PKWGCPPSKFPWTFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGM-KITWDVI 138 (149)
Q Consensus 80 giWe~~pg~f~~h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~-~~tW~v~ 138 (149)
-.|+..++......+.-.++.+++|++++..+++ ...+++||++++|++. ..+.+-.
T Consensus 327 ~~~~l~~~~~~~~~~~~~il~v~~G~~~l~~~~~--~~~l~~G~~~fvpa~~~~~~i~g~ 384 (394)
T 2wfp_A 327 SLHDLALQETSIGQHSAAILFCVEGEAVLRKDEQ--RLVLKPGESAFIGADESPVNASGT 384 (394)
T ss_dssp EEEECCSSCEEECCSSCEEEEEEEEEEEEEETTE--EEEECTTCEEEECGGGCCEEEEEE
T ss_pred EEEEEcCCeEEecCCCcEEEEEEeceEEEEECCe--EEEEccCcEEEEeCCCceEEEEee
Confidence 3354444433333445689999999999998765 7899999999999984 4444433
No 124
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.93 E-value=0.2 Score=41.39 Aligned_cols=66 Identities=12% Similarity=0.085 Sum_probs=51.2
Q ss_pred eeeEecCCccc-cccCCCceEEEE-EEeEEEEEECCcceEEEE-cC---------CcEEEEcCCcEEEEEEcCceEEEEE
Q 031987 79 WPKWGCPPSKF-PWTFTATETMYL-LEGKVIVYVDGREGSFEI-GT---------GDLVVFPKGMKITWDVIEAVNKHYS 146 (149)
Q Consensus 79 ~giWe~~pg~f-~~h~~~dE~~yV-LEG~v~vt~dgg~~~~~i-~a---------GD~v~~PkG~~~tW~v~e~vrK~Yv 146 (149)
.++++.++|.- .......|++.| |.|.++|+.+|. .+.. +. .|++++|+|...+.+...+ -++|+
T Consensus 31 f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~~g~--~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~-~~~~v 107 (270)
T 2qjv_A 31 FDVWQLXAGESITLPSDERERCLVLVAGLASVXAADS--FFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETD-LELAV 107 (270)
T ss_dssp EEEEEECTTCEEEECCSSEEEEEEEEESCEEEEETTE--EEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSS-EEEEE
T ss_pred EEEEEecCCCEEEecCCCcEEEEEEecceEEEEECCE--EEeccccccccccCCCCcEEEECCCCEEEEEecCC-ceEEE
Confidence 66788888874 455677788776 899999999987 6655 33 4999999999999998877 55665
Q ss_pred e
Q 031987 147 L 147 (149)
Q Consensus 147 i 147 (149)
.
T Consensus 108 ~ 108 (270)
T 2qjv_A 108 C 108 (270)
T ss_dssp E
T ss_pred E
Confidence 3
No 125
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=94.47 E-value=0.12 Score=38.67 Aligned_cols=56 Identities=7% Similarity=-0.009 Sum_probs=42.3
Q ss_pred CCccc---cccCCCceEEEEEEeEEEEEECCcc--eEEEEcCCc-EEEEcCCcEEEEEEcCc
Q 031987 85 PPSKF---PWTFTATETMYLLEGKVIVYVDGRE--GSFEIGTGD-LVVFPKGMKITWDVIEA 140 (149)
Q Consensus 85 ~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg~--~~~~i~aGD-~v~~PkG~~~tW~v~e~ 140 (149)
.||.. +.|...+|++++++|++++..++|. +++.+...+ .+.+|+|..++....++
T Consensus 43 ~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~ 104 (141)
T 2pa7_A 43 KGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSS 104 (141)
T ss_dssp CSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCT
T ss_pred CCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCC
Confidence 36664 4456789999999999999998873 344455544 49999999999887654
No 126
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=94.32 E-value=0.14 Score=42.54 Aligned_cols=36 Identities=17% Similarity=0.320 Sum_probs=31.2
Q ss_pred CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCc
Q 031987 94 TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGM 131 (149)
Q Consensus 94 ~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~ 131 (149)
..-.++.+++|++++..++ +...+++||++++|++.
T Consensus 268 ~~~~il~v~~G~~~l~~~~--~~~~l~~G~~~~vpa~~ 303 (319)
T 1qwr_A 268 ESFLICSVIEGSGLLKYED--KTCPLKKGDHFILPAQM 303 (319)
T ss_dssp SSCEEEEEEEEEEEEEETT--EEEEEETTCEEEECTTC
T ss_pred CccEEEEEEcCeEEEEECC--EEEEEcCCcEEEEeCCC
Confidence 4567899999999999854 48899999999999986
No 127
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=94.17 E-value=0.15 Score=42.13 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=32.6
Q ss_pred CCc-eEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCc-EEEEE
Q 031987 94 TAT-ETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGM-KITWD 136 (149)
Q Consensus 94 ~~d-E~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~-~~tW~ 136 (149)
..- .++.+++| +++..+++ ...+++||++++|++. ..+.+
T Consensus 246 ~~~~~il~v~~G-~~i~~~~~--~~~l~~G~~~~ipa~~~~~~i~ 287 (300)
T 1zx5_A 246 GGVMNILYAAEG-YFILRGKE--TADLHRGYSCLVPASTDSFTVE 287 (300)
T ss_dssp CSBCEEEEEEES-CEEEESSS--EEEECTTCEEEECTTCCEEEEE
T ss_pred CCceEEEEEccc-EEEEeCCe--EEEEccceEEEEeCCCceEEEE
Confidence 444 78899999 99998655 7899999999999987 45554
No 128
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=93.54 E-value=0.4 Score=36.11 Aligned_cols=61 Identities=11% Similarity=0.171 Sum_probs=43.6
Q ss_pred eeEecCCccc-cccCC-CceEEEEEEeEEEEEECC-------------------------------------cceEEEEc
Q 031987 80 PKWGCPPSKF-PWTFT-ATETMYLLEGKVIVYVDG-------------------------------------REGSFEIG 120 (149)
Q Consensus 80 giWe~~pg~f-~~h~~-~dE~~yVLEG~v~vt~dg-------------------------------------g~~~~~i~ 120 (149)
-+|-..+|.. +.|++ .+=+...+.|+=++..-. ..-..+++
T Consensus 127 ~~wiG~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~ 206 (235)
T 4gjz_A 127 NAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILS 206 (235)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEEC
T ss_pred EEEEeCCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEEC
Confidence 3677777765 45765 566667789998887510 00256899
Q ss_pred CCcEEEEcCCcEEEEEEcCc
Q 031987 121 TGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 121 aGD~v~~PkG~~~tW~v~e~ 140 (149)
|||+++||+|+.|.=+..+.
T Consensus 207 pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 207 PGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp TTCEEEECTTCEEEEEESSS
T ss_pred CCCEEEeCCCCcEEEEECCC
Confidence 99999999999998776653
No 129
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=92.89 E-value=1.1 Score=40.30 Aligned_cols=43 Identities=14% Similarity=0.209 Sum_probs=30.0
Q ss_pred CChhhhhhcCCceeeeEecCCccc-ccc-CCCceEEEEEEeEEEEE
Q 031987 66 PPQSKLSELGVTSWPKWGCPPSKF-PWT-FTATETMYLLEGKVIVY 109 (149)
Q Consensus 66 ps~~~L~~lGv~~~giWe~~pg~f-~~h-~~~dE~~yVLEG~v~vt 109 (149)
+....|..+|+.- ..-...|+.+ .-| .+..|++||++|++.+-
T Consensus 38 ~~~p~l~~~Gvs~-~R~~i~p~Gl~lPh~~~a~el~yV~qG~g~~G 82 (531)
T 3fz3_A 38 FNQGDFQCAGVAA-SRITIQRNGLHLPSYSNAPQLIYIVQGRGVLG 82 (531)
T ss_dssp TTSHHHHHHTEEE-EEEEECTTEEEEEEEESSCEEEEEEECEEEEE
T ss_pred CCChhhccCcceE-EEEEecCCCEeCCccCCCCeEEEEEECcEEEE
Confidence 3445677778753 4456677776 223 36999999999998775
No 130
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=92.66 E-value=0.54 Score=40.98 Aligned_cols=46 Identities=17% Similarity=0.284 Sum_probs=36.4
Q ss_pred CCCceEEEEEEeEEEEEECCcceE-EEEcCCcEEEEcCCcEEEEEEc
Q 031987 93 FTATETMYLLEGKVIVYVDGREGS-FEIGTGDLVVFPKGMKITWDVI 138 (149)
Q Consensus 93 ~~~dE~~yVLEG~v~vt~dgg~~~-~~i~aGD~v~~PkG~~~tW~v~ 138 (149)
...-.++.+++|++++..+++... ..+++||++++|++...+.+..
T Consensus 377 ~~~~~illv~~G~g~i~~~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 377 LNGPSIVIATNGKGTIQITGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp CSSCEEEEEEESEEEEEETTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred CCCcEEEEEEeCeEEEEeCCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 456789999999999998654012 7999999999999966666654
No 131
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=92.61 E-value=1.5 Score=32.46 Aligned_cols=66 Identities=18% Similarity=0.217 Sum_probs=48.2
Q ss_pred eeeeEecC--Ccccc-cc---C---CCceEEEEEEeEEEEEE--CCc----ceEEEEcCCcEEEEcCCcEEEEEE-cCce
Q 031987 78 SWPKWGCP--PSKFP-WT---F---TATETMYLLEGKVIVYV--DGR----EGSFEIGTGDLVVFPKGMKITWDV-IEAV 141 (149)
Q Consensus 78 ~~giWe~~--pg~f~-~h---~---~~dE~~yVLEG~v~vt~--dgg----~~~~~i~aGD~v~~PkG~~~tW~v-~e~v 141 (149)
+.++|..+ |..+. .| . +.-+.+.||+|++++.. ++| ++.....+|+..++|++..++-+. .+++
T Consensus 13 ~tP~~t~~tlP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~ 92 (127)
T 3bb6_A 13 STPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDT 92 (127)
T ss_dssp ECCCBCTTTSCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTC
T ss_pred ecCCCCcccChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCE
Confidence 35677666 66663 34 2 35699999999999883 322 255679999999999999999997 5555
Q ss_pred EE
Q 031987 142 NK 143 (149)
Q Consensus 142 rK 143 (149)
+-
T Consensus 93 ~f 94 (127)
T 3bb6_A 93 YF 94 (127)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 132
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=92.54 E-value=0.71 Score=35.31 Aligned_cols=58 Identities=21% Similarity=0.318 Sum_probs=41.8
Q ss_pred ecCCccc-cccCC--CceEEEEEEeEEEEEE---CCcc----eEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 83 GCPPSKF-PWTFT--ATETMYLLEGKVIVYV---DGRE----GSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 83 e~~pg~f-~~h~~--~dE~~yVLEG~v~vt~---dgg~----~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
.-.||.. +.|-+ ...+++||+|+++.+. +++. ....+++||++++|+|..|+-+....
T Consensus 75 ~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~ 142 (171)
T 3eqe_A 75 NIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTS 142 (171)
T ss_dssp EECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSS
T ss_pred EECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCC
Confidence 3445654 34544 4678889999999864 2220 26789999999999999999887643
No 133
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=92.39 E-value=0.84 Score=35.12 Aligned_cols=62 Identities=11% Similarity=0.080 Sum_probs=46.4
Q ss_pred CCccc---cccCCCceEEEEEEeEEEEEECCcc---------eEEEEc---CCcEEEEcCCcEEEEEEcCc--eEEEEE
Q 031987 85 PPSKF---PWTFTATETMYLLEGKVIVYVDGRE---------GSFEIG---TGDLVVFPKGMKITWDVIEA--VNKHYS 146 (149)
Q Consensus 85 ~pg~f---~~h~~~dE~~yVLEG~v~vt~dgg~---------~~~~i~---aGD~v~~PkG~~~tW~v~e~--vrK~Yv 146 (149)
.+|.. |+|....+++++++|++.+...|.+ ..+.+. ..-.+++|+|+.|.+.+.+. ..-.|.
T Consensus 61 ~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~ 139 (174)
T 3ejk_A 61 LPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANC 139 (174)
T ss_dssp CBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEE
T ss_pred CCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEE
Confidence 45654 3455689999999999999885542 256677 56799999999999998755 444554
No 134
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=91.78 E-value=0.31 Score=40.77 Aligned_cols=44 Identities=16% Similarity=0.183 Sum_probs=37.8
Q ss_pred CCCceEEEE-EEeEEEEEECCcceEEEEcCCcEEEEcCCcE-EEEEEc
Q 031987 93 FTATETMYL-LEGKVIVYVDGREGSFEIGTGDLVVFPKGMK-ITWDVI 138 (149)
Q Consensus 93 ~~~dE~~yV-LEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~-~tW~v~ 138 (149)
....|++.| |.|.++|+.+|. .++++.-|++++|+|.+ .+....
T Consensus 76 l~~rE~~iV~lgG~~~V~vdg~--~f~lg~~dalYVp~G~~~v~~as~ 121 (289)
T 1ywk_A 76 LERRELGVINIGGPGFIEIDGA--KETMKKQDGYYIGKETKHVRFSSE 121 (289)
T ss_dssp TTTEEEEEEECSSCEEEEETTE--EEEECTTCEEEECTTCCCEEEEES
T ss_pred CCCcEEEEEEccCeEEEEECCE--EEecCCCCEEEeCCCCeEEEEEec
Confidence 467888877 799999999987 78999999999999976 777763
No 135
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=91.64 E-value=0.75 Score=36.41 Aligned_cols=48 Identities=19% Similarity=0.304 Sum_probs=35.9
Q ss_pred ecCCcc-ccccC-CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEE
Q 031987 83 GCPPSK-FPWTF-TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDV 137 (149)
Q Consensus 83 e~~pg~-f~~h~-~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v 137 (149)
...||. +..|. ...|+ +||+|++. . ++ ..+.+||-+..|.|..++...
T Consensus 152 r~~~G~~~~~~~hgG~Ei-lVL~G~~~--d-~~---~~~~~GsWlR~P~gs~h~~~a 201 (223)
T 3o14_A 152 KLEPGANLTSEAAGGIEV-LVLDGDVT--V-ND---EVLGRNAWLRLPEGEALSATA 201 (223)
T ss_dssp EECTTCEEEECCSSCEEE-EEEEEEEE--E-TT---EEECTTEEEEECTTCCEEEEE
T ss_pred EECCCCccCCCCCCcEEE-EEEEeEEE--E-CC---ceECCCeEEEeCCCCccCcEE
Confidence 334554 33332 67886 99999975 3 33 589999999999999999988
No 136
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=91.00 E-value=0.7 Score=37.50 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=36.6
Q ss_pred eEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceE
Q 031987 97 ETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVN 142 (149)
Q Consensus 97 E~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vr 142 (149)
=++||++|++++..+++ +...+.+||.++|..+-..+.+..++.+
T Consensus 204 ~~l~v~~G~v~v~g~~~-~~~~l~~gd~~~l~~~~~l~l~a~~~a~ 248 (256)
T 2vec_A 204 AYLQSIHGKFHALTHHE-EKAALTCGDGAFIRDEANITLVADSPLR 248 (256)
T ss_dssp EEEEEEESCEEEEETTE-EEEEECTTCEEEEESCSEEEEEESSSEE
T ss_pred EEEEEEECEEEECCccc-cceEECCCCEEEECCCCeEEEEeCCCCE
Confidence 68899999999976544 4678999999999988888887766654
No 137
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=90.37 E-value=0.48 Score=38.47 Aligned_cols=43 Identities=9% Similarity=0.099 Sum_probs=35.3
Q ss_pred cccccC--CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCc
Q 031987 88 KFPWTF--TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGM 131 (149)
Q Consensus 88 ~f~~h~--~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~ 131 (149)
.|+.|- +-+.+-||++|+++-.+.-| ....++|||+-++-+|.
T Consensus 76 gf~~HPHrg~EtvTyvl~G~~~H~DS~G-n~~~i~~GdvQ~MtAG~ 120 (256)
T 2vec_A 76 AFQPRTYPKVDILNVILDGEAEYRDSEG-NHVQASAGEALLLSTQP 120 (256)
T ss_dssp EEEEECCSSEEEEEEEEESEEEEEETTS-CEEEEETTEEEEECCCT
T ss_pred ccCCcCCCCcEEEEEEEeeEEEEEeCCC-CEEEECCCeEEEEECCC
Confidence 577663 45668899999999999866 68999999999997763
No 138
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=90.25 E-value=0.74 Score=36.06 Aligned_cols=54 Identities=13% Similarity=0.072 Sum_probs=39.1
Q ss_pred CCccc-ccc-CCCceEEEEEEeEEEEEE----CCc-----ceEEEEcCCcEEEEcC--CcEEEEEEc
Q 031987 85 PPSKF-PWT-FTATETMYLLEGKVIVYV----DGR-----EGSFEIGTGDLVVFPK--GMKITWDVI 138 (149)
Q Consensus 85 ~pg~f-~~h-~~~dE~~yVLEG~v~vt~----dgg-----~~~~~i~aGD~v~~Pk--G~~~tW~v~ 138 (149)
.||.. +.| .....+++||+|+.+.+. ++| +.+..+++||+++|+. |.-|+-...
T Consensus 87 ~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~ 153 (208)
T 2gm6_A 87 GPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNA 153 (208)
T ss_dssp CTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEES
T ss_pred CCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccC
Confidence 45544 333 235899999999998865 322 1368899999999999 877877743
No 139
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=90.17 E-value=0.53 Score=39.21 Aligned_cols=52 Identities=29% Similarity=0.488 Sum_probs=41.3
Q ss_pred CCCceEEEE-EEeEEEEEECCcceEEEEcCCcEEEEcCCcE-EEEEEcCc--eEEEEE
Q 031987 93 FTATETMYL-LEGKVIVYVDGREGSFEIGTGDLVVFPKGMK-ITWDVIEA--VNKHYS 146 (149)
Q Consensus 93 ~~~dE~~yV-LEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~-~tW~v~e~--vrK~Yv 146 (149)
....|++.| |.|.++|+.+|. .++++.-|++++|+|.+ .+....+. =-|+|+
T Consensus 76 l~~rE~~iV~l~G~~~V~vdG~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav 131 (282)
T 1xru_A 76 LERRELGVINIGGAGTITVDGQ--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYY 131 (282)
T ss_dssp TTTEEEEEEECSSCEEEEETTE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEE
T ss_pred cCCcEEEEEEccCeEEEEECCE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEE
Confidence 367788776 799999999987 78999999999999996 88876642 135554
No 140
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=89.64 E-value=0.36 Score=35.65 Aligned_cols=44 Identities=14% Similarity=0.241 Sum_probs=33.3
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
-...||..-.+ -..+.+++|++|.+.+..++| ....+++||.+-
T Consensus 98 ~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~~~g-~~~~l~~G~~fG 143 (202)
T 3bpz_A 98 EVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGN-KEMKLSDGSYFG 143 (202)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEECEEEEECTTS-CCEEEETTCEEC
T ss_pred eEECCCCEEEECCCcCCeEEEEeccEEEEEECCC-eEEEEcCCCEec
Confidence 34556665443 246789999999999998777 567899999874
No 141
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=89.09 E-value=0.66 Score=31.76 Aligned_cols=44 Identities=16% Similarity=0.108 Sum_probs=33.6
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
-...+|..-.. -..+.+++|++|.+.+..+|. ....+++||.+-
T Consensus 49 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~g~-~~~~~~~G~~fG 94 (139)
T 3ocp_A 49 VEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGV-KLCTMGPGKVFG 94 (139)
T ss_dssp EEECSSCEEECTTSCCCEEEEEEECCEEEEETTE-EEEEECTTCEES
T ss_pred EecCCCCEEEeCCCcCCEEEEEEeCEEEEEECCE-EEEEeCCCCEec
Confidence 34456665443 357889999999999988776 677899999874
No 142
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=88.93 E-value=1.2 Score=38.83 Aligned_cols=60 Identities=22% Similarity=0.291 Sum_probs=44.2
Q ss_pred eeEecCCcc--ccccCC-CceEEEEEEeEEEEEECCc-------------------ceEEEEcCCcEEEEcCCcEEEEEE
Q 031987 80 PKWGCPPSK--FPWTFT-ATETMYLLEGKVIVYVDGR-------------------EGSFEIGTGDLVVFPKGMKITWDV 137 (149)
Q Consensus 80 giWe~~pg~--f~~h~~-~dE~~yVLEG~v~vt~dgg-------------------~~~~~i~aGD~v~~PkG~~~tW~v 137 (149)
-.|-..+|. ++.||+ +|=|..-++|+=+..+-.- ....+++|||++++|+|+.|.=+.
T Consensus 142 n~y~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 142 NVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEEECTTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred ceEECCCCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 347777775 457876 5667777999988874110 136789999999999999998776
Q ss_pred cC
Q 031987 138 IE 139 (149)
Q Consensus 138 ~e 139 (149)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 143
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=88.00 E-value=0.81 Score=32.04 Aligned_cols=45 Identities=13% Similarity=0.099 Sum_probs=34.7
Q ss_pred eEecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 81 KWGCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 81 iWe~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
.....+|..-.. -..+.+++|++|.+.+..+|. ....+++||.+-
T Consensus 63 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~-~~~~~~~G~~fG 109 (154)
T 3pna_A 63 PVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE-WATSVGEGGSFG 109 (154)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESCEEEEETTE-EEEEECTTCEEC
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEecEEEEEECCE-EEEEecCCCEee
Confidence 345566665443 357889999999999999777 677899999874
No 144
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=87.79 E-value=0.99 Score=36.18 Aligned_cols=43 Identities=19% Similarity=0.209 Sum_probs=36.3
Q ss_pred ccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCc
Q 031987 88 KFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGM 131 (149)
Q Consensus 88 ~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~ 131 (149)
.|++| .+-+.+-|+++|+++-.+.-| ....++|||+-.+-+|.
T Consensus 53 gf~~HPHrg~EtvTyvl~G~~~H~DS~G-n~~~i~~GdvQ~MtAG~ 97 (242)
T 1tq5_A 53 GFGTHPHKDMEILTYVLEGTVEHQDSMG-NKEQVPAGEFQIMSAGT 97 (242)
T ss_dssp EEEEEEECSCEEEEEEEESEEEEEESSS-CEEEEETTCEEEEECTT
T ss_pred cCCCcCCCCcEEEEEEEEeEEEEEeCCC-CcEEECCCcEEEEECCC
Confidence 57665 567789999999999999866 68999999999997774
No 145
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=87.25 E-value=1.1 Score=31.07 Aligned_cols=44 Identities=18% Similarity=0.338 Sum_probs=33.7
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVF 127 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~ 127 (149)
...+|..-+. -..+.+++|++|.+++..++. ....+++||.+--
T Consensus 54 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 54 HCAPGDLIYHAGESVDSLCFVVSGSLEVIQDDE-VVAILGKGDVFGD 99 (160)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESEEEEEETTE-EEEEEETTCEEEC
T ss_pred eeCCCCEEEeCCCCccEEEEEEeeEEEEEECCE-EEEEecCCCEeCc
Confidence 4445555443 347899999999999999776 6778999999874
No 146
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=86.70 E-value=0.37 Score=33.00 Aligned_cols=44 Identities=9% Similarity=-0.092 Sum_probs=31.9
Q ss_pred EecC-CccccccC--CCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 82 WGCP-PSKFPWTF--TATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 82 We~~-pg~f~~h~--~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
-... +|..-..- ..+.+++|++|.+.+..++| ....+++||.+-
T Consensus 42 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g-~~~~l~~G~~fG 88 (134)
T 2d93_A 42 EVVEQAGAIILEDGQELDSWYVILNGTVEISHPDG-KVENLFMGNSFG 88 (134)
T ss_dssp EEECSSSCEEECTTCEECEEEECCBSCEEEECSSS-CEEEECTTCEES
T ss_pred EEecCCCCEEEeCCCCCCeEEEEEeCEEEEEcCCC-cEEEecCCCccC
Confidence 3445 56554432 35779999999999998766 458899999773
No 147
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=85.99 E-value=3.3 Score=32.00 Aligned_cols=61 Identities=13% Similarity=0.225 Sum_probs=42.7
Q ss_pred Cccc---ccc--CCCceEEEEEEeEE-EEEECCcc--------eEEEEcC--CcEEEEcCCcEEEEEEcCc-eEEEEE
Q 031987 86 PSKF---PWT--FTATETMYLLEGKV-IVYVDGRE--------GSFEIGT--GDLVVFPKGMKITWDVIEA-VNKHYS 146 (149)
Q Consensus 86 pg~f---~~h--~~~dE~~yVLEG~v-~vt~dgg~--------~~~~i~a--GD~v~~PkG~~~tW~v~e~-vrK~Yv 146 (149)
+|.. |+| ..+.+.+++++|++ .+.+|... ..+++.+ +..+++|+|+.|.+.+.+. ..-.|.
T Consensus 57 ~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 134 (185)
T 1ep0_A 57 RGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYK 134 (185)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEe
Confidence 5654 455 56899999999996 55554431 3455655 6899999999999998765 333343
No 148
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=85.46 E-value=4.8 Score=33.43 Aligned_cols=58 Identities=12% Similarity=0.252 Sum_probs=40.3
Q ss_pred eEecCCc-cccccCC-CceEEEEEEeEEEEEEC-C------------------------------------cceEEEEcC
Q 031987 81 KWGCPPS-KFPWTFT-ATETMYLLEGKVIVYVD-G------------------------------------REGSFEIGT 121 (149)
Q Consensus 81 iWe~~pg-~f~~h~~-~dE~~yVLEG~v~vt~d-g------------------------------------g~~~~~i~a 121 (149)
.|-...| .+..|++ ++=+...+.|+=++..- . .....+++|
T Consensus 145 ~~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~p 224 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTP 224 (342)
T ss_dssp EEEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECT
T ss_pred EEEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECC
Confidence 5665533 3467776 56666668898666633 1 014678999
Q ss_pred CcEEEEcCCcEEEEEEc
Q 031987 122 GDLVVFPKGMKITWDVI 138 (149)
Q Consensus 122 GD~v~~PkG~~~tW~v~ 138 (149)
||++++|+|+.|.=+..
T Consensus 225 GD~LyiP~gwwH~v~s~ 241 (342)
T 1vrb_A 225 GTMLYLPRGLWHSTKSD 241 (342)
T ss_dssp TCEEEECTTCEEEEECS
T ss_pred CcEEEeCCCccEEEEEC
Confidence 99999999999987766
No 149
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=85.35 E-value=2 Score=34.35 Aligned_cols=42 Identities=12% Similarity=0.102 Sum_probs=33.3
Q ss_pred CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcCceE
Q 031987 95 ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIEAVN 142 (149)
Q Consensus 95 ~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e~vr 142 (149)
..=++||++|++++ ++ ..+.+||.++|..|-..+.+..+..+
T Consensus 181 ~~~~~~v~~G~v~v---~g---~~l~~gd~~~~~~~~~l~l~a~~~a~ 222 (242)
T 1tq5_A 181 RRVWIQVVKGNVTI---NG---VKASTSDGLAIWDEQAISIHADSDSE 222 (242)
T ss_dssp CEEEEEEEESEEEE---TT---EEEETTCEEEEESCSCEEEEESSSEE
T ss_pred cEEEEEEccCcEEE---CC---EEeCCCCEEEECCCCeEEEEeCCCCE
Confidence 45679999999988 34 36999999999988877777766654
No 150
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=84.71 E-value=1.3 Score=32.36 Aligned_cols=44 Identities=9% Similarity=0.149 Sum_probs=32.2
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
...||..-.+ -..+.+++|++|.+.+...+|.....+++||.+-
T Consensus 98 ~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fG 143 (198)
T 2ptm_A 98 VFQPADYVIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYFG 143 (198)
T ss_dssp EECTTCEEECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEES
T ss_pred eeCCCCEEEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEec
Confidence 4456665443 3467899999999999976663566899999873
No 151
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=84.30 E-value=0.94 Score=33.61 Aligned_cols=43 Identities=16% Similarity=0.101 Sum_probs=32.8
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
...+|..-.. -..+.+++|++|.+.+..++. ....+++||.+-
T Consensus 34 ~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~~~~-~~~~~~~g~~fG 78 (246)
T 3of1_A 34 SVPKGATIIKQGDQGDYFYVVEKGTVDFYVNDN-KVNSSGPGSSFG 78 (246)
T ss_dssp EECTTCEEECTTCCCCEEEEEEECCEEEESTTS-CCEEECTTCEEC
T ss_pred EECCCCEEEecCCCCCEEEEEEeeEEEEEECCE-EEEecCCCCeee
Confidence 3445554332 357899999999999999877 678899999874
No 152
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=83.95 E-value=0.74 Score=30.99 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=28.9
Q ss_pred hhhhcCCceeeeEecCCccc---cccCCCceEEEEEEeEEEEEE
Q 031987 70 KLSELGVTSWPKWGCPPSKF---PWTFTATETMYLLEGKVIVYV 110 (149)
Q Consensus 70 ~L~~lGv~~~giWe~~pg~f---~~h~~~dE~~yVLEG~v~vt~ 110 (149)
-|..+|.. ...-.-.+|.. +||....|++||++|++.+..
T Consensus 30 ~Ln~lgls-~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 30 QLRDLDIL-LNCLQMNEGALFVPHYNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp HHHTTTEE-EEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEE
T ss_pred ccCcCCcc-eEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEE
Confidence 46667654 33345566664 577789999999999888876
No 153
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=83.39 E-value=1.5 Score=33.86 Aligned_cols=56 Identities=18% Similarity=0.307 Sum_probs=38.1
Q ss_pred EecCCccc-ccc-CCCceEEEEEEeEE-EEEE--CCcceEEE------EcCCcE--EEEcCCcEEEEEEc
Q 031987 82 WGCPPSKF-PWT-FTATETMYLLEGKV-IVYV--DGREGSFE------IGTGDL--VVFPKGMKITWDVI 138 (149)
Q Consensus 82 We~~pg~f-~~h-~~~dE~~yVLEG~v-~vt~--dgg~~~~~------i~aGD~--v~~PkG~~~tW~v~ 138 (149)
+-.+++.+ .|| ...||+-|...|.. ++.. +|| .... +.+|+. +++|+|+.-.=+..
T Consensus 54 fLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg-~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~ 122 (170)
T 1yud_A 54 FLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEG-ELTTAQLGLDLAAGERPQFLVPKGCIFGSAMN 122 (170)
T ss_dssp EEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTS-CEEEEEESSCTTTTEESCEEECTTCEEEEEES
T ss_pred EEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCC-CEEEEEeCCCcccCceeEEEECCCCEEEEEEC
Confidence 33444544 466 46899999999985 6665 333 2344 567998 99999987655544
No 154
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=83.31 E-value=5.1 Score=30.87 Aligned_cols=61 Identities=16% Similarity=0.156 Sum_probs=42.5
Q ss_pred Cccc---ccc--CCCceEEEEEEeEE-EEEECCcc--------eEEEEcC--CcEEEEcCCcEEEEEEcCc-eEEEEE
Q 031987 86 PSKF---PWT--FTATETMYLLEGKV-IVYVDGRE--------GSFEIGT--GDLVVFPKGMKITWDVIEA-VNKHYS 146 (149)
Q Consensus 86 pg~f---~~h--~~~dE~~yVLEG~v-~vt~dgg~--------~~~~i~a--GD~v~~PkG~~~tW~v~e~-vrK~Yv 146 (149)
+|.. |+| ..+..++++++|++ .+.+|... ..+++.+ +..+++|+|+.|.+.+.+. ..-.|.
T Consensus 58 ~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 135 (184)
T 2ixk_A 58 RGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYK 135 (184)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEEEe
Confidence 5654 344 45899999999996 55555431 3455665 5889999999999998765 333343
No 155
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=83.26 E-value=7.1 Score=28.47 Aligned_cols=65 Identities=15% Similarity=0.164 Sum_probs=47.0
Q ss_pred eeeEecC--Ccccc-ccC---CCceEEEEEEeEEEEEE-C-Cc----ceEEEEcCCcEEEEcCCcEEEEEEcCceEE
Q 031987 79 WPKWGCP--PSKFP-WTF---TATETMYLLEGKVIVYV-D-GR----EGSFEIGTGDLVVFPKGMKITWDVIEAVNK 143 (149)
Q Consensus 79 ~giWe~~--pg~f~-~h~---~~dE~~yVLEG~v~vt~-d-gg----~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK 143 (149)
.++|..+ |..+. .|. +.-.-.-||+|++++.. + ++ .+...+.+|+..++|+...+.=+..++++-
T Consensus 16 tP~~t~~tlP~~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f 92 (119)
T 3dl3_A 16 TPFFTKDNVPEALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQF 92 (119)
T ss_dssp CCCBCTTTCCHHHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEE
T ss_pred CCCCChhhchHHHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEE
Confidence 4556655 44442 232 34567889999999994 2 22 156789999999999999999988888765
No 156
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=83.21 E-value=6.2 Score=35.03 Aligned_cols=59 Identities=22% Similarity=0.335 Sum_probs=43.8
Q ss_pred eEecCCcc--ccccCC-CceEEEEEEeEEEEEECCc-----------------------ceEEEEcCCcEEEEcCCcEEE
Q 031987 81 KWGCPPSK--FPWTFT-ATETMYLLEGKVIVYVDGR-----------------------EGSFEIGTGDLVVFPKGMKIT 134 (149)
Q Consensus 81 iWe~~pg~--f~~h~~-~dE~~yVLEG~v~vt~dgg-----------------------~~~~~i~aGD~v~~PkG~~~t 134 (149)
.|-..+|. |..|++ +|=|+.=++|+=+..+-.- .....++|||++++|+|+.|.
T Consensus 168 ~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~ 247 (489)
T 4diq_A 168 VYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQ 247 (489)
T ss_dssp EEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEE
T ss_pred EEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceE
Confidence 57777774 567886 5656666999888776220 025889999999999999998
Q ss_pred EEEcC
Q 031987 135 WDVIE 139 (149)
Q Consensus 135 W~v~e 139 (149)
=+..+
T Consensus 248 ~~s~~ 252 (489)
T 4diq_A 248 AECQD 252 (489)
T ss_dssp EEBCS
T ss_pred EEecC
Confidence 88875
No 157
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=82.61 E-value=1.5 Score=32.39 Aligned_cols=44 Identities=23% Similarity=0.318 Sum_probs=34.1
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVF 127 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~ 127 (149)
...||..-.+ -..+.+++|++|.+.+..+|. ....+++||.+--
T Consensus 102 ~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~-~~~~l~~G~~fGe 147 (212)
T 3ukn_A 102 FCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNT-VLAILGKGDLIGS 147 (212)
T ss_dssp EECTTCEEECTTSBCCEEEEEEECCEEEESSSC-EEEEECTTCEEEC
T ss_pred EeCCCCEEEECCCcccEEEEEEecEEEEEECCe-EEEEecCCCCcCc
Confidence 4456665443 246899999999999998776 6778999998863
No 158
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=81.60 E-value=1.4 Score=36.52 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=30.9
Q ss_pred CCCceEEEEEEe----EEEEEECCc------------c-----eEEEEcCCcEEEEcCCcEEEE
Q 031987 93 FTATETMYLLEG----KVIVYVDGR------------E-----GSFEIGTGDLVVFPKGMKITW 135 (149)
Q Consensus 93 ~~~dE~~yVLEG----~v~vt~dgg------------~-----~~~~i~aGD~v~~PkG~~~tW 135 (149)
++..|..|+|+. ++.+-.++. . ..+.+++||++++|+|..|..
T Consensus 115 ~gKpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 115 LGKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp CCCCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEE
T ss_pred CCCCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEe
Confidence 578999999996 232222210 0 478999999999999998853
No 159
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=81.56 E-value=4 Score=35.73 Aligned_cols=59 Identities=10% Similarity=0.075 Sum_probs=42.0
Q ss_pred eEecCCccc-cccCCCce---EEEEEEeEEEEEE-----------------------------CCcceEEEEcCCcEEEE
Q 031987 81 KWGCPPSKF-PWTFTATE---TMYLLEGKVIVYV-----------------------------DGREGSFEIGTGDLVVF 127 (149)
Q Consensus 81 iWe~~pg~f-~~h~~~dE---~~yVLEG~v~vt~-----------------------------dgg~~~~~i~aGD~v~~ 127 (149)
.|-+.+|.+ ++|++... +..++.|+=++.. +.. -..++.|||+++|
T Consensus 200 ~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~-~~v~l~pGE~LfI 278 (451)
T 2yu1_A 200 CLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDC-QRIELKQGYTFVI 278 (451)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCC-EEEEECTTCEEEE
T ss_pred EEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccc-eEEEECCCcEEEe
Confidence 356666665 46766443 6678888876652 123 5788999999999
Q ss_pred cCCcEEEEEEcCc
Q 031987 128 PKGMKITWDVIEA 140 (149)
Q Consensus 128 PkG~~~tW~v~e~ 140 (149)
|.||.|.=...+.
T Consensus 279 PsGWwH~V~nled 291 (451)
T 2yu1_A 279 PSGWIHAVYTPTD 291 (451)
T ss_dssp CTTCEEEEECSSC
T ss_pred CCCceEEEecCCC
Confidence 9999988776653
No 160
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=81.16 E-value=2 Score=32.97 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=32.8
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
...+|..-.+ -..+.+++|++|.+.+..+|. ....+++||.+-
T Consensus 66 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~g~-~~~~l~~G~~fG 110 (291)
T 2qcs_B 66 SFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE-WATSVGEGGSFG 110 (291)
T ss_dssp EECTTCEEECTTSBCCEEEEEEECCEEEEETTE-EEEEECTTCEEC
T ss_pred EECCCCEEEeCCCCCceEEEEeeeEEEEEECCe-EEEEcCCCCccc
Confidence 3445655433 346889999999999999776 778899999874
No 161
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=80.70 E-value=7.9 Score=30.00 Aligned_cols=54 Identities=7% Similarity=-0.044 Sum_probs=38.4
Q ss_pred CCccc-cccCC--CceEEEEEEeEEEEEE----CCc------ceEEEEcCCcEEEE-cCCcEEEEEEc
Q 031987 85 PPSKF-PWTFT--ATETMYLLEGKVIVYV----DGR------EGSFEIGTGDLVVF-PKGMKITWDVI 138 (149)
Q Consensus 85 ~pg~f-~~h~~--~dE~~yVLEG~v~vt~----dgg------~~~~~i~aGD~v~~-PkG~~~tW~v~ 138 (149)
.||.. ++|-+ ...+++||+|+.+-+. +++ .....+++||+.+| |++--|+-...
T Consensus 78 ~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~ 145 (200)
T 3eln_A 78 GEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENV 145 (200)
T ss_dssp CTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECC
T ss_pred CCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECC
Confidence 45554 45543 5799999999999885 221 13688999999999 77667766654
No 162
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=80.26 E-value=2 Score=33.26 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=31.7
Q ss_pred CCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 85 PPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 85 ~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
.+|..-.. -..+.+++|++|.+.+..+|. ....+.+||.+-
T Consensus 68 ~~g~~i~~~G~~~~~~yiI~~G~v~v~~~g~-~~~~~~~G~~fG 110 (299)
T 3shr_A 68 GKDSCIIKEGDVGSLVYVMEDGKVEVTKEGV-KLCTMGPGKVFG 110 (299)
T ss_dssp CTTCEEECTTCBCCCEEEEEESCEEEEETTE-EEEEECTTCEES
T ss_pred CCCCEEEcCCCcCceEEEEEEEEEEEEECCE-EEEEeCCCCeee
Confidence 45554332 346889999999999998887 778899999875
No 163
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=80.09 E-value=3.4 Score=34.57 Aligned_cols=46 Identities=17% Similarity=0.517 Sum_probs=36.1
Q ss_pred CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcE-EEEEE--cCceEEEE
Q 031987 93 FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMK-ITWDV--IEAVNKHY 145 (149)
Q Consensus 93 ~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~-~tW~v--~e~vrK~Y 145 (149)
+..-| +|||+|++.+ |+ ..+.+|+-.++|+|.. ..|.+ .+.+.-.+
T Consensus 110 ~ad~E-~fVL~G~i~~---G~---~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL~ 158 (303)
T 2qdr_A 110 TADLE-IFVIKGAIQL---GE---WQLNKHSYSFIPAGVRIGSWKVLGGEEAEILW 158 (303)
T ss_dssp SSCEE-EEEEESEEEE---TT---EEECTTEEEEECTTCCBCCEEEETTSCEEEEE
T ss_pred ccceE-EEEEEeEEEe---CC---EEecCCceEEecCCCccCceeecCCCCcEEEE
Confidence 34566 8999999887 45 7899999999999995 78888 66655443
No 164
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=80.06 E-value=4.1 Score=33.08 Aligned_cols=45 Identities=18% Similarity=0.345 Sum_probs=33.6
Q ss_pred CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcC-C----cEEEEEEcCceE
Q 031987 94 TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPK-G----MKITWDVIEAVN 142 (149)
Q Consensus 94 ~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~Pk-G----~~~tW~v~e~vr 142 (149)
...=++||++|++++ +|+ ...+.+||.++|.. | -..+.+..+..+
T Consensus 187 ~~~~~lyv~~G~v~v--~g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~~~a~ 236 (277)
T 2p17_A 187 HYNGFLYILEGSGVF--GAD--NIEGKAGQALFFSRHNRGEETELNVTAREKLR 236 (277)
T ss_dssp TCEEEEEEEESEEEE--TTT--TEEEETTEEEEECCCCTTCEEEEEEEESSSEE
T ss_pred CCEEEEEEEeCeEEE--CCC--ceEeCCCcEEEEcCCCCCccceEEEEeCCCcE
Confidence 456789999999877 442 25799999999996 7 666766655543
No 165
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=79.90 E-value=5.9 Score=32.37 Aligned_cols=26 Identities=12% Similarity=0.367 Sum_probs=21.5
Q ss_pred eEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 115 GSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 115 ~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
..+.+.||+.+.+++|..|.|...+.
T Consensus 172 ~~i~L~PGESiTl~Pg~~H~F~ae~g 197 (246)
T 3kmh_A 172 SQLRLSPGESICLPPGLYHSFWAEAG 197 (246)
T ss_dssp CEEEECTTCEEEECTTEEEEEEECTT
T ss_pred CEEEECCCCeEecCCCCEEEEEecCC
Confidence 36678999999999999999887654
No 166
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=79.65 E-value=2 Score=35.56 Aligned_cols=61 Identities=15% Similarity=0.019 Sum_probs=40.4
Q ss_pred eeEecCCccc-cccCC-CceEEEEEEeEEEEEEC------------------C---------------cceEEEEcCCcE
Q 031987 80 PKWGCPPSKF-PWTFT-ATETMYLLEGKVIVYVD------------------G---------------REGSFEIGTGDL 124 (149)
Q Consensus 80 giWe~~pg~f-~~h~~-~dE~~yVLEG~v~vt~d------------------g---------------g~~~~~i~aGD~ 124 (149)
.+|-..+|.. ..|++ ++=+...+.|+=++..- + ..-..+++|||+
T Consensus 170 ~l~~g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~ 249 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDV 249 (338)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCE
T ss_pred eeEECCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCE
Confidence 4566666654 34765 44455567787666520 0 014678999999
Q ss_pred EEEcCCcEEEEEEcCc
Q 031987 125 VVFPKGMKITWDVIEA 140 (149)
Q Consensus 125 v~~PkG~~~tW~v~e~ 140 (149)
+++|+||.|.=...+.
T Consensus 250 LyiP~gWwH~v~~l~~ 265 (338)
T 3al5_A 250 LFIPALWFHNVISEEF 265 (338)
T ss_dssp EEECTTCEEEEEESSC
T ss_pred EEECCCCeEEEeeCCC
Confidence 9999999988776643
No 167
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=78.92 E-value=9.3 Score=33.40 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=42.3
Q ss_pred eEecCCccc-cccCCCce---EEEEEEeEEEEEE-----------------------------CCcceEEEEcCCcEEEE
Q 031987 81 KWGCPPSKF-PWTFTATE---TMYLLEGKVIVYV-----------------------------DGREGSFEIGTGDLVVF 127 (149)
Q Consensus 81 iWe~~pg~f-~~h~~~dE---~~yVLEG~v~vt~-----------------------------dgg~~~~~i~aGD~v~~ 127 (149)
.|-+.+|.+ ++|++... ..+++.|+=++.. +.. -..+++|||++++
T Consensus 235 ~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~-~~v~l~pGetlfI 313 (447)
T 3kv4_A 235 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC-YKCSVKQGQTLFI 313 (447)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCC-EEEEEETTCEEEE
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccce-EEEEECCCcEEec
Confidence 455566666 46766444 5678999877753 112 4678999999999
Q ss_pred cCCcEEEEEEcCc
Q 031987 128 PKGMKITWDVIEA 140 (149)
Q Consensus 128 PkG~~~tW~v~e~ 140 (149)
|.||.|.=...+.
T Consensus 314 PsGWwH~V~nled 326 (447)
T 3kv4_A 314 PTGWIHAVLTPVD 326 (447)
T ss_dssp CTTCEEEEEESSC
T ss_pred CCCCeEEEecCCC
Confidence 9999887776654
No 168
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=78.85 E-value=8.3 Score=30.10 Aligned_cols=55 Identities=18% Similarity=0.306 Sum_probs=40.7
Q ss_pred Ccccc-ccC--C---CceEEEEEEeEE-EEEECCc--------ceEEEEcC--CcEEEEcCCcEEEEEEcCc
Q 031987 86 PSKFP-WTF--T---ATETMYLLEGKV-IVYVDGR--------EGSFEIGT--GDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 86 pg~f~-~h~--~---~dE~~yVLEG~v-~vt~dgg--------~~~~~i~a--GD~v~~PkG~~~tW~v~e~ 140 (149)
+|..+ +|+ . +..++++++|++ .+.+|.. -..+++.+ +..++||+|+.+.+.+.+.
T Consensus 74 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd 145 (196)
T 1wlt_A 74 KGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALED 145 (196)
T ss_dssp TTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSS
T ss_pred CCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC
Confidence 56543 443 2 689999999999 6666543 13456665 7899999999999998866
No 169
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=78.62 E-value=3.7 Score=34.17 Aligned_cols=59 Identities=10% Similarity=0.022 Sum_probs=43.6
Q ss_pred eEecCCccc-cccCC-CceEEEEEEeEEEEEEC--------------------------C------------cceEEEEc
Q 031987 81 KWGCPPSKF-PWTFT-ATETMYLLEGKVIVYVD--------------------------G------------REGSFEIG 120 (149)
Q Consensus 81 iWe~~pg~f-~~h~~-~dE~~yVLEG~v~vt~d--------------------------g------------g~~~~~i~ 120 (149)
+|-..+|.. ..|++ .+=+...+.|+=++..= + ..-..+++
T Consensus 187 l~iG~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~ 266 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVG 266 (349)
T ss_dssp EEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEEC
T ss_pred EEEECCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEEC
Confidence 678777765 56876 45666678998776630 0 11467899
Q ss_pred CCcEEEEcCCcEEEEEEcC
Q 031987 121 TGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 121 aGD~v~~PkG~~~tW~v~e 139 (149)
|||++++|.||.|.=+..+
T Consensus 267 pGD~LyiP~gWwH~V~~l~ 285 (349)
T 3d8c_A 267 PGDVLYIPMYWWHHIESLL 285 (349)
T ss_dssp TTCEEEECTTCEEEEEECT
T ss_pred CCCEEEECCCCcEEEEEcC
Confidence 9999999999999888775
No 170
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=78.57 E-value=2.8 Score=32.90 Aligned_cols=36 Identities=11% Similarity=0.121 Sum_probs=30.9
Q ss_pred CceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCc
Q 031987 95 ATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGM 131 (149)
Q Consensus 95 ~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~ 131 (149)
..-++|+++|+++++.+++ +...+.+||++.+-...
T Consensus 140 ~~~~v~~l~G~~~v~~~~~-~~~~L~~~d~l~~~~~~ 175 (200)
T 1yll_A 140 STLLLFAQQDGVAISLQGQ-PRGQLAAHDCLCAEGLQ 175 (200)
T ss_dssp SEEEEEESSSCEEEEETTE-EEEEECTTCEEEEESCC
T ss_pred CEEEEEEccCcEEEEcCCC-ceeecCCCCEEEEeCCC
Confidence 4568999999999998866 68999999999997764
No 171
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=78.14 E-value=9 Score=32.78 Aligned_cols=59 Identities=12% Similarity=0.082 Sum_probs=41.8
Q ss_pred eEecCCccc-cccCCCce---EEEEEEeEEEEEEC-----------------------------CcceEEEEcCCcEEEE
Q 031987 81 KWGCPPSKF-PWTFTATE---TMYLLEGKVIVYVD-----------------------------GREGSFEIGTGDLVVF 127 (149)
Q Consensus 81 iWe~~pg~f-~~h~~~dE---~~yVLEG~v~vt~d-----------------------------gg~~~~~i~aGD~v~~ 127 (149)
.|-+.+|.+ ++|++... +..++.|+=++..- .. -...++|||++++
T Consensus 151 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~-~ev~l~pGEtLfI 229 (371)
T 3k3o_A 151 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC-YKCSVKQGQTLFI 229 (371)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCC-EEEEEETTCEEEE
T ss_pred EEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCce-EEEEECCCcEEEe
Confidence 566666766 56776444 46789998776541 12 4678999999999
Q ss_pred cCCcEEEEEEcCc
Q 031987 128 PKGMKITWDVIEA 140 (149)
Q Consensus 128 PkG~~~tW~v~e~ 140 (149)
|.||.|.=...+.
T Consensus 230 PsGWwH~V~nled 242 (371)
T 3k3o_A 230 PTGWIHAVLTPVD 242 (371)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCeEEEecCCC
Confidence 9999887665443
No 172
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=77.54 E-value=4.2 Score=30.00 Aligned_cols=42 Identities=14% Similarity=0.019 Sum_probs=31.0
Q ss_pred CCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 85 PPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 85 ~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
.+|..-.. -..+.+++|++|++++...+.+....+++||.+-
T Consensus 154 ~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~~~~~l~~g~~fG 197 (246)
T 3of1_A 154 QPGETIIREGDQGENFYLIEYGAVDVSKKGQGVINKLKDHDYFG 197 (246)
T ss_dssp CTTCEEECTTSBCCEEEEEEECEEEEEETTTEEEEEEETTCEEC
T ss_pred CCCCEEEeCCCcCCEEEEEEecEEEEEEcCCceEEEcCCCCccc
Confidence 34444332 2468899999999999998764567899999873
No 173
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=77.03 E-value=2.9 Score=28.11 Aligned_cols=46 Identities=22% Similarity=0.314 Sum_probs=29.7
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEEC--Ccce-----EEEEcCCcEEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYVD--GREG-----SFEIGTGDLVVF 127 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~d--gg~~-----~~~i~aGD~v~~ 127 (149)
-...+|..-++ -..+.+++|++|.+.+... +|++ ...+++||.+-.
T Consensus 32 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~ 86 (142)
T 3mdp_A 32 KSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGV 86 (142)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEECG
T ss_pred EecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEech
Confidence 34456665443 3478999999999999752 2212 346899998753
No 174
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=76.76 E-value=11 Score=28.92 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=35.9
Q ss_pred CCceEEEEEEeEE-EEEECCc--------ceEEEEcC--CcEEEEcCCcEEEEEEcCc
Q 031987 94 TATETMYLLEGKV-IVYVDGR--------EGSFEIGT--GDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 94 ~~dE~~yVLEG~v-~vt~dgg--------~~~~~i~a--GD~v~~PkG~~~tW~v~e~ 140 (149)
.+..++++++|++ .+.+|.. -..+++.+ +..++||+|+.|.+.+.+.
T Consensus 70 ~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd 127 (183)
T 1dzr_A 70 AQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSE 127 (183)
T ss_dssp CCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred CCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC
Confidence 5689999999996 5555443 13456665 5899999999999998765
No 175
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=76.44 E-value=11 Score=29.60 Aligned_cols=58 Identities=12% Similarity=0.203 Sum_probs=47.6
Q ss_pred CccccccCCCceEEEEEEeE-EEEEECCcceEEEEcCCcEEEEcCCcEEEEEEc-CceEEE
Q 031987 86 PSKFPWTFTATETMYLLEGK-VIVYVDGREGSFEIGTGDLVVFPKGMKITWDVI-EAVNKH 144 (149)
Q Consensus 86 pg~f~~h~~~dE~~yVLEG~-v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~-e~vrK~ 144 (149)
.|.|..--.+|=++.+|+|. ++++.+|. ....+.+++.+.|+.++...-+.. .+++-+
T Consensus 57 ~g~FS~FpG~dR~l~lL~G~gl~L~~~g~-~~~~L~~~~p~~F~G~~~v~a~L~~G~v~Df 116 (193)
T 3esg_A 57 SGGFSSFAGYQRVITVIQGAGMVLTVDGE-EQRGLLPLQPFAFRGDSQVSCRLITGPIRDF 116 (193)
T ss_dssp SEECCCCTTCEEEEEEEESSCEEEEETTS-CCEEECBTCCEEEETTSCEEEEESSSCEEEE
T ss_pred CCCCCCCCCceEEEEEEcCCcEEEEeCCC-ccEecCCCCCEEeCCCCeEEEEECCCCEEEE
Confidence 56666656799999999997 99999886 678899999999999999888754 556544
No 176
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=76.32 E-value=11 Score=29.56 Aligned_cols=63 Identities=16% Similarity=0.292 Sum_probs=42.9
Q ss_pred CCcccc-ccC-----CCceEEEEEEeEE-EEEECC--cc------eEEEEcC--CcEEEEcCCcEEEEEEcCc-eEEEEE
Q 031987 85 PPSKFP-WTF-----TATETMYLLEGKV-IVYVDG--RE------GSFEIGT--GDLVVFPKGMKITWDVIEA-VNKHYS 146 (149)
Q Consensus 85 ~pg~f~-~h~-----~~dE~~yVLEG~v-~vt~dg--g~------~~~~i~a--GD~v~~PkG~~~tW~v~e~-vrK~Yv 146 (149)
.+|..+ +|+ .+.+++++++|++ .+.+|. +. ..+++.+ +-.++||+|+.|.+.+.+. ..-.|.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~ 157 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMYK 157 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEEE
Confidence 466653 443 3799999999995 344442 21 3456765 7999999999999998765 444454
Q ss_pred e
Q 031987 147 L 147 (149)
Q Consensus 147 i 147 (149)
.
T Consensus 158 ~ 158 (205)
T 3ryk_A 158 V 158 (205)
T ss_dssp E
T ss_pred c
Confidence 3
No 177
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=74.66 E-value=9.8 Score=29.82 Aligned_cols=52 Identities=21% Similarity=0.297 Sum_probs=38.6
Q ss_pred CceEEEEEEeEE-EEEECCcc--------eEEEEcC--CcEEEEcCCcEEEEEEcCc-eEEEEE
Q 031987 95 ATETMYLLEGKV-IVYVDGRE--------GSFEIGT--GDLVVFPKGMKITWDVIEA-VNKHYS 146 (149)
Q Consensus 95 ~dE~~yVLEG~v-~vt~dgg~--------~~~~i~a--GD~v~~PkG~~~tW~v~e~-vrK~Yv 146 (149)
+..++++++|++ .+.+|... ..+++.+ +..++||+|+.|.+.+.+. ..-.|.
T Consensus 71 q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 134 (205)
T 1oi6_A 71 TAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYM 134 (205)
T ss_dssp CCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCeEEEEe
Confidence 789999999996 66666531 3466666 5789999999999998765 434443
No 178
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=72.18 E-value=11 Score=29.95 Aligned_cols=46 Identities=20% Similarity=0.187 Sum_probs=35.5
Q ss_pred CceEEEEEEeEE-EEEECCc--------ceEEEEcC--CcEEEEcCCcEEEEEEcCc
Q 031987 95 ATETMYLLEGKV-IVYVDGR--------EGSFEIGT--GDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 95 ~dE~~yVLEG~v-~vt~dgg--------~~~~~i~a--GD~v~~PkG~~~tW~v~e~ 140 (149)
+..++++++|++ .+.+|.. -..+++.+ +..++||+|+.|.+.+.+.
T Consensus 79 q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd 135 (216)
T 2c0z_A 79 QAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISD 135 (216)
T ss_dssp CCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred cceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCC
Confidence 789999999996 5555543 13456666 4799999999999998765
No 179
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=70.69 E-value=23 Score=28.21 Aligned_cols=61 Identities=16% Similarity=0.191 Sum_probs=42.6
Q ss_pred Ccccc-ccCC-----CceEEEEEEeEE-EEEECCc--------ceEEEEcC--CcEEEEcCCcEEEEEEcCc-eEEEEE
Q 031987 86 PSKFP-WTFT-----ATETMYLLEGKV-IVYVDGR--------EGSFEIGT--GDLVVFPKGMKITWDVIEA-VNKHYS 146 (149)
Q Consensus 86 pg~f~-~h~~-----~dE~~yVLEG~v-~vt~dgg--------~~~~~i~a--GD~v~~PkG~~~tW~v~e~-vrK~Yv 146 (149)
+|..+ +|++ +..+++++.|++ .+.+|.. -..+++.+ +..++||+|+.|.+.+.+. ..-.|.
T Consensus 75 ~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vly~ 153 (225)
T 1upi_A 75 AGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYL 153 (225)
T ss_dssp TTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEE
T ss_pred CCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEEEe
Confidence 56553 4432 689999999996 6666653 13456666 5799999999999998765 333443
No 180
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=70.66 E-value=4.6 Score=33.74 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=22.1
Q ss_pred EEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 116 SFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 116 ~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
...++|||++++|.|+.|.=...+.
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEECCCCEEEeCCCCcEEEecCCC
Confidence 5789999999999999998877765
No 181
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=70.61 E-value=13 Score=29.22 Aligned_cols=54 Identities=11% Similarity=0.101 Sum_probs=37.9
Q ss_pred CCccc-ccc-CCCceEEEEEEeEEEEEE----CCcc-----eEEEEcCCcEEEEcCC--cEEEEEEc
Q 031987 85 PPSKF-PWT-FTATETMYLLEGKVIVYV----DGRE-----GSFEIGTGDLVVFPKG--MKITWDVI 138 (149)
Q Consensus 85 ~pg~f-~~h-~~~dE~~yVLEG~v~vt~----dgg~-----~~~~i~aGD~v~~PkG--~~~tW~v~ 138 (149)
.||.. +.| ....-++.||+|+.+-+. +++. +...+++||+++|..+ .-|+-+..
T Consensus 81 ~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~ 147 (211)
T 3uss_A 81 GPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNA 147 (211)
T ss_dssp CTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEES
T ss_pred CCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccC
Confidence 34443 333 337889999999998865 4431 2488999999999987 56766643
No 182
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=70.50 E-value=7.1 Score=32.26 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=32.9
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
.-.+|..-+. -..+.+++|++|.+.+..++.+....+++||.+-
T Consensus 365 ~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~~~~~~~l~~G~~fG 410 (469)
T 1o7f_A 365 HAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFG 410 (469)
T ss_dssp ECSTTCEEECTTSCCCEEEEEEESEEEEEETTTEEEEEEETTCEEC
T ss_pred EecCCCEEEeCCCcCCeEEEEEEeEEEEEEcCCeeEEEecCCCEEE
Confidence 3456665443 3468899999999999987653567899999773
No 183
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=69.82 E-value=3.7 Score=27.53 Aligned_cols=42 Identities=19% Similarity=0.307 Sum_probs=30.9
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
....+|..-++ -..+.+++|++|.+.+...+. ..+++||.+-
T Consensus 37 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~---~~~~~G~~~G 80 (138)
T 1vp6_A 37 RTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNP---VELGPGAFFG 80 (138)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEESCEEECSSSC---EEECTTCEEC
T ss_pred EEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCCc---ceECCCCEee
Confidence 45556665443 346889999999999987663 5899999864
No 184
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=69.22 E-value=9.2 Score=29.86 Aligned_cols=62 Identities=19% Similarity=0.252 Sum_probs=45.2
Q ss_pred CCcccc-ccC-CCceEEEEEE-eEE-EEEECCc-------ceEEEEcCCcEEEEcCCcEEEEEEcCc-eEEEEE
Q 031987 85 PPSKFP-WTF-TATETMYLLE-GKV-IVYVDGR-------EGSFEIGTGDLVVFPKGMKITWDVIEA-VNKHYS 146 (149)
Q Consensus 85 ~pg~f~-~h~-~~dE~~yVLE-G~v-~vt~dgg-------~~~~~i~aGD~v~~PkG~~~tW~v~e~-vrK~Yv 146 (149)
.+|..+ +|+ .+..+++++. |++ .+.+|.. -..+.+.++-.++||+|+.|.+.+.+. ..-.|.
T Consensus 68 ~~GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~ 141 (197)
T 1nxm_A 68 RKNVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDFVAYSYL 141 (197)
T ss_dssp ETTBEEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CCCCcceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEE
Confidence 356553 554 5899999999 994 6666552 256788899999999999999998765 333443
No 185
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=69.18 E-value=7.2 Score=27.10 Aligned_cols=45 Identities=9% Similarity=-0.075 Sum_probs=29.1
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEEC--Ccc-eEEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYVD--GRE-GSFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~d--gg~-~~~~i~aGD~v~ 126 (149)
-...+|..-.+ -..+.+++|++|.+.+..+ |.. ....+++||.+-
T Consensus 64 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~fG 113 (161)
T 3idb_B 64 KLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFG 113 (161)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEEC
T ss_pred eEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEec
Confidence 34455655443 3578899999999999752 321 123588999764
No 186
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=67.03 E-value=3.5 Score=28.72 Aligned_cols=25 Identities=16% Similarity=0.470 Sum_probs=20.2
Q ss_pred EEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 116 SFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 116 ~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
.-.++.||++++|+|....-...+.
T Consensus 7 ~~~l~~G~v~vVPq~~~v~~~A~~~ 31 (93)
T 1dgw_Y 7 AATLSEGDIIVIPSSFPVALKAASD 31 (93)
T ss_dssp EEEECTTCEEEECTTCCEEEEESSS
T ss_pred hceecCCcEEEECCCCceeEEecCC
Confidence 3579999999999999877666554
No 187
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=66.41 E-value=9 Score=25.67 Aligned_cols=45 Identities=13% Similarity=0.074 Sum_probs=29.3
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEEC--Ccce--EEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYVD--GREG--SFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~d--gg~~--~~~i~aGD~v~ 126 (149)
-...+|..-.. -..+.+++|++|.+.+... +|.+ ...+++||.+-
T Consensus 31 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 31 VTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIG 81 (149)
T ss_dssp EEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEES
T ss_pred EEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEec
Confidence 34455655433 2357899999999998752 3312 23688999874
No 188
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=65.79 E-value=8 Score=35.85 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=31.1
Q ss_pred CCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 85 PPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 85 ~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
..|+.-.. -..+.++.|++|++.|..++.+...++++||.|-
T Consensus 367 kaGtvI~rQGE~gds~YIIlsG~V~V~~~~~~~v~~L~~Gd~FG 410 (999)
T 4f7z_A 367 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFG 410 (999)
T ss_dssp STTCEEECTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEEC
T ss_pred cCCCEEEeCCCcCCeEEEEEeeEEEEEEcCCcceEEecCCCccc
Confidence 34554333 2367888999999999987654677899999985
No 189
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=65.77 E-value=12 Score=26.65 Aligned_cols=45 Identities=2% Similarity=-0.113 Sum_probs=30.0
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEE--CCcceE--EEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREGS--FEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~~--~~i~aGD~v~ 126 (149)
-...+|..-++ -..+.+++|++|.+++.. ++|.+. ..+++||.+-
T Consensus 33 ~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 33 KKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 34456665443 346889999999999875 344122 2478999986
No 190
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=65.26 E-value=14 Score=30.21 Aligned_cols=75 Identities=20% Similarity=0.167 Sum_probs=51.3
Q ss_pred eeeEEEeeCCChhhhhhcCCceee--eEecCCcccccc--CCCceEEEEE-EeEEEEEECCcceEEEEcCCcEEEEcCCc
Q 031987 57 IFGVKIEKNPPQSKLSELGVTSWP--KWGCPPSKFPWT--FTATETMYLL-EGKVIVYVDGREGSFEIGTGDLVVFPKGM 131 (149)
Q Consensus 57 ~~~V~i~~~ps~~~L~~lGv~~~g--iWe~~pg~f~~h--~~~dE~~yVL-EG~v~vt~dgg~~~~~i~aGD~v~~PkG~ 131 (149)
-.++++.|--+...+..+|....= ..-..+..|+.| .+-+=+-|++ +|+++=.+.-| ....++|||+=.+-+|.
T Consensus 19 G~G~~v~R~~~~~~~~~~gpf~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~DS~G-n~~~i~~GdvQwMtAG~ 97 (290)
T 1j1l_A 19 GVGARVRRSIGRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHEDFCG-HTGKMNPGDLQWMTAGR 97 (290)
T ss_dssp TBTEEEEECTTSTTCCCCTTEEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEEETTS-CEEEECTTCEEEEECTT
T ss_pred CCCeEEEEeCCCccccccCcEEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEeeCCC-CceEECCCcEEEEeCCC
Confidence 346777777766655555543210 111223358776 3445588999 99999999877 68999999999999985
Q ss_pred E
Q 031987 132 K 132 (149)
Q Consensus 132 ~ 132 (149)
-
T Consensus 98 G 98 (290)
T 1j1l_A 98 G 98 (290)
T ss_dssp C
T ss_pred C
Confidence 4
No 191
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=64.90 E-value=10 Score=30.67 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=53.5
Q ss_pred ccceeeeEEEeeCCChhhhhhcCCceee--eEecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEc
Q 031987 53 ATAEIFGVKIEKNPPQSKLSELGVTSWP--KWGCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFP 128 (149)
Q Consensus 53 ~~~~~~~V~i~~~ps~~~L~~lGv~~~g--iWe~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~P 128 (149)
++.+-.++++.|--+...+..+|....= .. .....|+.| .+-+=+-|+++|+++=.+.-| ....++|||+=.+-
T Consensus 15 ~~~~G~g~~v~R~~~~~~~~~~gpf~~ld~~~-~~~~gf~~HPHrg~EtVTyvl~G~~~H~DS~G-n~~~i~~GdvQwMt 92 (277)
T 2p17_A 15 MTTNSPIHRSGSVLEPGNWQEYDPFLLLMEDI-FERGTFDVHPHRGIETVTYVISGELEHFDSKA-GHSTLGPGDVQWMT 92 (277)
T ss_dssp EEEEETTEEEEEEECSSCHHHHTTEEEEEEEE-ECTTCCCCEEECSEEEEEEEEESCEEEEETTT-EEEEECTTCEEEEE
T ss_pred ecccCCCeEEeecCCcccccccCCEEEEecCC-CCCCCCCCCCCCCcEEEEEEEEeEEEEeeCCC-CceEECCCeEEEEe
Confidence 4445567777777666655555542211 11 123357665 345668899999999999877 78999999999999
Q ss_pred CCcE
Q 031987 129 KGMK 132 (149)
Q Consensus 129 kG~~ 132 (149)
+|.-
T Consensus 93 AG~G 96 (277)
T 2p17_A 93 AGRG 96 (277)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 9854
No 192
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=64.55 E-value=10 Score=27.72 Aligned_cols=48 Identities=15% Similarity=0.175 Sum_probs=31.1
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEE-CCcce--EEEEcCCcEEEEcCC
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYV-DGREG--SFEIGTGDLVVFPKG 130 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~-dgg~~--~~~i~aGD~v~~PkG 130 (149)
...+|..-.. -..+.+++|++|.+.+.. ++|.+ ...+++||++-.|..
T Consensus 31 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~~~~ 83 (220)
T 2fmy_A 31 RYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCTHTR 83 (220)
T ss_dssp EECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEESCSS
T ss_pred EeCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCCccc
Confidence 4445554433 346889999999999853 33412 235899999877443
No 193
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=64.26 E-value=5.3 Score=35.22 Aligned_cols=60 Identities=12% Similarity=0.065 Sum_probs=41.8
Q ss_pred eEecCCccc-cccCCCce---EEEEEEeEEEEEEC----------------------------CcceEEEEcCCcEEEEc
Q 031987 81 KWGCPPSKF-PWTFTATE---TMYLLEGKVIVYVD----------------------------GREGSFEIGTGDLVVFP 128 (149)
Q Consensus 81 iWe~~pg~f-~~h~~~dE---~~yVLEG~v~vt~d----------------------------gg~~~~~i~aGD~v~~P 128 (149)
.|-+.+|.+ ++|++... +..++.|+=++..- +..-..+++|||++++|
T Consensus 270 ~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIP 349 (488)
T 3kv5_D 270 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 349 (488)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeC
Confidence 566667776 46776443 56888998776531 01136789999999999
Q ss_pred CCcEEEEEEcCc
Q 031987 129 KGMKITWDVIEA 140 (149)
Q Consensus 129 kG~~~tW~v~e~ 140 (149)
.||.|.=...+.
T Consensus 350 sGWwH~V~nled 361 (488)
T 3kv5_D 350 TGWIHAVLTSQD 361 (488)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceEEeeCCCC
Confidence 999887665543
No 194
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=63.96 E-value=9.7 Score=27.28 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=29.3
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVVF 127 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~~ 127 (149)
...+|..-.+ -..+.+++|++|.+.+.. ++|.+ ...+++||++-.
T Consensus 17 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 67 (207)
T 2oz6_A 17 RYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGE 67 (207)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESC
T ss_pred EECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCccc
Confidence 3445554433 346789999999999984 33412 235889998843
No 195
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=63.80 E-value=8.9 Score=27.61 Aligned_cols=33 Identities=24% Similarity=0.061 Sum_probs=23.9
Q ss_pred CCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 94 TATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 94 ~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
..+.+++|++|.+.+.. ++|.+ ...+++||++-
T Consensus 16 ~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 16 EARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp BCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 46789999999999975 33312 23688999874
No 196
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=63.11 E-value=2 Score=29.03 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=28.5
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEEC-CcceE---E--EEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVD-GREGS---F--EIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~d-gg~~~---~--~i~aGD~v~ 126 (149)
...+|..-.. -..+.+++|++|.+++... +| .. . .+++||.+-
T Consensus 33 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g-~~~~~~~~~l~~G~~fG 83 (137)
T 1wgp_A 33 LFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGG-RSGFYNRSLLKEGDFCG 83 (137)
T ss_dssp CBCTTEEEECTTSBCSEEEEEEECCCEEECCSSC-SSSSSCEEECCTTCBSS
T ss_pred EeCCCCEEEeCCCCCCeEEEEEeeEEEEEEcCCC-cceeeeeeeecCCCEec
Confidence 4445554333 2467899999999998743 33 22 2 889999763
No 197
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=62.33 E-value=5 Score=32.92 Aligned_cols=20 Identities=25% Similarity=0.265 Sum_probs=17.8
Q ss_pred EEEEcCCcEEEEcCCcEEEE
Q 031987 116 SFEIGTGDLVVFPKGMKITW 135 (149)
Q Consensus 116 ~~~i~aGD~v~~PkG~~~tW 135 (149)
.+.+++||++++|+|..|..
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~ 178 (300)
T 1zx5_A 159 TFETTPYDTFVIRPGIPHAG 178 (300)
T ss_dssp EEECCTTCEEEECTTCCEEE
T ss_pred eeECCCCCEEEcCCCCceEc
Confidence 57899999999999998864
No 198
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=62.24 E-value=7.2 Score=26.41 Aligned_cols=45 Identities=13% Similarity=0.074 Sum_probs=29.3
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEEC--Ccc--eEEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYVD--GRE--GSFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~d--gg~--~~~~i~aGD~v~ 126 (149)
-...+|..-+. -..+.+++|++|.+.+... +|. ....+++||.+-
T Consensus 38 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 88 (154)
T 2z69_A 38 VNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 88 (154)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEES
T ss_pred EEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeec
Confidence 34556665443 3468899999999999853 231 134789999873
No 199
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=61.97 E-value=11 Score=27.18 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=37.7
Q ss_pred eeCCChhhhhhcCCceeeeEecCCcccccc--CCCceEEEEEEeEEEEEEC--Ccc--eEEEEcCCcEEE
Q 031987 63 EKNPPQSKLSELGVTSWPKWGCPPSKFPWT--FTATETMYLLEGKVIVYVD--GRE--GSFEIGTGDLVV 126 (149)
Q Consensus 63 ~~~ps~~~L~~lGv~~~giWe~~pg~f~~h--~~~dE~~yVLEG~v~vt~d--gg~--~~~~i~aGD~v~ 126 (149)
-.+.+...+.++-. ..-.-...+|..-.. -..+.+++|++|.+.+... +|. ....+++||.+-
T Consensus 47 f~~l~~~~l~~l~~-~~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fG 115 (187)
T 3gyd_A 47 FGDFSNEEVRYLCS-YMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIG 115 (187)
T ss_dssp SCCCCHHHHHHHHT-TCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEES
T ss_pred hhcCCHHHHHHHHH-hcEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeee
Confidence 33445555555421 122334456665443 3568899999999998763 331 233689999873
No 200
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=61.40 E-value=11 Score=26.95 Aligned_cols=44 Identities=18% Similarity=0.277 Sum_probs=29.1
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
...+|..-.. -..+.+++|++|.+.+.. ++|.+ ...+++||++-
T Consensus 23 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 23 KYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 3445554333 346889999999999974 33412 23479999884
No 201
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=61.20 E-value=12 Score=27.29 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=28.8
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
...+|..-.+ -..+.+++|++|.+.+.. ++|.+ ...+++||++-
T Consensus 33 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 82 (227)
T 3d0s_A 33 DFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFG 82 (227)
T ss_dssp EECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred EeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEe
Confidence 4445554333 346789999999999875 23312 22688999874
No 202
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=59.89 E-value=16 Score=26.92 Aligned_cols=45 Identities=9% Similarity=0.024 Sum_probs=29.8
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
-...+|..-.. -..+.+++|++|.+.+.. ++|.+ ...+++||++-
T Consensus 37 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 87 (237)
T 3fx3_A 37 RSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFG 87 (237)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEEC
T ss_pred EEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEec
Confidence 34455655433 346789999999999986 34412 23578999874
No 203
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=59.61 E-value=31 Score=24.96 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=37.0
Q ss_pred EEEeeCCChhhhhhcCCceeeeEecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 60 VKIEKNPPQSKLSELGVTSWPKWGCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 60 V~i~~~ps~~~L~~lGv~~~giWe~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
..+-.+-++..+..+-.. .-.-...+|..-.. -..+.+++|++|.+.+.. ++|.+ ...+++||.+-
T Consensus 16 ~~lf~~l~~~~~~~l~~~-~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 16 ATPSLTLDAGTIERFLAH-SHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp ------CCHHHHHHHHTT-SEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred cchhccCCHHHHHHHHHh-CeEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 333334556665554221 22344556665443 346889999999999875 23312 23589999885
No 204
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=57.63 E-value=17 Score=27.89 Aligned_cols=42 Identities=17% Similarity=0.171 Sum_probs=28.3
Q ss_pred CCcccccc--CCCceEEEEEEeEEEEEECC---cc--eEEEEcCCcEEE
Q 031987 85 PPSKFPWT--FTATETMYLLEGKVIVYVDG---RE--GSFEIGTGDLVV 126 (149)
Q Consensus 85 ~pg~f~~h--~~~dE~~yVLEG~v~vt~dg---g~--~~~~i~aGD~v~ 126 (149)
.+|..-.. -..+.+++|++|++.+...+ |. ....+++||.+-
T Consensus 186 ~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fG 234 (299)
T 3shr_A 186 ENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFG 234 (299)
T ss_dssp CTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEEC
T ss_pred CCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeC
Confidence 44544332 23578999999999998754 21 234689999874
No 205
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=57.60 E-value=8.4 Score=33.25 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=39.8
Q ss_pred eEecCCccc-cccCCCc---eEEEEEEeEEEEEE-----------------------------CCcceEEEEcCCcEEEE
Q 031987 81 KWGCPPSKF-PWTFTAT---ETMYLLEGKVIVYV-----------------------------DGREGSFEIGTGDLVVF 127 (149)
Q Consensus 81 iWe~~pg~f-~~h~~~d---E~~yVLEG~v~vt~-----------------------------dgg~~~~~i~aGD~v~~ 127 (149)
.|-+..|.+ ++|.+.. =..+++.|+=.+.. +.+ -...++|||++++
T Consensus 178 ~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~-~ev~l~pGEtlfI 256 (392)
T 3pua_A 178 CLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKC-YKCIVKQGQTLFI 256 (392)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCC-EEEEEETTCEEEE
T ss_pred EEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccce-EEEEECCCcEEee
Confidence 445555555 4666533 36678888877653 122 4688999999999
Q ss_pred cCCcEEEEEEcCc
Q 031987 128 PKGMKITWDVIEA 140 (149)
Q Consensus 128 PkG~~~tW~v~e~ 140 (149)
|.||.|.=...+.
T Consensus 257 PsGWwH~V~nled 269 (392)
T 3pua_A 257 PSGWIYATLTPVD 269 (392)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCceEEEecCCC
Confidence 9999876655443
No 206
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=57.31 E-value=39 Score=24.52 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=34.3
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEE-CCcce--EEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYV-DGREG--SFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~-dgg~~--~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
-...+|..-.. -..+.+++|++|.+.+.. ++|.+ ...+++||++- .....+-...++
T Consensus 26 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~~ 87 (222)
T 1ft9_A 26 KIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC--MHSGCLVEATER 87 (222)
T ss_dssp EEECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE--SCSSCEEEESSC
T ss_pred EEECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec--CCCCEEEEEccc
Confidence 34445554332 346789999999999853 23312 23589999987 333344444444
No 207
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=57.24 E-value=4.7 Score=33.12 Aligned_cols=43 Identities=19% Similarity=0.125 Sum_probs=32.5
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
...+|..-.+ -..+.+++|++|.+.+..+|. ....+++||.+-
T Consensus 157 ~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~-~v~~l~~G~~fG 201 (381)
T 4din_B 157 THIAGETVIQQGNEGDNFYVVDQGEVDVYVNGE-WVTNISEGGSFG 201 (381)
T ss_dssp ECCTTCBSSCTTSBCCEEEECSSSEEEEEETTE-EEEEEESSCCBC
T ss_pred EECCCCEEEeCCCCCCeEEEEEeeEEEEEECCe-EeeeCCCCCEEE
Confidence 3445554433 346889999999999999877 777899999864
No 208
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=57.21 E-value=13 Score=27.62 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=29.4
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEE--CCcceE--EEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREGS--FEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~~--~~i~aGD~v~ 126 (149)
-...+|..-.. -..+.+++|++|.+.+.. ++|.+. ..+++||++-
T Consensus 46 ~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG 96 (232)
T 1zyb_A 46 IKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIE 96 (232)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEEC
T ss_pred EEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeee
Confidence 44456665443 346789999999999974 233122 3578999874
No 209
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=57.06 E-value=8.6 Score=33.20 Aligned_cols=26 Identities=12% Similarity=0.075 Sum_probs=21.2
Q ss_pred eEEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 115 GSFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 115 ~~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
-...++|||++++|.|+.|.-...+.
T Consensus 245 ~~v~l~pGe~lfIPsGW~H~V~nled 270 (397)
T 3kv9_A 245 YKCVVKQGHTLFVPTGWIHAVLTSQD 270 (397)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEEECCCCEEEeCCCCeEEccCCcC
Confidence 46789999999999999887665543
No 210
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=57.02 E-value=26 Score=27.30 Aligned_cols=57 Identities=18% Similarity=0.218 Sum_probs=45.4
Q ss_pred CccccccCCCceEEEEEEeE-EEEEECCcceEEEE-cCCcEEEEcCCcEEEEEEc-CceEEE
Q 031987 86 PSKFPWTFTATETMYLLEGK-VIVYVDGREGSFEI-GTGDLVVFPKGMKITWDVI-EAVNKH 144 (149)
Q Consensus 86 pg~f~~h~~~dE~~yVLEG~-v~vt~dgg~~~~~i-~aGD~v~~PkG~~~tW~v~-e~vrK~ 144 (149)
.|.|...-.+|=++.+|+|. ++++.++. ... + .+++.+.|+.++...-+.. .+++-+
T Consensus 52 ~g~FS~FpGidR~i~lL~G~g~~L~~~~~-~~~-L~~~~~p~~F~G~~~v~a~L~~G~~~Df 111 (200)
T 1yll_A 52 SGGFSGFAGYQRIISVLEGGGMRLRVDGA-ESA-PLRARQAFAFSGDSEVHCTLLDGAIRDF 111 (200)
T ss_dssp CEEECCCTTCEEEEEEEESSCEEEEETTE-ECC-CBCBTCCEEEETTSCEEEEESSSCEEEE
T ss_pred CCCCCCCCCccEEEEEEeCCcEEEecCCC-ccc-cCCCCCcEEeCCCCcEEEEECCCCEEEE
Confidence 55666656799999999998 99999988 445 7 9999999999999888755 445443
No 211
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=55.86 E-value=18 Score=26.03 Aligned_cols=44 Identities=20% Similarity=0.199 Sum_probs=29.5
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
...+|..-.+ -..+.+++|++|.+.+.. ++|.+ ...+++||.+-
T Consensus 26 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 26 LYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFG 75 (216)
T ss_dssp EECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEEC
T ss_pred EeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 4455654333 346889999999999985 33412 24589999874
No 212
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=55.57 E-value=17 Score=26.53 Aligned_cols=45 Identities=22% Similarity=0.324 Sum_probs=29.1
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEE---CCcc-eEEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYV---DGRE-GSFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~---dgg~-~~~~i~aGD~v~ 126 (149)
-...+|..-.+ -..+.+++|++|.+.+.. +|.+ ....+++||.+-
T Consensus 36 ~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 86 (232)
T 2gau_A 36 FPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFG 86 (232)
T ss_dssp EEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEES
T ss_pred EEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEee
Confidence 34556665433 346789999999999974 2321 234689999873
No 213
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=55.43 E-value=8.7 Score=32.74 Aligned_cols=20 Identities=5% Similarity=0.197 Sum_probs=17.9
Q ss_pred EEEEcCCcEEEEcCCcEEEE
Q 031987 116 SFEIGTGDLVVFPKGMKITW 135 (149)
Q Consensus 116 ~~~i~aGD~v~~PkG~~~tW 135 (149)
.+.+++||++++|+|..|..
T Consensus 241 ~v~l~pGd~~fipAG~~HAy 260 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAY 260 (394)
T ss_dssp EEEECTTCEEEECTTCCEEE
T ss_pred EEECCCCCEEEcCCCCceEc
Confidence 57799999999999998875
No 214
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=54.83 E-value=18 Score=26.09 Aligned_cols=44 Identities=11% Similarity=0.223 Sum_probs=29.2
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEE--CCcceE--EEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREGS--FEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~~--~~i~aGD~v~ 126 (149)
...+|..-.+ -..+.+++|++|.+.+.. ++|.+. ..+++||.+.
T Consensus 30 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~ 79 (220)
T 3dv8_A 30 HVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCL 79 (220)
T ss_dssp EECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred EeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeee
Confidence 4455654332 356889999999999985 344122 3578999963
No 215
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=53.47 E-value=18 Score=27.51 Aligned_cols=45 Identities=18% Similarity=0.265 Sum_probs=30.3
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
-...+|..-.. -..+.+++|++|.+.+.. ++|.+ ...+++||++-
T Consensus 72 ~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 72 HKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp EEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 34556665443 346889999999999984 33412 33589999884
No 216
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=53.46 E-value=22 Score=26.35 Aligned_cols=44 Identities=9% Similarity=0.192 Sum_probs=27.2
Q ss_pred CCcccccc--CCCceEEEEEEeEEEEEE--CCcce-EEEEcCCcEEEEc
Q 031987 85 PPSKFPWT--FTATETMYLLEGKVIVYV--DGREG-SFEIGTGDLVVFP 128 (149)
Q Consensus 85 ~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~-~~~i~aGD~v~~P 128 (149)
.+|..-++ -..+.+++|++|.+.+.. ++|.+ ...+.+||++-..
T Consensus 24 ~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~ 72 (238)
T 2bgc_A 24 HKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMS 72 (238)
T ss_dssp ETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEES
T ss_pred CCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecch
Confidence 34544332 346789999999999875 33312 2333399988543
No 217
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=50.70 E-value=22 Score=30.85 Aligned_cols=25 Identities=20% Similarity=0.247 Sum_probs=20.7
Q ss_pred EEEEcCCcEEEEcCCcEEEEEEcCc
Q 031987 116 SFEIGTGDLVVFPKGMKITWDVIEA 140 (149)
Q Consensus 116 ~~~i~aGD~v~~PkG~~~tW~v~e~ 140 (149)
.+.-++||+|+||+|+.|+=.....
T Consensus 294 ~~~Q~~GeavfiPaG~~HQV~Nl~~ 318 (392)
T 2ypd_A 294 TLIQFLGDAIVLPAGALHQVQNFHS 318 (392)
T ss_dssp EEEEETTCEEEECTTCEEEEEESSE
T ss_pred EEEEcCCCEEEecCCCHHHHhcccc
Confidence 5566899999999999998766654
No 218
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=50.08 E-value=18 Score=25.99 Aligned_cols=31 Identities=16% Similarity=0.163 Sum_probs=22.5
Q ss_pred ceEEEEEEeEEEEEE--CCcceE--EEEcCCcEEE
Q 031987 96 TETMYLLEGKVIVYV--DGREGS--FEIGTGDLVV 126 (149)
Q Consensus 96 dE~~yVLEG~v~vt~--dgg~~~--~~i~aGD~v~ 126 (149)
+.+++|++|.+.+.. ++|.+. ..+++||++-
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 60 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFG 60 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEee
Confidence 778999999999874 334122 2588999874
No 219
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=49.55 E-value=25 Score=26.67 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=24.6
Q ss_pred CCceEEEEEEeEEEEEE---CCcc--eEEEEcCCcEEE
Q 031987 94 TATETMYLLEGKVIVYV---DGRE--GSFEIGTGDLVV 126 (149)
Q Consensus 94 ~~dE~~yVLEG~v~vt~---dgg~--~~~~i~aGD~v~ 126 (149)
..+.+++|++|++.+.. +|+. ....+++||.+-
T Consensus 197 ~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fG 234 (291)
T 2qcs_B 197 PGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFG 234 (291)
T ss_dssp CCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEEC
T ss_pred cCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEec
Confidence 46889999999999974 2321 245799999885
No 220
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=48.41 E-value=14 Score=33.19 Aligned_cols=24 Identities=17% Similarity=0.136 Sum_probs=19.8
Q ss_pred EEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 116 SFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 116 ~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
...++|||++++|.||.|.-...+
T Consensus 367 ~v~l~pGEtlfIPsGW~HaV~tle 390 (528)
T 3pur_A 367 RVVIKEGQTLLIPAGWIHAVLTPV 390 (528)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEE
T ss_pred EEEECCCCEEEecCCceEEEecCC
Confidence 578999999999999987655543
No 221
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=47.51 E-value=27 Score=28.45 Aligned_cols=41 Identities=20% Similarity=0.253 Sum_probs=26.8
Q ss_pred CCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEEEE
Q 031987 94 TATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKITWD 136 (149)
Q Consensus 94 ~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~ 136 (149)
...=++||++|++++..++. ...+.++.++++..|-..+-+
T Consensus 189 ~~~~~lyv~~G~v~v~g~~~--~~~~~~~~~~~l~~gd~~~i~ 229 (290)
T 1j1l_A 189 GWTSFIYTISGDVYIGPDDA--QQKIEPHHTAVLGEGDSVQVE 229 (290)
T ss_dssp TCEEEEEEEESCEEESCTTS--CEEECTTEEEEECSCSEEEEE
T ss_pred CCEEEEEEEeCeEEECCccc--ceeccCceEEEecCCCEEEEE
Confidence 46778999999998843221 245666666666666555544
No 222
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=45.65 E-value=15 Score=31.80 Aligned_cols=21 Identities=5% Similarity=0.123 Sum_probs=18.1
Q ss_pred EEEEcCCcEEEEcCCcEEEEE
Q 031987 116 SFEIGTGDLVVFPKGMKITWD 136 (149)
Q Consensus 116 ~~~i~aGD~v~~PkG~~~tW~ 136 (149)
.+.++|||++++|+|..|-+-
T Consensus 267 ~v~L~pGea~flpAg~~HAYl 287 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYI 287 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEE
T ss_pred eEecCCCCEEecCCCCccccC
Confidence 467999999999999988753
No 223
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=44.55 E-value=21 Score=26.05 Aligned_cols=44 Identities=14% Similarity=0.078 Sum_probs=28.4
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEE--CCcceE--EEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREGS--FEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~~--~~i~aGD~v~ 126 (149)
...+|..-.+ -..+.+++|++|.+.+.. ++|.+. ..+++||++-
T Consensus 26 ~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 75 (213)
T 1o5l_A 26 VFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIA 75 (213)
T ss_dssp EECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESS
T ss_pred EECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEee
Confidence 4445554433 245789999999999874 344122 3588999873
No 224
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=44.43 E-value=25 Score=27.47 Aligned_cols=43 Identities=12% Similarity=-0.047 Sum_probs=29.0
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEEC--Ccc-eEEEEcCCcEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVD--GRE-GSFEIGTGDLV 125 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~d--gg~-~~~~i~aGD~v 125 (149)
...+|..-.+ -..+.+++|++|.+.+... +|. ....+++||.+
T Consensus 40 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 40 RAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp EECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred EECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 3445655443 3468899999999999753 221 24468999987
No 225
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=43.35 E-value=68 Score=26.16 Aligned_cols=37 Identities=30% Similarity=0.525 Sum_probs=25.6
Q ss_pred eEEEE-EE---eEEE--EEECC--cceEEEEcCCcEEEEcCCcEEE
Q 031987 97 ETMYL-LE---GKVI--VYVDG--REGSFEIGTGDLVVFPKGMKIT 134 (149)
Q Consensus 97 E~~yV-LE---G~v~--vt~dg--g~~~~~i~aGD~v~~PkG~~~t 134 (149)
|+.|. +. |-+- +..++ .++...++-||+|.+|+|. |-
T Consensus 186 E~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-Hp 230 (270)
T 2qjv_A 186 ETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-HP 230 (270)
T ss_dssp EEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-CC
T ss_pred eEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-CC
Confidence 99877 54 2222 22222 2368999999999999999 65
No 226
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=42.34 E-value=33 Score=25.54 Aligned_cols=45 Identities=16% Similarity=0.084 Sum_probs=29.6
Q ss_pred EecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 82 WGCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 82 We~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
-...+|..-.. -..+.+++|++|.+.+.. ++|.+ ...+++||++-
T Consensus 46 ~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 46 ETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred EEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 34456665443 346789999999999975 33312 23589999874
No 227
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=41.91 E-value=20 Score=26.19 Aligned_cols=44 Identities=16% Similarity=0.040 Sum_probs=28.7
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
...+|..-.. -..+.+++|++|.+.+.. ++|.+ ...+++||++-
T Consensus 33 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 33 NFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp EECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred EECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 4455554333 346889999999999875 23312 24689999874
No 228
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=41.25 E-value=36 Score=30.81 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=32.5
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEECCcceEEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVDGREGSFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~ 126 (149)
...+|..-.. -..+.+++|++|.+++...|......+++||.+-
T Consensus 60 ~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~~g~~il~~l~~Gd~fG 105 (694)
T 3cf6_E 60 HAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFG 105 (694)
T ss_dssp ECSTTCEEECTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEEC
T ss_pred EECCCCEEECCCCcCCeEEEEEEEEEEEEEeCCEEEEEeCCCCEee
Confidence 4566766443 3468899999999999887653456799999763
No 229
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=40.99 E-value=33 Score=25.48 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=28.9
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEE--CCcce--EEEEcCCcEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYV--DGREG--SFEIGTGDLVV 126 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~--dgg~~--~~~i~aGD~v~ 126 (149)
...+|..-.. -..+.+++|++|.+.+.. ++|.+ ...+++||++-
T Consensus 36 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 36 DFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp EECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred EECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 4445554332 346889999999999875 34412 22488999884
No 230
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=39.52 E-value=40 Score=27.95 Aligned_cols=32 Identities=13% Similarity=0.086 Sum_probs=23.5
Q ss_pred CCceEEEEEEeEEEEEECCc----------ceEEEEcCCcEE
Q 031987 94 TATETMYLLEGKVIVYVDGR----------EGSFEIGTGDLV 125 (149)
Q Consensus 94 ~~dE~~yVLEG~v~vt~dgg----------~~~~~i~aGD~v 125 (149)
..+.+++|++|++.+...+. .....+++||.+
T Consensus 307 ~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 307 LADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred cCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 46889999999999986432 024568999977
No 231
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=38.72 E-value=35 Score=28.33 Aligned_cols=42 Identities=10% Similarity=-0.002 Sum_probs=27.7
Q ss_pred CCcccccc--CCCceEEEEEEeEEEEEEC-Ccce--EEEEcCCcEEE
Q 031987 85 PPSKFPWT--FTATETMYLLEGKVIVYVD-GREG--SFEIGTGDLVV 126 (149)
Q Consensus 85 ~pg~f~~h--~~~dE~~yVLEG~v~vt~d-gg~~--~~~i~aGD~v~ 126 (149)
.+|..-.. -..+.+++|++|.+.+..+ +|.+ ...+++||++-
T Consensus 174 ~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fG 220 (416)
T 3tnp_B 174 KEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFG 220 (416)
T ss_dssp CTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEESCCEEC
T ss_pred CCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEe
Confidence 45554333 3468899999999998763 3312 33589999764
No 232
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=37.48 E-value=1.4e+02 Score=23.14 Aligned_cols=63 Identities=11% Similarity=0.091 Sum_probs=43.8
Q ss_pred CCcccc-ccC-----CCceEEEEEEeEE-EEEECCcc--------eEEEEcC--CcEEEEcCCcEEEEEEcCc-eEEEEE
Q 031987 85 PPSKFP-WTF-----TATETMYLLEGKV-IVYVDGRE--------GSFEIGT--GDLVVFPKGMKITWDVIEA-VNKHYS 146 (149)
Q Consensus 85 ~pg~f~-~h~-----~~dE~~yVLEG~v-~vt~dgg~--------~~~~i~a--GD~v~~PkG~~~tW~v~e~-vrK~Yv 146 (149)
.+|..+ +|+ .+..+++++.|++ .+.+|-.. ..+++.+ +-.++||+|+.|-+.+.+. ..-.|.
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~ 131 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFL 131 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEe
Confidence 356653 443 4799999999995 44555321 2456665 7899999999999999765 444565
Q ss_pred e
Q 031987 147 L 147 (149)
Q Consensus 147 i 147 (149)
.
T Consensus 132 ~ 132 (201)
T 4hn1_A 132 C 132 (201)
T ss_dssp E
T ss_pred C
Confidence 4
No 233
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=36.47 E-value=5.6 Score=27.94 Aligned_cols=18 Identities=28% Similarity=0.791 Sum_probs=13.9
Q ss_pred EEEEcCCcEEEEcCCcEE
Q 031987 116 SFEIGTGDLVVFPKGMKI 133 (149)
Q Consensus 116 ~~~i~aGD~v~~PkG~~~ 133 (149)
+..++.||.|.|++|+.+
T Consensus 56 p~~VkvGD~Vlf~k~y~G 73 (97)
T 1pcq_O 56 PLDVKVGDIVIFNDGYGV 73 (97)
T ss_dssp ECSCCTTCEEEECCCSSC
T ss_pred ecccCCCCEEEECCccCC
Confidence 456999999999994443
No 234
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=36.13 E-value=44 Score=27.40 Aligned_cols=45 Identities=16% Similarity=0.032 Sum_probs=30.5
Q ss_pred ecCCcccccc--CCCceEEEEEEeEEEEEECC--c----ceEEEEcCCcEEEE
Q 031987 83 GCPPSKFPWT--FTATETMYLLEGKVIVYVDG--R----EGSFEIGTGDLVVF 127 (149)
Q Consensus 83 e~~pg~f~~h--~~~dE~~yVLEG~v~vt~dg--g----~~~~~i~aGD~v~~ 127 (149)
...+|..-.+ -..+.+++|++|.+.+...+ | .....+++||++--
T Consensus 69 ~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 69 NLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred EECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 4456655443 34688999999999997642 2 13457899998753
No 235
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=35.98 E-value=56 Score=24.28 Aligned_cols=41 Identities=22% Similarity=0.364 Sum_probs=27.9
Q ss_pred CCceEEEEEEe-EEEEEECCcceEEEEcCCcEEEEcCCcEEEEEEcC
Q 031987 94 TATETMYLLEG-KVIVYVDGREGSFEIGTGDLVVFPKGMKITWDVIE 139 (149)
Q Consensus 94 ~~dE~~yVLEG-~v~vt~dgg~~~~~i~aGD~v~~PkG~~~tW~v~e 139 (149)
..+=-+++.+| +......+. +++||.+.+|+|....|+-..
T Consensus 100 T~~Hp~~v~~~g~~~w~~A~e-----Lk~GD~v~~~~~~~~~~~~V~ 141 (186)
T 2jmz_A 100 THDHPVYISKTGEVLEINAEM-----VKVGDYIYIPKNNTINLDEVI 141 (186)
T ss_dssp CTTCEEEEEETTEEEEEEGGG-----CCTTSEEEEECSSSEEEEECC
T ss_pred eCCCEEEEeCCCeEEEEEhhc-----CCCCCEEEecccCCccceEEE
Confidence 44445666654 444444444 899999999999889996433
No 236
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=33.77 E-value=76 Score=27.50 Aligned_cols=45 Identities=18% Similarity=0.178 Sum_probs=37.5
Q ss_pred EEEEeEEEEEEC--CcceEEEEcCCcEEEEcCCcEEEEEEcCceEEE
Q 031987 100 YLLEGKVIVYVD--GREGSFEIGTGDLVVFPKGMKITWDVIEAVNKH 144 (149)
Q Consensus 100 yVLEG~v~vt~d--gg~~~~~i~aGD~v~~PkG~~~tW~v~e~vrK~ 144 (149)
.|.+|++++.=+ +|.....++|+|+.++-+=+.|.|+=...+-|+
T Consensus 359 ~v~~G~lTL~W~~~dGt~~a~L~PDgSAwv~PFV~H~w~G~GtVlkL 405 (443)
T 3g7d_A 359 VVTEGRLTLEWDGPDGPASVELEPDGSAWTGPFVRHRWHGTGTVLKF 405 (443)
T ss_dssp EEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEESSEEEEEE
T ss_pred EEecCceEEEecCCCCccceEECCCCceeecccccccccCCceEEEe
Confidence 389999999765 343567899999999999999999988887775
No 237
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=33.72 E-value=20 Score=25.91 Aligned_cols=46 Identities=13% Similarity=0.057 Sum_probs=30.3
Q ss_pred eEecCCcccccc--CCCceEEEEEEeEEEEEEC--Ccc--eEEEEcCCcEEE
Q 031987 81 KWGCPPSKFPWT--FTATETMYLLEGKVIVYVD--GRE--GSFEIGTGDLVV 126 (149)
Q Consensus 81 iWe~~pg~f~~h--~~~dE~~yVLEG~v~vt~d--gg~--~~~~i~aGD~v~ 126 (149)
.-...+|..-.. -..+.+++|++|.+.+... +|. ....+++||.+-
T Consensus 34 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 34 LVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 85 (227)
T ss_dssp EEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEES
T ss_pred EEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 345556665443 3468899999999999753 231 123588999875
No 238
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=33.03 E-value=48 Score=26.97 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=24.5
Q ss_pred CCceEEEEEEeEEEEEECC--cc---eEEEEcCCcEE
Q 031987 94 TATETMYLLEGKVIVYVDG--RE---GSFEIGTGDLV 125 (149)
Q Consensus 94 ~~dE~~yVLEG~v~vt~dg--g~---~~~~i~aGD~v 125 (149)
..+.+++|++|++.+...+ ++ ....+++||.+
T Consensus 288 ~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 288 PGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp BCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred cCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 4688999999999998742 21 24579999987
No 239
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=29.21 E-value=77 Score=29.27 Aligned_cols=42 Identities=17% Similarity=0.085 Sum_probs=28.6
Q ss_pred cCCcccccc--CCCceEEEEEEeEEEEEECC------cceEEEEcCCcEE
Q 031987 84 CPPSKFPWT--FTATETMYLLEGKVIVYVDG------REGSFEIGTGDLV 125 (149)
Q Consensus 84 ~~pg~f~~h--~~~dE~~yVLEG~v~vt~dg------g~~~~~i~aGD~v 125 (149)
..+|..-.. -..+.++.|++|++.|...+ +....++++||+|
T Consensus 70 ~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 70 LEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp ECTTCEEECTTSCCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred ECCCCEEEcCCCcCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 345554433 35788999999999998742 1123579999987
No 240
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=28.27 E-value=47 Score=26.38 Aligned_cols=31 Identities=19% Similarity=0.419 Sum_probs=22.1
Q ss_pred eEEEEEECCcceEEEEcCCcEEEEcCCcEEE
Q 031987 104 GKVIVYVDGREGSFEIGTGDLVVFPKGMKIT 134 (149)
Q Consensus 104 G~v~vt~dgg~~~~~i~aGD~v~~PkG~~~t 134 (149)
|+..+...+++..+.-++|++++||.+..|.
T Consensus 147 Getvf~~~~~~~~V~P~~G~~v~F~s~~lH~ 177 (243)
T 3dkq_A 147 GELVIQDTYGQQSIKLSAGSLVLYPSSSLHQ 177 (243)
T ss_dssp CCEEEEETTEEEEECCCTTCEEEEETTSEEE
T ss_pred ceEEEeeCCCcEEEecCCCEEEEECCCCeEc
Confidence 6666666544356677899999999986543
No 241
>3anw_A GINS51, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=27.10 E-value=18 Score=27.72 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=23.1
Q ss_pred eEEEEEEeEEEEEECCcceEEE-EcCCcEEEEcC
Q 031987 97 ETMYLLEGKVIVYVDGREGSFE-IGTGDLVVFPK 129 (149)
Q Consensus 97 E~~yVLEG~v~vt~dgg~~~~~-i~aGD~v~~Pk 129 (149)
|.++|++.--.+...++ ..+. +++||+|.+|+
T Consensus 137 e~~~v~~d~p~i~~~d~-r~Y~Pl~~~Dvv~LP~ 169 (188)
T 3anw_A 137 EAYIIQIDLPAVLGPDM-KEYGPFMAGDMAIIPT 169 (188)
T ss_dssp EEEEECSCBCCEECTTS-CEECCBCTTCEEEEEH
T ss_pred cceEEEeCCCceecCCc-CcccCCCcccEEeecH
Confidence 44445555556666665 6888 99999999996
No 242
>3tdq_A PILY2 protein; fimbiria, cell adhesion, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.10A {Pseudomonas aeruginosa}
Probab=21.05 E-value=56 Score=22.93 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=25.7
Q ss_pred ccccCCccccceeeeEEEeeCCChhhhhhc
Q 031987 45 ASTTTTTAATAEIFGVKIEKNPPQSKLSEL 74 (149)
Q Consensus 45 ~~~~~~~~~~~~~~~V~i~~~ps~~~L~~l 74 (149)
.-|+++..+..++..|.|.|++++.+|.+|
T Consensus 54 S~sGsvssp~p~I~siyilrQ~s~~e~~~~ 83 (98)
T 3tdq_A 54 SYSGTVSQPWSTITDIYIHKQMSEQELAEM 83 (98)
T ss_dssp EEEEECCSSSCEEEEEEECCTTSEEHHHHH
T ss_pred EEeeeecCCCccceEEEEEecCCHHHHHHH
Confidence 446777888889999999999999999776
No 243
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=20.59 E-value=1.1e+02 Score=19.42 Aligned_cols=14 Identities=7% Similarity=0.152 Sum_probs=5.9
Q ss_pred EEEcCCcEEEEEEc
Q 031987 125 VVFPKGMKITWDVI 138 (149)
Q Consensus 125 v~~PkG~~~tW~v~ 138 (149)
+.+++|.+.+|...
T Consensus 20 i~v~~G~~V~~~n~ 33 (98)
T 2plt_A 20 LTIKSGETVNFVNN 33 (98)
T ss_dssp EEECTTCEEEEEEC
T ss_pred EEECCCCEEEEEEC
Confidence 33444444444433
No 244
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=20.12 E-value=2.9e+02 Score=20.93 Aligned_cols=55 Identities=15% Similarity=0.173 Sum_probs=34.5
Q ss_pred EecCCccc-ccc-CCCceEEEEEEeEE-EEEE--CCc-ceEEEEc----CCc---EEEEcCCcEEEEE
Q 031987 82 WGCPPSKF-PWT-FTATETMYLLEGKV-IVYV--DGR-EGSFEIG----TGD---LVVFPKGMKITWD 136 (149)
Q Consensus 82 We~~pg~f-~~h-~~~dE~~yVLEG~v-~vt~--dgg-~~~~~i~----aGD---~v~~PkG~~~tW~ 136 (149)
+=.+++.+ +|| ...||+-|...|.- ++.. +|| -+...++ +|+ .+++|+|..-.=+
T Consensus 58 fLL~~~~~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~ 125 (172)
T 3loi_A 58 YLMQAGQPDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQE 125 (172)
T ss_dssp EEEETTCCEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEE
T ss_pred EEEcCCCCccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEE
Confidence 44444554 577 57899999999953 4443 444 1334454 577 7899999764433
No 245
>4db5_A Tumor necrosis factor ligand superfamily member 1; gitrl, glucocorticoid-induced TNF receptor ligand, immune SY tnfrsf18; HET: B3P; 1.52A {Oryctolagus cuniculus} PDB: 4e4s_A 2r30_A 3b93_A 3b94_A 2q1m_A
Probab=20.07 E-value=48 Score=24.37 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=13.8
Q ss_pred ECCcceEEEEcCCcEEEEc
Q 031987 110 VDGREGSFEIGTGDLVVFP 128 (149)
Q Consensus 110 ~dgg~~~~~i~aGD~v~~P 128 (149)
.-|| .+++.+||.+++-
T Consensus 83 ~lGG--vfeL~~GD~Ifv~ 99 (125)
T 4db5_A 83 NLGG--IYEFDAGDIIELR 99 (125)
T ss_dssp EEEE--EEEECTTCEEEEE
T ss_pred eccc--EEEecCCCEEEEE
Confidence 3466 8999999999874
No 246
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=20.02 E-value=17 Score=26.85 Aligned_cols=39 Identities=18% Similarity=0.202 Sum_probs=26.0
Q ss_pred cCCCceEEEEEEeEEEEEECCcceEEEEcCCcEEEEcCCcEEE
Q 031987 92 TFTATETMYLLEGKVIVYVDGREGSFEIGTGDLVVFPKGMKIT 134 (149)
Q Consensus 92 h~~~dE~~yVLEG~v~vt~dgg~~~~~i~aGD~v~~PkG~~~t 134 (149)
+|. +|+++-+.-. +..+++ ......+||+.++|.|-...
T Consensus 50 ~~g-~E~y~~~p~~--l~~~e~-~~~~~~~GDIaYw~pgg~La 88 (136)
T 1zx8_A 50 TWG-EEIYFSTPVN--VQKMEN-PREVVEIGDVGYWPPGKALC 88 (136)
T ss_dssp ESS-SEEEEECSCC--CCCCSS-EESSBCTTEEEEEGGGTEEE
T ss_pred HhC-CcEEEECCcc--CCCCCC-CCccCCCCcEEEeCCCCEEE
Confidence 355 7877765533 343333 46779999999999976543
Done!