BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031999
(149 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 300 bits (767), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/149 (100%), Positives = 149/149 (100%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 296 bits (759), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/149 (98%), Positives = 149/149 (100%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT+DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 286 bits (732), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/148 (95%), Positives = 146/148 (98%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLTD+QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREADVDGDGQ+NYEEFV+VMMAK
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMMAK 148
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 285 bits (728), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 141/148 (95%), Positives = 146/148 (98%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLTD+QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFLNLMARKMKDTDSEE+LKEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREADVDGDGQ+NYEEFV+VMMAK
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMMAK 148
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 281 bits (718), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/145 (95%), Positives = 143/145 (98%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
LTD+QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
DFPEFLNLMARKMKDTDSEEELKEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDE
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 125 MIREADVDGDGQINYEEFVKVMMAK 149
MIREADVDGDGQ+NYEEFV+VMMAK
Sbjct: 121 MIREADVDGDGQVNYEEFVQVMMAK 145
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 278 bits (710), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/149 (89%), Positives = 145/149 (97%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 277 bits (708), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/149 (89%), Positives = 145/149 (97%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 63
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDE
Sbjct: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 123
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 124 EVDEMIREADIDGDGQVNYEEFVQMMTAK 152
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 277 bits (708), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/149 (89%), Positives = 145/149 (97%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDE
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 122 EVDEMIREADIDGDGQVNYEEFVQMMTAK 150
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 277 bits (708), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/149 (89%), Positives = 145/149 (97%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 277 bits (708), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/149 (89%), Positives = 145/149 (97%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
MA ++ D D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 60 GNGTIDFPEFLNLMARKM 77
G+G +++ EF+ +M K+
Sbjct: 133 GDGQVNYEEFVQMMTAKL 150
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 276 bits (707), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/149 (89%), Positives = 145/149 (97%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 276 bits (705), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 134/149 (89%), Positives = 144/149 (96%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTSK 149
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 276 bits (705), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 133/149 (89%), Positives = 145/149 (97%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVD+MIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 EVDQMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 275 bits (704), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/149 (89%), Positives = 143/149 (95%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV +M K
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTTK 149
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 275 bits (702), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 133/149 (89%), Positives = 144/149 (96%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIRE+D+DGDGQ+NYEEFV +M +K
Sbjct: 121 EVDEMIRESDIDGDGQVNYEEFVTMMTSK 149
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 275 bits (702), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 133/148 (89%), Positives = 144/148 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEE
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 126
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 127 VDEMIREADIDGDGQVNYEEFVQMMTAK 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 275 bits (702), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 133/148 (89%), Positives = 144/148 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 274 bits (701), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/148 (90%), Positives = 143/148 (96%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDGQ+NYEEFV +M AK
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTAK 148
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 274 bits (701), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/147 (89%), Positives = 143/147 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQMMTAK 450
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 274 bits (700), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/147 (89%), Positives = 143/147 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 274 bits (700), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/147 (89%), Positives = 143/147 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 273 bits (699), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/148 (89%), Positives = 143/148 (96%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTSK 148
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 273 bits (698), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/147 (89%), Positives = 143/147 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 273 bits (698), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/147 (89%), Positives = 143/147 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 273 bits (698), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 132/148 (89%), Positives = 144/148 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREA++DGDGQ+NYEEFV++M AK
Sbjct: 121 VDEMIREANIDGDGQVNYEEFVQMMTAK 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 273 bits (697), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 132/147 (89%), Positives = 143/147 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VDEMIREAD+DGDGQ+NYEEFV++M A
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 MMARK 75
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 273 bits (697), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/148 (89%), Positives = 144/148 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 272 bits (696), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/148 (89%), Positives = 143/148 (96%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGE LTDEE
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 121
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 272 bits (696), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/148 (89%), Positives = 143/148 (96%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGE LTDEE
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 271 bits (694), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 131/147 (89%), Positives = 142/147 (96%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MAR MKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 271 bits (694), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 131/146 (89%), Positives = 142/146 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 385
Query: 123 DEMIREADVDGDGQINYEEFVKVMMA 148
DEMIREAD+DGDGQ+NYEEFV++M A
Sbjct: 386 DEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 14/120 (11%)
Query: 41 GQNPTEAELQ----DMINEVDADGNGTIDFPEFLNLMARKM----KDTDSEE---ELKEA 89
G T AE++ ++N ++ G IDF E N++ K+ +D +EE E KEA
Sbjct: 223 GNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEA 279
Query: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
F +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 280 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 339
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 271 bits (694), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 131/147 (89%), Positives = 143/147 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+G
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 414 DEMIREADIDGDGQVNYEEFVQMMTAK 440
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 271 bits (693), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 131/147 (89%), Positives = 143/147 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 271 bits (693), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/146 (89%), Positives = 142/146 (97%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
QLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
IDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 124 EMIREADVDGDGQINYEEFVKVMMAK 149
EMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMMTAK 146
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 271 bits (693), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/147 (89%), Positives = 142/147 (96%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMK TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 270 bits (690), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/149 (87%), Positives = 143/149 (95%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+ DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
+GTIDFPEFL +MARKMK TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDE
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 270 bits (690), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/149 (87%), Positives = 143/149 (95%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+ DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
+GTIDFPEFL +MARKMK TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDE
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 269 bits (688), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/144 (90%), Positives = 141/144 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Query: 123 DEMIREADVDGDGQINYEEFVKVM 146
DEMIREAD+DGDGQ+NYEEFV++M
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQMM 144
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 145 VMMAK 149
+M K
Sbjct: 70 MMARK 74
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 269 bits (687), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 130/147 (88%), Positives = 142/147 (96%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFPEFL +MARKMK TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEV
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 268 bits (684), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/143 (90%), Positives = 140/143 (97%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
QLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
IDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 124 EMIREADVDGDGQINYEEFVKVM 146
EMIREAD+DGDGQ+NYEEFV++M
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 145 VMMAK 149
+M K
Sbjct: 69 MMARK 73
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 267 bits (683), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/144 (89%), Positives = 140/144 (97%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125
FPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEM
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 126 IREADVDGDGQINYEEFVKVMMAK 149
IREAD+DGDGQ+NYEEFV++M AK
Sbjct: 123 IREADIDGDGQVNYEEFVQMMTAK 146
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 267 bits (683), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/144 (89%), Positives = 140/144 (97%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125
FPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEM
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 126 IREADVDGDGQINYEEFVKVMMAK 149
IREAD+DGDGQ+NYEEFV++M AK
Sbjct: 121 IREADIDGDGQVNYEEFVQMMTAK 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 267 bits (682), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/144 (89%), Positives = 140/144 (97%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
DFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDE
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 125 MIREADVDGDGQINYEEFVKVMMA 148
MIREAD+DGDGQ+NYEEFV++M A
Sbjct: 121 MIREADIDGDGQVNYEEFVQMMTA 144
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 145 VMMAK 149
+M K
Sbjct: 68 MMARK 72
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 265 bits (677), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/148 (88%), Positives = 141/148 (95%), Gaps = 2/148 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL +MARKMK DSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEE
Sbjct: 61 GTIDFPEFLTMMARKMK--DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 118
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVTMMTSK 146
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 263 bits (672), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/147 (85%), Positives = 140/147 (95%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTK+LGTVMRSLGQNPTEAELQDMINEV ADGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
TIDFP+FL +MARKMKDTDSEEE++EAFRVF KD NG+ISAA+LRHVMTNLGEKLTDEEV
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEV 422
Query: 123 DEMIREADVDGDGQINYEEFVKVMMAK 149
DEMIREA +DGDGQ+NYE+FV++M AK
Sbjct: 423 DEMIREAGIDGDGQVNYEQFVQMMTAK 449
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 262 bits (669), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 127/148 (85%), Positives = 142/148 (95%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
A+QLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL+LMARKMK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+E
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDG INYEEFV++M++K
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMMVSK 148
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 260 bits (665), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 121/148 (81%), Positives = 142/148 (95%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++Q++EFKEAFSLFDKDGDGCITT+ELGTVMRSLGQNPTEAEL+DM++E+D DGN
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GT+DFPEFL +MARKMKDTD+EEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEE
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIR AD DGDGQ+NYEEFV+V+++K
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRVLVSK 148
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 259 bits (663), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/148 (85%), Positives = 141/148 (95%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
A +LT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL+LMARKMK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+E
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDEMIREAD+DGDG INYEEFV++M++K
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMMVSK 148
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 257 bits (657), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/143 (88%), Positives = 138/143 (96%), Gaps = 1/143 (0%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
T++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125
FPEFL +MARKMKDTDS EE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEM
Sbjct: 61 FPEFLTMMARKMKDTDS-EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 126 IREADVDGDGQINYEEFVKVMMA 148
IREA++DGDGQ+NYEEFV++M A
Sbjct: 120 IREANIDGDGQVNYEEFVQMMTA 142
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MA ++ D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E + DG
Sbjct: 68 MARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDG 127
Query: 61 NGTIDFPEFLNLMA 74
+G +++ EF+ +M
Sbjct: 128 DGQVNYEEFVQMMT 141
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 145 VMMAK 149
+M K
Sbjct: 67 MMARK 71
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 256 bits (654), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/148 (85%), Positives = 135/148 (91%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTV RSLGQNPTEAELQD INEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL ARK KDTDSEEE++EAFRVFDKD NG+ISAAELRHV TNLGEKLTDEE
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDE IREAD+DGDGQ+NYEEFV+ AK
Sbjct: 121 VDEXIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 255 bits (651), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/148 (84%), Positives = 135/148 (91%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTV RSLGQNPTEAELQD INEVDADGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTIDFPEFL ARK KDTDSEEE++EAFRVFDKD NG+ISAAELRHV TNLGEKLTDEE
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 121
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VD+ IREAD+DGDGQ+NYEEFV+ AK
Sbjct: 122 VDQXIREADIDGDGQVNYEEFVQXXTAK 149
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 248 bits (633), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/148 (83%), Positives = 133/148 (89%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTV RSLG NPTEAELQD INEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTI+FPEFL AR KDTDSEEE++EAFRVFDKD NG+ISAAELRHV TNLGEKLTDEE
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
VDE IREAD+DGDGQ+NYEEFV+ AK
Sbjct: 121 VDEXIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 241 bits (616), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 116/147 (78%), Positives = 137/147 (93%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
AD L+++QI +FKEAF LFDKDGDGCIT +EL TV+RSL QNPTE ELQDMI+EVDADGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTI+F EFL+LMA+K+KDTD+EEELKEAF+VFDKDQNG+ISA+ELRHVM NLGEKLTDEE
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
V++MI+EAD+DGDGQ+NYEEFVK+MM
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMMMT 147
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 82 SEEEL---KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
SEE++ KEAF +FDKD +G I+ EL V+ +L + T+EE+ +MI E D DG+G I
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 139 YEEFVKVMMAK 149
++EF+ +M K
Sbjct: 65 FDEFLSLMAKK 75
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 199 bits (506), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 124/146 (84%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+LT++QI+EFK+AF FDK+G G I T+ELGT+MR+LGQNPTEAELQD+I E + + NG
Sbjct: 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQ 62
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
++F EF +MA++M++TD+EEE++EAF++FD+D +GFIS AELR VM NLGEK+TDEE+D
Sbjct: 63 LNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEID 122
Query: 124 EMIREADVDGDGQINYEEFVKVMMAK 149
EMIREAD DGDG INYEEFV ++ K
Sbjct: 123 EMIREADFDGDGMINYEEFVWMISQK 148
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 186 bits (473), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 118/146 (80%), Gaps = 1/146 (0%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
M+ LT++QI+EFKEAF+LFDKD G I+ EL TVMRSLG +P+EAE+ D++NE+D DG
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
N I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVM 146
EVDEM+RE DG G+IN ++F ++
Sbjct: 121 EVDEMLREVS-DGSGEINIKQFAALL 145
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 186 bits (471), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 86/145 (59%), Positives = 119/145 (82%), Gaps = 1/145 (0%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+ LT++QI+EFKEAF+LFDKD +G I++ EL TVMRSLG +P+EAE+ D++NE+D DGN
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD E
Sbjct: 62 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
VD+M+RE DG G+IN ++F ++
Sbjct: 122 VDDMLREVS-DGSGEINIQQFAALL 145
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 185 bits (469), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 86/145 (59%), Positives = 119/145 (82%), Gaps = 1/145 (0%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+ LT++QI+EFKEAF+LFDKD +G I++ EL TVMRSLG +P+EAE+ D++NE+D DGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD E
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
VD+M+RE DG G+IN ++F ++
Sbjct: 121 VDDMLREVS-DGSGEINIQQFAALL 144
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 170 bits (430), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/90 (91%), Positives = 88/90 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFR 91
GTIDFPEFL +MARKMKDTDSEEE++EAFR
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 MMARK 75
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 164 bits (414), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 103/122 (84%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+ LT++QI+EFKEAF+LFDKD +G I++ EL TVMRSLG +P+EAE+ D++NE+D DGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD E
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 122 VD 123
++
Sbjct: 121 LE 122
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD NG IS++EL VM +LG ++ EV++++ E DVDG+ QI + EF+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 145 VM 146
+M
Sbjct: 71 LM 72
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 160 bits (406), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/79 (98%), Positives = 79/79 (100%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLTD+QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDT 80
GTIDFPEFLNLMARKMKDT
Sbjct: 61 GTIDFPEFLNLMARKMKDT 79
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 LMARK 75
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 152 bits (385), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/80 (92%), Positives = 78/80 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDTD 81
GTIDFPEFL +MARKMKDTD
Sbjct: 61 GTIDFPEFLTMMARKMKDTD 80
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 MMARK 75
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 151 bits (382), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/79 (92%), Positives = 77/79 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDT 80
GTIDFPEFL +MARKMKDT
Sbjct: 61 GTIDFPEFLTMMARKMKDT 79
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 MMARK 75
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 150 bits (379), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 112/145 (77%), Gaps = 3/145 (2%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
DF EFL +M R+MK+ SEEEL++ FR+FDK+ +GFI EL ++ GE +T+E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
++++++++D + DG+I+++EF+K+M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 145 VMMAK 149
VMM +
Sbjct: 80 VMMVR 84
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 150 bits (378), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 111/145 (76%), Gaps = 3/145 (2%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
DF EFL +M R+MK+ SEEEL + FR+FDK+ +GFI EL ++ GE +T+E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
++++++++D + DG+I+++EF+K+M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 145 VMMAK 149
VMM +
Sbjct: 80 VMMVR 84
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 149 bits (377), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 107/145 (73%), Gaps = 3/145 (2%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL +I EVD DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 65 DFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
DF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL + GE +TDEE
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
++ ++++ D + DG+I+++EF+K+M
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL- 76
Query: 145 VMMAK 149
VMM +
Sbjct: 77 VMMVR 81
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 149 bits (377), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 110/145 (75%), Gaps = 3/145 (2%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
DF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++ GE +T+E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
++++++++D + DG+I+++EF+K+M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 145 VMMAK 149
VMM +
Sbjct: 80 VMMVR 84
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 149 bits (377), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 110/145 (75%), Gaps = 3/145 (2%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 65 DFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
DF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++ GE +T+E+
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
++++++++D + DG+I+++EF+K+M
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 76
Query: 145 VMMAK 149
VMM +
Sbjct: 77 VMMVR 81
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 149 bits (376), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 99/142 (69%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI ++D DG+GTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
DF EFL +M KM + DS EE+ +AFR+FD D+ G IS L+ V LGE +TDEE+ E
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 125 MIREADVDGDGQINYEEFVKVM 146
MI EAD DGDG++N EEF ++M
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIM 143
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
+ ++E++EAF +FD D +G I A EL+ M LG + EE+ +MI + D DG G I++E
Sbjct: 5 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFE 64
Query: 141 EFVKVMMAK 149
EF+++M AK
Sbjct: 65 EFLQMMTAK 73
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +AF LFD D G I+ K L V + LG+N T+ ELQ+MI+E D DG+G ++
Sbjct: 78 DSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEE 137
Query: 68 EFLNLMAR 75
EF +M +
Sbjct: 138 EFFRIMKK 145
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 149 bits (376), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 107/145 (73%), Gaps = 3/145 (2%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+ KELGTVMR LGQ PT+ EL +I EVD DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 65 DFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
DF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL + GE +TDEE
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
++ ++++ D + DG+I+++EF+K+M
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL- 76
Query: 145 VMMAK 149
VMM +
Sbjct: 77 VMMVR 81
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 149 bits (376), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 72/79 (91%), Positives = 77/79 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 62 GTIDFPEFLNLMARKMKDT 80
GTIDFPEFL +MARKMKDT
Sbjct: 61 GTIDFPEFLTMMARKMKDT 79
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DGDG I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 MMARK 75
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/77 (92%), Positives = 75/77 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMK 78
GTIDFPEFL +MARKMK
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 MMARK 75
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 109/145 (75%), Gaps = 3/145 (2%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLNLMARKMKD---TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
DF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++ GE + +E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
++++++++D + DG+I+++EF+K+M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 145 VMMAK 149
VMM +
Sbjct: 80 VMMVR 84
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 145 bits (367), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/76 (92%), Positives = 74/76 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARKM 77
GTIDFPEFL +MARKM
Sbjct: 61 GTIDFPEFLTMMARKM 76
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 MMARK 75
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 145 bits (367), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 111/149 (74%), Gaps = 4/149 (2%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
+GT+DF EFL +M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +
Sbjct: 69 SGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETI 128
Query: 118 TDEEVDEMIREADVDGDGQINYEEFVKVM 146
T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 144 bits (364), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 100/142 (70%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+E+D DG+GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
DF EFL +M KM + DS EE+ +AFR+FD D +G I+ +LR V LGE LT+EE+ E
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 125 MIREADVDGDGQINYEEFVKVM 146
MI EAD + D +I+ +EF+++M
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIM 163
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
+ ++E++EAF +FD D +G I A EL+ M LG + EE+ +MI E D DG G I++E
Sbjct: 25 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 84
Query: 141 EFVKVMMAK 149
EF+ +M AK
Sbjct: 85 EFLTMMTAK 93
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +AF LFD D G IT K+L V + LG+N TE ELQ+MI E D + + ID
Sbjct: 98 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 157
Query: 68 EFLNLMAR 75
EF+ +M +
Sbjct: 158 EFIRIMKK 165
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 144 bits (362), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/75 (92%), Positives = 73/75 (97%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 63 TIDFPEFLNLMARKM 77
TIDFPEFL +MARKM
Sbjct: 62 TIDFPEFLTMMARKM 76
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 MMARK 75
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 144 bits (362), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/75 (92%), Positives = 73/75 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIDFPEFLNLMARK 76
GTIDFPEFL +MARK
Sbjct: 61 GTIDFPEFLTMMARK 75
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 VMMAK 149
+M K
Sbjct: 71 MMARK 75
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 144 bits (362), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/75 (92%), Positives = 73/75 (97%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 62 GTIDFPEFLNLMARK 76
GTIDFPEFL +MARK
Sbjct: 62 GTIDFPEFLTMMARK 76
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 145 VMMAK 149
+M K
Sbjct: 72 MMARK 76
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 144 bits (362), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 110/149 (73%), Gaps = 4/149 (2%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETI 128
Query: 118 TDEEVDEMIREADVDGDGQINYEEFVKVM 146
T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 142 bits (359), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 110/149 (73%), Gaps = 4/149 (2%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
+GT+DF EFL +M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETI 128
Query: 118 TDEEVDEMIREADVDGDGQINYEEFVKVM 146
T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 142 bits (357), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 110/149 (73%), Gaps = 4/149 (2%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
+GT+DF EFL +M R MKD SEEEL + FR++DK+ +G+I EL+ ++ GE +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETI 128
Query: 118 TDEEVDEMIREADVDGDGQINYEEFVKVM 146
T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 142 bits (357), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 110/149 (73%), Gaps = 4/149 (2%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETI 128
Query: 118 TDEEVDEMIREADVDGDGQINYEEFVKVM 146
T+++++E++++ D + DG+I+Y+E+++ M
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEWLEFM 157
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 109/149 (73%), Gaps = 4/149 (2%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
+GT+DF EFL +M R MKD SEEEL + FR+ DK+ +G+I EL+ ++ GE +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETI 128
Query: 118 TDEEVDEMIREADVDGDGQINYEEFVKVM 146
T+++++E++++ D + DG+I+Y+EF++ M
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 109/149 (73%), Gaps = 4/149 (2%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +
Sbjct: 69 SGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETI 128
Query: 118 TDEEVDEMIREADVDGDGQINYEEFVKVM 146
T+++++E++++ D + DG+I+Y+E ++ M
Sbjct: 129 TEDDIEELMKDGDKNNDGRIDYDEXLEFM 157
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 139 bits (351), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 72/76 (94%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
DQLT++QI+EFKEAFSL+DKDGDG ITTKELGTVMRSLG NPTEAELQDMINEVDADGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 63 TIDFPEFLNLMARKMK 78
TIDFPEFL +MAR MK
Sbjct: 62 TIDFPEFLTMMARIMK 77
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF ++DKD +G I+ EL VM +LG T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFL- 69
Query: 145 VMMAK 149
MMA+
Sbjct: 70 TMMAR 74
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/69 (100%), Positives = 69/69 (100%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 141 EFVKVMMAK 149
EFVKVMMAK
Sbjct: 61 EFVKVMMAK 69
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 68 EFLNLMARK 76
EF+ +M K
Sbjct: 61 EFVKVMMAK 69
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 138 bits (347), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 100/141 (70%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
T++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+E+D +G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125
F +FL +M +KM + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+ EM
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 126 IREADVDGDGQINYEEFVKVM 146
I EAD DGDG+++ +EF+++M
Sbjct: 121 IDEADRDGDGEVSEQEFLRIM 141
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +AF LFD D G I+ K L V + LG+N T+ ELQ+MI+E D DG+G +
Sbjct: 76 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ 135
Query: 68 EFLNLMAR 75
EFL +M +
Sbjct: 136 EFLRIMKK 143
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
+ ++E++EAF +FD D G I EL+ M LG + EE+ +MI E D +G G++N+
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 141 EFVKVMMAK 149
+F+ VM K
Sbjct: 63 DFLTVMTQK 71
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 136 bits (342), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/74 (87%), Positives = 72/74 (97%)
Query: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135
KMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 136 QINYEEFVKVMMAK 149
Q+NYEEFV++M AK
Sbjct: 61 QVNYEEFVQMMTAK 74
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 68 EFLNLMARK 76
EF+ +M K
Sbjct: 66 EFVQMMTAK 74
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/73 (87%), Positives = 71/73 (97%)
Query: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136
MKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 137 INYEEFVKVMMAK 149
+NYEEFV++M AK
Sbjct: 61 VNYEEFVQMMTAK 73
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 68 EFLNLMARK 76
EF+ +M K
Sbjct: 65 EFVQMMTAK 73
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/68 (91%), Positives = 66/68 (97%)
Query: 47 AELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL 106
AELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAEL
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 107 RHVMTNLG 114
RHVMTNLG
Sbjct: 61 RHVMTNLG 68
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG 41
MA ++ D D E +EAF +FDKDG+G I+ EL VM +LG
Sbjct: 27 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARK 30
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 70/73 (95%)
Query: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136
MKDTDSEEE++EAFRV DKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 137 INYEEFVKVMMAK 149
+NYEEFV++M AK
Sbjct: 82 VNYEEFVQMMTAK 94
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +EAF + DKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 68 EFLNLMARK 76
EF+ +M K
Sbjct: 86 EFVQMMTAK 94
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/71 (87%), Positives = 69/71 (97%)
Query: 79 DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
DTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+N
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 139 YEEFVKVMMAK 149
YEEFV++M AK
Sbjct: 61 YEEFVQMMTAK 71
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 68 EFLNLMARK 76
EF+ +M K
Sbjct: 63 EFVQMMTAK 71
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 127 bits (319), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 69/71 (97%)
Query: 79 DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
DTDSEEE++EAFRVFDKD NG+ISAA+LRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+N
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 139 YEEFVKVMMAK 149
YE+FV++M AK
Sbjct: 62 YEDFVQMMTAK 72
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E +EAF +FDKDG+G I+ +L VM +LG+ T+ E+ +MI E D DG+G +++ +F+
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
Query: 72 LMARK 76
+M K
Sbjct: 68 MMTAK 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 127 bits (318), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/69 (86%), Positives = 67/69 (97%)
Query: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 140 EEFVKVMMA 148
EEFV++M A
Sbjct: 61 EEFVQMMTA 69
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 68 EFLNLM 73
EF+ +M
Sbjct: 62 EFVQMM 67
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 127 bits (318), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 87/141 (61%), Gaps = 1/141 (0%)
Query: 7 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
DDQ+SEFKEAF LFD + G IT + L TV++ G A +M NE DA GNG I F
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 67 PEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
PEFL++M R+MK T SE+ L++AFR FD + G+I A L+ + NLG++L E E +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 127 READVDGDGQINYEEFVKVMM 147
+ + GQI Y+ F+ M
Sbjct: 122 GITETE-KGQIRYDNFINTMF 141
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 125 bits (314), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/70 (82%), Positives = 68/70 (97%)
Query: 79 DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
DTD+EEELKEAF+VFDKDQNG+ISA+ELRHVM NLGEKLTDEEV++MI+EAD+DGDGQ+N
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 139 YEEFVKVMMA 148
YEEFVK+MM
Sbjct: 64 YEEFVKMMMT 73
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MI E D DG+G +++ EF+
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 72 LM 73
+M
Sbjct: 70 MM 71
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 125 bits (313), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 66/67 (98%)
Query: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
TDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 140 EEFVKVM 146
EEFV++M
Sbjct: 61 EEFVQMM 67
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 68 EFLNLM 73
EF+ +M
Sbjct: 62 EFVQMM 67
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 124 bits (311), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 71/79 (89%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
AD L+++QI +FKEAF LFDKDGDGCIT +EL TV+RSL QNPTE ELQDMI+EVDADGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 62 GTIDFPEFLNLMARKMKDT 80
GTI+F EFL+LMA+K+KDT
Sbjct: 61 GTIEFDEFLSLMAKKVKDT 79
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 82 SEEEL---KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
SEE++ KEAF +FDKD +G I+ EL V+ +L + T+EE+ +MI E D DG+G I
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 139 YEEFVKVMMAK 149
++EF+ +M K
Sbjct: 65 FDEFLSLMAKK 75
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 68/73 (93%)
Query: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136
MK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+EVDEMIREAD+DGDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 137 INYEEFVKVMMAK 149
INYEEFV++M++K
Sbjct: 61 INYEEFVRMMVSK 73
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E EAF +FD+DG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 68
Query: 72 LMARK 76
+M K
Sbjct: 69 MMVSK 73
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 122 bits (307), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 65/67 (97%)
Query: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142
EEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 143 VKVMMAK 149
V++M AK
Sbjct: 61 VQMMTAK 67
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ EF+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 72 LMARK 76
+M K
Sbjct: 63 MMTAK 67
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 97/148 (65%), Gaps = 5/148 (3%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD--GNG 62
+++Q +EFKEAF LFD+ GDG I + G VMR+LGQNPT AE+ ++ +D
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 63 TIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
T+ F +FL +M K KD E+ E RVFDK+ NG + AE+RHV+ LGEK+T+E
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 120
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
EV++++ + D +G INYEE V+++++
Sbjct: 121 EVEQLVAGHE-DSNGCINYEELVRMVLS 147
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 97/148 (65%), Gaps = 5/148 (3%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD--GNG 62
+++Q +EFKEAF LFD+ GDG I + G VMR+LGQNPT AE+ ++ +D
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 63 TIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
T+ F +FL +M K KD E+ E RVFDK+ NG + AE+RHV+ LGEK+T+E
Sbjct: 63 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 122
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
EV++++ + D +G INYEE V+++++
Sbjct: 123 EVEQLVAGHE-DSNGCINYEELVRMVLS 149
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 120 bits (302), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 66/68 (97%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
D+EEELKEAF+VFDKDQNG+ISA+ELRHVM NLGEKLTDEEV++MI+EAD+DGDGQ+NYE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 141 EFVKVMMA 148
EFVK+MM
Sbjct: 61 EFVKMMMT 68
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MI E D DG+G +++ EF+
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 72 LM 73
+M
Sbjct: 65 MM 66
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 94/149 (63%), Gaps = 5/149 (3%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD--GN 61
+ DQ+ EFKEAF LFD+ GDG I + G VMR+LGQNPT AE+ ++ +D +
Sbjct: 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKS 62
Query: 62 GTIDFPEFLNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 119
+DF FL ++ K + + E+ E FRVFDK+ NG + AELRHV+T LGEK+T+
Sbjct: 63 RRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTE 122
Query: 120 EEVDEMIREADVDGDGQINYEEFVKVMMA 148
EEV E + D +G INYE F+K +++
Sbjct: 123 EEV-ETVLAGHEDSNGCINYEAFLKHILS 150
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 119 bits (297), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 68/76 (89%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
AD L+++QI +FKEAF LFDKDGDGCIT +EL TV+RSL QNPTE ELQDMI+EVDADGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 62 GTIDFPEFLNLMARKM 77
GTI+F EFL+LMA+K+
Sbjct: 61 GTIEFDEFLSLMAKKV 76
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 79 DTDSEEEL---KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135
D SEE++ KEAF +FDKD +G I+ EL V+ +L + T+EE+ +MI E D DG+G
Sbjct: 2 DILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNG 61
Query: 136 QINYEEFVKVMMAK 149
I ++EF+ +M K
Sbjct: 62 TIEFDEFLSLMAKK 75
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 117 bits (293), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 90/138 (65%), Gaps = 4/138 (2%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
QI EFKEAF++ D++ DG I ++L ++ S+G+NPT+ L+ M++E G I+F
Sbjct: 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP----GPINFTM 60
Query: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
FL + K+ TD E+ ++ AF FD++ +GFI LR ++T +G++ TDEEVDEM RE
Sbjct: 61 FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 129 ADVDGDGQINYEEFVKVM 146
A +D G NY EF +++
Sbjct: 121 APIDKKGNFNYVEFTRIL 138
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
+E KEAF + D++++GFI +L ++ ++G+ TDE ++ M+ EA G IN+ F+
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA----PGPINFTMFL 62
Query: 144 KVMMAK 149
+ K
Sbjct: 63 TMFGEK 68
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
+ AF+ FD++ G I L ++ ++G T+ E+ +M E D G ++ EF ++
Sbjct: 79 RNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRIL 138
Query: 74 ARKMK 78
K
Sbjct: 139 KHGAK 143
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 115 bits (289), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 89/137 (64%), Gaps = 4/137 (2%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
+ +E F +FDKD DG ++ +ELG+ +RSLG+NPT AEL + +++A D F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAK---EFDLATFKT 62
Query: 72 LMARKMK-DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
+ + +K T+ +E+ +AFR DK+ NG I AELR ++ NLG+ LT EV+E+++E
Sbjct: 63 VYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVS 122
Query: 131 VDGDGQINYEEFVKVMM 147
V GDG INYE FV +++
Sbjct: 123 VSGDGAINYESFVDMLV 139
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 41/66 (62%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
+Q E +AF DK+G+G I EL ++ +LG T +E+++++ EV G+G I++
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 68 EFLNLM 73
F++++
Sbjct: 133 SFVDML 138
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
T S ++++E F++FDKD +G +S EL + +LG+ T+ E++ + GQ+N
Sbjct: 1 TASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNA 52
Query: 140 EEF 142
+EF
Sbjct: 53 KEF 55
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 113 bits (283), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 98/151 (64%), Gaps = 5/151 (3%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
M L ++I E +EAF FDKD DG I ++LG MR++G PTE EL ++ +++ +
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 61 NGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGE 115
G +DF +F+ LM K+ D +EL++AFR FD + +G IS +ELR M LG
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGH 120
Query: 116 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
++ +++E+IR+ D++GDG++++EEFV++M
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGTIDFPE 68
+ E ++AF FD +GDG I+T EL MR L G +++++I +VD +G+G +DF E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 69 FLNLMAR 75
F+ +M+R
Sbjct: 147 FVRMMSR 153
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 47/66 (71%)
Query: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EEL+EAFR FDKD++G+I+ +L + M +G T+ E+ E+ ++ +++ G +++++FV
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 144 KVMMAK 149
++M K
Sbjct: 71 ELMGPK 76
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 113 bits (283), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 97/147 (65%), Gaps = 5/147 (3%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L ++I E +EAF FDKD DG I ++LG MR++G PTE EL ++ +++ + G +
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 65 DFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTD 119
DF +F+ LM K+ D +EL++AFR FD + +G IS +ELR M LG ++
Sbjct: 79 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 138
Query: 120 EEVDEMIREADVDGDGQINYEEFVKVM 146
+++E+IR+ D++GDG++++EEFV++M
Sbjct: 139 RDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGTIDFPE 68
+ E ++AF FD +GDG I+T EL MR L G +++++I +VD +G+G +DF E
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 69 FLNLMAR 75
F+ +M+R
Sbjct: 161 FVRMMSR 167
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 63 TIDFPEFLNLMARKMKDTDSEE--ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
+ +P L ++RK + EE EL+EAFR FDKD++G+I+ +L + M +G T+
Sbjct: 4 CVKYP--LRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEM 61
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
E+ E+ ++ +++ G +++++FV++M K
Sbjct: 62 ELIELSQQINMNLGGHVDFDDFVELMGPK 90
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 113 bits (282), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 98/151 (64%), Gaps = 5/151 (3%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
M L ++I E +EAF FDKD DG I ++LG MR++G PTE EL ++ +++ +
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 61 NGTIDFPEFLNLMARKM----KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGE 115
G +DF +F+ LM K+ D +EL++AFR FD + +G IS +ELR M LG
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 116 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
++ +++E+IR+ D++GDG++++EEFV++M
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGTIDFPE 68
+ E ++AF FD +GDG I+T EL MR+L G +++++I +VD +G+G +DF E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 69 FLNLMAR 75
F+ +M+R
Sbjct: 147 FVRMMSR 153
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 47/66 (71%)
Query: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EEL+EAFR FDKD++G+I+ +L + M +G T+ E+ E+ ++ +++ G +++++FV
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 144 KVMMAK 149
++M K
Sbjct: 71 ELMGPK 76
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 112 bits (279), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 92/145 (63%), Gaps = 9/145 (6%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
TDD S +K+AFSLFD+ G G I +G ++R+ GQNPT AE I E+++ +D
Sbjct: 2 TDD--SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVD 55
Query: 66 FPEFLNLMARK--MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
+FL ++ R EE + F+VFDKD G I ELR+V+T+LGEKL++EE+D
Sbjct: 56 MEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMD 115
Query: 124 EMIREADVDGDGQINYEEFVKVMMA 148
E+++ V DG +NY +FV++++A
Sbjct: 116 ELLKGVPVK-DGMVNYHDFVQMILA 139
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 98/145 (67%), Gaps = 5/145 (3%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI-NEVDADGNGT-ID 65
D+I++FKEAF LFD+ GD IT ++G ++R+LGQNPT AE+ ++ N + N I
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKIT 60
Query: 66 FPEFLNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
F EFL ++ A KD + E+ E RVFDK+ NG + AELRHV+ LGEK+T+EEV+
Sbjct: 61 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVE 120
Query: 124 EMIREADVDGDGQINYEEFVKVMMA 148
E+++ + D +G INYE FVK +M+
Sbjct: 121 ELMKGQE-DSNGCINYEAFVKHIMS 144
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 88/145 (60%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+ +L ++Q E EAFSLFD + DG + EL M++LG + E+ D+I+E D++G
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEG 72
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
+ + +F +M K+ D +E+K AF++FD D G IS LR V LGE LTDE
Sbjct: 73 RHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDE 132
Query: 121 EVDEMIREADVDGDGQINYEEFVKV 145
E+ MI E D+DGDG+IN EF+ +
Sbjct: 133 ELRAMIEEFDLDGDGEINENEFIAI 157
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
+ ++E+ EAF +FD + +GF+ EL+ M LG +L E+ ++I E D +G + Y+
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79
Query: 141 EFVKVMMAK 149
+F VM K
Sbjct: 80 DFYIVMGEK 88
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 109 bits (273), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 95/142 (66%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+LT++Q E +EAF LFD DG G I KEL R+LG P + E++ I+E+D +G G
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGK 83
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
+F +FL + +K + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+
Sbjct: 84 XNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 143
Query: 124 EMIREADVDGDGQINYEEFVKV 145
E I EAD DGDG+++ +EF+++
Sbjct: 144 EXIDEADRDGDGEVSEQEFLRI 165
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
+ ++E++EAF +FD D G I EL+ LG + EE+ + I E D +G G+ N+
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFG 87
Query: 141 EFVKVMMAK 149
+F+ V K
Sbjct: 88 DFLTVXTQK 96
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD--GNGTIDFPEF 69
+FKEAF LFD+ GD IT ++G + R+LGQNPT AE+ ++ + I F EF
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 66
Query: 70 LNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
L ++ A KD + E+ E RVFDK+ NG + AELRHV+ LGEK+T+EEV+E+++
Sbjct: 67 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK 126
Query: 128 EADVDGDGQINYEEFVKVMMA 148
+ D +G INYE FVK +M+
Sbjct: 127 GQE-DSNGCINYEAFVKHIMS 146
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD--GDGQINY 139
+ ++ KEAF +FD+ + I+A+++ + LG+ T+ E+++++ + I +
Sbjct: 4 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 63
Query: 140 EEFVKVMMA 148
EEF+ ++ A
Sbjct: 64 EEFLPMLQA 72
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD--GNGTIDFPEF 69
+FKEAF LFD+ GD IT ++G + R+LGQNPT AE+ ++ + I F EF
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 68
Query: 70 LNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
L ++ A KD + E+ E RVFDK+ NG + AELRHV+ LGEK+T+EEV+E+++
Sbjct: 69 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK 128
Query: 128 EADVDGDGQINYEEFVKVMMA 148
+ D +G INYE FVK +M+
Sbjct: 129 GQE-DSNGCINYEAFVKHIMS 148
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD--GDGQINY 139
+ ++ KEAF +FD+ + I+A+++ + LG+ T+ E+++++ + I +
Sbjct: 6 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 65
Query: 140 EEFVKVMMA 148
EEF+ ++ A
Sbjct: 66 EEFLPMLQA 74
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 64/77 (83%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+ LT++QI+EFKEAF+LFDKD +G I++ EL TVMRSLG +P+EAE+ D++NE+D DGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 62 GTIDFPEFLNLMARKMK 78
I+F EFL LM+R++K
Sbjct: 61 HQIEFSEFLALMSRQLK 77
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E KEAF +FDKD NG IS++EL VM +LG ++ EV++++ E DVDG+ QI + EF+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 145 VM 146
+M
Sbjct: 71 LM 72
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLTD+Q +EFK AF +F +D DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF EFL +M R MKD
Sbjct: 69 SGTVDFDEFLVMMVRCMKD 87
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F +D ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 102 bits (255), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 84/145 (57%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+ +L ++Q E EAFSLFD + DG + EL ++LG + E+ D+I+E D++G
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEG 72
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
+ +F + K+ D +E+K AF++FD D G IS LR V LGE LTDE
Sbjct: 73 RHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDE 132
Query: 121 EVDEMIREADVDGDGQINYEEFVKV 145
E+ I E D+DGDG+IN EF+ +
Sbjct: 133 ELRAXIEEFDLDGDGEINENEFIAI 157
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 102 bits (254), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F +D DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF EFL +M R MKD
Sbjct: 69 SGTVDFDEFLVMMVRCMKD 87
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F +D ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 87/139 (62%), Gaps = 12/139 (8%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN----GTIDFPEF 69
K+ F+LFDK G G I LG +R++G NPT +QD+IN AD + ++ +
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIIN---ADSSLRDASSLTLDQI 63
Query: 70 LNLMARKMKDTDSEEELK-----EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
L+ K+ D+ + K +AF+VFDK+ G +S +LR+++T LGEKLTD EVDE
Sbjct: 64 TGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDE 123
Query: 125 MIREADVDGDGQINYEEFV 143
+++ +VD +G+I+Y++F+
Sbjct: 124 LLKGVEVDSNGEIDYKKFI 142
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%)
Query: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
D T + +F +AF +FDK+ G ++ +L ++ LG+ T+AE+ +++ V+ D NG
Sbjct: 75 DATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNG 134
Query: 63 TIDFPEFLNLMARK 76
ID+ +F+ + R+
Sbjct: 135 EIDYKKFIEDVLRQ 148
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 93/148 (62%), Gaps = 5/148 (3%)
Query: 4 QLTDDQISEFKEAFSLFD-KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
+L+ +Q+ + AF F+ +G G ++T ++G ++ LG T++ ++ +I+E D GNG
Sbjct: 6 KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNG 65
Query: 63 TIDFPEFLNLMAR----KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 118
IDF F + AR ++ ++EL+EAFR++DK+ NG+IS +R ++ L E L+
Sbjct: 66 DIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLS 125
Query: 119 DEEVDEMIREADVDGDGQINYEEFVKVM 146
E++D MI E D DG G +++EEF+ VM
Sbjct: 126 SEDLDAMIDEIDADGSGTVDFEEFMGVM 153
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F + DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF EFL +M R MKD
Sbjct: 69 SGTVDFDEFLVMMVRCMKD 87
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F + ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 99.4 bits (246), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 60/75 (80%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 65 DFPEFLNLMARKMKD 79
DF EFL +M R+MK+
Sbjct: 74 DFEEFLVMMVRQMKE 88
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T E+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFL- 79
Query: 145 VMMAK 149
VMM +
Sbjct: 80 VMMVR 84
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 99.4 bits (246), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 60/75 (80%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLNLMARKMKD 79
DF EFL +M R+MK+
Sbjct: 74 DFEEFLVMMVRQMKE 88
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 145 VMMAK 149
VMM +
Sbjct: 80 VMMVR 84
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 99.0 bits (245), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF E+L +MAR MKD
Sbjct: 69 SGTVDFDEWLVMMARCMKD 87
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++E++
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 144 KVMMAK 149
VMMA+
Sbjct: 79 -VMMAR 83
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF EFL +M R MKD
Sbjct: 69 SGTVDFDEFLVMMVRCMKD 87
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+TKELGTVMR LGQNPT+ EL +I EVD DG+GTI
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 65 DFPEFLNLMARKMK 78
DF EFL +M R+MK
Sbjct: 63 DFEEFLVMMVRQMK 76
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS EL VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 68
Query: 145 VMMAK 149
VMM +
Sbjct: 69 VMMVR 73
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 91/153 (59%), Gaps = 12/153 (7%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+L+ D+I + K+ F LFD DG DG + +LG V R LG NP ++ + G
Sbjct: 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGE 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
++ F EFL M D E+ + EAF+ FD++ GFIS AELRHV++ LGE+L
Sbjct: 61 KSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERL 117
Query: 118 TDEEVDEMIREADV--DGDGQINYEEFVKVMMA 148
+DEEVDE+I D+ D +G + YEEFVK +MA
Sbjct: 118 SDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMA 150
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 6/150 (4%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+L+ D+I + KE F LFD DG DG + ++G V R LG NP ++ + G
Sbjct: 2 KLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVF-AVGGTHKMGE 60
Query: 62 GTIDFPEFLNLMARKMK-DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
++ F EFL M + + + EAF+ FD++ GFIS AELRHV++ LGE+L+DE
Sbjct: 61 KSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
Query: 121 EVDEMIREADV--DGDGQINYEEFVKVMMA 148
EVDE+I D+ D +G + YEEFVK +M
Sbjct: 121 EVDEIINLTDLQEDLEGNVKYEEFVKKVMT 150
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 6/150 (4%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+L+ D+I + KE F LFD DG DG + ++G V R LG NP ++ + G
Sbjct: 3 KLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVF-AVGGTHKMGE 61
Query: 62 GTIDFPEFLNLMARKMK-DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
++ F EFL M + + + EAF+ FD++ GFIS AELRHV++ LGE+L+DE
Sbjct: 62 KSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 121
Query: 121 EVDEMIREADV--DGDGQINYEEFVKVMMA 148
EVDE+I D+ D +G + YEEFVK +M
Sbjct: 122 EVDEIINLTDLQEDLEGNVKYEEFVKKVMT 151
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DGCI+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF E+L +M R MKD
Sbjct: 69 SGTVDFDEWLVMMVRCMKD 87
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++E++
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 92/153 (60%), Gaps = 12/153 (7%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+L+ D+I + K+ F LFD DG DG + +LG V R LG NP ++ + G
Sbjct: 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGE 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
++ F EFL M D E+ + EAF+ FD++ GFIS AELRHV+T LGE+L
Sbjct: 61 KSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERL 117
Query: 118 TDEEVDEMIREADV--DGDGQINYEEFVKVMMA 148
+DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 118 SDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 59/75 (78%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++ I+EFK AF +FD DG G I+TK LGTVMR LGQNPT+ EL +I EVD DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 DFPEFLNLMARKMKD 79
DF EFL +M R+MK+
Sbjct: 74 DFEEFLVMMVRQMKE 88
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
E K AF +FD D G IS L VM LG+ T EE+D +I E D DG G I++EEF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 145 VMMAK 149
VMM +
Sbjct: 80 VMMVR 84
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 92/153 (60%), Gaps = 12/153 (7%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+L+ D+I + K+ F LFD DG DG + +LG V R LG NP ++ + G
Sbjct: 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGE 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
++ F EFL M D E+ + EAF+ FD++ GFIS AELRHV+T LGE+L
Sbjct: 61 KSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERL 117
Query: 118 TDEEVDEMIREADV--DGDGQINYEEFVKVMMA 148
+DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 118 SDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 91/152 (59%), Gaps = 12/152 (7%)
Query: 5 LTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
L+ D+I + K+ F LFD DG DG + +LG V R LG NP ++ + G
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGEK 59
Query: 63 TIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT 118
++ F EFL M D E+ + EAF+ FD++ GFIS AELRHV+T LGE+L+
Sbjct: 60 SLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 116
Query: 119 DEEVDEMIREADV--DGDGQINYEEFVKVMMA 148
DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 117 DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 96.3 bits (238), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
A++L++++I KE F + D D G IT EL ++ +G E+E++D+++ D D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
GTID+ EF+ + + EE L AF FDKD +G+I+ E++ + G L D
Sbjct: 61 GTIDYGEFIAATVH-LNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIH 117
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+D+MI+E D D DGQI+Y EF +M +
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFAAMMRKR 145
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 95.5 bits (236), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF EFL +M R MKD
Sbjct: 69 SGTVDFDEFLVMMVRSMKD 87
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF EFL +M R MKD
Sbjct: 69 SGTVDFDEFLVMMVRSMKD 87
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DG I+TKELG VMR LGQNPT ELQ+MI+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF EFL +M R MKD
Sbjct: 69 SGTVDFDEFLVMMVRSMKD 87
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL VM LG+ T EE+ EMI E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KVMMAK 149
VMM +
Sbjct: 79 -VMMVR 83
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 12/151 (7%)
Query: 6 TDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+ D+I + K+ F LFD DG DG + +LG V R LG NP ++ + G +
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGEKS 59
Query: 64 IDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 119
+ F EFL M D E+ + EAF+ FD++ GFIS AELRHV+T LGE+L+D
Sbjct: 60 LPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 116
Query: 120 EEVDEMIREADV--DGDGQINYEEFVKVMMA 148
E+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 117 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 12/151 (7%)
Query: 6 TDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+ D+I + K+ F LFD DG DG + +LG V R LG NP ++ + G +
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGEKS 59
Query: 64 IDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 119
+ F EFL M D E+ + EAF+ FD++ GFIS AELRHV+T LGE+L+D
Sbjct: 60 LPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 116
Query: 120 EEVDEMIREADV--DGDGQINYEEFVKVMMA 148
E+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 117 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 12/153 (7%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+L+ D+I + K+ F LF DG DG + +LG V R LG NP ++ + G
Sbjct: 2 KLSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGE 60
Query: 62 GTIDFPEFLNLMARKMKDTDSEE----ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL 117
++ F EFL M D E+ + EAF+ FD++ GFIS AELRHV+T LGE+L
Sbjct: 61 KSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERL 117
Query: 118 TDEEVDEMIREADV--DGDGQINYEEFVKVMMA 148
+DE+VDE+I+ D+ D +G + YE+FVK +MA
Sbjct: 118 SDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 83/143 (58%), Gaps = 3/143 (2%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+A+ L++++I+ KE F+ D D G IT +EL ++ +G N E+E+ D+ D D
Sbjct: 17 IAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDN 76
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
+GTID+ EF+ + + E+ L AF FDKD +G+I+ EL+ G + D
Sbjct: 77 SGTIDYKEFIAATLH-LNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDV 133
Query: 121 EVDEMIREADVDGDGQINYEEFV 143
++E+ R+ D D DG+I+Y EFV
Sbjct: 134 RIEELXRDVDQDNDGRIDYNEFV 156
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
T Q+ EFKEAF L D+D DG I+ ++ SLG+ TE EL M+ A+ G I
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMV----AEAPGPI 106
Query: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
+F FL + ++ TD E+ + AF +FD + +G L+ +T GEK + +EVD+
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQ 165
Query: 125 MIREADVDGDGQINYEEFVKVM 146
+ EA +DG+G I+ ++F +++
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQIL 187
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 75
AF+LFD +GDG + L + + G+ ++ E+ ++E DGNG ID +F ++ +
Sbjct: 131 AFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK 189
Query: 76 KMKD 79
K+
Sbjct: 190 GAKE 193
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+L+ Q+ E KEAF++ D+D DG I ++L + SLG+ P + EL M+ E G
Sbjct: 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECP----GQ 64
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
++F FL L K+ TD E+ L+ AF +FD+D GFI L+ ++ N+G+ + EE+
Sbjct: 65 LNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIK 124
Query: 124 EMIREADVDGDGQINYEEFVKV 145
+ ++A + + Q NY + V +
Sbjct: 125 NVWKDAPLK-NKQFNYNKMVDI 145
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+QLT++Q +EFK AF +F DGCI+TKELG V R LGQNPT ELQ+ I+EVD DG
Sbjct: 9 VEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDG 68
Query: 61 NGTIDFPEFLNLMARKMKD 79
+GT+DF EFL R KD
Sbjct: 69 SGTVDFDEFLVXXVRCXKD 87
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 85 ELKEAFRVFD-KDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E K AF +F ++G IS EL V LG+ T EE+ E I E D DG G ++++EF+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFL 78
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 85.5 bits (210), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 4 QLTDDQISEFKEAFSLFD-KDG-DGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
QLT D+I E +E F LFD DG DG + ++G ++R LG NPTEA++ G
Sbjct: 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQH-GGTKKMGE 60
Query: 62 GTIDFPEFLNLMAR-KMKDTDSE-EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 119
E L + KDT + +E EAF+ FD++ G IS+AE+R+V+ LGE++T+
Sbjct: 61 KAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITE 120
Query: 120 EEVDEMIREADV--DGDGQINYEEFVKVMMA 148
++ +++ D+ D DG I YE+ +K +MA
Sbjct: 121 DQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDA-- 58
M+ + T EF EAF FD++G G I++ E+ V++ LG+ TE + D+ D
Sbjct: 75 MSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIRE 134
Query: 59 DGNGTIDFPEFL-NLMARKMKD 79
D +G I + + + +MA D
Sbjct: 135 DIDGNIKYEDLMKKVMAGPFPD 156
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 9/151 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
M D+I + F D D G ++ +E + + L QNP +Q +I+ D DG
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDG 65
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGE 115
NG +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+ NL +
Sbjct: 66 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 125
Query: 116 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
+ VD+ I AD DGDG+I++EEF V+
Sbjct: 126 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 9/151 (5%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
M D+I + F D D G ++ +E + + L QNP +Q +I+ D DG
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDG 66
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGE 115
NG +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+ NL +
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 126
Query: 116 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
+ VD+ I AD DGDG+I++EEF V+
Sbjct: 127 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 51/73 (69%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+E+D DG+GTI
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 65 DFPEFLNLMARKM 77
DF EFL +M KM
Sbjct: 84 DFEEFLTMMTAKM 96
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
+ ++E++EAF +FD D +G I A EL+ M LG + EE+ +MI E D DG G I++E
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 141 EFVKVMMAK 149
EF+ +M AK
Sbjct: 87 EFLTMMTAK 95
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 107
E+++ + D DG+GTID E L + R + +EE+K+ DKD +G I E
Sbjct: 31 EIREAFDLFDTDGSGTIDAKE-LKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
Query: 108 HVMT 111
+MT
Sbjct: 90 TMMT 93
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 9/144 (6%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D+I + F D D G ++ +E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFK 58
Query: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEV 122
EF+ +++ D E++L+ AFR++D D++G+IS EL V+ NL + + V
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 123 DEMIREADVDGDGQINYEEFVKVM 146
D+ I AD DGDG+I++EEF V+
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVV 142
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 9/144 (6%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D+I + F D D G ++ +E + + L QNP +Q +I+ D DGNG +DF
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFK 59
Query: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEV 122
EF+ +++ D E++L+ AFR++D D++G+IS EL V+ NL + + V
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 119
Query: 123 DEMIREADVDGDGQINYEEFVKVM 146
D+ I AD DGDG+I++EEF V+
Sbjct: 120 DKTIINADKDGDGRISFEEFCAVV 143
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
++F +FL +M +KM + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 124 EMIREADVDGDGQINYEEFVKVM 146
EMI EAD DGDG+++ +EF+++M
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIM 83
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +AF LFD D G I+ K L V + LG+N T+ ELQ+MI+E D DG+G +
Sbjct: 18 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ 77
Query: 68 EFLNLMAR 75
EFL +M +
Sbjct: 78 EFLRIMKK 85
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 83/143 (58%), Gaps = 5/143 (3%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+L QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ E G
Sbjct: 11 KLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GP 66
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
++F FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G+ +E+
Sbjct: 67 LNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 126
Query: 124 EMIREADVDGDGQINYEEFVKVM 146
+EA V+G G+ +Y +F ++
Sbjct: 127 MTFKEAPVEG-GKFDYVKFTAMI 148
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 92/152 (60%), Gaps = 10/152 (6%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
+A Q D + + K AF D++G G IT +L + RS P +L +++++D+D
Sbjct: 45 IAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL--LLDQIDSD 102
Query: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--L 117
G+G ID+ EFL A + S++ + AFRVFD D +G I+ AEL HV+ N ++ +
Sbjct: 103 GSGNIDYTEFL--AAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNI 160
Query: 118 TDEEVDE---MIREADVDGDGQINYEEFVKVM 146
T+ +V++ MIRE D +GDG+I++ EF ++M
Sbjct: 161 TERDVNQVKKMIREVDKNGDGKIDFYEFSEMM 192
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPL 56
Query: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
+F FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G+ +E+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 125 MIREADVDGDGQINYEEFVKVM 146
+EA V+G G+ +Y +F ++
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMI 137
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPL 56
Query: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
+F FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G+ +E+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 125 MIREADVDGDGQINYEEFVKVM 146
+EA V+G G+ +Y +F ++
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMI 137
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+L QI E KEAF++ D++ DG I +L + SLG+ P + EL M+ E G
Sbjct: 12 KLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP----GP 67
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
++F FL++ + K+ TDSEE ++ AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 68 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 127
Query: 124 EMIREADVDGDGQINYEEFVKVM 146
+EA V+G G+ +Y FV ++
Sbjct: 128 MTFKEAPVEG-GKFDYVRFVAMI 149
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 81/138 (58%), Gaps = 5/138 (3%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ E G ++F
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTM 57
Query: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G+ +E+ +E
Sbjct: 58 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 117
Query: 129 ADVDGDGQINYEEFVKVM 146
A V+G G+ +Y +F ++
Sbjct: 118 APVEG-GKFDYVKFTAMI 134
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 81/138 (58%), Gaps = 5/138 (3%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
QI E KEAFS+ D D DG ++ +++ + LG+ P + EL M+ E G ++F
Sbjct: 4 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTM 59
Query: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
FL++ + K+ TDSEE ++ AF +FD+ + ++ ++ ++ N+G+ +E+ +E
Sbjct: 60 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 119
Query: 129 ADVDGDGQINYEEFVKVM 146
A V+G G+ +Y +F ++
Sbjct: 120 APVEG-GKFDYVKFTAMI 136
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
+ +D++ E +EAF +FD+DG+G I+ +ELGT MRSLG P E EL+ +I +D DG+G +
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 65 DFPEFLNLMA 74
DF EF+ L+
Sbjct: 90 DFEEFVTLLG 99
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
D EE++EAF+VFD+D NGFIS EL M +LG + E++ +I+ D+DGDGQ+++E
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 141 EFVKVM 146
EFV ++
Sbjct: 93 EFVTLL 98
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 90/152 (59%), Gaps = 10/152 (6%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
+A Q D + + K F + D+DG G IT ++L + G + P +L +++++D+D
Sbjct: 42 IAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSD 99
Query: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--L 117
G+G ID+ EF+ A + S++ + AFRVFD D +G I+ AEL H++ N +K +
Sbjct: 100 GSGKIDYTEFI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNI 157
Query: 118 TDEEVD---EMIREADVDGDGQINYEEFVKVM 146
T +V+ MIR+ D + DG+I++ EF ++M
Sbjct: 158 TQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM 189
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E+L+ AFR FD+D +G I+ ELR M LG+ L EE+D MIREADVD DG++NYEEF
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 144 KVM 146
+++
Sbjct: 66 RML 68
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
+ + + AF FD+DGDG IT EL M LGQ + EL MI E D D +G +++ EF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 70 LNLMARK 76
++A++
Sbjct: 65 ARMLAQE 71
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
+ E KEAF++ D++ DG I +L SLG+ P + EL M+ E G ++F F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAP----GPLNFTMF 56
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
L++ + K+ TDSEE ++ AF +FD+D ++ ++ ++ N+G+ +E+ +EA
Sbjct: 57 LSIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 116
Query: 130 DVDGDGQINYEEFVKVM 146
V+G G+ +Y FV ++
Sbjct: 117 PVEG-GKFDYVRFVAMI 132
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+LT++Q E +EAF LFD DG G I KEL MR+LG P + E++ MI+E+D +G G
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGK 83
Query: 64 IDFPEFLNLMARKM 77
++F +FL +M +KM
Sbjct: 84 MNFGDFLTVMTQKM 97
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
+ ++E++EAF +FD D G I EL+ M LG + EE+ +MI E D +G G++N+
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 141 EFVKVMMAK 149
+F+ VM K
Sbjct: 88 DFLTVMTQK 96
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 107
E+++ + DADG GTID E L + R + +EE+K+ DK+ G ++ +
Sbjct: 32 EIREAFDLFDADGTGTIDVKE-LKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
Query: 108 HVMT 111
VMT
Sbjct: 91 TVMT 94
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+L + E KEAF++ D++ DG I +L + SLG+ P + EL M+ E G
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP----GP 71
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
++F FL++ + K+ TDSEE ++ AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 72 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 131
Query: 124 EMIREADVDGDGQINYEEFVKVM 146
+EA V+G G+ +Y FV ++
Sbjct: 132 MTFKEAPVEG-GKFDYVRFVAMI 153
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
+L + E KEAF++ D++ DG I +L + SLG+ P + EL M+ E G
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP----GP 71
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
++F FL++ + K+ TDSEE ++ AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 72 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 131
Query: 124 EMIREADVDGDGQINYEEFVKVM 146
+EA V+G G+ +Y FV ++
Sbjct: 132 MTFKEAPVEG-GKFDYVRFVAMI 153
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 54/73 (73%)
Query: 74 ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 133
+KM + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+ EMI EAD DG
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 134 DGQINYEEFVKVM 146
DG+++ +EF+++M
Sbjct: 61 DGEVSEQEFLRIM 73
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +AF LFD D G I+ K L V + LG+N T+ ELQ+MI+E D DG+G +
Sbjct: 8 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ 67
Query: 68 EFLNLMAR 75
EFL +M +
Sbjct: 68 EFLRIMKK 75
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
LT ++ E+KEAF LFDKD D +T +ELGTVMR+LG NPT+ ++ +++ + D D +G
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
Query: 65 DFPEFLNLMARKMKDTDS 82
D FL +M ++ DS
Sbjct: 68 DQETFLTIMLEYGQEVDS 85
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 75 RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD 134
+K+ + ++E KEAF++FDKD + ++A EL VM LG T +++ E++++ D D
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
Query: 135 GQINYEEFVKVMM 147
G+ + E F+ +M+
Sbjct: 65 GKFDQETFLTIML 77
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
+A L D +I+ + F D D G ++++E+ ++ +G ++ ++ ++D++
Sbjct: 47 IAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNA 106
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT--NLGEKLT 118
+G I + +FL K E L F+ FD D NG IS EL+ + ++ L
Sbjct: 107 SGQIHYTDFLAATIDKQTYLKKEVCLI-PFKFFDIDGNGKISVEELKRIFGRDDIENPLI 165
Query: 119 DEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
D+ +D +++E D++GDG+I++ EF+ +MM+K
Sbjct: 166 DKAIDSLLQEVDLNGDGEIDFHEFM-LMMSK 195
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFP 67
+I +FKEAF++ D++ DG I +L ++G+ N EL MI E +G I+F
Sbjct: 5 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFT 60
Query: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
FL + K+K D E+ + AF+V D D G I + L ++T G + T EE+ M
Sbjct: 61 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 120
Query: 128 EADVDGDGQINYEEFVKVM 146
D G ++Y+ V+
Sbjct: 121 AFPPDVAGNVDYKNICYVI 139
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFP 67
+I +FKEAF++ D++ DG I +L ++G+ N EL MI E +G I+F
Sbjct: 23 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFT 78
Query: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
FL + K+K D E+ + AF+V D D G I + L ++T G + T EE+ M
Sbjct: 79 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 138
Query: 128 EADVDGDGQINYEEFVKVM 146
D G ++Y+ V+
Sbjct: 139 AFPPDVAGNVDYKNICYVI 157
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136
M+D D E ELKEAFRV DK++ G I LR ++ +LG++LT++E++ MI E D DG G
Sbjct: 1 MEDLD-ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGT 59
Query: 137 INYEEFVKVMMA 148
++YEEF +MM+
Sbjct: 60 VDYEEFKCLMMS 71
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E KEAF + DK+ G I L +++SLG TE E+++MI E D DG+GT+D+ EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 72 LM 73
LM
Sbjct: 68 LM 69
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFP 67
QI +FKEAF++ D++ DG I +L ++G+ N EL MI E +G I+F
Sbjct: 10 QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFT 65
Query: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
FL + K+K D E+ + AF+V D D G I + L ++T ++ T EE+ M
Sbjct: 66 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWA 125
Query: 128 EADVDGDGQINYEEFVKVM 146
D G ++Y+ V+
Sbjct: 126 AFPPDVAGNVDYKNICYVI 144
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE-KLTDEEVDEMIREADVDGDG 135
M D ++ KEAF V D++++G I +LR +G + +EE+D MI+EA G
Sbjct: 5 MFDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SG 60
Query: 136 QINYEEFV 143
IN+ F+
Sbjct: 61 PINFTVFL 68
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 48/60 (80%)
Query: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E+ +AF+VFDK+ G +S +LR+++T LGEKLTD EVDE+++ +VD +G+I+Y++F+
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 42/65 (64%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
+F +AF +FDK+ G ++ +L ++ LG+ T+AE+ +++ V+ D NG ID+ +F+
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 65
Query: 72 LMARK 76
+ R+
Sbjct: 66 DVLRQ 70
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%)
Query: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142
++EL+EAFR++DK+ NG+IS +R ++ L E L+ E++D MI E D DG G +++EEF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 143 VKVM 146
+ VM
Sbjct: 62 MGVM 65
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E +EAF L+DK+G+G I+T + ++ L + + +L MI+E+DADG+GT+DF EF+
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 63
Query: 72 LMA 74
+M
Sbjct: 64 VMT 66
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 86/145 (59%), Gaps = 15/145 (10%)
Query: 12 EFKEAFSLFDKDGDGCITTKEL---GTVMRS----LGQ-NPTEAELQDMINEVDADGNGT 63
E + F DK+GDG + KEL V+R+ LG+ E E+ +++ EVD D NG
Sbjct: 356 ELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGY 415
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV--MTNLGEKLTDEE 121
I++ EF+++ K + SEE L+ AF +FD D++G I+ EL ++ +T++ EK
Sbjct: 416 IEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTW--- 471
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
++++ EAD + D I+++EFV +M
Sbjct: 472 -NDVLGEADQNKDNMIDFDEFVSMM 495
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL-------RHVMTNLGE-KLTDEEVD 123
+ K+ + +EL + F+ DK+ +G + EL R+ LGE K +EEVD
Sbjct: 343 FIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVD 402
Query: 124 EMIREADVDGDGQINYEEFVKVMMAK 149
+++E D D +G I Y EF+ V M K
Sbjct: 403 NILKEVDFDKNGYIEYSEFISVCMDK 428
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 17/160 (10%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL----GTVMRSLGQNPT-------EAE 48
M +LT D+ E F DK+GDG + EL +MR GQ+ + E E
Sbjct: 324 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 383
Query: 49 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
+ +++ VD D NG I++ EF+ + A K S E L+ AFR+FD D +G IS+ EL
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTEL-- 440
Query: 109 VMTNLGEKLTDEEV-DEMIREADVDGDGQINYEEFVKVMM 147
T G D E ++ E D + DG+++++EF ++++
Sbjct: 441 -ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLN 71
+ AF +FD D G I++ EL T+ G + ++E + +++EVD + +G +DF EF
Sbjct: 420 LERAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 476
Query: 72 LMAR 75
++ +
Sbjct: 477 MLLK 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 17/160 (10%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL----GTVMRSLGQNPT-------EAE 48
M +LT D+ E F DK+GDG + EL +MR GQ+ + E E
Sbjct: 347 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 406
Query: 49 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
+ +++ VD D NG I++ EF+ + A K S E L+ AFR+FD D +G IS+ EL
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTEL-- 463
Query: 109 VMTNLGEKLTDEEV-DEMIREADVDGDGQINYEEFVKVMM 147
T G D E ++ E D + DG+++++EF ++++
Sbjct: 464 -ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLN 71
+ AF +FD D G I++ EL T+ G + ++E + +++EVD + +G +DF EF
Sbjct: 443 LERAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 499
Query: 72 LMAR 75
++ +
Sbjct: 500 MLLK 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 17/160 (10%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL----GTVMRSLGQNPT-------EAE 48
M +LT D+ E F DK+GDG + EL +MR GQ+ + E E
Sbjct: 348 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 407
Query: 49 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
+ +++ VD D NG I++ EF+ + A K S E L+ AFR+FD D +G IS+ EL
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTEL-- 464
Query: 109 VMTNLGEKLTDEEV-DEMIREADVDGDGQINYEEFVKVMM 147
T G D E ++ E D + DG+++++EF ++++
Sbjct: 465 -ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLN 71
+ AF +FD D G I++ EL T+ G + ++E + +++EVD + +G +DF EF
Sbjct: 444 LERAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 500
Query: 72 LMAR 75
++ +
Sbjct: 501 MLLK 504
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 48/66 (72%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
DS EE+ +AFR+FD D +G I+ +LR V LGE LT+EE+ EMI EAD + D +I+ +
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 141 EFVKVM 146
EF+++M
Sbjct: 66 EFIRIM 71
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
D E +AF LFD D G IT K+L V + LG+N TE ELQ+MI E D + + ID
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 68 EFLNLMAR 75
EF+ +M +
Sbjct: 66 EFIRIMKK 73
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+++Q E KEAF LFD + G I EL MR+LG + + E+ +++NE D +GNG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 65 DFPEFLNLMARKMKDTD 81
F +FL++M K+K+ D
Sbjct: 61 GFDDFLDIMTEKIKNRD 77
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
+ ++E+KEAF +FD ++ G I EL+ M LG + E+ E++ E D +G+G I ++
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 141 EFVKVMMAK 149
+F+ +M K
Sbjct: 64 DFLDIMTEK 72
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 16/154 (10%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKEL----GTVMRSLGQNPT-------EAELQDMIN 54
+ D+ E F DK+GDG + EL + R GQ+ + E E+ +++
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLD 389
Query: 55 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
VD D NG I++ EF+ + A K S E L+ AFR FD D +G IS+ EL T G
Sbjct: 390 AVDFDKNGYIEYSEFVTV-AXDRKTLLSRERLERAFRXFDSDNSGKISSTEL---ATIFG 445
Query: 115 EKLTDEEV-DEMIREADVDGDGQINYEEFVKVMM 147
D E ++ E D + DG+++++EF + ++
Sbjct: 446 VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLL 479
Score = 33.5 bits (75), Expect = 0.042, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAEL-----------RHVMTNLGEKLTDEEVDE 124
K+ D +EL F DK+ +G + AEL + L + EVD+
Sbjct: 327 KLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQ 386
Query: 125 MIREADVDGDGQINYEEFVKV 145
++ D D +G I Y EFV V
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTV 407
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L ++I E +EAF FDKD DG I ++LG MR++G PTE EL ++ +++ + G +
Sbjct: 4 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 63
Query: 65 DFPEFLNLMARKM 77
DF +F+ LM K+
Sbjct: 64 DFDDFVELMGPKL 76
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 47/66 (71%)
Query: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EEL+EAFR FDKD++G+I+ +L + M +G T+ E+ E+ ++ +++ G +++++FV
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 144 KVMMAK 149
++M K
Sbjct: 70 ELMGPK 75
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL--------GTVMRSLGQNPTEAELQD 51
MA +LT ++ E + F DK+GDG + +EL G + E+E+
Sbjct: 52 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 111
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
++ D D NG ID+ EF+ + A K S+++L+ AF+ FD+D NG IS EL V
Sbjct: 112 ILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG 170
Query: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
+ L + EMI D + DG +++EEF K++
Sbjct: 171 L--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 203
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLT-------DEE 121
L MA K+ + +EL + FR DK+ +G + EL + L GE++ + E
Sbjct: 49 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 108
Query: 122 VDEMIREADVDGDGQINYEEFVKVMM 147
VD ++ AD D +G I+Y EFV V M
Sbjct: 109 VDAILGAADFDRNGYIDYSEFVTVAM 134
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFL 70
+ + AF FD+DG+G I+ EL +V G + E++ ++MI+ +D++ +G +DF EF
Sbjct: 144 KLESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGDVDFEEFC 200
Query: 71 NLMAR 75
++ +
Sbjct: 201 KMIQK 205
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 88 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E R F Q ++ A L ++ + L + +E+ ++ R D +GDGQ++ +E +
Sbjct: 33 ENMRKFQNSQK--LAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELI 86
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL--------GTVMRSLGQNPTEAELQD 51
MA +LT ++ E + F DK+GDG + +EL G + E+E+
Sbjct: 335 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 394
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
++ D D NG ID+ EF+ + A K S+++L+ AF+ FD+D NG IS EL V
Sbjct: 395 ILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG 453
Query: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
+ L + EMI D + DG +++EEF K++
Sbjct: 454 L--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 486
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLT-------DEE 121
L MA K+ + +EL + FR DK+ +G + EL + L GE++ + E
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 122 VDEMIREADVDGDGQINYEEFVKVMM 147
VD ++ AD D +G I+Y EFV V M
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAM 417
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 88 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E R F Q ++ A L ++ + L + +E+ ++ R D +GDGQ++ +E +
Sbjct: 316 ENMRKFQNSQK--LAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELI 369
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL-----------GTVMRSLGQNPTEAE 48
M +LT ++ E + F D +GDG + KEL G + L + EAE
Sbjct: 29 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 88
Query: 49 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
+ ++ VD D NG I++ EF+ + K + S E L AF+ FD D +G I+ EL
Sbjct: 89 VDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGR 147
Query: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
+ ++ DE ++++E D + DG++++EEFV++M
Sbjct: 148 LFGV--TEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL----RHVMTNLGEKLTD-------E 120
M K+ + +EL + FR D + +G + EL R +M G+ ++D
Sbjct: 28 FMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEA 87
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVD +++ D D +G I Y EFV V M K
Sbjct: 88 EVDHILQSVDFDRNGYIEYSEFVTVCMDK 116
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNLMA 74
AF FD DG G IT +ELG R G + E ++ E D + +G +DF EF+ +M
Sbjct: 128 AFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
Query: 75 R 75
+
Sbjct: 185 K 185
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL-----------GTVMRSLGQNPTEAE 48
M +LT ++ E + F D +GDG + KEL G + L + EAE
Sbjct: 303 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 362
Query: 49 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
+ ++ VD D NG I++ EF+ + K + S E L AF+ FD D +G I+ EL
Sbjct: 363 VDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGR 421
Query: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
+ ++ DE ++++E D + DG++++EEFV++M
Sbjct: 422 LFGV--TEVDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL----RHVMTNLGEKLTD-------E 120
M K+ + +EL + FR D + +G + EL R +M G+ ++D
Sbjct: 302 FMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEA 361
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
EVD +++ D D +G I Y EFV V M K
Sbjct: 362 EVDHILQSVDFDRNGYIEYSEFVTVCMDK 390
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNLMA 74
AF FD DG G IT +ELG R G + E ++ E D + +G +DF EF+ +M
Sbjct: 402 AFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
Query: 75 R 75
+
Sbjct: 459 K 459
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
A ++ +Q++EF+ +F+ FD+ G + ++ + S+G N EAE +++ VD +
Sbjct: 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRM 775
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 107
G + F F++ M+R+ DTD+ +++ +F++ D+N +I+ ELR
Sbjct: 776 GVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKN-YITVDELR 820
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKEL-----------GTVMRSLGQN---PT 45
MA +LT D+ + E F D + DG + EL G SL QN
Sbjct: 320 MASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI 379
Query: 46 EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD--SEEELKEAFRVFDKDQNGFISA 103
E ++ ++ +D DG+G+I++ EF+ A + T S E ++ AF++FDKD +G IS
Sbjct: 380 EDQIDSLMPLLDMDGSGSIEYSEFI---ASAIDRTILLSRERMERAFKMFDKDGSGKIST 436
Query: 104 AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
EL + + + EE++ +I + D + DG++++ EFV+++
Sbjct: 437 KELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 73 MARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++
Sbjct: 1 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 60
Query: 130 DVDGDGQINYEEFVKVM 146
D + DG+I+Y+EF++ M
Sbjct: 61 DKNNDGRIDYDEFLEFM 77
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E + F +FDK+ DG I +EL ++++ G+ TE ++++++ + D + +G ID+ EFL
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 75
Query: 72 LM 73
M
Sbjct: 76 FM 77
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 49/65 (75%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
SEEEL FR+FDK+ +GFI EL ++ GE + +E+++++++++D + DG+I+++E
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 142 FVKVM 146
F+K+M
Sbjct: 68 FLKMM 72
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E F +FDK+ DG I +ELG ++R+ G++ E +++D++ + D + +G IDF EFL
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 70
Query: 72 LM 73
+M
Sbjct: 71 MM 72
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
E AF +FD +GDG I E +M+ +G+ P T+AE+++ + E D DGNG ID PEF+
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 71 NLMAR 75
+L+ +
Sbjct: 69 DLIKK 73
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-LTDEEVDEMIREADVDGDGQINY 139
D EEE+ AF+VFD + +G I E + +M +GE+ LTD EV+E ++EAD DG+G I+
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDI 64
Query: 140 EEFVKVM 146
EF+ ++
Sbjct: 65 PEFMDLI 71
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL 106
DA+G+G IDF EF +M + ++ ++ E++EA + D+D NG I E
Sbjct: 18 DANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADVDGDGQINYEEF 142
+EL++AFR FD + +G IS +ELR M L G ++ +++E+IR+ D++GDG++++EEF
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 143 VKVM 146
V++M
Sbjct: 67 VRMM 70
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGTIDFPE 68
+ E ++AF FD +GDG I+T EL MR L G +++++I +VD +G+G +DF E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 69 FLNLMAR 75
F+ +M+R
Sbjct: 66 FVRMMSR 72
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 50/65 (76%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+E
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 142 FVKVM 146
F++ M
Sbjct: 65 FLEFM 69
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E + F +FDK+ DG I +EL ++++ G+ TE ++++++ + D + +G ID+ EFL
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 67
Query: 72 LM 73
M
Sbjct: 68 FM 69
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 50/65 (76%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 142 FVKVM 146
F++ M
Sbjct: 63 FLEFM 67
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E + F +FDK+ DG I +EL ++++ G+ TE ++++++ + D + +G ID+ EFL
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 65
Query: 72 LM 73
M
Sbjct: 66 FM 67
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEF 69
S F DKD G I+ EL + + P ++ +I+ D + ++F EF
Sbjct: 26 SFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 85
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
+ + + D + FR +D+D +G I EL+ ++ G +L+D+ D +IR+
Sbjct: 86 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 138
Query: 130 DVDGDGQINYEEFVK 144
D G GQI +++F++
Sbjct: 139 DRQGRGQIAFDDFIQ 153
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
I++++ F +D+D G I EL + G ++ +I + D G G I F +F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
+ + + L + FR +D DQ+G+I +
Sbjct: 152 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 179
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 50/65 (76%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+E
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 142 FVKVM 146
F++ M
Sbjct: 64 FLEFM 68
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E + F +FDK+ DG I EL ++++ G+ TE ++++++ + D + +G ID+ EFL
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 66
Query: 72 LM 73
M
Sbjct: 67 FM 68
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEF 69
S F DKD G I+ EL + + P ++ +I+ D + ++F EF
Sbjct: 25 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 84
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
+ + + D + FR +D+D +G I EL+ ++ G +L+D+ D +IR+
Sbjct: 85 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 137
Query: 130 DVDGDGQINYEEFVK 144
D G GQI +++F++
Sbjct: 138 DRQGRGQIAFDDFIQ 152
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
I++++ F +D+D G I EL + G ++ +I + D G G I F +F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
+ + + L + FR +D DQ+G+I +
Sbjct: 151 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 178
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEF 69
S F DKD G I+ EL + + P ++ +I+ D + ++F EF
Sbjct: 4 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 63
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
+ + + D + FR +D+D +G I EL+ ++ G +L+D+ D +IR+
Sbjct: 64 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 116
Query: 130 DVDGDGQINYEEFVK 144
D G GQI +++F++
Sbjct: 117 DRQGRGQIAFDDFIQ 131
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
I++++ F +D+D G I EL + G ++ +I + D G G I F +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
+ + + L + FR +D DQ+G+I +
Sbjct: 130 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 157
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEF 69
S F DKD G I+ EL + + P ++ +I+ D + ++F EF
Sbjct: 7 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
+ + + D + FR +D+D +G I EL+ ++ G +L+D+ D +IR+
Sbjct: 67 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 119
Query: 130 DVDGDGQINYEEFVK 144
D G GQI +++F++
Sbjct: 120 DRQGRGQIAFDDFIQ 134
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
I++++ F +D+D G I EL + G ++ +I + D G G I F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
+ + + L + FR +D DQ+G+I +
Sbjct: 133 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEF 69
S F DKD G I+ EL + + P ++ +I+ D + ++F EF
Sbjct: 3 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 62
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
+ + + FR +D+D +G I EL+ ++ G +L+D+ D +IR+
Sbjct: 63 TGVWK-------YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 115
Query: 130 DVDGDGQINYEEFVK 144
D G GQI +++F++
Sbjct: 116 DRQGRGQIAFDDFIQ 130
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
I++++ F +D+D G I EL + G ++ +I + D G G I F +F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
+ + + L + FR +D DQ+G+I +
Sbjct: 129 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 156
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
F D +GDG ++ +E+ + S E LQ + +D DGNG ID EF A
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA- 64
Query: 77 MKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 133
+K+ D +E LK +++ D D +G ++ E +T +K E+V + I +AD +G
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEE----VTTFFKKFGYEKVVDQIMKADANG 120
Query: 134 DGQINYEEFV 143
DG I EEF+
Sbjct: 121 DGYITLEEFL 130
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
L+D+++ K + L D DGDG +T +E+ T + G ++ D I + DA+G+G I
Sbjct: 70 LSDEKVG-LKILYKLMDADGDGKLTKEEVTTFFKKFGYE----KVVDQIMKADANGDGYI 124
Query: 65 DFPEFL 70
EFL
Sbjct: 125 TLEEFL 130
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA-DVDGDGQINYEEFVKVMMA 148
F+ D + +G +S E++ +++ + +E++ ++I +A D+DG+G+I+ EF K A
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSS-KRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 50/65 (76%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
+EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+E
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 142 FVKVM 146
F++ M
Sbjct: 68 FLEFM 72
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
E + F +FDK+ DG I +EL ++++ G+ TE ++++++ + D + +G ID+ EFL
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 70
Query: 72 LM 73
M
Sbjct: 71 FM 72
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEF 69
S F DKD G I+ EL + + P ++ +I+ D + ++F EF
Sbjct: 7 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
+ + + D + FR +D+D +G I EL+ ++ G +L+D+ D +IR+
Sbjct: 67 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKF 119
Query: 130 DVDGDGQINYEEFVK 144
D G GQI +++F++
Sbjct: 120 DRQGRGQIAFDDFIQ 134
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
I++++ F +D+D G I EL + G ++ +I + D G G I F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
+ + + L + FR +D DQ+G+I +
Sbjct: 133 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLT 118
GT D+ F +L+ K K ++ ++KE F + DKDQ+GFI EL+ V+ G L
Sbjct: 22 GTFDYKRFFHLVGLKGK---TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78
Query: 119 DEEVDEMIREADVDGDGQINYEEFVKVM 146
D E ++ D D DG+I +EF K++
Sbjct: 79 DTETKALLAAGDSDHDGKIGADEFAKMV 106
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSL---GQNPTEAELQDMINEVDADGNG 62
TD Q+ KE F + DKD G I +EL V++ G++ + E + ++ D+D +G
Sbjct: 39 TDAQV---KEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 63 TIDFPEFLNLMAR 75
I EF ++A+
Sbjct: 96 KIGADEFAKMVAQ 108
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 27/157 (17%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQD-MINEVDADGNGTIDFPEFL 70
F D++ G ++ +L + +L NP L D +I DG+ +DFP F+
Sbjct: 30 RLHHRFRALDRNKKGYLSRMDLQQIG-ALAVNP----LGDRIIESFFPDGSQRVDFPGFV 84
Query: 71 NLMA--RKMKDTDSEEE--------------LKEAFRVFDKDQNGFISAAELRHVMT-NL 113
++A R ++D D+E + L AF+++D D++G IS E+ V+ +
Sbjct: 85 RVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMV 144
Query: 114 GEKLTDEEV----DEMIREADVDGDGQINYEEFVKVM 146
G ++T+E++ D ++EAD DGDG +++ EF K +
Sbjct: 145 GVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 26/163 (15%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQD-MINEVDADGNGT 63
+ QI+ F+ DK +G ++ ++ + L NP L D +IN ++G
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINP----LGDRIINAFFSEGEDQ 77
Query: 64 IDFPEFLNLMAR--------KMKDTDSEEELKE-------AFRVFDKDQNGFISAAELRH 108
++F F+ +A K KD + E L AFR++D D++ IS EL
Sbjct: 78 VNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQ 137
Query: 109 VMTNL-GEKLTDEEV----DEMIREADVDGDGQINYEEFVKVM 146
V+ + G ++DE++ D I+EAD DGD I++ EFVKV+
Sbjct: 138 VLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 13/107 (12%)
Query: 50 QDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV 109
+ + DA+G+GTIDF EF+ ++ + E++LK AF ++D D NG+IS AE+ +
Sbjct: 66 EHVFRTFDANGDGTIDFREFIIALSVTSRGK-LEQKLKWAFSMYDLDGNGYISKAEMLEI 124
Query: 110 MTNLG------------EKLTDEEVDEMIREADVDGDGQINYEEFVK 144
+ + E ++ +++ R+ D + DG+++ EEF++
Sbjct: 125 VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 82 SEEELKEAFRVFDKD-QNGFISAAELRHVMTNLGEKLTDEEVDEMI-READVDGDGQINY 139
+E E++E ++ F +D +G +S E + + N + E + R D +GDG I++
Sbjct: 23 TEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDF 82
Query: 140 EEFV 143
EF+
Sbjct: 83 REFI 86
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 45 TEAELQDMINEVDAD-GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISA 103
TE E+Q+ D +G + EF + D+ + + FR FD + +G I
Sbjct: 23 TEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDF 82
Query: 104 AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
E ++ ++++ D+DG+G I+ E ++++ A
Sbjct: 83 REFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MA++L++++I KE F + D D G IT EL ++ +G E+E++D+++ D D
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 61 NGTIDFPEFL 70
+GTID+ EF+
Sbjct: 73 SGTIDYGEFI 82
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 75 RKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
+ M + SEEE LKE F++ D D +G I+ EL+ + +G +L + E+ +++ AD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 132 DGDGQINYEEFV 143
D G I+Y EF+
Sbjct: 71 DKSGTIDYGEFI 82
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEF 69
S F DKD G I+ EL + + P ++ +I+ D + ++F EF
Sbjct: 4 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 63
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
+ + + D + FR +D+D +G I EL+ ++ G +L+D+ D +IR+
Sbjct: 64 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKF 114
Query: 130 DVDGDGQINYEEFVK 144
D G GQI +++F++
Sbjct: 115 DRQGRGQIAFDDFIQ 129
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
I++++ F +D+D G I EL + G ++ +I + D G G I F +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 127
Query: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAA 104
+ + + L + FR +D DQ+G+I +
Sbjct: 128 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 155
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 26/163 (15%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQD-MINEVDADGNGT 63
+ QI+ F+ DK +G ++ ++ + L NP L D +IN +G
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINP----LGDRIINAFFPEGEDQ 77
Query: 64 IDFPEFLNLMAR--------KMKDTDSEEELKE-------AFRVFDKDQNGFISAAELRH 108
++F F+ +A K KD + E L AFR++D D++ IS EL
Sbjct: 78 VNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQ 137
Query: 109 VMTNL-GEKLTDEEV----DEMIREADVDGDGQINYEEFVKVM 146
V+ + G ++DE++ D I+EAD DGD I++ EFVKV+
Sbjct: 138 VLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDFPEFL 70
AF L+D D D I+ EL V+R + G N ++ +L + I E D DG+ I F EF+
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 71 NLMAR 75
++ +
Sbjct: 178 KVLEK 182
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
F D +GDG ++ +E+ + E LQ + +DADGNG ID EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 77 MKD--TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD 134
+D + LK +++ D D +G ++ E+ T+ +K E+V E + +AD +GD
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKADANGD 121
Query: 135 GQINYEEFV 143
G I EEF+
Sbjct: 122 GYITLEEFL 130
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
+ E+D +G+G + + E +++K + +E+ L+ F+ D D NG I E
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 112 NL-GEKLTDEEV--DEMIREADVDGDGQINYEE 141
++ G+ L+D+++ + + DVDGDG++ EE
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 125 MIREADVDGDGQINYEEFVKVMMAK 149
+ +E DV+GDG ++YEE VK ++K
Sbjct: 5 LFKEIDVNGDGAVSYEE-VKAFVSK 28
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
F D +GDG ++ +E+ + E LQ + +DADGNG ID EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 77 MKD--TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD 134
+D + LK +++ D D +G ++ E +T+ +K E+V E + +AD +GD
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE----VTSFFKKHGIEKVAEQVMKADANGD 121
Query: 135 GQINYEEFV 143
G I EEF+
Sbjct: 122 GYITLEEFL 130
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
+ E+D +G+G + + E +++K + +E+ L+ F+ D D NG I E
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 112 NL-GEKLTDEEV--DEMIREADVDGDGQINYEE 141
++ G+ L+D+++ + + DVDGDG++ EE
Sbjct: 64 SIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 125 MIREADVDGDGQINYEEFVKVMMAK 149
+ +E DV+GDG ++YEE VK ++K
Sbjct: 5 LFKEIDVNGDGAVSYEE-VKAFVSK 28
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
A + D+Q E E F D DG G I+ EL + S G + A + +++ D + +
Sbjct: 20 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 77
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
G I F EF +L + ++E FR D +G + + E+R + + G +++++
Sbjct: 78 GEITFDEFKDLHHFIL-------SMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQT 130
Query: 122 VDEMIREADVDGDGQINYEEFVKV 145
++R+ D G + ++++V++
Sbjct: 131 FQALMRKFDRQRRGSLGFDDYVEL 154
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 18/112 (16%)
Query: 49 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
++ M D +G+ TIDF E++ + ++ T E +LK F+++DKD+NG I EL
Sbjct: 61 VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT-LEHKLKWTFKIYDKDRNGCIDRQELLD 119
Query: 109 VMTNL----------------GEKLTDEE-VDEMIREADVDGDGQINYEEFV 143
++ ++ G+ LT EE VD + D +GDGQ++ EFV
Sbjct: 120 IVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
MA + T I++ + F FD +GDG I++ ELG +++LG + T E++ M+ E+D DG
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDG 59
Query: 61 NGTIDFPEFLNL 72
+G I F EF +
Sbjct: 60 DGFISFDEFTDF 71
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
F+ FD + +G IS++EL + LG +T +EV M+ E D DGDG I+++EF A
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 82 SEEELKEAFRVF---DKDQNGFISAAELRHVMTNLGEKLTD--EEVDEMIREADVDGDGQ 136
S EE+K AF VF + D N IS EL+ VM LG L +DEMI E D +GDG+
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQ-ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 137 INYEEFVKVMMAK 149
+++EEF+ VMM K
Sbjct: 62 VSFEEFL-VMMKK 73
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 12 EFKEAFSLFD-KDGD-GCITTKELGTVMRSLGQNPTE--AELQDMINEVDADGNGTIDFP 67
E K AF +F K+GD I+ +EL VM++LG + + + L +MI EVD +G+G + F
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Query: 68 EFLNLMAR 75
EFL +M +
Sbjct: 66 EFLVMMKK 73
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 138
S +LKE FR+ D DQ+GFI EL++ + LT E + AD DGDG+I
Sbjct: 39 SSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIG 98
Query: 139 YEEF 142
EEF
Sbjct: 99 AEEF 102
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQ---DMINEVDADGN------ 61
S+F E + FD DG G + KEL +++ L Q +A L+ +M VD G
Sbjct: 16 SQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKI 75
Query: 62 GTIDFPEFLN-----LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK 116
G ++ L L+ + + S EE + +R +D D +GFI EL++ + +L EK
Sbjct: 76 GIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEK 135
Query: 117 LTD--------EEVDEMIREADVDGDGQINYEEFVKVM 146
E D M++ D + DG++ E +++
Sbjct: 136 ANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 23/124 (18%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTE-------AELQD-MINEVDADGNGT 63
EF + + +D D G I T+EL ++ L + + AE D M+ D++ +G
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGK 163
Query: 64 IDFPEFLNLMARKMKDTDS-----------EEELKEAFRVFDKDQNGFISAAELRHVMTN 112
++ E MAR + ++ +E +AF ++D+D NG+I EL ++ +
Sbjct: 164 LELTE----MARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKD 219
Query: 113 LGEK 116
L EK
Sbjct: 220 LCEK 223
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLT 118
G+ + +F L+ K S ++K+ F+ D D +GFI EL+ V+ + G LT
Sbjct: 23 GSFNHKKFFALVGLKAM---SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT 79
Query: 119 DEEVDEMIREADVDGDGQINYEEF 142
D E ++ AD DGDG+I +EF
Sbjct: 80 DAETKAFLKAADKDGDGKIGIDEF 103
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSL---GQNPTEAELQDMINEVDADGNGTIDFPEFL 70
K+ F D D G I +EL V++S G++ T+AE + + D DG+G I EF
Sbjct: 45 KKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFE 104
Query: 71 NLM 73
L+
Sbjct: 105 TLV 107
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 72
F FD +GDG I+ EL +R+LG + E+Q M+ E+D DG+G IDF EF++
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFISF 63
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
++++ F+ FD + +G IS +EL + LG DE V M+ E D DGDG I++ EF+
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 61
Query: 144 KVMMA 148
A
Sbjct: 62 SFCNA 66
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 72
F FD +GDG I+ EL +R+LG + E+Q M+ E+D DG+G IDF EF++
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFISF 62
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
++++ F+ FD + +G IS +EL + LG DE V M+ E D DGDG I++ EF+
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 60
Query: 144 KVMMA 148
A
Sbjct: 61 SFCNA 65
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 138
S +++K+AF + D+D++GFI EL+ + N LTD E ++ D DGDG+I
Sbjct: 40 SADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 99
Query: 139 YEEFVKVMMA 148
+EF ++ A
Sbjct: 100 VDEFTALVKA 109
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGN 61
LT + K+AF++ D+D G I EL +++ + T+ E + + D+DG+
Sbjct: 36 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 95
Query: 62 GTIDFPEFLNLM 73
G I EF L+
Sbjct: 96 GKIGVDEFTALV 107
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Query: 22 KDGDGCITTKELGTVMRSLGQNPT---EAELQDMINEVDADGNGTIDFPEFLNLMARKMK 78
K +G + ++ R LG P+ E +++D+ + ++ + ++L + +
Sbjct: 7 KSSNGKLRIEDASHNARKLGLAPSSTDEKKIRDLYGD-------SLTYEQYLEYLTXCVH 59
Query: 79 DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
D D+ EEL + F FD + +GF++ + ++++T G+ LT++E ++ + + +IN
Sbjct: 60 DRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNA--FSSEDRIN 117
Query: 139 YEEFVKVMM 147
Y+ F + ++
Sbjct: 118 YKLFCEDIL 126
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL----- 106
+ N DADGNG I F +F+ ++ ++ T E+LK AF ++D +++G I+ E+
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGT-VHEKLKWAFNLYDINKDGCITKEEMLAIMK 192
Query: 107 -------RHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
RH L E E V+ ++ D + DG + +EF+
Sbjct: 193 SIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFL 236
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSL 40
+ K AF+L+D + DGCIT +E+ +M+S+
Sbjct: 166 KLKWAFNLYDINKDGCITKEEMLAIMKSI 194
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
+E + F FD +GDG I+ ELG +++LG + T E++ M+ E+D DG+G I F EF
Sbjct: 9 AERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEFT 67
Query: 71 NL 72
+
Sbjct: 68 DF 69
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
E + F+ FD + +G ISAAEL + LG +T +EV M+ E D DGDG I+++EF
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEFT 67
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 1 MADQLT--DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDA 58
MA +L+ ++ I E F D + +G ++ +E+ TV+ S+G + ++ ++ +D
Sbjct: 27 MAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDI 84
Query: 59 DGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAEL 106
+ G I + EF+ R K+ +S LK AF DKD++G+IS +++
Sbjct: 85 NDRGNITYTEFMAGCYR-WKNIESTF-LKAAFNKIDKDEDGYISKSDI 130
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 73 MARKMKDTDSE-EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
MA ++ ++ + + E F D + NG +S E+ V+ ++G K D ++ +++ D+
Sbjct: 27 MAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDI 84
Query: 132 DGDGQINYEEFV 143
+ G I Y EF+
Sbjct: 85 NDRGNITYTEFM 96
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 44 PTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISA 103
PTE + M+ E + + + L +MA KM + EL + F + + I+A
Sbjct: 3 PTE---KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITA 59
Query: 104 AELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
LR LG E ++ E+ M+RE D+DGDG +N EF +M+
Sbjct: 60 ESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMV 104
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 68
+SE + FSL IT + L LG + ++ + Q M+ E D DG+G ++ E
Sbjct: 39 VSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTE 98
Query: 69 FLNLMAR 75
F LM R
Sbjct: 99 FCVLMVR 105
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 138
S +++K+AF + D+D++GFI EL+ + N LTD E ++ D DGDG+I
Sbjct: 39 SADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 98
Query: 139 YEEFVKVMMA 148
+E+ ++ A
Sbjct: 99 VDEWTALVKA 108
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGN 61
LT + K+AF++ D+D G I EL +++ + T+ E + + D+DG+
Sbjct: 35 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 62 GTIDFPEFLNLM 73
G I E+ L+
Sbjct: 95 GKIGVDEWTALV 106
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQ 136
+ S +++K+AF V D+D++GFI EL+ + N LTD E + + D DGDG
Sbjct: 37 SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGM 96
Query: 137 INYEEFVKVMMA 148
I +EF ++ A
Sbjct: 97 IGVDEFAAMIKA 108
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGN 61
L + + K+AF + D+D G I EL +++ + T+AE + + + D DG+
Sbjct: 35 LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 94
Query: 62 GTIDFPEFLNLM 73
G I EF ++
Sbjct: 95 GMIGVDEFAAMI 106
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMIN 54
K+ F+LFDK G G I LG +R++G NPT +QD+IN
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIIN 47
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
F++FDKD +G I +E TV+ + + E +L D + +G I F E L ++A
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 77 MK-----------DTDSEEELKEAFRVFDKDQNGFISAAELR 107
K + E +K+ F++ DK+++G+I+ E R
Sbjct: 129 YKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
+ D D NG I F EF+ +++ + T EE+L AF ++D + +G+I+ E+ ++
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGT-LEEKLSWAFELYDLNHDGYITFDEMLTIVA 126
Query: 112 N----LGEKLT---DEEVDEM-----IREADVDGDGQINYEEF 142
+ +G +T DE EM + D + DG I +EF
Sbjct: 127 SVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
F VFDKD NGFI E V++ +E++ D++ DG I ++E + ++ +
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
S +++K+AF D+D++GFI EL+ V LTD E ++ D DGDG I
Sbjct: 40 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 139 YEEFVKVMMA 148
EE+V ++ A
Sbjct: 100 VEEWVALVKA 109
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGT---VMRSLGQNPTEAELQDMINEVDADGN 61
L+ + K+AF D+D G I EL V ++ + T+AE + + D+DG+
Sbjct: 36 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 95
Query: 62 GTIDFPEFLNLM 73
G I E++ L+
Sbjct: 96 GAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
S +++K+AF D+D++GFI EL+ V LTD E ++ D DGDG I
Sbjct: 39 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 98
Query: 139 YEEFVKVMMA 148
EE+V ++ A
Sbjct: 99 VEEWVALVKA 108
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGT---VMRSLGQNPTEAELQDMINEVDADGN 61
L+ + K+AF D+D G I EL V ++ + T+AE + + D+DG+
Sbjct: 35 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 94
Query: 62 GTIDFPEFLNLM 73
G I E++ L+
Sbjct: 95 GAIGVEEWVALV 106
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK---LTD 119
+ ++ F + + K D ++K+ F + D+D++GFI EL+ + N LT
Sbjct: 23 SFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 79
Query: 120 EEVDEMIREADVDGDGQINYEEFVKVMMA 148
E + D DGDG+I EEF ++ A
Sbjct: 80 AETKAFLAAGDTDGDGKIGVEEFQSLVKA 108
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGNG 62
T DQI K+ F + D+D G I +EL +++ + T AE + + D DG+G
Sbjct: 39 TPDQI---KKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 95
Query: 63 TIDFPEFLNLM 73
I EF +L+
Sbjct: 96 KIGVEEFQSLV 106
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 10 ISEFKEAFSLFDKDG-----DGCITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
+SE + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 13 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 70
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT--------NLGE 115
+ F EF ++ + ++++ +F+++D Q GFI E++ ++ NL +
Sbjct: 71 LGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKD 130
Query: 116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
+ ++ +D+ EAD DG+I+ EE+ +++
Sbjct: 131 TVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 10 ISEFKEAFSLFDKDG-----DGCITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGT 63
+SE + + LF K DG I +E + N E+ D + ++ D NG
Sbjct: 44 VSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGI 101
Query: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT--------NLGE 115
+ F EF ++ + ++++ +F+++D Q GFI E++ ++ NL +
Sbjct: 102 LGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKD 161
Query: 116 KLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
+ ++ +D+ EAD DG+I+ EE+ +++
Sbjct: 162 TVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 193
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK---LTD 119
+ ++ F + + K D ++K+ F + D+D++GFI EL+ + N LT
Sbjct: 24 SFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 80
Query: 120 EEVDEMIREADVDGDGQINYEEFVKVMMA 148
E + D DGDG+I EEF ++ A
Sbjct: 81 AETKAFLAAGDTDGDGKIGVEEFQSLVKA 109
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGNG 62
T DQI K+ F + D+D G I +EL +++ + T AE + + D DG+G
Sbjct: 40 TPDQI---KKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 96
Query: 63 TIDFPEFLNLM 73
I EF +L+
Sbjct: 97 KIGVEEFQSLV 107
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 49 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
++ M D + +G IDF E++ ++ +K +++L+ F+++D D NG I EL +
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGK-VDQKLRWYFKLYDVDGNGCIDRGELLN 112
Query: 109 VMTNL------GEKLTDEEVDEMIR-EADVDGDGQINYEEFV 143
++ + E +T EE M+ + D++GDG+++ EEF+
Sbjct: 113 IIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFM 154
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 43/88 (48%)
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
+G + EF K + + +++ F FD +++G+I E ++ + + D+
Sbjct: 29 SGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQ 88
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
++ + DVDG+G I+ E + ++ A
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKA 116
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
S +++K+AF V D+D++GFI EL+ V + LTD E ++ D DGDG I
Sbjct: 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 139 YEEFVKVMMA 148
+E+ ++ A
Sbjct: 100 VDEWAALVKA 109
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGN 61
LT + K+AF + D+D G I EL ++ T+AE + + D+DG+
Sbjct: 36 LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGD 95
Query: 62 GTIDFPEFLNLM 73
G I E+ L+
Sbjct: 96 GAIGVDEWAALV 107
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTD 119
+ D +F ++ K K D ++K+ F + DKD++GFI EL ++ L+
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA 79
Query: 120 EEVDEMIREADVDGDGQINYEEF 142
+E ++ D DGDG+I EEF
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEF 102
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGNGTIDFPEFL 70
K+ F + DKD G I ELG++++ + + E + ++ D DG+G I EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 71 NLMA 74
L+A
Sbjct: 104 TLVA 107
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE---KLTD 119
+ D +F ++ K K D ++K+ F + DKD++GFI EL ++ L+
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSA 79
Query: 120 EEVDEMIREADVDGDGQINYEEF 142
+E ++ D DGDG+I EEF
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEF 102
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGNGTIDFPEFL 70
K+ F + DKD G I ELG++++ + + E + ++ D DG+G I EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 71 NLMA 74
L+A
Sbjct: 104 TLVA 107
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 26 GCITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEE 84
G T E T++ G N + + N D + +G +DF EF+ + M++ E+
Sbjct: 35 GLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEK-MEQ 93
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMT-----NLGEKLTDEE-VDEMIREADVDGDGQIN 138
+LK F+++D D NG I EL + N + L+ EE ++ + + D++ DG++
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELT 153
Query: 139 YEEFVKVM 146
EEF+ M
Sbjct: 154 LEEFINGM 161
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 41/81 (50%)
Query: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
EF L+ + + + + + + + FD +++GF+ E + + ++ ++++ +
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 128 EADVDGDGQINYEEFVKVMMA 148
D DG+G I+ E + + MA
Sbjct: 101 LYDADGNGSIDKNELLDMFMA 121
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSL----GQNPTEAE--LQDMINEVDADGNGTID 65
+ K F L+D DG+G I EL + ++ GQ E + + +++D + +G +
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELT 153
Query: 66 FPEFLNLMARKMKDTDSEEELKEAF 90
EF+N MA KD D E + ++F
Sbjct: 154 LEEFINGMA---KDQDLLEIVYKSF 175
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 21 DKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT 80
+K G I+ R LG P+ + + I E+ D + + ++L ++ + D
Sbjct: 25 EKSSGGKISIDNASYNARKLGLAPSSID-EKKIKELYGDN---LTYEQYLEYLSICVHDK 80
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
D+ EEL + F FD + G+++ +++++++T G+ LTD+E
Sbjct: 81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEA 122
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTD 119
+ D +F ++ K K S +++K+ F + DKD++GFI EL ++ L+
Sbjct: 23 SFDHKKFFQMVGLKKK---SADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSA 79
Query: 120 EEVDEMIREADVDGDGQINYEEF 142
+E ++ D DGDG+I EEF
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEF 102
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGNGTIDFPEFL 70
K+ F + DKD DG I ELG++++ + + E + ++ D DG+G I EF
Sbjct: 44 KKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 71 NLMA 74
L+A
Sbjct: 104 TLVA 107
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 17/143 (11%)
Query: 13 FKEAFSLFDKDGDGCITTKELGTVM-------RSLGQNPTEAE-LQDMINEVDADGNGTI 64
FK FS D D I+ KEL T++ + L N E + M+N +D DGNG +
Sbjct: 536 FKTLFSKLAGD-DMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKL 594
Query: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
EF N++ ++++ + FR FD D++G +SA E+R + G KL ++ +
Sbjct: 595 GLVEF-NILWNRIRNYLT------IFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLHQ 646
Query: 125 MIREADVDGDGQINYEEFVKVMM 147
+I D + I+++ FV+ ++
Sbjct: 647 VIVARFADDELIIDFDNFVRCLV 669
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNG 62
+ T++++S + ++F + G IT +E T+ + + +A Q + DA+ +G
Sbjct: 22 KFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 79
Query: 63 TIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
T+DF E+ ++A M + ++L+ AF ++D D NG IS E+ ++T + + ++ E+
Sbjct: 80 TLDFKEY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 137
Query: 122 VDEM 125
+
Sbjct: 138 TKHL 141
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE--LRHVMTNLGEKLT 118
+G I EF + ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 98
Query: 119 DEEVDEMIREADVDGDGQINYEEFVKVMMA 148
+++++ DVDG+G I+ E ++++ A
Sbjct: 99 NQKLEWAFSLYDVDGNGTISKNEVLEIVTA 128
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNG 62
+ T++++S + ++F + G IT +E T+ + + +A Q + DA+ +G
Sbjct: 21 KFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
T+DF E+ ++A M + ++L+ AF ++D D NG IS E+ ++T + + ++ E+
Sbjct: 79 TLDFKEY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VDEM 125
+
Sbjct: 137 TKHL 140
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE--LRHVMTNLGEKLT 118
+G I EF + ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 97
Query: 119 DEEVDEMIREADVDGDGQINYEEFVKVMMA 148
+++++ DVDG+G I+ E ++++ A
Sbjct: 98 NQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNG 62
+ T++++S + ++F + G IT +E T+ + + +A Q + DA+ +G
Sbjct: 21 KFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
T+DF E+ ++A M + ++L+ AF ++D D NG IS E+ ++T + + ++ E+
Sbjct: 79 TLDFKEY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VDEM 125
+
Sbjct: 137 TKHL 140
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE--LRHVMTNLGEKLT 118
+G I EF + ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 97
Query: 119 DEEVDEMIREADVDGDGQINYEEFVKVMMA 148
+++++ DVDG+G I+ E ++++ A
Sbjct: 98 NQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNG 62
+ T++++S + ++F + G IT +E T+ + + +A Q + DA+ +G
Sbjct: 21 KFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
T+DF E+ ++A M + ++L+ AF ++D D NG IS E+ ++T + + ++ E+
Sbjct: 79 TLDFKEY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VDEM 125
+
Sbjct: 137 TKHL 140
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE--LRHVMTNLGEKLT 118
+G I EF + ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 97
Query: 119 DEEVDEMIREADVDGDGQINYEEFVKVMMA 148
+++++ DVDG+G I+ E ++++ A
Sbjct: 98 NQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
+ N DAD NG IDF EF+ ++ + + ++L AF+++D D NG IS E+ ++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSR-GELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
Query: 112 NLGE------KLTDEE------VDEMIREADVDGDGQINYEEFV 143
+ + KL ++E V+++ D + DGQ+ EEF
Sbjct: 127 AIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 43/88 (48%)
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
+G ++ EF + + D + F VFD D+NG+I E ++ ++
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND 99
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
++ + D+D +G I+Y+E ++++ A
Sbjct: 100 KLIWAFQLYDLDNNGLISYDEMLRIVDA 127
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 35/174 (20%)
Query: 1 MADQLTDD-----QISEFKEAFSLFDKDGDGCITTKEL-----GTVMRSLGQNPTEAELQ 50
M+ +LT D I K F+ D + +G I+ E+ V+ +LG P +A+
Sbjct: 1 MSVKLTPDFDNPKWIGRHKHMFNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRH 60
Query: 51 DMINEVDADGNGT-----IDFPEFLNLMARKMKDTDSEEELKEA---------------F 90
E G G ++PE++ R + EELK F
Sbjct: 61 KDAVEAFFGGAGMKYGVETEWPEYIEGWKRL-----ASEELKRYSKNQITLIRLWGDALF 115
Query: 91 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
+ DKDQNG IS E + + G + E+ +E R D+D GQ++ +E +
Sbjct: 116 DIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 4 QLTDDQISEFKEAFSLFDKDG-----DGCITTKELGTVMRSLGQNPTEAEL-QDMINEV- 56
+T + E + + LF K DG I +E +L +N L D I +V
Sbjct: 27 SVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQL---ALFRNRNRRNLFADRIFDVF 83
Query: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN---- 112
D NG I+F EF+ + E++K AF+++D Q GFI EL+ ++
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 113 ----LGEKLTDEEVDEMIREADVDGDGQINYEEF 142
L E + + VD+ +AD DG+I+ +E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQ 136
+ S +++K+AF + +D++GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 137 INYEEFVKVMMA 148
I +E+ ++ A
Sbjct: 97 IGVDEWTALVKA 108
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGN 61
LT + K+AF++ +D G I EL +++ + T+ E + + D+DG+
Sbjct: 35 LTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 62 GTIDFPEFLNLM 73
G I E+ L+
Sbjct: 95 GKIGVDEWTALV 106
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+D+ ++ FKE + FD +G+G I L ++ LG T EL+ +I EV +
Sbjct: 23 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSG 82
Query: 62 GTIDFPEFLNLMARK 76
T +P+FL +M K
Sbjct: 83 ETFSYPDFLRMMLGK 97
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 4 QLTDDQISEFKEAFSLFDKDG-----DGCITTKELGTVMRSLGQNPTEAEL-QDMINEV- 56
+T + E + + LF K DG I +E +L +N L D I +V
Sbjct: 27 SVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQL---ALFRNRNRRNLFADRIFDVF 83
Query: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN---- 112
D NG I+F EF+ + E++K AF+++D Q GFI EL+ ++
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 113 ----LGEKLTDEEVDEMIREADVDGDGQINYEEF 142
L E + + VD+ +AD DG+I+ +E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNG 62
+ T++++S + ++F + G IT +E T+ + + +A Q + DA+ +G
Sbjct: 21 KFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
T+DF ++ ++A M + ++L+ AF ++D D NG IS E+ ++T + + ++ E+
Sbjct: 79 TLDFKQY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VDEM 125
+
Sbjct: 137 TKHL 140
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG---FISAAELRHVMTNLGEKL 117
+G I EF + ++ + D + + FR FD + +G F H MT+ G+
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALH-MTSAGK-- 96
Query: 118 TDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
T+++++ DVDG+G I+ E ++++ A
Sbjct: 97 TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNG 62
+ T++++S + ++F + G IT +E T+ + + +A Q + DA+ +G
Sbjct: 21 KFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDG 78
Query: 63 TIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
T+DF ++ ++A M + ++L+ AF ++D D NG IS E+ ++T + + ++ E+
Sbjct: 79 TLDFKQY--VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPED 136
Query: 122 VDEM 125
+
Sbjct: 137 TKHL 140
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG---FISAAELRHVMTNLGEKL 117
+G I EF + ++ + D + + FR FD + +G F H MT+ G+
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALH-MTSAGK-- 96
Query: 118 TDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
T+++++ DVDG+G I+ E ++++ A
Sbjct: 97 TNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 138
S ++K+ FR D DQ+G++ EL++ + +LT+ E ++ AD DGDG+I
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIG 98
Query: 139 YEEFVKVMMA 148
+EF +++ +
Sbjct: 99 ADEFQEMVHS 108
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGNGTIDFP 67
S+ K+ F D D G + EL ++ + TE+E + +++ D DG+G I
Sbjct: 41 SQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGAD 100
Query: 68 EFLNLM 73
EF ++
Sbjct: 101 EFQEMV 106
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
F D+DG + E + LG +AE + + + D +G+GT+D EFL +
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP 102
Query: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELR-------HVMTNLGEKLTDEEVDEMIREA 129
M E + AF D+ +G ++ +LR H GE DE + +
Sbjct: 103 MSQA-REAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNF 161
Query: 130 D-VDGDGQINYEEF 142
D + DGQ+ EF
Sbjct: 162 DSSEKDGQVTLAEF 175
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
L FR D+D + + A E R + LG L E + + R+ D +G G ++ EEF++
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 146 M 146
+
Sbjct: 99 L 99
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 138
S ++K+ FR D DQ+G++ EL+ + +LT+ E ++ AD DGDG+I
Sbjct: 40 SANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
Query: 139 YEEF 142
EEF
Sbjct: 100 AEEF 103
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMR---SLGQNPTEAELQDMINEVDADGNGTIDFP 67
++ K+ F D D G + +EL ++ S + TE+E + ++ D DG+G I
Sbjct: 42 NQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
Query: 68 EF 69
EF
Sbjct: 102 EF 103
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
+D+ ++ FKE + FD +G+G I L ++ LG T EL+ +I EV +
Sbjct: 42 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSG 101
Query: 62 GTIDFPEFLNLMARK 76
T +P+FL +M K
Sbjct: 102 ETFSYPDFLRMMLGK 116
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTD 119
+ D +F ++ K K D ++K+ F + DKD++GFI EL ++ L+
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA 79
Query: 120 EEVDEMIREADVDGDGQINYEEF 142
+E ++ D DG G+I EEF
Sbjct: 80 KETKTLMAAGDKDGSGKIEVEEF 102
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGNGTIDFPEFL 70
K+ F + DKD G I ELG++++ + + E + ++ D DG+G I+ EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEFS 103
Query: 71 NLMA 74
L+A
Sbjct: 104 TLVA 107
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 87 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
K F FDK+++G +S E R V T E++ + E DVDG+G++N +EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
S K F FDK+ DG ++ E V + T+ ++ E+D DGNG ++ EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Query: 71 NLMARKM 77
+ + + +
Sbjct: 61 SCIEKML 67
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 138
S +++K+AF + +D++GFI EL+ + N LTD E ++ D DGDG+I
Sbjct: 39 SADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 98
Query: 139 YEEFVKVMMA 148
+++ ++ A
Sbjct: 99 VDDWTALVKA 108
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 29 TTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKE 88
T KE+ + G + T A + N D D NG + F +F+ ++ ++ T +E+L
Sbjct: 86 TFKEIYSQFFPQGDSTTYAHF--LFNAFDTDHNGAVSFEDFIKGLSILLRGT-VQEKLNW 142
Query: 89 AFRVFDKDQNGFISAAELRHVMTN------------LGEKLTDEEVDEMIREADVDGDGQ 136
AF ++D +++G+I+ E+ +M L E + V+ ++ D + DG
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGV 202
Query: 137 INYEEFV 143
+ +EF+
Sbjct: 203 VTIDEFI 209
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 38/88 (43%)
Query: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
+G ++ F + ++ DS F FD D NG +S + ++ L E
Sbjct: 79 SGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQE 138
Query: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
+++ D++ DG I EE + +M A
Sbjct: 139 KLNWAFNLYDINKDGYITKEEMLDIMKA 166
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRS------------LGQNPTEAELQDMINEVDADGNGT 63
AF+L+D + DG IT +E+ +M++ L ++ ++ ++D + +G
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGV 202
Query: 64 IDFPEFL 70
+ EF+
Sbjct: 203 VTIDEFI 209
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADVDGDGQIN 138
S +++K+ F + DKD++GFI EL ++ L+ +E ++ D DGDG+I
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 139 YEEF 142
EEF
Sbjct: 63 VEEF 66
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNP---TEAELQDMINEVDADGNGTIDFPEFL 70
K+ F + DKD G I ELG++++ + + E + ++ D DG+G I EF
Sbjct: 8 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 67
Query: 71 NLMA 74
L+A
Sbjct: 68 TLVA 71
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
M++ +D D +GT+ F EF L A ++ F FD D++G + EL+ +T
Sbjct: 78 MVSMLDRDMSGTMGFNEFKELWA-------VLNGWRQHFISFDTDRSGTVDPQELQKALT 130
Query: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
+G +L+ + V+ + + +G+I +++++ +
Sbjct: 131 TMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCV 164
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GEKLTD 119
+ D +F ++ K K D ++K+ F + DKD++GFI EL ++ L+
Sbjct: 24 SFDHKKFFQMVGLKKKSAD---DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSA 80
Query: 120 EEVDEMIREADVDGDGQINYEEF 142
+E ++ D DGDG+I +EF
Sbjct: 81 KETKMLMAAGDKDGDGKIGVDEF 103
Score = 32.7 bits (73), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSL---GQNPTEAELQDMINEVDADGNGTIDFPEFL 70
K+ F + DKD G I ELG +++ ++ + E + ++ D DG+G I EF
Sbjct: 45 KKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFS 104
Query: 71 NLMA 74
L+A
Sbjct: 105 TLVA 108
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 41 GQNPTEAE-LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 99
G P E + M++ +D D +GT+ F EF L A ++ F FD D++G
Sbjct: 35 GYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA-------VLNGWRQHFISFDSDRSG 87
Query: 100 FISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
+ EL+ +T +G +L + V+ + + G+I +++++ +
Sbjct: 88 TVDPQELQKALTTMGFRLNPQTVNSIAKRYST--SGKITFDDYIACCV 133
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAE-----LQDMINEVDA 58
++ K F+ D +G+G IT E+ + + LG P + + ++ ++
Sbjct: 21 WVNRHKFMFNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIGL 80
Query: 59 DGNGTIDFPEFLNLMAR------KMKDTDSEEELKE----AFRVFDKDQNGFISAAELRH 108
D ++FP F+N K+ + + ++ F +FDKD +G IS E +
Sbjct: 81 DYGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKT 140
Query: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
G +DE+ ++ + D+D G+++ +E + +
Sbjct: 141 YGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTRQHLG 180
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 17 FSLFDKDGDGCI-----------TTKELGTVMRS-LGQ---NPTEAELQDMINEVDADGN 61
F+ FD+DG+G I E G RS GQ EA Q + D DG+
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 62 GTIDFPEFLNLMARKMKDTD------SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 115
I EF+ ++++D + L A V D D +G ++ A+ +T G
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARALTAFG- 128
Query: 116 KLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
+ ++ + D DGDG++ E V
Sbjct: 129 -VPEDLARQAAAALDTDGDGKVGETEIVPAF 158
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 75
A + D DGDG +T + + + G P + Q +D DG+G + E + AR
Sbjct: 103 ALGVADTDGDGAVTVADTARALTAFGV-PEDLARQ-AAAALDTDGDGKVGETEIVPAFAR 160
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 35/153 (22%)
Query: 3 DQLTDDQISEFKEAF-SLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
D++TD+++ + K++F S +D DG + +EL + +N
Sbjct: 48 DKITDERVQQIKKSFXSAYDATFDGRLQIEELANXILPQEEN------------------ 89
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL----GEKL 117
FL L+ R+ D+ E + +R +D D +G+ISAAEL++ + +L +K+
Sbjct: 90 -------FL-LIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKI 141
Query: 118 T----DEEVDEMIREADVDGDGQINYEEFVKVM 146
DE D + D + DG+++ + +++
Sbjct: 142 PPNKLDEYTDAXXKIFDKNKDGRLDLNDLARIL 174
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---GE--KL 117
++ F +FL+L++ + + AFR+FD D +G ++ +L ++ L GE +L
Sbjct: 108 SLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRL 167
Query: 118 TDEE----VDEMIREADVDGDGQINYEEFVKVM 146
+ E +D ++ E+D+D DG IN EF V+
Sbjct: 168 SASEMKQLIDNILEESDIDRDGTINLSEFQHVI 200
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSL---GQNP--TEAELQDMIN- 54
+D T D S + AF +FD D DG + ++L ++ L G++ + +E++ +I+
Sbjct: 121 FSDTATPDIKSHY--AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN 178
Query: 55 ---EVDADGNGTIDFPEFLNLMAR 75
E D D +GTI+ EF ++++R
Sbjct: 179 ILEESDIDRDGTINLSEFQHVISR 202
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
M++ +D D +GT+ F EF L A ++ F D D++G + EL+ +T
Sbjct: 78 MVSMLDRDMSGTMGFNEFKELWA-------VLNGWRQHFISLDTDRSGTVDPQELQKALT 130
Query: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
+G +L+ + V+ + + +G+I +++++ +
Sbjct: 131 TMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCV 164
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 58 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL---G 114
+ ++ F +FL+L++ + + AFR+FD D +G ++ +L ++ L G
Sbjct: 72 SPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEG 131
Query: 115 E--KLTDEE----VDEMIREADVDGDGQINYEEFVKVM 146
E +L+ E +D ++ E+D+D DG IN EF V+
Sbjct: 132 EDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 169
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSL---GQNP--TEAELQDMIN- 54
+D T D S + AF +FD D DG + ++L ++ L G++ + +E++ +I+
Sbjct: 90 FSDTATPDIKSHY--AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN 147
Query: 55 ---EVDADGNGTIDFPEFLNLMAR 75
E D D +GTI+ EF ++++R
Sbjct: 148 ILEESDIDRDGTINLSEFQHVISR 171
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 11/77 (14%)
Query: 73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL--GEKLTDEEVDE----MI 126
MA K+K EL+ AF+ D + +G+++A EL+ M L + L+ ++V E +I
Sbjct: 1 MACKVK-----AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLI 55
Query: 127 READVDGDGQINYEEFV 143
+ AD + DG+I+ EEF+
Sbjct: 56 KMADKNSDGKISKEEFL 72
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
+ N D + +G I+F EF+ ++ + T +E+L+ AF+++D D +G+I+ E+ ++
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGT-LDEKLRWAFKLYDLDNDGYITRNEMLDIVD 126
Query: 112 NLGE------KLTDEE------VDEMIREADVDGDGQINYEEF 142
+ + +L +EE VD + D + DG++ +EF
Sbjct: 127 AIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 45 TEAELQDMINEVDAD-GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISA 103
TE E+Q D +G +D F + + D + F VFD++++G I
Sbjct: 23 TEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEF 82
Query: 104 AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
+E ++ DE++ + D+D DG I E + ++
Sbjct: 83 SEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV 125
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 22/157 (14%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKEL-----GTVMRSLGQNPTEAELQDMINEVDADGNGT 63
I K F+ D + +G I+ E+ V+ +LG P +A+ E G G
Sbjct: 14 WIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGM 73
Query: 64 -----IDFPEFLNLMARKMKDTDSEEELKE-----------AFRVFDKDQNGFISAAELR 107
D+P ++ +K+ + E+ K F + DKDQNG I+ E +
Sbjct: 74 KYGVETDWPAYIEGW-KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWK 132
Query: 108 HVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
G + E+ +E R D+D GQ++ +E +
Sbjct: 133 AYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEVDADGNGT 63
I K F D +G+G IT E+ + + ++LG P + + E G G
Sbjct: 18 WIKRHKFMFDYLDINGNGQITLDEIVSKASDDICKNLGATPAQTQRHQDCVEAFFRGCGL 77
Query: 64 -----IDFPEFL----NL----MARKMKDTDS--EEELKEAFRVFDKDQNGFISAAELRH 108
FPEFL NL +A+ ++ + E F +FDKD +G I+ E +
Sbjct: 78 EYGKETKFPEFLEGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
G ++E+ ++ + D+D G+++ +E + +
Sbjct: 138 YGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTRQHLG 177
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 22/161 (13%)
Query: 9 QISEFKEAFSLFDKDGDGCIT-----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
I K F+ D + +G I+ K V+ +LG P +A+ E G G
Sbjct: 14 WIGRHKHXFNFLDVNHNGKISLDEXVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGX 73
Query: 64 -----IDFPEFLNLMARKMKDTDSEEELKE-----------AFRVFDKDQNGFISAAELR 107
D+P ++ +K+ + E+ K F + DKDQNG I+ E +
Sbjct: 74 KYGVETDWPAYIEGW-KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWK 132
Query: 108 HVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
G + E+ +E R D+D GQ++ +E + +
Sbjct: 133 AYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEXTRQHLG 173
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 20/160 (12%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEVDADGNGT 63
I K F D +G+G IT E+ + + L P + + + E G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 -----IDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAAELRH 108
I FP+FL+ L ++K E ++E F +FDKD +G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
G + E+ + R D+D G ++ +E + +
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLG 177
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEVDADGNGT 63
I K F D +G+G IT E+ + + L P + + + E G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 -----IDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAAELRH 108
I FP+FL+ L ++K E ++E F +FDKD +G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
G + E+ + R D+D G ++ +E +
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR 173
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 20/160 (12%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEVDADGNGT 63
I K F D +G+G IT E+ + + L P + + + E G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 -----IDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAAELRH 108
I FP+FL+ L ++K E ++E F +FDKD +G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
G + E+ + R D+D G ++ +E + +
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLG 177
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEVDADGNGT 63
I K F D +G+G IT E+ + + L P + + + E G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 -----IDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAAELRH 108
I FP+FL+ L ++K E ++E F +FDKD +G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
G + E+ + R D+D G ++ +E +
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTR 173
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 20/160 (12%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGT-----VMRSLGQNPTEAELQDMINEVDADGNGT 63
I K F D +G+G IT E+ + + L P + + + E G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 -----IDFPEFLN----LMARKMKDTDSEEE--LKE----AFRVFDKDQNGFISAAELRH 108
I FP+FL+ L ++K E ++E F +FDKD +G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
G + E+ + R D+D G ++ +E + +
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTRQHLG 177
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 26 GCITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEE 84
G IT ++ ++ + +A Q + D++ +GT+DF E++ + + +
Sbjct: 49 GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYV-IALHXTTAGKTNQ 107
Query: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
+L+ AF ++D D NG IS E+ ++ + + +T E+V
Sbjct: 108 KLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDV 145
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%)
Query: 62 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121
G I +F ++ A+ DTD + + FR FD + +G + E + T+++
Sbjct: 49 GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQK 108
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
++ DVDG+G I+ E ++++ A
Sbjct: 109 LEWAFSLYDVDGNGTISKNEVLEIVXA 135
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
+ F FD + DG + KE + T +L+ + D DGNGTI E L ++
Sbjct: 74 QHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 133
Query: 74 ARKMKDTDSE 83
K E
Sbjct: 134 XAIFKXITPE 143
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 25 DGCITTKELGTVMRSLGQNPTEAEL-----QDMINEVDADGNGTIDFPEFLNLMARKMKD 79
DG + +EL + G N T + + MI +D D G + F F L A
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA----- 67
Query: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
+ KE F D+D +G + ELR + +G +L+ + + +++ +G+I +
Sbjct: 68 --ALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR--YSKNGRIFF 123
Query: 140 EEFVKVMM 147
+++V +
Sbjct: 124 DDYVACCV 131
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
++ +KE F D+DG G + EL + +G + L ++ NG I F ++
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDY 126
Query: 70 LNLMARKMKDTD 81
+ + TD
Sbjct: 127 VACCVKLRALTD 138
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 25 DGCITTKELGTVMRSLGQNPTEAEL-----QDMINEVDADGNGTIDFPEFLNLMARKMKD 79
DG + +EL + G N T + + MI +D D G + F F L A
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA----- 67
Query: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
+ KE F D+D +G + ELR + +G +L+ + + +++ +G+I +
Sbjct: 68 --ALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR--YSKNGRIFF 123
Query: 140 EEFVKVMM 147
+++V +
Sbjct: 124 DDYVACCV 131
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
++ +KE F D+DG G + EL + +G + L ++ NG I F ++
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDY 126
Query: 70 LNLMARKMKDTD 81
+ + TD
Sbjct: 127 VACCVKLRALTD 138
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 72 LMARKMKDTDSE-EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
++AR K S + + F FD + IS E R + + LTDE+ D + E
Sbjct: 11 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 70
Query: 131 VDGDGQINYEEFV 143
V+ G++ Y +F+
Sbjct: 71 VNAKGRLKYPDFL 83
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
SEEEL AFR+FDK+ +G+I EL ++ G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLG 41
E AF +FDK+ DG I +ELG ++R+ G
Sbjct: 6 ELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
KE + FD + G I L+ +M LG T E+ +MI E I+Y +FV +
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 146 MMAK 149
M+ K
Sbjct: 112 MLGK 115
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
F D +GDG ++ +E+ + E LQ + +DADGNG ID EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 99
+ E+D +G+G + + E +++K + +E+ L+ F+ D D NG
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNG 51
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 125 MIREADVDGDGQINYEEFVKVMMAK 149
+ +E DV+GDG ++YEE VK ++K
Sbjct: 5 LFKEIDVNGDGAVSYEE-VKAFVSK 28
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
KE + FD + G I L+ +M LG T E+ +MI E I+Y +FV +
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 146 MMAK 149
M+ K
Sbjct: 112 MLGK 115
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 83 EEELKEAFRVFDKDQNGFISAAEL------------RHVMTNLGEKLTDEEVDEMIREAD 130
E+LK AF ++D +++G+I+ E+ RH L E E V+ + D
Sbjct: 8 HEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMD 67
Query: 131 VDGDGQINYEEFV 143
+ DG + EEF+
Sbjct: 68 RNQDGVVTIEEFL 80
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 14/72 (19%)
Query: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSL----GQN---------PTEAELQDMINEVDA 58
+ K AF+L+D + DG IT +E+ +M+S+ G++ P E ++ ++D
Sbjct: 10 KLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAE-HVERFFEKMDR 68
Query: 59 DGNGTIDFPEFL 70
+ +G + EFL
Sbjct: 69 NQDGVVTIEEFL 80
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 34.3 bits (77), Expect = 0.027, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
M++ +D DG+G + EF L + K ++ +R D D++G +++ E+R +
Sbjct: 580 MVDMLDEDGSGKLGLKEFYILWTKIQK-------YQKIYREIDVDRSGTMNSYEMRKALE 632
Query: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
G KL ++ ++I D + I+++ FV+ ++
Sbjct: 633 EAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLV 667
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 34.3 bits (77), Expect = 0.027, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
M++ +D DG+G + EF L + K ++ +R D D++G +++ E+R +
Sbjct: 580 MVDMLDEDGSGKLGLKEFYILWTKIQK-------YQKIYREIDVDRSGTMNSYEMRKALE 632
Query: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
G KL ++ ++I D + I+++ FV+ ++
Sbjct: 633 EAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLV 667
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 34.3 bits (77), Expect = 0.027, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
M++ +D DG+G + EF L + K ++ +R D D++G +++ E+R +
Sbjct: 580 MVDMLDEDGSGKLGLKEFYILWTKIQK-------YQKIYREIDVDRSGTMNSYEMRKALE 632
Query: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
G KL ++ ++I D + I+++ FV+ ++
Sbjct: 633 EAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLV 667
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 21 DKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
DK+ DG I E + +LG ++AE + N+VD +GNG + E L
Sbjct: 112 DKNADGQINADEFAAWLTALGM--SKAEAAEAFNQVDTNGNGELSLDELL 159
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 15/79 (18%)
Query: 82 SEEELKEAFRVFDKDQNGFISAA----ELRHVMTNLGEKLTDEEV-----------DEMI 126
+ + LK+ F +D D NG + A E +H+ G+ EV D +
Sbjct: 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLA 64
Query: 127 READVDGDGQINYEEFVKV 145
+EA V DG + E+F++V
Sbjct: 65 KEAGVGSDGSLTEEQFIRV 83
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
+ D D++G++S E + + +G LTD++ D + +GQI+ +EF+
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
+ D D DG ++ E ++++G + T+ + N +D + NG I EFL
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
+ D D++G++S E + + +G LTD++ D + +GQI+ +EF+
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
+ D D DG ++ E ++++G + T+ + N +D + NG I EFL
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 52 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
M++ +D+DG+G + EF L + K ++ +R D D++G +++ E+R +
Sbjct: 579 MVDMLDSDGSGKLGLKEFYILWTKIQK-------YQKIYREIDVDRSGTMNSYEMRKALE 631
Query: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
G K+ ++ ++I D I+++ FV+ ++
Sbjct: 632 EAGFKMPC-QLHQVIVARFADDQLIIDFDNFVRCLV 666
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
+DD+I K + L D DGDG +T +E+ + + G ++ + + + DA+G+G I
Sbjct: 1 SDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYIT 55
Query: 66 FPEFL 70
EFL
Sbjct: 56 LEEFL 60
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
LK +++ D D +G ++ E+ T+ +K E+V E + +AD +GDG I EEF+
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKADANGDGYITLEEFL 60
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 79 DTDSEE--ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136
D D EE L+ F D +++G + E R + T L + D E + + D D DG
Sbjct: 20 DGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDGA 77
Query: 137 INYEEFVKVMM 147
I ++EF + +
Sbjct: 78 ITFQEFARGFL 88
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
++++ + F+ D + G + +E + L P +AE + +DAD +G I F
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDGAITFQ 81
Query: 68 EF 69
EF
Sbjct: 82 EF 83
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
S + ++ F DK +G ++ + R ++ + L ++ + +D+D DG++ E
Sbjct: 11 SSRLKYRQLFNSHDKTMSGHLTGPQARTIL--MQSSLPQAQLASIWNLSDIDQDGKLTAE 68
Query: 141 EFVKVM 146
EF+ M
Sbjct: 69 EFILAM 74
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 53 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 112
I ++ T FP LN + D + + F D+D++G + EL
Sbjct: 26 IYQMPPSVRNTWWFP-LLNTI-----PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFP 79
Query: 113 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
G +L+ + M+R D D +G I++ EF+ +
Sbjct: 80 GGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 53 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 112
I ++ T FP LN + D + + F D+D++G + EL
Sbjct: 26 IYQMPPSVRNTWWFP-LLNTI-----PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFP 79
Query: 113 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
G +L+ + M+R D D +G I++ EF+ +
Sbjct: 80 GGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 82 SEEELK-EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE------------VDEMIRE 128
S +EL+ F++ D D N + EL +T++ ++ E+ +D ++R+
Sbjct: 15 SPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRD 74
Query: 129 ADVDGDGQINYEEFVKVM 146
D + DG I+Y EF K +
Sbjct: 75 DDKNNDGYIDYAEFAKSL 92
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 82 SEEELK-EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE------------VDEMIRE 128
S +EL+ F++ D D N + EL +T++ ++ E+ +D ++R+
Sbjct: 46 SPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRD 105
Query: 129 ADVDGDGQINYEEFVKVM 146
D + DG I+Y EF K +
Sbjct: 106 DDKNNDGYIDYAEFAKSL 123
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 28/30 (93%)
Query: 117 LTDEEVDEMIREADVDGDGQINYEEFVKVM 146
+T+E+++++++++D + DG+I+++EF+K+M
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 45 TEAELQDMINEVDADGNGTIDFPEFLNLM 73
TE +++D++ + D + +G IDF EFL +M
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 82 SEEELK-EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE------------VDEMIRE 128
S +EL+ F++ D D N + EL +T++ ++ E+ +D ++R+
Sbjct: 65 SPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRD 124
Query: 129 ADVDGDGQINYEEFVKVM 146
D + DG I+Y EF K +
Sbjct: 125 DDKNNDGYIDYAEFAKSL 142
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 23/27 (85%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VD++++E D DGDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDEDGDGEVDFQEYVVLVAA 80
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 52 MINEVDADGNGTIDFPEFLNLMA 74
++ E+D DG+G +DF E++ L+A
Sbjct: 57 VMKELDEDGDGEVDFQEYVVLVA 79
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 23/27 (85%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VD++++E D +GDG+++++EFV ++ A
Sbjct: 54 VDKIMKELDENGDGEVDFQEFVVLVAA 80
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 52 MINEVDADGNGTIDFPEFLNLMA 74
++ E+D +G+G +DF EF+ L+A
Sbjct: 57 IMKELDENGDGEVDFQEFVVLVA 79
>pdb|1BJA|A Chain A, Activation Domain Of The Phage T4 Transcription Factor
Mota
pdb|1BJA|B Chain B, Activation Domain Of The Phage T4 Transcription Factor
Mota
Length = 95
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 100 FISAAELRHVMTNLGEKLTDEEVDEMIREADVD--GDGQI 137
FI+AAE+R V +LG + + + +I++ V+ GDG I
Sbjct: 30 FITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLI 69
>pdb|1I1S|A Chain A, Solution Structure Of The Transcriptional Activation
Domain Of The Bacteriophage T4 Protein Mota
Length = 96
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 100 FISAAELRHVMTNLGEKLTDEEVDEMIREADVD--GDGQI 137
FI+AAE+R V +LG + + + +I++ V+ GDG I
Sbjct: 31 FITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLI 70
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 21/25 (84%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
+D M+++ D+D DGQ++++EF+ ++
Sbjct: 58 LDRMMKKLDLDSDGQLDFQEFLNLI 82
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 33 LGTVMRSLGQNPTEAELQD-MINEVDADGNGTIDFPEFLNLMA 74
+ T + + QN + + D M+ ++D D +G +DF EFLNL+
Sbjct: 41 MNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIG 83
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 82 SEEELKEAFRVFDKDQNG--------FISAAELRHVMTNLGEKLTDEEVDEMIREADVDG 133
S EELK F +DK+ +G + E ++ + +DE+ E D +G
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDKNG 56
Query: 134 DGQINYEEFVKVMMAK 149
DG++++EEF +V++ K
Sbjct: 57 DGEVSFEEF-QVLVKK 71
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 14/72 (19%)
Query: 12 EFKEAFSLFDKDGDG--------CITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
E K F +DK+GDG + E ++++ + + L ++ E+D +G+G
Sbjct: 6 ELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGM------STLDELFEELDKNGDGE 59
Query: 64 IDFPEFLNLMAR 75
+ F EF L+ +
Sbjct: 60 VSFEEFQVLVKK 71
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
NGF+S +++ V+ N KL + + + +D+D DG ++ +EF M
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
NGF+S +++ V+ N KL + + + +D+D DG ++ +EF M
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
NGF+S +++ V+ N KL + + + +D+D DG ++ +EF M
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
NGF+S +++ V+ N KL + + + +D+D DG ++ +EF M
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VD++++E D +GDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 43 NPTEAELQDMI----NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
N T+ ELQ + NE + G ++ F + A+ D+ F FD Q
Sbjct: 11 NFTKRELQVLYRGFKNECPS---GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQT 67
Query: 99 GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
G + + ++ L E++ D++ DG IN EE + ++ A
Sbjct: 68 GSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VD++++E D +GDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VD++++E D +GDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 43 NPTEAELQDMI----NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
N T+ ELQ + NE + G ++ F + A+ D+ F FD Q
Sbjct: 11 NFTKRELQVLYRGFKNECPS---GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQT 67
Query: 99 GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
G + + ++ L E++ D++ DG IN EE + ++ A
Sbjct: 68 GSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VD++++E D +GDG+++++E+V ++ A
Sbjct: 54 VDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 43 NPTEAELQDMINEVDAD-GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101
N T+ ELQ + + +G ++ F + A+ D+ F FD Q G +
Sbjct: 47 NFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSV 106
Query: 102 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
+ ++ L E++ D++ DG IN EE + ++ A
Sbjct: 107 KFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VD++++E D +GDG+++++E+V ++ A
Sbjct: 55 VDKVMKELDENGDGEVDFQEYVVLVAA 81
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 101 ISAAELRHVM---TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
+S EL+ ++ +G KL D E+ ++ + D + D ++N++E+V + A
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 79
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEF-QVLVKK 72
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEF-QVLVKK 72
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 15 EAFSLFDKDGDGCITT------KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
E F + +K G+G + KE G ++ ++ Q P E++LQ++I E+ D P
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIV-AIKQVPVESDLQEIIKEISIMQQ--CDSPH 85
Query: 69 FLNLMARKMKDTD 81
+ K+TD
Sbjct: 86 VVKYYGSYFKNTD 98
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 43 NPTEAELQDMINEV-DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101
N T+ ELQ + + +G ++ F + A+ D+ F FD Q G +
Sbjct: 14 NFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSV 73
Query: 102 SAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
+ ++ L E++ D++ DG IN EE + ++ A
Sbjct: 74 KFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEF-QVLVKK 73
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 21/25 (84%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVM 146
+D M+++ D++ DGQ++++EF+ ++
Sbjct: 56 LDRMMKKLDLNSDGQLDFQEFLNLI 80
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 49 LQDMINEVDADGNGTIDFPEFLNLM 73
L M+ ++D + +G +DF EFLNL+
Sbjct: 56 LDRMMKKLDLNSDGQLDFQEFLNLI 80
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEF-QVLVKK 72
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEF-QVLVKK 73
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 50 LDELFEELDKNGDGEVSFEEF-QVLVKK 76
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKNGDGEVSFEEF-QVLVKK 72
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEF-QVLVKK 73
>pdb|4GXT|A Chain A, The Crystal Structure Of A Conserved Functionally Unknown
Protein From Anaerococcus Prevotii Dsm 20548
Length = 385
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAE---LRHVMTNLGEKLTDEEVDEMIRE 128
L+A+ KD ++ + F VFD D I E L + + N+ K EE E+IR+
Sbjct: 24 LIAKHGKDNEAYNPDNKPFAVFDWDNTSIIGDVEEALLYYXVRNVSFKXDPEEFYELIRK 83
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
Length = 95
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 20/27 (74%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VD+++++ D +GD Q+++ EF+ + A
Sbjct: 54 VDKLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D +GDG++++EEF +V++ K
Sbjct: 47 LDELFEELDKNGDGEVSFEEF-QVLVKK 73
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p Determined
At 2.0a Resolution By X-Ray
Length = 95
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 20/27 (74%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMA 148
VD+++++ D +GD Q+++ EF+ + A
Sbjct: 54 VDKLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Query: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 72
K+ F + + D G ++ L V L A L ++D + NGT+ EF
Sbjct: 160 LKKLFVMVENDTKGRMSYITLVAVANDL------AALVADFRKIDTNSNGTLSRKEFREH 213
Query: 73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132
R D S ++ FR D+D++ + +E H LG L + + AD D
Sbjct: 214 FVRLGFDKKSVQD--ALFRYADEDESDDVGFSEYVH----LGLCLLVLRI--LYAFADFD 265
Query: 133 GDGQINYEEFVKVM 146
GQ++ EE KV+
Sbjct: 266 KSGQLSKEEVQKVL 279
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 39 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 74
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 101 ISAAELRHVM---TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
+S EL+ ++ +G KL D E+ + + D + D ++N++E+V + A
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYVTFLGA 79
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+D++ +E D +GDG++++EEF +V++ K
Sbjct: 49 LDDLFQELDKNGDGEVSFEEF-QVLVKK 75
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To Sbi4211
Length = 89
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 75
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 75
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase
Length = 91
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 39 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 74
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 46 EAELQDMINE-VDADGNGTIDFPEFLNLMA 74
E E+ D + E +D+DG+G DF EF+ +A
Sbjct: 49 EQEVVDKVMETLDSDGDGECDFQEFMAFVA 78
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDSDGDGECDFQEFM 75
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 122 VDEMIREADVDGDGQINYEEFVKVMMAK 149
+DE+ E D GDG++++EEF +V++ K
Sbjct: 46 LDELFEELDKAGDGEVSFEEF-QVLVKK 72
>pdb|1E8A|A Chain A, The Three-Dimensional Structure Of Human S100a12
pdb|1E8A|B Chain B, The Three-Dimensional Structure Of Human S100a12
pdb|1GQM|A Chain A, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|B Chain B, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|C Chain C, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|D Chain D, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|E Chain E, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|F Chain F, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|G Chain G, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|H Chain H, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|I Chain I, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|J Chain J, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|K Chain K, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|L Chain L, The Structure Of S100a12 In A Hexameric Form
Length = 91
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 28 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 78
+ TKEL ++++ +A + ++ +DA+ + +DF EF++L+A +K
Sbjct: 35 LLTKELANTIKNI---KDKAVIDEIFQGLDANQDEQVDFQEFISLVAIALK 82
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 101 ISAAELRHVM---TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
+S EL+ ++ +G KL D E+ +++ + D + D ++N++E++ + A
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYITFLGA 79
>pdb|1MYW|A Chain A, Crystal Structure Of A Yellow Fluorescent Protein With
Improved Maturation And Reduced Environmental
Sensitivity
Length = 237
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 41 GQNPTEAELQ----DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKD 96
G T AE++ ++N ++ G IDF E N++ K++ + + + DK
Sbjct: 103 GNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNYNSHNV---YITADKQ 156
Query: 97 QNGFISAAELRHVMTNLGEKLTDE 120
+NG + ++RH + + G +L D
Sbjct: 157 KNGIKANFKIRHNIEDGGVQLADH 180
>pdb|1ODB|A Chain A, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|B Chain B, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|C Chain C, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|D Chain D, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|E Chain E, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|F Chain F, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|2WC8|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|C Chain C, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|D Chain D, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCF|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCF|B Chain B, Calcium-Free (Apo) S100a12
pdb|2WCF|C Chain C, Calcium-Free (Apo) S100a12
pdb|2WCF|D Chain D, Calcium-Free (Apo) S100a12
pdb|2WCF|E Chain E, Calcium-Free (Apo) S100a12
pdb|2WCF|F Chain F, Calcium-Free (Apo) S100a12
Length = 95
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Q S K F K + TKEL ++++ +A + ++ +DA+ + +DF E
Sbjct: 20 QYSVRKGHFDTLSKGELKQLLTKELANTIKNI---KDKAVIDEIFQGLDANQDEQVDFQE 76
Query: 69 FLNLMARKMK 78
F++L+A +K
Sbjct: 77 FISLVAIALK 86
>pdb|1SP9|A Chain A, 4-hydroxyphenylpyruvate Dioxygenase
pdb|1SP9|B Chain B, 4-hydroxyphenylpyruvate Dioxygenase
Length = 445
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPT 45
+ D L+DDQI E +E L D+D G + L + LG PT
Sbjct: 350 VGDVLSDDQIKECEELGILVDRDDQGTL----LQIFTKPLGDRPT 390
>pdb|1SQD|A Chain A, Structural Basis For Inhibitor Selectivity Revealed By
Crystal Structures Of Plant And Mammalian 4-
Hydroxyphenylpyruvate Dioxygenases
pdb|1TFZ|A Chain A, Structural Basis For Herbicidal Inhibitor Selectivity
Revealed By Comparison Of Crystal Structures Of Plant
And Mammalian 4- Hydroxyphenylpyruvate Dioxygenases
pdb|1TG5|A Chain A, Crystal Structures Of Plant 4-Hydroxyphenylpyruvate
Dioxygenases Complexed With Das645
Length = 424
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPT 45
+ D L+DDQI E +E L D+D G + L + LG PT
Sbjct: 329 VGDVLSDDQIKECEELGILVDRDDQGTL----LQIFTKPLGDRPT 369
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSL---GQNPTEAELQDMINEVDADGNGTIDF 66
I E F DKDG + +E + L G + T+A + NE+D +G+G + F
Sbjct: 132 IFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDA--TTVFNEIDTNGSGVVTF 189
Query: 67 PEFLNLMARK----MKDTDSEE 84
EF K D D EE
Sbjct: 190 DEFSCWAVTKKLQVCGDPDGEE 211
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 88 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142
E F DKD +GF+S E+R + G L + + D G+++ ++F
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQF 66
>pdb|2KZX|A Chain A, Solution Nmr Structure Of A3dht5 From Clostridium
Thermocellum, Northeast Structural Genomics Consortium
Target Cmr116
Length = 131
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 42 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEE 84
Q+PT+ + +D DA TI +F +L + +KD + E
Sbjct: 83 QDPTDIKYKDNDGHTDAISGATIKVKKFFDLAQKALKDAEKLE 125
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDNDGDGECDFQEFM 75
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDEDGDGECDFQEFM 75
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA-DVDGDGQ-INYE 140
++E + F +FD++ ++ ++T LG+ T E + +++EA GD + I E
Sbjct: 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE 72
Query: 141 EFV 143
E++
Sbjct: 73 EWL 75
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 39 ELSHFLEEIKEQ---EVVDKVMETLDEDGDGECDFQEFM 74
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 39 ELSHFLEEIKEQ---EVVDKVMETLDNDGDGECDFQEFM 74
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
Length = 92
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
EL H + + E+ E VD+++ D DGDG+ +++EF+
Sbjct: 40 ELSHFLEEIKEQ---EVVDKVMETLDNDGDGECDFQEFM 75
>pdb|3M0W|A Chain A, Structure Of S100a4 With Pcp
pdb|3M0W|B Chain B, Structure Of S100a4 With Pcp
pdb|3M0W|C Chain C, Structure Of S100a4 With Pcp
pdb|3M0W|D Chain D, Structure Of S100a4 With Pcp
pdb|3M0W|E Chain E, Structure Of S100a4 With Pcp
pdb|3M0W|F Chain F, Structure Of S100a4 With Pcp
pdb|3M0W|G Chain G, Structure Of S100a4 With Pcp
pdb|3M0W|H Chain H, Structure Of S100a4 With Pcp
pdb|3M0W|I Chain I, Structure Of S100a4 With Pcp
pdb|3M0W|J Chain J, Structure Of S100a4 With Pcp
Length = 100
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 28 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 74
+ T+EL + LG+ EA Q +++ +D++ + +DF E+ ++
Sbjct: 36 LLTRELPSF---LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS 79
>pdb|1M31|A Chain A, Three-Dimensional Solution Structure Of Apo-Mts1
pdb|1M31|B Chain B, Three-Dimensional Solution Structure Of Apo-Mts1
pdb|2Q91|A Chain A, Structure Of The Ca2+-Bound Activated Form Of The S100a4
Metastasis Factor
pdb|2Q91|B Chain B, Structure Of The Ca2+-Bound Activated Form Of The S100a4
Metastasis Factor
pdb|3CGA|A Chain A, Crystal Structure Of Metastasis-Associated Protein
S100a4 In The Active, Calcium-Bound Form
pdb|3CGA|B Chain B, Crystal Structure Of Metastasis-Associated Protein
S100a4 In The Active, Calcium-Bound Form
pdb|3KO0|A Chain A, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|B Chain B, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|C Chain C, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|D Chain D, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|E Chain E, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|F Chain F, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|G Chain G, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|H Chain H, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|I Chain I, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|J Chain J, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|K Chain K, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|L Chain L, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|M Chain M, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|N Chain N, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|O Chain O, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|P Chain P, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|Q Chain Q, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|R Chain R, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|S Chain S, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|T Chain T, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
Length = 101
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 28 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 74
+ T+EL + LG+ EA Q +++ +D++ + +DF E+ ++
Sbjct: 37 LLTRELPSF---LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS 80
>pdb|4ETO|A Chain A, Structure Of S100a4 In Complex With Non-Muscle
Myosin-Iia Peptide
pdb|4ETO|B Chain B, Structure Of S100a4 In Complex With Non-Muscle
Myosin-Iia Peptide
pdb|4HSZ|A Chain A, Structure Of Truncated (delta8c) S100a4
pdb|4HSZ|B Chain B, Structure Of Truncated (delta8c) S100a4
pdb|4HSZ|C Chain C, Structure Of Truncated (delta8c) S100a4
pdb|4HSZ|D Chain D, Structure Of Truncated (delta8c) S100a4
Length = 93
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 28 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 74
+ T+EL + LG+ EA Q +++ +D++ + +DF E+ ++
Sbjct: 37 LLTRELPSF---LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS 80
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 75
A + D DGDG +T + + + G P + Q +D DG+G + E + AR
Sbjct: 103 ALGVADTDGDGAVTVADTARALTAFGV-PEDLARQ-AAAALDTDGDGKVGETEIVPAFAR 160
>pdb|4F52|A Chain A, Structure Of A Glomulin-Rbx1-Cul1 Complex
pdb|4F52|C Chain C, Structure Of A Glomulin-Rbx1-Cul1 Complex
Length = 282
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 35 TVMRSLGQNPTEAELQDMINEV 56
++++ +NP EAEL+D +N+V
Sbjct: 20 SLLKKSSKNPEEAELEDTLNQV 41
>pdb|3LA1|A Chain A, High Resolution Crystal Structure Of Cypet Mutant A167i
Length = 237
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 41 GQNPTEAELQ----DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKD 96
G T AE++ ++N ++ G IDF E N++ K++ + + DK
Sbjct: 103 GNYKTRAEVKFEGDTLVNRIELKG---IDFKEDGNILGHKLEYNYISHNV---YITADKQ 156
Query: 97 QNGFISAAELRHVMTNLGEKLTDE 120
+NG + ++RH +T+ +L D
Sbjct: 157 KNGIKANFKIRHNITDGSVQLADH 180
>pdb|3RTR|A Chain A, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|C Chain C, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|E Chain E, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|G Chain G, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
Length = 368
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 35 TVMRSLGQNPTEAELQDMINEV 56
++++ +NP EAEL+D +N+V
Sbjct: 20 SLLKKSSKNPEEAELEDTLNQV 41
>pdb|3C1V|A Chain A, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|3C1V|B Chain B, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|3C1V|C Chain C, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|3C1V|D Chain D, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|2LNK|A Chain A, Solution Structure Of Ca-Bound S100a4 In Complex With
Non-Muscle Myosin Iia
pdb|2LNK|B Chain B, Solution Structure Of Ca-Bound S100a4 In Complex With
Non-Muscle Myosin Iia
Length = 113
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 28 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 74
+ T+EL + LG+ EA Q +++ +D++ + +DF E+ ++
Sbjct: 49 LLTRELPSF---LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS 92
>pdb|1LDJ|A Chain A, Structure Of The Cul1-rbx1-skp1-f Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 760
Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 35 TVMRSLGQNPTEAELQDMINEV 56
++++ +NP EAEL+D +N+V
Sbjct: 412 SLLKKSSKNPEEAELEDTLNQV 433
>pdb|1LDK|B Chain B, Structure Of The Cul1-Rbx1-Skp1-F Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 366
Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 35 TVMRSLGQNPTEAELQDMINEV 56
++++ +NP EAEL+D +N+V
Sbjct: 18 SLLKKSSKNPEEAELEDTLNQV 39
>pdb|1JX4|A Chain A, Crystal Structure Of A Y-Family Dna Polymerase In A
Ternary Complex With Dna Substrates And An Incoming
Nucleotide
Length = 352
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 119 DEEVDEMIRE---ADVDGDGQINYEEFVKVMMAK 149
DEEV +IRE ADV G G I E+ K+ + K
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKLGINK 201
>pdb|3V6K|A Chain A, Replication Of N2,3-Ethenoguanine By Dna Polymerases
pdb|3V6K|J Chain J, Replication Of N2,3-Ethenoguanine By Dna Polymerases
Length = 347
Score = 25.8 bits (55), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 119 DEEVDEMIRE---ADVDGDGQINYEEFVKVMMAK 149
DEEV +IRE ADV G G I E+ K+ + K
Sbjct: 173 DEEVKRLIRELDIADVPGIGNITAEKLKKLGINK 206
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.133 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,514,464
Number of Sequences: 62578
Number of extensions: 188998
Number of successful extensions: 2011
Number of sequences better than 100.0: 431
Number of HSP's better than 100.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 491
Number of HSP's gapped (non-prelim): 834
length of query: 149
length of database: 14,973,337
effective HSP length: 90
effective length of query: 59
effective length of database: 9,341,317
effective search space: 551137703
effective search space used: 551137703
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.7 bits)