BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 031989
         (149 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
           (Crystal Form 1)
 pdb|4G22|B Chain B, Structure Of A Lys-Hct Mutant From Coffea Canephora
           (Crystal Form 1)
          Length = 439

 Score =  234 bits (597), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 110/140 (78%), Positives = 124/140 (88%)

Query: 1   MIINVKESTMVRPAAETPRVALWNANVDLVVPRFHTPSVYFYRPTGAANFFDAGVLKDAL 60
           M I VKESTMVRPA ETP   LWN+NVDLVVP FHTPSVYFYRPTG++NFFDA VLKDAL
Sbjct: 6   MKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDAL 65

Query: 61  SKALVPFYPMAGRLKRDDDGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTLELKQLIPT 120
           S+ALVPFYPMAGRLKRD+DGRIEI+CN EGVLFVEAE+  ++DDFGDFAPTLEL++LIP 
Sbjct: 66  SRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPA 125

Query: 121 IDYSGGISTYPLLVLQVCLY 140
           +DYS GIS+Y LLVLQV  +
Sbjct: 126 VDYSQGISSYALLVLQVTYF 145


>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
           (Crystal Form 2)
          Length = 439

 Score =  234 bits (597), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 110/140 (78%), Positives = 124/140 (88%)

Query: 1   MIINVKESTMVRPAAETPRVALWNANVDLVVPRFHTPSVYFYRPTGAANFFDAGVLKDAL 60
           M I VKESTMVRPA ETP   LWN+NVDLVVP FHTPSVYFYRPTG++NFFDA VLKDAL
Sbjct: 6   MKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDAL 65

Query: 61  SKALVPFYPMAGRLKRDDDGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTLELKQLIPT 120
           S+ALVPFYPMAGRLKRD+DGRIEI+CN EGVLFVEAE+  ++DDFGDFAPTLEL++LIP 
Sbjct: 66  SRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPA 125

Query: 121 IDYSGGISTYPLLVLQVCLY 140
           +DYS GIS+Y LLVLQV  +
Sbjct: 126 VDYSQGISSYALLVLQVTYF 145


>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora
 pdb|4G0B|B Chain B, Structure Of Native Hct From Coffea Canephora
          Length = 436

 Score =  234 bits (597), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 110/140 (78%), Positives = 124/140 (88%)

Query: 1   MIINVKESTMVRPAAETPRVALWNANVDLVVPRFHTPSVYFYRPTGAANFFDAGVLKDAL 60
           M I VKESTMVRPA ETP   LWN+NVDLVVP FHTPSVYFYRPTG++NFFDA VLKDAL
Sbjct: 3   MKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDAL 62

Query: 61  SKALVPFYPMAGRLKRDDDGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTLELKQLIPT 120
           S+ALVPFYPMAGRLKRD+DGRIEI+CN EGVLFVEAE+  ++DDFGDFAPTLEL++LIP 
Sbjct: 63  SRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPA 122

Query: 121 IDYSGGISTYPLLVLQVCLY 140
           +DYS GIS+Y LLVLQV  +
Sbjct: 123 VDYSQGISSYALLVLQVTYF 142


>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase
 pdb|2BGH|B Chain B, Crystal Structure Of Vinorine Synthase
          Length = 421

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 25  ANVDLVVPRFHTPSVYFYRPTGAANFFDAGV---LKDALSKALVPFYPMAGRLKRDDDGR 81
           +++D ++   H P + FY     +N   A     LK +LSK L  FYP+AGR+  +    
Sbjct: 29  SHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRINVNS--- 85

Query: 82  IEIDCNAEGVLFVEAETTSLIDDFGDFAPTLE-LKQLIPTIDYSGG 126
             +DCN  GV FVEA   + +         LE L Q +P+  Y GG
Sbjct: 86  -SVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGG 130


>pdb|4EHT|A Chain A, Activator Of The 2-Hydroxyisocaproyl-Coa Dehydratase From
           Clostridium Difficile With Bound Adp
 pdb|4EHT|B Chain B, Activator Of The 2-Hydroxyisocaproyl-Coa Dehydratase From
           Clostridium Difficile With Bound Adp
 pdb|4EHU|A Chain A, Activator Of The 2-Hydroxyisocaproyl-Coa Dehydratase From
           Clostridium Difficile With Bound Adpnp
 pdb|4EHU|B Chain B, Activator Of The 2-Hydroxyisocaproyl-Coa Dehydratase From
           Clostridium Difficile With Bound Adpnp
 pdb|4EIA|A Chain A, Activator Of The 2-Hydroxyisocaproyl-Coa Dehydratase From
           Clostridium Difficile Without Nucleotide
          Length = 276

 Score = 33.5 bits (75), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 50  FFDAGVLKDALSKALVPFYPMAGRLK-RDDDGRI-EIDCNAEGVLFVEAETTSLIDDFGD 107
           +   G+ ++ + K +V  Y   GR+   D D +I E+ C+A GV F+  ET ++ID  G 
Sbjct: 47  YGKTGLAREDIKKVVVTGY---GRMNYSDADKQISELSCHARGVNFIIPETRTIIDIGGQ 103

Query: 108 FAPTLEL 114
            A  L+L
Sbjct: 104 DAKVLKL 110


>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase
           (Ntmat1) Complexed With Malonyl-Coa
          Length = 453

 Score = 28.5 bits (62), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 20/100 (20%)

Query: 55  VLKDALSKALVPFYPMAGRLK--RDDDGRIE---IDCNAEGVLFVEAET--TSLI----- 102
            LKD+LS  L  + P+AG +   +D  G  E   +  N+  V+F E++     LI     
Sbjct: 59  TLKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVTGNSVSVIFSESDXDFNYLIGYHPR 118

Query: 103 --DDFGDFAPTLELKQLIPTIDYSGGISTYPLLVLQVCLY 140
              DF  F P L   +  P      G+   P+L +QV L+
Sbjct: 119 NTKDFYHFVPQLAEPKDAP------GVQLAPVLAIQVTLF 152


>pdb|1T70|A Chain A, Crystal Structure Of A Novel Phosphatase From Deinococcus
           Radiodurans
 pdb|1T70|B Chain B, Crystal Structure Of A Novel Phosphatase From Deinococcus
           Radiodurans
 pdb|1T70|C Chain C, Crystal Structure Of A Novel Phosphatase From Deinococcus
           Radiodurans
 pdb|1T70|D Chain D, Crystal Structure Of A Novel Phosphatase From Deinococcus
           Radiodurans
 pdb|1T70|E Chain E, Crystal Structure Of A Novel Phosphatase From Deinococcus
           Radiodurans
 pdb|1T70|F Chain F, Crystal Structure Of A Novel Phosphatase From Deinococcus
           Radiodurans
 pdb|1T70|G Chain G, Crystal Structure Of A Novel Phosphatase From Deinococcus
           Radiodurans
 pdb|1T70|H Chain H, Crystal Structure Of A Novel Phosphatase From Deinococcus
           Radiodurans
          Length = 255

 Score = 26.6 bits (57), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 66  PFYPMAGRLKRDDDGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTLELKQLIPTID 122
           PF  M   L+RDD G + +D +AE     EA    L    G  A  +     +PT D
Sbjct: 127 PFRTMDALLERDDLGTVFVDFHAEATSEKEAMGWHLA---GRVAAVIGTHTHVPTAD 180


>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From
           Arthrobacter Globiformis
 pdb|2YX9|B Chain B, Crystal Structure Of D298k Copper Amine Oxidase From
           Arthrobacter Globiformis
          Length = 638

 Score = 25.8 bits (55), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 79  DGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTL 112
           DG IE +  A GV+F  A      D+    AP L
Sbjct: 393 DGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGL 426


>pdb|2EL7|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From
           Thermus Thermophilus
 pdb|2EL7|B Chain B, Crystal Structure Of Tryptophanyl-Trna Synthetase From
           Thermus Thermophilus
          Length = 337

 Score = 25.8 bits (55), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 42  YRPTGAANFFDAGVLKDALSKALVPFYPMAGRLKRDDD 79
           YR  G   +    +L D L +AL P    A  LK+D D
Sbjct: 260 YRKAGVGTYVVKRILFDHLMEALRPIRERAEALKKDPD 297


>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4-
           Methylphenoxy)-2-Butyn-1-Amine")
 pdb|1SII|A Chain A, Agao In Covalent Complex With The Inhibitor Noba
           ("4-(2-Naphthyloxy)- 2-Butyn-1-Amine")
 pdb|1RJO|A Chain A, Agao + Xe
 pdb|2BT3|A Chain A, Agao In Complex With Ruthenium-c4-wire At 1.73 Angstroms
 pdb|1W4N|A Chain A, Agao Covalent Complex With Tranylcypromine
 pdb|1W4N|B Chain B, Agao Covalent Complex With Tranylcypromine
 pdb|1W5Z|A Chain A, Agao Covalent Complex With Benzylhydrazine
 pdb|1W6C|A Chain A, Agao Holoenzyme In A Small Cell, At 2.2 Angstroms
 pdb|1W6G|A Chain A, Agao Holoenzyme At 1.55 Angstroms
 pdb|2CFD|A Chain A, Agao In Complex With Wc4l3 (Ru-Wire Inhibitor, 4-Carbon
           Linker, Lambda Enantiomer, Data Set 3)
 pdb|2CFD|B Chain B, Agao In Complex With Wc4l3 (Ru-Wire Inhibitor, 4-Carbon
           Linker, Lambda Enantiomer, Data Set 3)
 pdb|2CFG|A Chain A, Agao In Complex With Wc4d3 (Ru-Wire Inhibitor, 4-Carbon
           Linker, Delta Enantiomer, Data Set 3)
 pdb|2CFG|B Chain B, Agao In Complex With Wc4d3 (Ru-Wire Inhibitor, 4-Carbon
           Linker, Delta Enantiomer, Data Set 3)
 pdb|2CFK|A Chain A, Agao In Complex With Wc5 (Ru-Wire Inhibitor, 5-Carbon
           Linker)
 pdb|2CFL|A Chain A, Agao In Complex With Wc6b (Ru-Wire Inhibitor, 6-Carbon
           Linker, Data Set B)
 pdb|2CFW|A Chain A, Agao In Complex With Wc7a (Ru-Wire Inhibitor, 7-Carbon
           Linker, Data Set A)
 pdb|2CG0|A Chain A, Agao In Complex With Wc9a (Ru-Wire Inhibitor, 9-Carbon
           Linker, Data Set A)
 pdb|2CG1|A Chain A, Agao In Complex With Wc11b (Ru-Wire Inhibitor, 11-Carbon
           Linker, Data Set B)
 pdb|3KII|A Chain A, Agao 5-Phenoxy-2,3-Pentadienylamine Complex
 pdb|3KII|B Chain B, Agao 5-Phenoxy-2,3-Pentadienylamine Complex
 pdb|3KN4|A Chain A, Agao 6-Phenyl-2,3-Hexadienylamine Complex
          Length = 646

 Score = 25.8 bits (55), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 79  DGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTL 112
           DG IE +  A GV+F  A      D+    AP L
Sbjct: 391 DGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGL 424


>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From
           Arthrobacter Globiformis
 pdb|2CWT|B Chain B, Catalytic Base Deletion In Copper Amine Oxidase From
           Arthrobacter Globiformis
 pdb|2CWU|A Chain A, Substrate Schiff-Base Intermediate Of Copper Amine Oxidase
           From Arthrobacter Globiformis
 pdb|2CWU|B Chain B, Substrate Schiff-Base Intermediate Of Copper Amine Oxidase
           From Arthrobacter Globiformis
 pdb|2CWV|A Chain A, Product Schiff-Base Intermediate Of Copper Amine Oxidase
           From Arthrobacter Globiformis
 pdb|2CWV|B Chain B, Product Schiff-Base Intermediate Of Copper Amine Oxidase
           From Arthrobacter Globiformis
 pdb|2D1W|A Chain A, Substrate Schiff-Base Intermediate With Tyramine In Copper
           Amine Oxidase From Arthrobacter Globiformis
 pdb|2D1W|B Chain B, Substrate Schiff-Base Intermediate With Tyramine In Copper
           Amine Oxidase From Arthrobacter Globiformis
          Length = 638

 Score = 25.8 bits (55), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 79  DGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTL 112
           DG IE +  A GV+F  A      D+    AP L
Sbjct: 393 DGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGL 426


>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Initial Intermediate In
           Topaquinone Biogenesis
 pdb|1IVU|B Chain B, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Initial Intermediate In
           Topaquinone Biogenesis
 pdb|1WMP|A Chain A, Crystal Structure Of Amine Oxidase Complexed With Cobalt
           Ion
 pdb|1WMP|B Chain B, Crystal Structure Of Amine Oxidase Complexed With Cobalt
           Ion
 pdb|1AVK|A Chain A, Crystal Structures Of The Copper-Containing Amine Oxidase
           From Arthrobacter Globiformis In The Holo-And Apo-Forms:
           Implications For The Biogenesis Of Topa Quinone
          Length = 638

 Score = 25.8 bits (55), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 79  DGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTL 112
           DG IE +  A GV+F  A      D+    AP L
Sbjct: 393 DGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGL 426


>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of
           Copper Ion In Arthrobacter Globiformis Amine Oxidase
 pdb|1UI7|B Chain B, Site-Directed Mutagenesis Of His433 Involved In Binding Of
           Copper Ion In Arthrobacter Globiformis Amine Oxidase
          Length = 638

 Score = 25.8 bits (55), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 79  DGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTL 112
           DG IE +  A GV+F  A      D+    AP L
Sbjct: 393 DGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGL 426


>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase
           From Arthrobacter Globiformis Formed With
           4-Hydroxybenzylhydrazine
 pdb|2E2U|B Chain B, Substrate Schiff-Base Analogue Of Copper Amine Oxidase
           From Arthrobacter Globiformis Formed With
           4-Hydroxybenzylhydrazine
 pdb|2E2V|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase
           From Arthrobacter Globiformis Formed With
           Benzylhydrazine
 pdb|2E2V|B Chain B, Substrate Schiff-Base Analogue Of Copper Amine Oxidase
           From Arthrobacter Globiformis Formed With
           Benzylhydrazine
          Length = 628

 Score = 25.8 bits (55), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 79  DGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTL 112
           DG IE +  A GV+F  A      D+    AP L
Sbjct: 393 DGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGL 426


>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Early Intermediate In
           Topaquinone Biogenesis
 pdb|1IVV|B Chain B, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Early Intermediate In
           Topaquinone Biogenesis
 pdb|1IVW|A Chain A, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Late Intermediate In
           Topaquinone Biogenesis
 pdb|1IVW|B Chain B, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Late Intermediate In
           Topaquinone Biogenesis
 pdb|1IVX|A Chain A, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Holo Form Generated By
           Biogenesis In Crystal.
 pdb|1IVX|B Chain B, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Holo Form Generated By
           Biogenesis In Crystal.
 pdb|1IQX|A Chain A, Crystal Structure Of Cobalt-Substituted Amine Oxidase From
           Arthrobacter Globiformis
 pdb|1IQX|B Chain B, Crystal Structure Of Cobalt-Substituted Amine Oxidase From
           Arthrobacter Globiformis
 pdb|1IQY|A Chain A, Crystal Structure Of Nickel-Substituted Amine Oxidase From
           Arthrobacter Globiformis
 pdb|1IQY|B Chain B, Crystal Structure Of Nickel-Substituted Amine Oxidase From
           Arthrobacter Globiformis
 pdb|1IU7|A Chain A, Holo Form Of Copper-Containing Amine Oxidase From
           Arthrobacter Globiformis
 pdb|1IU7|B Chain B, Holo Form Of Copper-Containing Amine Oxidase From
           Arthrobacter Globiformis
 pdb|1WMN|A Chain A, Crystal Structure Of Topaquinone-Containing Amine Oxidase
           Activated By Cobalt Ion
 pdb|1WMN|B Chain B, Crystal Structure Of Topaquinone-Containing Amine Oxidase
           Activated By Cobalt Ion
 pdb|1WMO|A Chain A, Crystal Structure Of Topaquinone-containing Amine Oxidase
           Activated By Nickel Ion
 pdb|1WMO|B Chain B, Crystal Structure Of Topaquinone-containing Amine Oxidase
           Activated By Nickel Ion
 pdb|1AV4|A Chain A, Crystal Structures Of The Copper-Containing Amine Oxidase
           From Arthrobacter Globiformis In The Holo-And Apo-Forms:
           Implications For The Biogenesis Of Topa Quinone
 pdb|1AVL|A Chain A, Crystal Structures Of The Copper-Containing Amine Oxidase
           From Arthrobacter Globiformis In The Holo-And Apo-Forms:
           Implications For The Biogenesis Of Topa Quinone
 pdb|2E2T|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase
           From Arthrobacter Globiformis Formed With
           Phenylhydrazine
 pdb|2ZL8|A Chain A, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Substrate Schiff-Base
           Intermediate Formed With Ethylamine
 pdb|2ZL8|B Chain B, Crystal Structure Of Copper Amine Oxidase From
           Arthrobacter Globiformis: Substrate Schiff-Base
           Intermediate Formed With Ethylamine
 pdb|3AMO|A Chain A, Time-Resolved X-Ray Crystal Structure Analysis Of
           Enzymatic Reaction Of Copper Amine Oxidase From
           Arthrobacter Globiformis
 pdb|3AMO|B Chain B, Time-Resolved X-Ray Crystal Structure Analysis Of
           Enzymatic Reaction Of Copper Amine Oxidase From
           Arthrobacter Globiformis
          Length = 638

 Score = 25.8 bits (55), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 79  DGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTL 112
           DG IE +  A GV+F  A      D+    AP L
Sbjct: 393 DGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGL 426


>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of
           Copper Ion In Arthrobacter Globiformis Amine Oxidase
 pdb|1UI8|B Chain B, Site-directed Mutagenesis Of His592 Involved In Binding Of
           Copper Ion In Arthrobacter Globiformis Amine Oxidase
          Length = 638

 Score = 25.8 bits (55), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 79  DGRIEIDCNAEGVLFVEAETTSLIDDFGDFAPTL 112
           DG IE +  A GV+F  A      D+    AP L
Sbjct: 393 DGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGL 426


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.324    0.141    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,547,300
Number of Sequences: 62578
Number of extensions: 186004
Number of successful extensions: 407
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 392
Number of HSP's gapped (non-prelim): 18
length of query: 149
length of database: 14,973,337
effective HSP length: 90
effective length of query: 59
effective length of database: 9,341,317
effective search space: 551137703
effective search space used: 551137703
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.7 bits)