BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032008
(149 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 191 bits (485), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/149 (64%), Positives = 126/149 (84%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LT+DQI+EF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFL +M RKMK+ SEE LKEAF+VFD+DQ+GFISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG +++EEF ++MMA
Sbjct: 120 EEVDEMIREADVDGDGQINYEEFVKVMMA 148
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 191 bits (485), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/149 (64%), Positives = 126/149 (84%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTEDQI+EF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFL +M RKMK+ SEE LKEAF+VFD+DQ+GFISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG ++++EF ++MMA
Sbjct: 120 EEVDEMIREADVDGDGQINYDEFVKVMMA 148
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 191 bits (484), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 129/148 (87%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD L+E+QI +F+EAF + DKD DG IT+++LATVI+S D++P +EE+Q+MISEVD DG
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+I+F EFL++M +K+K+ + EELKEAFKVFD+DQ+G+ISA+ELR+VM+NLGE+L+DE
Sbjct: 60 NGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E EQMI+EADLDGDG V++EEF +MMM
Sbjct: 120 EVEQMIKEADLDGDGQVNYEEFVKMMMT 147
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 189 bits (481), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/149 (64%), Positives = 125/149 (83%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE +QMIREAD+DGDG V++EEF +MM A
Sbjct: 120 EEVDQMIREADIDGDGQVNYEEFVQMMTA 148
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV +MI E D DG+G +++ EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDQMIREADIDGDGQVNYEEFV 143
Query: 72 TIMGRK 77
+M K
Sbjct: 144 QMMTAK 149
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 188 bits (478), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 125/149 (83%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 62
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+D
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 122
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG V++EEF +MM A
Sbjct: 123 EEVDEMIREADIDGDGQVNYEEFVQMMTA 151
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 88 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 146
Query: 72 TIMGRK 77
+M K
Sbjct: 147 QMMTAK 152
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 188 bits (478), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 125/149 (83%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG V++EEF +MM A
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 72 TIMGRK 77
+M K
Sbjct: 144 QMMTAK 149
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 125/149 (83%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG V++EEF +MM A
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 125/149 (83%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG V++EEF +MM A
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 72 TIMGRK 77
+M K
Sbjct: 144 QMMTAK 149
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 125/149 (83%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 60
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+D
Sbjct: 61 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 120
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG V++EEF +MM A
Sbjct: 121 EEVDEMIREADIDGDGQVNYEEFVQMMTA 149
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 86 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 144
Query: 72 TIMGRK 77
+M K
Sbjct: 145 QMMTAK 150
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 125/149 (83%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG V++EEF +MM A
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 72 TIMGRKM 78
+M K+
Sbjct: 144 QMMTAKL 150
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 187 bits (474), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 124/149 (83%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +GFISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG V++EEF MM +
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVTMMTS 148
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 72 TIMGRK 77
T+M K
Sbjct: 144 TMMTSK 149
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 186 bits (473), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +GFISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
EE ++MIREAD+DGDG V++EEF MM
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 72 TIMGRK 77
T+M K
Sbjct: 144 TMMTTK 149
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 65
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DE
Sbjct: 66 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 125
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF +MM A
Sbjct: 126 EVDEMIREADIDGDGQVNYEEFVQMMTA 153
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 90 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 148
Query: 72 TIMGRK 77
+M K
Sbjct: 149 QMMTAK 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DE
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF +MM A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 72 TIMGRK 77
+M K
Sbjct: 143 QMMTAK 148
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGN 362
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 363 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 422
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 423 VDEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N ++L KEAF +FD+D DG I+
Sbjct: 276 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 332
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
EL VM +LG+ ++ E + MI E D DG+G + F EF MM
Sbjct: 333 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 374
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 386 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 444
Query: 72 TIMGRK 77
+M K
Sbjct: 445 QMMTAK 450
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGN 324
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 325 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 384
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 385 VDEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N ++L KEAF +FD+D DG I+
Sbjct: 238 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 294
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
EL VM +LG+ ++ E + MI E D DG+G + F EF MM
Sbjct: 295 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 336
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGN 327
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 328 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 387
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 388 VDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 409
Query: 72 TIMGRK 77
+M K
Sbjct: 410 QMMTAK 415
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DE
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF +MM A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGN 361
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 362 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N ++L KEAF +FD+D DG I+
Sbjct: 275 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 331
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
EL VM +LG+ ++ E + MI E D DG+G + F EF MM
Sbjct: 332 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 72 TIMGRK 77
+M K
Sbjct: 444 QMMTAK 449
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 186 bits (472), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 123/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +GFISAAELR+VM NLGE+L+DE
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF MM A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVTMMTA 147
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 72 TIMGRK 77
T+M K
Sbjct: 143 TMMTAK 148
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 186 bits (472), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGN 327
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 328 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 387
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 388 VDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 409
Query: 72 TIMGRK 77
+M K
Sbjct: 410 QMMTAK 415
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 186 bits (472), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LT++QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFL +M RKMK+ SEE LKEAF+VFD+D +GFISAAELR+VM NLGE+L+DE
Sbjct: 60 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF ++MMA
Sbjct: 120 EVDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 186 bits (472), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LT++QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFL +M RKMK+ SEE LKEAF+VFD+D +GFISAAELR+VM NLGE+L+DE
Sbjct: 60 NGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF ++MMA
Sbjct: 120 EVDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 186 bits (472), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGN 361
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 362 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N ++L KEAF +FD+D DG I+
Sbjct: 275 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 331
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
EL VM +LG+ ++ E + MI E D DG+G + F EF MM
Sbjct: 332 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 72 TIMGRK 77
+M K
Sbjct: 444 QMMTAK 449
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 186 bits (471), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 124/149 (83%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MAD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDAD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GNG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +GFISAAELR+VM NLGE+L+D
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIRE+D+DGDG V++EEF MM +
Sbjct: 120 EEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMIRESDIDGDGQVNYEEFV 143
Query: 72 TIMGRK 77
T+M K
Sbjct: 144 TMMTSK 149
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 185 bits (470), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 122/147 (82%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGN 361
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 362 GTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N ++L KEAF +FD+D DG I+
Sbjct: 275 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 331
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
EL VM +LG+ ++ E + MI E D DG+G + F EF MM
Sbjct: 332 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 72 TIMGRK 77
+M K
Sbjct: 444 QMMTAK 449
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 185 bits (469), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 123/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +GFISAAELR+VM NLGE+L+DE
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF MM +
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVTMMTS 147
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 72 TIMGRK 77
T+M K
Sbjct: 143 TMMTSK 148
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 185 bits (469), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DE
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREA++DGDG V++EEF +MM A
Sbjct: 120 EVDEMIREANIDGDGQVNYEEFVQMMTA 147
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E + DG+G +++ EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREANIDGDGQVNYEEFV 142
Query: 72 TIMGRK 77
+M K
Sbjct: 143 QMMTAK 148
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 184 bits (468), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 123/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 60
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE L+DE
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDE 120
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF +MM A
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EXLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 72 TIMGRK 77
+M K
Sbjct: 144 QMMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 184 bits (468), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 123/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE L+DE
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF +MM A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EXLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 72 TIMGRK 77
+M K
Sbjct: 143 QMMTAK 148
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 184 bits (468), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
NG+IDF EFLT+M RKMK++ EE++EAF+VFD+D +GFISAAELR+VM NLGE+L+DEE
Sbjct: 60 NGTIDFPEFLTMMARKMKDS-EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 118
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF MM +
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVTMMTS 145
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 82 EIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 72 TIMGRK 77
T+M K
Sbjct: 141 TMMTSK 146
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 184 bits (467), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 121/143 (84%), Gaps = 1/143 (0%)
Query: 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
TE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGNG+I
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTI 59
Query: 66 DFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQM 125
DF EFLT+M RKMK+ SEE++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE ++M
Sbjct: 60 DFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 126 IREADLDGDGLVSFEEFARMMMA 148
IREA++DGDG V++EEF +MM A
Sbjct: 120 IREANIDGDGQVNYEEFVQMMTA 142
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MA + + E +EAF + DKD +G I+ +L V+ + E EEV EMI E + D
Sbjct: 68 MARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREANID 126
Query: 61 GNGSIDFLEFLTIM 74
G+G +++ EF+ +M
Sbjct: 127 GDGQVNYEEFVQMM 140
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 123/149 (82%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
+ D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDAD 358
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
G+G+IDF EFLT+M RKMK SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+D
Sbjct: 359 GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 418
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG V++EEF +MM A
Sbjct: 419 EEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N+ ++L KEAF +FD+D DG I+
Sbjct: 274 LVNRIELKG---IDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTK 330
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
EL VM +LG+ ++ E + MI E D DGDG + F EF MM
Sbjct: 331 ELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 72 TIMGRK 77
+M K
Sbjct: 443 QMMTAK 448
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 123/149 (82%), Gaps = 2/149 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
+ D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDAD 358
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
G+G+IDF EFLT+M RKMK SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+D
Sbjct: 359 GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 418
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE ++MIREAD+DGDG V++EEF +MM A
Sbjct: 419 EEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N+ ++L KEAF +FD+D DG I+
Sbjct: 274 LVNRIELKG---IDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTK 330
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
EL VM +LG+ ++ E + MI E D DGDG + F EF MM
Sbjct: 331 ELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 72 TIMGRK 77
+M K
Sbjct: 443 QMMTAK 448
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 184 bits (466), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
+G+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DE
Sbjct: 60 DGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG V++EEF +MM A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 142
Query: 72 TIMGRK 77
+M K
Sbjct: 143 QMMTAK 148
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 184 bits (466), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG+
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGD 360
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 361 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 420
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 421 VDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N ++L KEAF +FD+D DG I+
Sbjct: 274 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 330
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
EL VM +LG+ ++ E + MI E D DGDG + F EF MM
Sbjct: 331 ELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 72 TIMGRK 77
+M K
Sbjct: 443 QMMTAK 448
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 184 bits (466), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 123/148 (83%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
A+ LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFL++M RKMKE SEE L EAFKVFDRD +G ISAAELR+VM NLGE+L+D+
Sbjct: 60 NGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG +++EEF RMM++
Sbjct: 120 EVDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
+D E EAF + D+D +GLI+ +L V+ + E +EV EMI E D DG+G I+
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHIN 137
Query: 67 FLEFLTIMGRK 77
+ EF+ +M K
Sbjct: 138 YEEFVRMMVSK 148
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 183 bits (465), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 122/147 (82%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGN 361
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M R MK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 362 GTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 11/105 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N ++L KEAF +FD+D DG I+
Sbjct: 275 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 331
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
EL VM +LG+ ++ E + MI E D DG+G + F EF MM +
Sbjct: 332 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARW 376
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 72 TIMGRK 77
+M K
Sbjct: 444 QMMTAK 449
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 122/145 (84%), Gaps = 2/145 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGNG+
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGT 60
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE +
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 124 QMIREADLDGDGLVSFEEFARMMMA 148
+MIREAD+DGDG V++EEF +MM A
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMMTA 145
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 72 TIMGRK 77
+M K
Sbjct: 141 QMMTAK 146
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 122/148 (82%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
A LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFL++M RKMKE SEE L EAFKVFDRD +G ISAAELR+VM NLGE+L+D+
Sbjct: 60 NGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIREAD+DGDG +++EEF RMM++
Sbjct: 120 EVDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
+D E EAF + D+D +GLI+ +L V+ + E +EV EMI E D DG+G I+
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHIN 137
Query: 67 FLEFLTIMGRK 77
+ EF+ +M K
Sbjct: 138 YEEFVRMMVSK 148
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 122/147 (82%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG+
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGD 361
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 362 GTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 421
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N ++L KEAF +FD+D DG I+
Sbjct: 275 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 331
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
EL VM +LG+ ++ E + MI E D DGDG + F EF MM
Sbjct: 332 ELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 373
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 72 TIMGRK 77
+M K
Sbjct: 444 QMMTAK 449
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/145 (64%), Positives = 122/145 (84%), Gaps = 2/145 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LT++QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGNG+
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGT 59
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
IDF EFL +M RKMK+ SEE LKEAF+VFD+D +GFISAAELR+VM NLGE+L+DEE +
Sbjct: 60 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 119
Query: 124 QMIREADLDGDGLVSFEEFARMMMA 148
+MIREAD+DGDG V++EEF ++MMA
Sbjct: 120 EMIREADVDGDGQVNYEEFVQVMMA 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 122/145 (84%), Gaps = 2/145 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGNG+
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGT 59
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE +
Sbjct: 60 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 119
Query: 124 QMIREADLDGDGLVSFEEFARMMMA 148
+MIREAD+DGDG V++EEF +MM A
Sbjct: 120 EMIREADIDGDGQVNYEEFVQMMTA 144
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 182 bits (463), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/146 (63%), Positives = 122/146 (83%), Gaps = 2/146 (1%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
A TE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGNG
Sbjct: 1 AATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNG 59
Query: 64 SIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEET 122
+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 60 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Query: 123 EQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 140
Query: 72 TIMGRK 77
+M K
Sbjct: 141 QMMTAK 146
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 182 bits (463), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 122/145 (84%), Gaps = 2/145 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGN 59
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 60 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 119
Query: 122 TEQMIREADLDGDGLVSFEEFARMM 146
++MIREAD+DGDG V++EEF +MM
Sbjct: 120 VDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 181 bits (459), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 121/144 (84%), Gaps = 2/144 (1%)
Query: 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
TE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGNG+I
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTI 59
Query: 66 DFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQ 124
DF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE ++
Sbjct: 60 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 119
Query: 125 MIREADLDGDGLVSFEEFARMMMA 148
MIREAD+DGDG V++EEF +MM A
Sbjct: 120 MIREADIDGDGQVNYEEFVQMMTA 143
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 80 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 138
Query: 72 TIMGRK 77
+M K
Sbjct: 139 QMMTAK 144
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 181 bits (459), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/143 (63%), Positives = 121/143 (84%), Gaps = 2/143 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGNG+
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGT 60
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
IDF EFLT+M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE +
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
+MIREAD+DGDG V++EEF +MM
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 181 bits (459), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 122/147 (82%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG+
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGD 352
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF EFL +M RKMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE
Sbjct: 353 GTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 412
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREAD+DGDG V++EEF +MM A
Sbjct: 413 VDEMIREADIDGDGQVNYEEFVQMMTA 439
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 376 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 434
Query: 72 TIMGRK 77
+M K
Sbjct: 435 QMMTAK 440
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 175 bits (443), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 119/147 (80%), Gaps = 2/147 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K L TV++S ++P + E+Q+MI+EV DGN
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSL-GQNPTEAELQDMINEVGADGN 361
Query: 63 GSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
G+IDF +FLT+M RKMK+ SEE ++EAF+VF +D +G+ISAA+LR+VM NLGE+L+DEE
Sbjct: 362 GTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEE 421
Query: 122 TEQMIREADLDGDGLVSFEEFARMMMA 148
++MIREA +DGDG V++E+F +MM A
Sbjct: 422 VDEMIREAGIDGDGQVNYEQFVQMMTA 448
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 11/102 (10%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL--------KEAFKVFDRDQDGFISAA 104
+++ ++ G IDF E I+G K++ N ++L KEAF +FD+D DG I+
Sbjct: 275 LVNRIELKG---IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGGITTK 331
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+L VM +LG+ ++ E + MI E DG+G + F +F MM
Sbjct: 332 QLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMM 373
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + KD +G I+ L V+ + E EEV EMI E DG+G +++ +F+
Sbjct: 385 EIREAFRVFGKDGNGYISAAQLRHVMTNL-GEKLTDEEVDEMIREAGIDGDGQVNYEQFV 443
Query: 72 TIMGRK 77
+M K
Sbjct: 444 QMMTAK 449
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 171 bits (432), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/148 (59%), Positives = 115/148 (77%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV +S ++P + E+Q+ I+EVD DG
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG-QNPTEAELQDXINEVDADG 60
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT RK K+ SEE ++EAF+VFD+D +G+ISAAELR+V NLGE+L+DE
Sbjct: 61 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 120
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E +Q IREAD+DGDG V++EEF + A
Sbjct: 121 EVDQXIREADIDGDGQVNYEEFVQXXTA 148
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 169 bits (429), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 120/148 (81%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+Q+ EF+EAF + DKD DG IT ++L TV++S ++P + E+++M+SE+D DG
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLG-QNPTEAELRDMMSEIDRDG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG++DF EFL +M RKMK+ +EE ++EAF+VFD+D +GF+SAAELR+VM LGE+LSDE
Sbjct: 60 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++MIR AD DGDG V++EEF R++++
Sbjct: 120 EVDEMIRAADTDGDGQVNYEEFVRVLVS 147
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 169 bits (428), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/148 (58%), Positives = 115/148 (77%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV +S ++P + E+Q+ I+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG-QNPTEAELQDXINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+IDF EFLT RK K+ SEE ++EAF+VFD+D +G+ISAAELR+V NLGE+L+DE
Sbjct: 60 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++ IREAD+DGDG V++EEF + A
Sbjct: 120 EVDEXIREADIDGDGQVNYEEFVQXXTA 147
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 162 bits (410), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 113/148 (76%), Gaps = 2/148 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV +S +P + E+Q+ I+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGC-NPTEAELQDXINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
NG+I+F EFLT R K+ SEE ++EAF+VFD+D +G+ISAAELR+V NLGE+L+DE
Sbjct: 60 NGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 119
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
E ++ IREAD+DGDG V++EEF + A
Sbjct: 120 EVDEXIREADIDGDGQVNYEEFVQXXTA 147
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 148 bits (374), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 111/143 (77%), Gaps = 2/143 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+QIAEF++AF DK+ G I ++L T++++ ++P + E+Q++I+E + + NG
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTL-GQNPTEAELQDLIAEAENNNNGQ 62
Query: 65 IDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
++F EF IM ++M+E + EE++EAFK+FDRD DGFIS AELR VM+NLGE+++DEE +
Sbjct: 63 LNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEID 122
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
+MIREAD DGDG++++EEF M+
Sbjct: 123 EMIREADFDGDGMINYEEFVWMI 145
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + D+D DG I+ +L V+ + E EE+ EMI E DFDG+G I++ EF+
Sbjct: 84 EMREAFKIFDRDGDGFISPAELRFVMINL-GEKVTDEEIDEMIREADFDGDGMINYEEFV 142
Query: 72 TIMGRK 77
++ +K
Sbjct: 143 WMISQK 148
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 137 bits (344), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 110/147 (74%), Gaps = 3/147 (2%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
M+ LTE+QIAEF+EAF + DKD+ G I+ +LATV++S P + EV ++++E+D D
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSL-GLSPSEAEVADLMNEIDVD 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSE-ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
GN +I+F EFL +M R++K N SE EL EAFKVFD++ DG ISAAEL++V+ ++GE+L+D
Sbjct: 60 GNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTD 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
E ++M+RE DG G ++ ++FA ++
Sbjct: 120 AEVDEMLREVS-DGSGEINIKQFAALL 145
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 136 bits (343), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 107/143 (74%), Gaps = 3/143 (2%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+QIAEF+EAF + DKD++G I+ +LATV++S P + EV ++++E+D DGN
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDGNHQ 63
Query: 65 IDFLEFLTIMGRKMKENVSE-ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
I+F EFL +M R++K N SE EL EAFKVFD++ DG ISAAEL++V+ ++GE+L+D E +
Sbjct: 64 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 123
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
M+RE DG G ++ ++FA ++
Sbjct: 124 DMLREVS-DGSGEINIQQFAALL 145
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 136 bits (343), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 107/143 (74%), Gaps = 3/143 (2%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+QIAEF+EAF + DKD++G I+ +LATV++S P + EV ++++E+D DGN
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 65 IDFLEFLTIMGRKMKENVSE-ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
I+F EFL +M R++K N SE EL EAFKVFD++ DG ISAAEL++V+ ++GE+L+D E +
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 122
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
M+RE DG G ++ ++FA ++
Sbjct: 123 DMLREVS-DGSGEINIQQFAALL 144
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 122 bits (307), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 92/120 (76%), Gaps = 2/120 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+QIAEF+EAF + DKD++G I+ +LATV++S P + EV ++++E+D DGN
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 65 IDFLEFLTIMGRKMKENVSE-ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
I+F EFL +M R++K N SE EL EAFKVFD++ DG ISAAEL++V+ ++GE+L+D E E
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D +G IS++EL VM +LG S+ E ++ E D+DG+ + F EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 120 bits (302), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I++K+L TV++ + P KEE+ +I EVD DG+G+
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLG-QTPTKEELDAIIEEVDEDGSGT 69
Query: 65 IDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
IDF EFL +M R+MKE+ EEL E F++FDR+ DG+I A EL + GE ++DE
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDE 129
Query: 121 ETEQMIREADLDGDGLVSFEEFARMM 146
E E ++++ D + DG + F+EF +MM
Sbjct: 130 EIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + EE + +I E D DG G +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 71 DFEEFLVMMV 80
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 120 bits (300), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I++K+L TV++ + P KEE+ +I EVD DG+G+
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLG-QTPTKEELDAIIEEVDEDGSGT 69
Query: 65 IDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
IDF EFL +M R+MKE+ EEL E F++FDR+ DG+I A EL + GE ++DE
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDE 129
Query: 121 ETEQMIREADLDGDGLVSFEEFARMM 146
E E ++++ D + DG + F+EF +MM
Sbjct: 130 EIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + EE + +I E D DG G +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 71 DFEEFLVMMV 80
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 117 bits (293), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 98/142 (69%), Gaps = 2/142 (1%)
Query: 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
TE+Q E +EAF + D D G I +K+L +++ E P+KEE+++MISE+D +G G +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFE-PKKEEIKKMISEIDKEGTGKM 59
Query: 66 DFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQ 124
+F +FLT+M +KM E + EE+ +AFK+FD D+ G IS L+ V LGE L+DEE ++
Sbjct: 60 NFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 119
Query: 125 MIREADLDGDGLVSFEEFARMM 146
MI EAD DGDG VS +EF R+M
Sbjct: 120 MIDEADRDGDGEVSEQEFLRIM 141
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 115 bits (288), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 98/144 (68%), Gaps = 2/144 (1%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q E +EAF + D D G I K+L +++ E P+KEE+++MI+++D DG+G
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFE-PKKEEIKKMIADIDKDGSG 59
Query: 64 SIDFLEFLTIMGRKMKENVS-EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEET 122
+IDF EFL +M KM E S EE+ +AF++FD D+ G IS L+ V LGE ++DEE
Sbjct: 60 TIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEEL 119
Query: 123 EQMIREADLDGDGLVSFEEFARMM 146
++MI EAD DGDG V+ EEF R+M
Sbjct: 120 QEMIDEADRDGDGEVNEEEFFRIM 143
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E +E++EAF +FD D G I A EL+ M LG EE ++MI + D DG G +
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 138 SFEEFARMMMA 148
FEEF +MM A
Sbjct: 62 DFEEFLQMMTA 72
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 100/146 (68%), Gaps = 5/146 (3%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I+ K+L TV++ ++P KEE+ +I EVD DG+G+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGT 72
Query: 65 IDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
IDF EFL +M R+MKE+ EEL++ F++FD++ DGFI EL ++ GE +++E
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 121 ETEQMIREADLDGDGLVSFEEFARMM 146
+ E +++++D + DG + F+EF +MM
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + EE + +I E D DG G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 74 DFEEFLVMMV 83
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 99/146 (67%), Gaps = 5/146 (3%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I+ K+L TV++ ++P KEE+ +I EVD DG+G+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGT 72
Query: 65 IDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
IDF EFL +M R+MKE+ EEL + F++FD++ DGFI EL ++ GE +++E
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 121 ETEQMIREADLDGDGLVSFEEFARMM 146
+ E +++++D + DG + F+EF +MM
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + EE + +I E D DG G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 74 DFEEFLVMMV 83
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I+ K+L TV++ ++P KEE+ +I EVD DG+G+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGT 72
Query: 65 IDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
IDF EFL +M R+MKE+ EEL F++FD++ DGFI EL ++ GE +++E
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 121 ETEQMIREADLDGDGLVSFEEFARMM 146
+ E +++++D + DG + F+EF +MM
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + EE + +I E D DG G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 74 DFEEFLVMMV 83
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 98/146 (67%), Gaps = 5/146 (3%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I+ K+L TV++ ++P KEE+ +I EVD DG+G+
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGT 69
Query: 65 IDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
IDF EFL +M R+MKE+ EEL F++FD++ DGFI EL ++ GE +++E
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 129
Query: 121 ETEQMIREADLDGDGLVSFEEFARMM 146
+ E +++++D + DG + F+EF +MM
Sbjct: 130 DIEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + EE + +I E D DG G +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 71 DFEEFLVMMV 80
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 97/146 (66%), Gaps = 5/146 (3%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I+ K+L TV++ ++P KEE+ +I EVD DG+G+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGT 72
Query: 65 IDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
IDF EFL +M R+MKE+ EEL F++FD++ DGFI EL ++ GE + +E
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEE 132
Query: 121 ETEQMIREADLDGDGLVSFEEFARMM 146
+ E +++++D + DG + F+EF +MM
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + EE + +I E D DG G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 74 DFEEFLVMMV 83
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 96/144 (66%), Gaps = 2/144 (1%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q E +EAF + D D G I K+L +++ E P+KEE+++MISE+D DG+G
Sbjct: 21 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFE-PKKEEIKKMISEIDKDGSG 79
Query: 64 SIDFLEFLTIMGRKMKENVS-EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEET 122
+IDF EFLT+M KM E S EE+ +AF++FD D G I+ +LR V LGE L++EE
Sbjct: 80 TIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEEL 139
Query: 123 EQMIREADLDGDGLVSFEEFARMM 146
++MI EAD + D + +EF R+M
Sbjct: 140 QEMIAEADRNDDNEIDEDEFIRIM 163
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E +E++EAF +FD D G I A EL+ M LG EE ++MI E D DG G +
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 138 SFEEFARMMMA 148
FEEF MM A
Sbjct: 82 DFEEFLTMMTA 92
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 63/71 (88%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
M + EELKEAFKVFD+DQ+G+ISA+ELR+VM+NLGE+L+DEE EQMI+EADLDGDG V
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQV 62
Query: 138 SFEEFARMMMA 148
++EEF +MMM
Sbjct: 63 NYEEFVKMMMT 73
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV++MI E D DG+G +++ EF+
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 72 TIM 74
+M
Sbjct: 69 KMM 71
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELR 107
EE++E D D NG I E +M ++ EE+++ K D D DG ++ E
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 108 NVMMNL 113
+MM +
Sbjct: 69 KMMMTV 74
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 61/65 (93%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EELKEAFKVFD+DQ+G+ISA+ELR+VM+NLGE+L+DEE EQMI+EADLDGDG V++EEF
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 144 RMMMA 148
+MMM
Sbjct: 64 KMMMT 68
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV++MI E D DG+G +++ EF+
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 72 TIM 74
+M
Sbjct: 64 KMM 66
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELR 107
EE++E D D NG I E +M ++ EE+++ K D D DG ++ E
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 108 NVMMNL 113
+MM +
Sbjct: 64 KMMMTV 69
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKENVS-EELKEAFK 91
NG+IDF EFLT+M RKMK+ S EE++EAF+
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DG+G + F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 61/65 (93%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EELKEAF+VFD+DQ+GFISAAELR+VM NLGE+L+DEE ++MIREAD+DGDG +++EEF
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 144 RMMMA 148
++MMA
Sbjct: 64 KVMMA 68
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G I++ EF+
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 72 TIM 74
+M
Sbjct: 64 KVM 66
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 99.0 bits (245), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 64/73 (87%), Gaps = 1/73 (1%)
Query: 77 KMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
KMK+ SEE ++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE ++MIREAD+DGDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 136 LVSFEEFARMMMA 148
V++EEF +MM A
Sbjct: 61 QVNYEEFVQMMTA 73
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 72 TIMGRK 77
+M K
Sbjct: 69 QMMTAK 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKEN 81
NG+IDF EFLT+M RKMK+
Sbjct: 60 NGTIDFPEFLTMMARKMKDT 79
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DG+G + F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMK 79
NG+IDF EFLT+M RKMK
Sbjct: 60 NGTIDFPEFLTMMARKMK 77
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DG+G + F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKEN 81
NG+IDF EFLT+M RKMK+
Sbjct: 60 NGTIDFPEFLTMMARKMKDT 79
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DG+G + F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Query: 78 MKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGL 136
MKE SEE L EAFKVFDRD +G ISAAELR+VM NLGE+L+D+E ++MIREAD+DGDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 137 VSFEEFARMMMA 148
+++EEF RMM++
Sbjct: 61 INYEEFVRMMVS 72
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
+D E EAF + D+D +GLI+ +L V+ + E +EV EMI E D DG+G I+
Sbjct: 4 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHIN 62
Query: 67 FLEFLTIMGRK 77
+ EF+ +M K
Sbjct: 63 YEEFVRMMVSK 73
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 95/147 (64%), Gaps = 6/147 (4%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN----VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
++DF EFL +M R MK++ EEL + F++FD++ DG+I EL+ ++ GE +++
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
++ E+++++ D + DG + ++EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 59/65 (90%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EE++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE ++MIREAD+DGDG V++EEF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 144 RMMMA 148
+MM A
Sbjct: 65 QMMTA 69
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 72 TIM 74
+M
Sbjct: 65 QMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 59/65 (90%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EE++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE ++MIREAD+DGDG V++EEF
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 144 RMMMA 148
+MM A
Sbjct: 66 QMMTA 70
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 72 TIMGRK 77
+M K
Sbjct: 66 QMMTAK 71
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 95/147 (64%), Gaps = 6/147 (4%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN----VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
++DF EFL +M R MK++ EEL + F++FD++ DG+I EL+ ++ GE +++
Sbjct: 71 TVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
++ E+++++ D + DG + ++EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 59/65 (90%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EE++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE ++MIREAD+DGDG V++EEF
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 144 RMMMA 148
+MM A
Sbjct: 68 QMMTA 72
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 72 TIMGRK 77
+M K
Sbjct: 68 QMMTAK 73
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 59/65 (90%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EE++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE ++MIREAD+DGDG V++EEF
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 144 RMMMA 148
+MM A
Sbjct: 62 QMMTA 66
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 72 TIMGRK 77
+M K
Sbjct: 62 QMMTAK 67
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 95/147 (64%), Gaps = 6/147 (4%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
++DF EFL +M R MK++ EEL + F++FD++ DG+I EL+ ++ GE +++
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
++ E+++++ D + DG + ++EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKM 78
NG+IDF EFLT+M RKM
Sbjct: 60 NGTIDFPEFLTMMARKM 76
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DG+G + F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 58/63 (92%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EE++EAF+VFD+D +G+ISAAELR+VM NLGE+L+DEE ++MIREAD+DGDG V++EEF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 144 RMM 146
+MM
Sbjct: 65 QMM 67
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 72 TIM 74
+M
Sbjct: 65 QMM 67
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 95.9 bits (237), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 95/147 (64%), Gaps = 6/147 (4%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
++DF EFL +M R MK++ EEL + F+++D++ DG+I EL+ ++ GE +++
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITE 130
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
++ E+++++ D + DG + ++EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 95.9 bits (237), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 95/147 (64%), Gaps = 6/147 (4%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
++DF EFL +M R MK++ EEL + F++FD++ DG+I EL+ ++ GE +++
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITE 130
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
++ E+++++ D + DG + ++E+ M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEWLEFM 157
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 95.5 bits (236), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKEN 81
+G+IDF EFLT+M RKMK+
Sbjct: 60 DGTIDFPEFLTMMARKMKDT 79
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DGDG + F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 7/149 (4%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
+L ++I E +EAF DKD DG I +DL +++ P + E+ E+ +++ + G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRT-MGYMPTEMELIELSQQINMNLGG 76
Query: 64 SIDFLEFLTIMGRKMKENVS-----EELKEAFKVFDRDQDGFISAAELRNVMMNL-GERL 117
+DF +F+ +MG K+ + +EL++AF+ FD + DG IS +ELR M L G ++
Sbjct: 77 HVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQV 136
Query: 118 SDEETEQMIREADLDGDGLVSFEEFARMM 146
+ E++IR+ DL+GDG V FEEF RMM
Sbjct: 137 GHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%)
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
GN L L+ R ++ EEL+EAF+ FD+D+DG+I+ +L N M +G ++
Sbjct: 2 GNCVKYPLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEM 61
Query: 121 ETEQMIREADLDGDGLVSFEEFARMM 146
E ++ ++ +++ G V F++F +M
Sbjct: 62 ELIELSQQINMNLGGHVDFDDFVELM 87
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLE 69
+ E ++AF D + DG I+ +L ++ +++E+I +VD +G+G +DF E
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 70 FLTIMGR 76
F+ +M R
Sbjct: 161 FVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
M +L ++I E +EAF DKD DG I +DL +++ P + E+ E+ +++ +
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMN 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSE-----ELKEAFKVFDRDQDGFISAAELRNVMMNL-G 114
G +DF +F+ +MG K+ ++ EL++AF+ FD + DG IS +ELR M L G
Sbjct: 60 LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLG 119
Query: 115 ERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
++ + E++IR+ DL+GDG V FEEF RMM
Sbjct: 120 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLE 69
+ E ++AF D + DG I+ +L ++ +++E+I +VD +G+G +DF E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 70 FLTIMGR 76
F+ +M R
Sbjct: 147 FVRMMSR 153
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 61/71 (85%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
M + EE++EAF+VFD+D +G+ISAA+LR+VM NLGE+L+DEE ++MIREAD+DGDG V
Sbjct: 1 MDTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 60
Query: 138 SFEEFARMMMA 148
++E+F +MM A
Sbjct: 61 NYEDFVQMMTA 71
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ DL V+ + E EEV EMI E D DG+G +++ +F+
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 72 TIMGRK 77
+M K
Sbjct: 67 QMMTAK 72
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
M +L ++I E +EAF DKD DG I +DL +++ P + E+ E+ +++ +
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMN 59
Query: 61 GNGSIDFLEFLTIMGRKMKENVSE-----ELKEAFKVFDRDQDGFISAAELRNVMMNL-G 114
G +DF +F+ +MG K+ ++ EL++AF+ FD + DG IS +ELR M L G
Sbjct: 60 LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLG 119
Query: 115 ERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
++ + E++IR+ DL+GDG V FEEF RMM
Sbjct: 120 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLE 69
+ E ++AF D + DG I+ +L +++ +++E+I +VD +G+G +DF E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 70 FLTIMGR 76
F+ +M R
Sbjct: 147 FVRMMSR 153
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DGN
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGN 60
Query: 63 GSIDFLEFLTIMGRKM 78
G+IDF EFLT+M RKM
Sbjct: 61 GTIDFPEFLTMMARKM 76
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DG+G + F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 59/67 (88%), Gaps = 1/67 (1%)
Query: 49 EVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVS-EELKEAFKVFDRDQDGFISAAELR 107
E+Q+MI+EVD DGNG+IDF EFLT+M RKMK+ S EE++EAF+VFD+D +G+ISAAELR
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 108 NVMMNLG 114
+VM NLG
Sbjct: 62 HVMTNLG 68
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 121 ETEQMIREADLDGDGLVSFEEFARMM 146
E + MI E D DG+G + F EF MM
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMM 27
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 94/147 (63%), Gaps = 6/147 (4%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
++DF EFL +M R MK++ EEL + F++ D++ DG+I EL+ ++ GE +++
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITE 130
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
++ E+++++ D + DG + ++EF M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 94/147 (63%), Gaps = 6/147 (4%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKENVS----EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
++DF EFL +M R MK++ EEL + F++FD++ DG+I EL+ ++ GE +++
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITE 130
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
++ E+++++ D + DG + ++E M
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEXLEFM 157
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRK 77
NG+IDF EFLT+M RK
Sbjct: 60 NGTIDFPEFLTMMARK 75
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DG+G + F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LTE+QIAEF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADG 60
Query: 62 NGSIDFLEFLTIMGRK 77
NG+IDF EFLT+M RK
Sbjct: 61 NGTIDFPEFLTMMARK 76
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DG+G + F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 145 MM 146
MM
Sbjct: 72 MM 73
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 58/65 (89%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EE++EAF+V D+D +G+ISAAELR+VM NLGE+L+DEE ++MIREAD+DGDG V++EEF
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 144 RMMMA 148
+MM A
Sbjct: 89 QMMTA 93
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DKD +G I+ +L V+ + E EEV EMI E D DG+G +++ EF+
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 72 TIMGRK 77
+M K
Sbjct: 89 QMMTAK 94
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD LT++QI+EF+EAF + DKD DG IT K+L TV++S ++P + E+Q+MI+EVD DG
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKE 80
NG+IDF EFL +M RKMK+
Sbjct: 60 NGTIDFPEFLNLMARKMKD 78
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D DG I+ EL VM +LG+ ++ E + MI E D DG+G + F EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 92.8 bits (229), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD L+E+QI +F+EAF + DKD DG IT+++LATVI+S D++P +EE+Q+MISEVD DG
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKMKEN 81
NG+I+F EFL++M +K+K+
Sbjct: 60 NGTIEFDEFLSLMAKKVKDT 79
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
+ KEAF +FD+D DG I+ EL V+ +L + ++EE + MI E D DG+G + F+EF
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 92.8 bits (229), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
+ QI EF+EAF MID++ DG I +DL ++ S ++P E ++ M+SE G I+
Sbjct: 3 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-MGKNPTDEYLEGMMSEAP----GPIN 57
Query: 67 FLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQM 125
F FLT+ G K+ E+ ++ AF FD + GFI LR ++ +G+R +DEE ++M
Sbjct: 58 FTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEM 117
Query: 126 IREADLDGDGLVSFEEFARMM 146
REA +D G ++ EF R++
Sbjct: 118 YREAPIDKKGNFNYVEFTRIL 138
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 92.8 bits (229), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVI-QSAQDEHPRKEEVQEMISEVDFDGNGSI 65
+DQ++EF+EAF + D + G IT + L TV+ Q P EM +E D GNG I
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEP--AAFNEMFNEADATGNGKI 59
Query: 66 DFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQ 124
F EFL++MGR+MK+ SE+ L++AF+ FD + G+I A L++ ++NLG+RL E +
Sbjct: 60 QFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAE 119
Query: 125 MIREADLDGDGLVSFEEFARMMMA 148
+ + + G + ++ F M
Sbjct: 120 FLGITETE-KGQIRYDNFINTMFT 142
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
D LTE+QIAEF+EAF + DKD DG IT K+L TV++S +P + E+Q+MI+EVD DGN
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSL-GLNPTEAELQDMINEVDADGN 60
Query: 63 GSIDFLEFLTIMGRKMK 79
G+IDF EFLT+M R MK
Sbjct: 61 GTIDFPEFLTMMARIMK 77
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF ++D+D DG I+ EL VM +LG ++ E + MI E D DG+G + F EF
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD L+E+QI +F+EAF + DKD DG IT+++LATVI+S D++P +EE+Q+MISEVD DG
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEVDADG 59
Query: 62 NGSIDFLEFLTIMGRKM 78
NG+I+F EFL++M +K+
Sbjct: 60 NGTIEFDEFLSLMAKKV 76
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
+ KEAF +FD+D DG I+ EL V+ +L + ++EE + MI E D DG+G + F+EF
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 89.4 bits (220), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L E+Q E EAF + D ++DG + +L +++ E P++E + ++I E D +G
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE-ILDLIDEYDSEGRHL 75
Query: 65 IDFLEFLTIMGRK-MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
+ + +F +MG K +K + +E+K AF++FD D G IS LR V LGE L+DEE
Sbjct: 76 MKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELR 135
Query: 124 QMIREADLDGDGLVSFEEF 142
MI E DLDGDG ++ EF
Sbjct: 136 AMIEEFDLDGDGEINENEF 154
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 74 MGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDG 133
+ ++ E +E+ EAF +FD + DGF+ EL+ M LG L E +I E D +G
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEG 72
Query: 134 DGLVSFEEFARMM 146
L+ +++F +M
Sbjct: 73 RHLMKYDDFYIVM 85
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L D + E + AF + D D G I++K+L V + E EE++ MI E D DG+G
Sbjct: 90 LKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRAMIEEFDLDGDGE 148
Query: 65 IDFLEFLTI 73
I+ EF+ I
Sbjct: 149 INENEFIAI 157
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+Q E +EAF + D D G I +K+L V A P+KEE+++ ISE+D +G G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELK-VAXRALGFEPKKEEIKKXISEIDKEGTGK 83
Query: 65 IDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
+F +FLT+ +K E + EE+ +AFK+FD D+ G IS L+ V LGE L+DEE +
Sbjct: 84 XNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 143
Query: 124 QMIREADLDGDGLVSFEEFARM 145
+ I EAD DGDG VS +EF R+
Sbjct: 144 EXIDEADRDGDGEVSEQEFLRI 165
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L E+Q E EAF + D ++DG + +L ++ E P++E + ++I E D +G
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKRE-ILDLIDEYDSEGRHL 75
Query: 65 IDFLEFLTIMGRK-MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
+ +F + G K +K + +E+K AF++FD D G IS LR V LGE L+DEE
Sbjct: 76 XKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELR 135
Query: 124 QMIREADLDGDGLVSFEEF 142
I E DLDGDG ++ EF
Sbjct: 136 AXIEEFDLDGDGEINENEF 154
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 74 MGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDG 133
+ ++ E +E+ EAF +FD + DGF+ EL+ LG L E +I E D +G
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEG 72
Query: 134 DGLVSFEEF 142
L +++F
Sbjct: 73 RHLXKYDDF 81
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L D + E + AF + D D G I++K+L V + E EE++ I E D DG+G
Sbjct: 90 LKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRAXIEEFDLDGDGE 148
Query: 65 IDFLEFLTI 73
I+ EF+ I
Sbjct: 149 INENEFIAI 157
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD--GN 62
+E+Q AEF+EAF + D+ DG I V++ A ++P EV +++ D
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMR-ALGQNPTNAEVMKVLGNPKSDEMNL 59
Query: 63 GSIDFLEFLTIM---GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
++ F +FL +M + + E+ E +VFD++ +G + AE+R+V++ LGE++++
Sbjct: 60 KTLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 119
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE EQ++ + D +G +++EE RM+++
Sbjct: 120 EEVEQLVAGHE-DSNGCINYEELVRMVLS 147
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 83/139 (59%), Gaps = 6/139 (4%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
+ QE F + DKD+DG +++++L + ++S ++P E+ + +++ D F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSL-GKNPTNAELNTIKGQLNAK---EFDLATFK 61
Query: 72 TIMGRKMKENV--SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREA 129
T+ + +K S+E+ +AF+ D++ +G I AELR +++NLG+ L+ E E++++E
Sbjct: 62 TVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEV 121
Query: 130 DLDGDGLVSFEEFARMMMA 148
+ GDG +++E F M++
Sbjct: 122 SVSGDGAINYESFVDMLVT 140
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 28/39 (71%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
+++++E F++FD+D DG +S EL + + +LG+ ++ E
Sbjct: 4 ADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAE 42
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDF 67
+Q E +AF +DK+ +G I +L ++ + D EV+E++ EV G+G+I++
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL-TSSEVEELMKEVSVSGDGAINY 131
Query: 68 LEFLTIM 74
F+ ++
Sbjct: 132 ESFVDML 138
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD--GN 62
+E+Q AEF+EAF + D+ DG I V++ A ++P EV +++ D
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMR-ALGQNPTNAEVMKVLGNPKSDEMNL 61
Query: 63 GSIDFLEFLTIM---GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
++ F +FL +M + + E+ E +VFD++ +G + AE+R+V++ LGE++++
Sbjct: 62 KTLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 121
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE EQ++ + D +G +++EE RM+++
Sbjct: 122 EEVEQLVAGHE-DSNGCINYEELVRMVLS 149
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L++ Q+ E +EAF MID+D DG I M+DL + S+ P +E+ M+ E G
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMF-SSLGRVPPDDELNAMLKECP----GQ 64
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
++F FLT+ G K+ E+ L+ AF +FD D GFI L++++ N+G+ S EE +
Sbjct: 65 LNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIK 124
Query: 124 QMIREADL 131
+ ++A L
Sbjct: 125 NVWKDAPL 132
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 77 KMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGL 136
K+ + +ELKEAF + D+D+DGFI +L+++ +LG D+E M++E G
Sbjct: 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQ 64
Query: 137 VSFEEF 142
++F F
Sbjct: 65 LNFTAF 70
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+QIAEF+EAF + DKD++G I+ +LATV++S P + EV ++++E+D DGN
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 65 IDFLEFLTIMGRKMK 79
I+F EFL +M R++K
Sbjct: 63 IEFSEFLALMSRQLK 77
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
E KEAF +FD+D +G IS++EL VM +LG S+ E ++ E D+DG+ + F EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
A+ L+E++I +E F MID D+ G IT +L ++ E + E+++++ D D
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSE-LMESEIKDLMDAADIDK 59
Query: 62 NGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
+G+ID+ EF+ K E L AF FD+D G+I+ E++ + G L D
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIH 117
Query: 122 TEQMIREADLDGDGLVSFEEFARMM 146
+ MI+E D D DG + + EFA MM
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFAAMM 142
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 16 AFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMG 75
AF DKD G IT+ ++ Q+ +D + +MI E+D D +G ID+ EF +M
Sbjct: 87 AFSYFDKDGSGYITLDEIQ---QACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMM- 142
Query: 76 RKMKEN 81
RK K N
Sbjct: 143 RKRKGN 148
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
T+ Q+ EF+EAF +ID+D DG I+ D+ S ++E+ M++E G
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSL-GRLCTEQELDSMVAEAP----GP 105
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
I+F FLTI G ++ E+ + AF +FD + DG L+ + GE+ S +E +
Sbjct: 106 INFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVD 164
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
Q + EA +DG+GL+ ++FA+++
Sbjct: 165 QALSEAPIDGNGLIDIKKFAQIL 187
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE 80
++EV + +SE DGNG ID +F I+ + KE
Sbjct: 160 QDEVDQALSEAPIDGNGLIDIKKFAQILTKGAKE 193
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 65 IDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
++F +FLT+M +KM E + EE+ +AFK+FD D+ G IS L+ V LGE L+DEE +
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
+MI EAD DGDG VS +EF R+M
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIM 83
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
+D E +AF + D D G I+ K+L V + E+ EE+QEMI E D DG+G +
Sbjct: 17 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEMIDEADRDGDGEVS 75
Query: 67 FLEFLTIMGR 76
EFL IM +
Sbjct: 76 EQEFLRIMKK 85
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 32 DLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVS-EELKEAF 90
D TV+ E KEE+ + D D G I F + L + +++ EN++ EEL+E
Sbjct: 5 DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISF-KNLKRVAKELGENLTDEELQEMI 63
Query: 91 KVFDRDQDGFISAAELRNVM 110
DRD DG +S E +M
Sbjct: 64 DEADRDGDGEVSEQEFLRIM 83
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
M D+I + F +D D+ G +++++ ++ + Q+ VQ +I D D
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPL-----VQRVIDIFDTD 64
Query: 61 GNGSIDFLEFLTIMGR-KMKENVSEELKEAFKVFDRDQDGFISAAELRNVM-MNLGERLS 118
GNG +DF EF+ + + +K + ++L+ AF+++D D+DG+IS EL V+ M +G L
Sbjct: 65 GNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 124
Query: 119 DEETEQM----IREADLDGDGLVSFEEFARMM 146
D + +Q+ I AD DGDG +SFEEF ++
Sbjct: 125 DTQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
+ L + FK D D G +S E M+L E + +++I D DG+G V F+EF
Sbjct: 20 KRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFI 75
Query: 144 RMMMAF 149
+ F
Sbjct: 76 EGVSQF 81
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
M D+I + F +D D+ G +++++ ++ + Q+ VQ +I D D
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPL-----VQRVIDIFDTD 65
Query: 61 GNGSIDFLEFLTIMGR-KMKENVSEELKEAFKVFDRDQDGFISAAELRNVM-MNLGERLS 118
GNG +DF EF+ + + +K + ++L+ AF+++D D+DG+IS EL V+ M +G L
Sbjct: 66 GNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 125
Query: 119 DEETEQM----IREADLDGDGLVSFEEFARMM 146
D + +Q+ I AD DGDG +SFEEF ++
Sbjct: 126 DTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
+ L + FK D D G +S E M+L E + +++I D DG+G V F+EF
Sbjct: 21 KRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFI 76
Query: 144 RMMMAF 149
+ F
Sbjct: 77 EGVSQF 82
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVS-----EELKEAFKVFDRDQDGFI 101
K ++++I E D GNG IDF F I R + E V+ +EL+EAF+++D++ +G+I
Sbjct: 49 KSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYI 108
Query: 102 SAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148
S +R ++ L E LS E+ + MI E D DG G V FEEF +M
Sbjct: 109 STDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 85/145 (58%), Gaps = 11/145 (7%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDF 67
D+I + F +D D+ G +++++ ++ + Q+ VQ +I D DGNG +DF
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPL-----VQRVIDIFDTDGNGEVDF 58
Query: 68 LEFLTIMGR-KMKENVSEELKEAFKVFDRDQDGFISAAELRNVM-MNLGERLSDEETEQM 125
EF+ + + +K + ++L+ AF+++D D+DG+IS EL V+ M +G L D + +Q+
Sbjct: 59 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQI 118
Query: 126 ----IREADLDGDGLVSFEEFARMM 146
I AD DGDG +SFEEF ++
Sbjct: 119 VDKTIINADKDGDGRISFEEFCAVV 143
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
+ L + FK D D G +S E M+L E + +++I D DG+G V F+EF
Sbjct: 7 KRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFI 62
Query: 144 RMMMAF 149
+ F
Sbjct: 63 EGVSQF 68
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 85/145 (58%), Gaps = 11/145 (7%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDF 67
D+I + F +D D+ G +++++ ++ + Q+ VQ +I D DGNG +DF
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPL-----VQRVIDIFDTDGNGEVDF 57
Query: 68 LEFLTIMGR-KMKENVSEELKEAFKVFDRDQDGFISAAELRNVM-MNLGERLSDEETEQM 125
EF+ + + +K + ++L+ AF+++D D+DG+IS EL V+ M +G L D + +Q+
Sbjct: 58 KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQI 117
Query: 126 ----IREADLDGDGLVSFEEFARMM 146
I AD DGDG +SFEEF ++
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVV 142
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
+ L + FK D D G +S E M+L E + +++I D DG+G V F+EF
Sbjct: 6 KRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFI 61
Query: 144 RMMMAF 149
+ F
Sbjct: 62 EGVSQF 67
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 5 LTEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
L++D+I + ++ F + D DG + L V + +PR E+V + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLG-INPRNEDVF-AVGGTHKMGE 60
Query: 63 GSIDFLEFLTIMGRKM--KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
S+ F EFL M ++ + EAFK FDR+ GFIS AELR+V+ LGERLSDE
Sbjct: 61 KSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
Query: 121 ETEQMIREADL--DGDGLVSFEEFARMMMA 148
E +++I DL D +G V +EEF + +MA
Sbjct: 121 EVDEIINLTDLQEDLEGNVKYEEFVKKVMA 150
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 5 LTEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
L++D+I + +E F + D DG + + V + +PR E+V + G
Sbjct: 4 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGI-NPRNEDVF-AVGGTHKMGE 61
Query: 63 GSIDFLEFLTIMGRKM--KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
S+ F EFL M ++ + EAFK FDR+ GFIS AELR+V+ LGERLSDE
Sbjct: 62 KSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 121
Query: 121 ETEQMIREADL--DGDGLVSFEEFARMMMA 148
E +++I DL D +G V +EEF + +M
Sbjct: 122 EVDEIINLTDLQEDLEGNVKYEEFVKKVMT 151
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 5 LTEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
L++D+I + +E F + D DG + + V + +PR E+V + G
Sbjct: 3 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGI-NPRNEDVF-AVGGTHKMGE 60
Query: 63 GSIDFLEFLTIMGRKM--KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
S+ F EFL M ++ + EAFK FDR+ GFIS AELR+V+ LGERLSDE
Sbjct: 61 KSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
Query: 121 ETEQMIREADL--DGDGLVSFEEFARMMMA 148
E +++I DL D +G V +EEF + +M
Sbjct: 121 EVDEIINLTDLQEDLEGNVKYEEFVKKVMT 150
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD--GN 62
+DQ+ EF+EAF + D+ DG I V++ A ++P EV +++ D +
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMR-ALGQNPTNAEVLKVLGNPKSDELKS 62
Query: 63 GSIDFLEFLTIM---GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
+DF FL ++ + + E+ E F+VFD++ +G + AELR+V+ LGE++++
Sbjct: 63 RRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTE 122
Query: 120 EETEQMIREADLDGDGLVSFEEFARMMMA 148
EE E ++ + D +G +++E F + +++
Sbjct: 123 EEVETVLAGHE-DSNGCINYEAFLKHILS 150
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEF 70
+ +++AF + D+ G I + +++ A ++P E+ E+ S + +D +F
Sbjct: 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLR-ACGQNPTLAEITEIESTLP----AEVDMEQF 59
Query: 71 LTIMGRKMKENVS---EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIR 127
L ++ R ++ EE + F+VFD+D G I ELR V+ +LGE+LS+EE +++++
Sbjct: 60 LQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK 119
Query: 128 EADLDGDGLVSFEEFARMMMA 148
+ DG+V++ +F +M++A
Sbjct: 120 GVPVK-DGMVNYHDFVQMILA 139
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
E+L+ AF+ FD+D DG I+ ELR M LG+ L EE + MIREAD+D DG V++EEFA
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 144 RMM 146
RM+
Sbjct: 66 RML 68
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
+ Q AF D+D DG IT+ +L + P +EE+ MI E D D +G +++ EF
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLP-QEELDAMIREADVDQDGRVNYEEFA 65
Query: 72 TIMGRK 77
++ ++
Sbjct: 66 RMLAQE 71
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 5 LTEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
L++D+I + ++ F + D DG + L V + +PR E+V + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLG-INPRNEDVF-AVGGTHKMGE 60
Query: 63 GSIDFLEFLTIMGRKM--KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
S+ F EFL M ++ + EAFK FDR+ GFIS AELR+V+ LGERLSDE
Sbjct: 61 KSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 120
Query: 121 ETEQMIREADL--DGDGLVSFEEFARMMMA 148
+ +++I+ DL D +G V +E+F + +MA
Sbjct: 121 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 5 LTEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
L++D+I + ++ F + D DG + L V + +PR E+V + G
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLG-INPRNEDVF-AVGGTHKMGE 58
Query: 63 GSIDFLEFLTIMGRKM--KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
S+ F EFL M ++ + EAFK FDR+ GFIS AELR+V+ LGERLSDE
Sbjct: 59 KSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 118
Query: 121 ETEQMIREADL--DGDGLVSFEEFARMMMA 148
+ +++I+ DL D +G V +E+F + +MA
Sbjct: 119 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 5 LTEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
L++D+I + ++ F + D DG + L V + +PR E+V + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLG-INPRNEDVF-AVGGTHKMGE 60
Query: 63 GSIDFLEFLTIMGRKM--KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
S+ F EFL M ++ + EAFK FDR+ GFIS AELR+V+ LGERLSDE
Sbjct: 61 KSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 120
Query: 121 ETEQMIREADL--DGDGLVSFEEFARMMMA 148
+ +++I+ DL D +G V +E+F + +MA
Sbjct: 121 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I+ K+L TV++ ++P KEE+ +I EVD DG+G+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGSGT 72
Query: 65 IDFLEFLTIMGRKMKENV 82
IDF EFL +M R+MKE+
Sbjct: 73 IDFEEFLVMMVRQMKEDA 90
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + EE + +I E D DG G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 74 DFEEFLVMMV 83
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 6 TEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
++D+I + ++ F + D DG + L V + +PR E+V + G
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLG-INPRNEDVF-AVGGTHKMGEK 58
Query: 64 SIDFLEFLTIMGRKM--KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
S+ F EFL M ++ + EAFK FDR+ GFIS AELR+V+ LGERLSDE+
Sbjct: 59 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 118
Query: 122 TEQMIREADL--DGDGLVSFEEFARMMMA 148
+++I+ DL D +G V +E+F + +MA
Sbjct: 119 VDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I+ K L TV++ ++P KEE+ +I EVD DG+G+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRML-GQNPTKEELDAIIEEVDEDGSGT 72
Query: 65 IDFLEFLTIMGRKMKENV 82
IDF EFL +M R+MKE+
Sbjct: 73 IDFEEFLVMMVRQMKEDA 90
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS L VM LG+ + EE + +I E D DG G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 74 DFEEFLVMMV 83
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 12/144 (8%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLE 69
+ + + AF +D++ G IT L ++ + P ++ ++ ++D DG+G+ID+ E
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL--LLDQIDSDGSGNIDYTE 111
Query: 70 FLT--IMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE-----T 122
FL I R++ + + + AF+VFD D DG I+ AEL +V+ N +R + E
Sbjct: 112 FLAAAIDRRQLSKKL---IYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQV 168
Query: 123 EQMIREADLDGDGLVSFEEFARMM 146
++MIRE D +GDG + F EF+ MM
Sbjct: 169 KKMIREVDKNGDGKIDFYEFSEMM 192
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 71 LTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREAD 130
+TI+ ++ + ++LK AF D + G I+ +LR + G L + ++ + D
Sbjct: 42 MTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLP-PNFDLLLDQID 100
Query: 131 LDGDGLVSFEEF 142
DG G + + EF
Sbjct: 101 SDGSGNIDYTEF 112
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 6 TEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
++D+I + ++ F + D DG + L V + +PR E+V + G
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLG-INPRNEDVF-AVGGTHKMGEK 58
Query: 64 SIDFLEFLTIMGRKM--KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
S+ F EFL M ++ + EAFK FDR+ GFIS AELR+V+ LGERLSDE+
Sbjct: 59 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 118
Query: 122 TEQMIREADL--DGDGLVSFEEFARMMMA 148
+++I+ DL D +G V +E+F + +MA
Sbjct: 119 VDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q E +EAF + D D G I K+L +++ E P+KEE+++MISE+D DG+G
Sbjct: 23 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFE-PKKEEIKKMISEIDKDGSG 81
Query: 64 SIDFLEFLTIMGRKM 78
+IDF EFLT+M KM
Sbjct: 82 TIDFEEFLTMMTAKM 96
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E +E++EAF +FD D G I A EL+ M LG EE ++MI E D DG G +
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 138 SFEEFARMMMA 148
FEEF MM A
Sbjct: 84 DFEEFLTMMTA 94
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.6 bits (166), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLA---TVIQSAQDEHPR----KEEVQEMISEVD 58
T ++ E + F +DK+ DG + K+L V+++ ++E +EEV ++ EVD
Sbjct: 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD 409
Query: 59 FDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLS 118
FD NG I++ EF+++ K E L+ AF +FD D+ G I+ EL N+ +S
Sbjct: 410 FDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTS--IS 467
Query: 119 DEETEQMIREADLDGDGLVSFEEFARMM 146
++ ++ EAD + D ++ F+EF MM
Sbjct: 468 EKTWNDVLGEADQNKDNMIDFDEFVSMM 495
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 59 FDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAEL-------RNVMM 111
F+G+ + L I + +EL + FK D++ DG + EL RN
Sbjct: 330 FEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKN 389
Query: 112 NLGE-RLSDEETEQMIREADLDGDGLVSFEEFARMMM 147
LGE + +EE + +++E D D +G + + EF + M
Sbjct: 390 ELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCM 426
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
+A++L+E++IA +E F ID D G IT ++L ++ + ++ E+ ++ D D
Sbjct: 17 IAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRV-GANLKESEILDLXQAADVD 75
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
+G+ID+ EF+ K + L AF FD+D G+I+ EL+ G + D
Sbjct: 76 NSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDV 133
Query: 121 ETEQMIREADLDGDGLVSFEEF 142
E++ R+ D D DG + + EF
Sbjct: 134 RIEELXRDVDQDNDGRIDYNEF 155
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 76 RKMKENVSEE----LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADL 131
R + E++SEE LKE F D D+ G I+ EL+ + +G L + E + + AD+
Sbjct: 15 RVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADV 74
Query: 132 DGDGLVSFEEF 142
D G + ++EF
Sbjct: 75 DNSGTIDYKEF 85
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 16 AFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLT 72
AF DKD G IT +L + E R ++E+ +VD D +G ID+ EF+
Sbjct: 104 AFTYFDKDGSGYITPDELQQACEEFGVEDVR---IEELXRDVDQDNDGRIDYNEFVA 157
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Query: 44 HPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM--KENVSEELKEAFKVFDRDQDGFI 101
+PR E+V + G S+ F EFL M ++ + EAFK FDR+ GFI
Sbjct: 43 NPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFI 101
Query: 102 SAAELRNVMMNLGERLSDEETEQMIREADL--DGDGLVSFEEFARMMMA 148
S AELR+V+ LGERLSDE+ +++I+ DL D +G V +E+F + +MA
Sbjct: 102 SGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I+ K+L TV++ ++P KEE+ +I EVD DG+G+
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGT 61
Query: 65 IDFLEFLTIMGRKMK 79
IDF EFL +M R+MK
Sbjct: 62 IDFEEFLVMMVRQMK 76
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + EE + +I E D DG G +
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 63 DFEEFLVMMV 72
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+ IAEF+ AF M D D G I+ K+L TV++ ++P K E+ +I EVD DG+G+
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKCELDAIICEVDEDGSGT 72
Query: 65 IDFLEFLTIMGRKMKENV 82
IDF EFL +M R+MKE+
Sbjct: 73 IDFEEFLVMMVRQMKEDA 90
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E + E K AF +FD D G IS EL VM LG+ + E + +I E D DG G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 138 SFEEFARMMM 147
FEEF MM+
Sbjct: 74 DFEEFLVMMV 83
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E+ EE++EAFKVFDRD +GFIS EL M +LG ++ E E +I+ D+DGDG V
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 138 SFEEFARMM 146
FEEF ++
Sbjct: 90 DFEEFVTLL 98
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
+ ED++ E +EAF + D+D +G I+ ++L T ++S P + E++ +I +D DG+G
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRLDMDGDGQ 88
Query: 65 IDFLEFLTIMG 75
+DF EF+T++G
Sbjct: 89 VDFEEFVTLLG 99
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 86/152 (56%), Gaps = 19/152 (12%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS--- 64
D+I +F+EAF + D+ D IT+ + +++ A ++P E+ +++ GN S
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVR-ALGQNPTNAEINKIL------GNPSKEE 53
Query: 65 -----IDFLEFLTIM---GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER 116
I F EFL ++ + E+ E +VFD++ +G + AELR+V+ LGE+
Sbjct: 54 MNAKKITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK 113
Query: 117 LSDEETEQMIREADLDGDGLVSFEEFARMMMA 148
+++EE E++++ + D +G +++E F + +M+
Sbjct: 114 MTEEEVEELMKGQE-DSNGCINYEAFVKHIMS 144
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLE 69
+ + + F ++D+D G IT + L ++ + P ++ ++ ++D DG+G ID+ E
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYTE 108
Query: 70 FLTI-MGRKMKENVSEELKE-AFKVFDRDQDGFISAAELRNVMMNLGERLSD------EE 121
F+ + RK +S++L AF+VFD D DG I+ AEL +++ N G + +
Sbjct: 109 FIAAALDRKQ---LSKKLIYCAFRVFDVDNDGEITTAELAHILYN-GNKKGNITQRDVNR 164
Query: 122 TEQMIREADLDGDGLVSFEEFARMM 146
++MIR+ D + DG + F EF+ MM
Sbjct: 165 VKRMIRDVDKNNDGKIDFHEFSEMM 189
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 71 LTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREAD 130
+TI+ ++ + E+LK F V D D G+I+ +L+ + G +L + ++ + D
Sbjct: 39 MTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQID 97
Query: 131 LDGDGLVSFEEF 142
DG G + + EF
Sbjct: 98 SDGSGKIDYTEF 109
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
E +I +F+EAF +ID+++DG+I DL + + + EE+ MI E +G I+
Sbjct: 3 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPIN 58
Query: 67 FLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQM 125
F FLT+ G K+K E+ + AFKV D D G I + L ++ G R + EE + M
Sbjct: 59 FTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNM 118
Query: 126 IREADLDGDGLVSFEEFARMM 146
D G V ++ ++
Sbjct: 119 WAAFPPDVAGNVDYKNICYVI 139
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
E +I +F+EAF +ID+++DG+I DL + + + EE+ MI E +G I+
Sbjct: 21 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPIN 76
Query: 67 FLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQM 125
F FLT+ G K+K E+ + AFKV D D G I + L ++ G R + EE + M
Sbjct: 77 FTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNM 136
Query: 126 IREADLDGDGLVSFEEFARMM 146
D G V ++ ++
Sbjct: 137 WAAFPPDVAGNVDYKNICYVI 157
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 25/164 (15%)
Query: 1 MADALT-EDQIAEFQEAFCMIDKDSDG-------------LITMKDL-ATVIQSAQDEHP 45
M LT +D+ E F +DK+ DG L+ MK A+++ ++ EH
Sbjct: 347 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH- 405
Query: 46 RKEEVQEMISEVDFDGNGSIDFLEFLTI-MGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
EV +++ VDFD NG I++ EF+T+ M RK + E L+ AF++FD D G IS+
Sbjct: 406 ---EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLS-RERLERAFRMFDSDNSGKISST 461
Query: 105 ELRNVMMNLGERLSDEET-EQMIREADLDGDGLVSFEEFARMMM 147
EL + G D ET + ++ E D + DG V F+EF +M++
Sbjct: 462 ELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 25/164 (15%)
Query: 1 MADALT-EDQIAEFQEAFCMIDKDSDGLITMKDL--------------ATVIQSAQDEHP 45
M LT +D+ E F +DK+ DG + +L A+++ ++ EH
Sbjct: 324 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH- 382
Query: 46 RKEEVQEMISEVDFDGNGSIDFLEFLTI-MGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
EV +++ VDFD NG I++ EF+T+ M RK + E L+ AF++FD D G IS+
Sbjct: 383 ---EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLS-RERLERAFRMFDSDNSGKISST 438
Query: 105 ELRNVMMNLGERLSDEET-EQMIREADLDGDGLVSFEEFARMMM 147
EL + G D ET + ++ E D + DG V F+EF +M++
Sbjct: 439 ELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 76 RKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD 134
+KM E + EE+ +AFK+FD D+ G IS L+ V LGE L+DEE ++MI EAD DGD
Sbjct: 2 QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGD 61
Query: 135 GLVSFEEFARMM 146
G VS +EF R+M
Sbjct: 62 GEVSEQEFLRIM 73
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
+D E +AF + D D G I+ K+L V + E+ EE+QEMI E D DG+G +
Sbjct: 7 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEMIDEADRDGDGEVS 65
Query: 67 FLEFLTIMGR 76
EFL IM +
Sbjct: 66 EQEFLRIMKK 75
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 43 EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVS-EELKEAFKVFDRDQDGFI 101
E KEE+ + D D G I F + L + +++ EN++ EEL+E DRD DG +
Sbjct: 6 EKDTKEEILKAFKLFDDDETGKISF-KNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 64
Query: 102 SAAELRNVM 110
S E +M
Sbjct: 65 SEQEFLRIM 73
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 25/164 (15%)
Query: 1 MADALT-EDQIAEFQEAFCMIDKDSDG-------------LITMKDL-ATVIQSAQDEHP 45
M LT +D+ E F +DK+ DG L+ MK A+++ ++ EH
Sbjct: 348 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEH- 406
Query: 46 RKEEVQEMISEVDFDGNGSIDFLEFLTI-MGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
EV +++ VDFD NG I++ EF+T+ M RK + E L+ AF++FD D G IS+
Sbjct: 407 ---EVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLS-RERLERAFRMFDSDNSGKISST 462
Query: 105 ELRNVMMNLGERLSDEET-EQMIREADLDGDGLVSFEEFARMMM 147
EL + G D ET + ++ E D + DG V F+EF +M++
Sbjct: 463 ELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQ----------SAQDEHPRKEEVQEMIS 55
++D+ E F DK+ DG + +L + S D + EV +++
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLD 389
Query: 56 EVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE 115
VDFD NG I++ EF+T+ + E L+ AF+ FD D G IS+ EL + G
Sbjct: 390 AVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI---FGV 446
Query: 116 RLSDEET-EQMIREADLDGDGLVSFEEFARMMM 147
D ET + ++ E D + DG V F+EF + ++
Sbjct: 447 SDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLL 479
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LTE+Q E +EAF + D D G I +K+L +++ E P+KEE+++MISE+D +G G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFE-PKKEEIKKMISEIDKEGTGK 83
Query: 65 IDFLEFLTIMGRKM 78
++F +FLT+M +KM
Sbjct: 84 MNFGDFLTVMTQKM 97
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E +E++EAF +FD D G I EL+ M LG EE ++MI E D +G G +
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 138 SFEEFARMM 146
+F +F +M
Sbjct: 85 NFGDFLTVM 93
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 1 MADALT-EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEH------PRKE-EVQE 52
MA LT +++ E + F IDK+ DG + ++L E P+ E EV
Sbjct: 52 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 111
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112
++ DFD NG ID+ EF+T+ + ++L+ AF+ FD+D +G IS EL +V
Sbjct: 112 ILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV--- 168
Query: 113 LG-ERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
G + L + ++MI D + DG V FEEF +M+
Sbjct: 169 FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 203
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
+ + AF D+D +G I++ +LA+V +H + +EMIS +D + +G +DF EF
Sbjct: 144 KLESAFQKFDQDGNGKISVDELASVFGL---DHLESKTWKEMISGIDSNNDGDVDFEEFC 200
Query: 72 TIMGRKMKEN 81
++ + N
Sbjct: 201 KMIQKLCSNN 210
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLS-------DEETEQMIREADLDGD 134
++EL + F+ D++ DG + EL + L GE ++ + E + ++ AD D +
Sbjct: 62 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRN 121
Query: 135 GLVSFEEFARMMM 147
G + + EF + M
Sbjct: 122 GYIDYSEFVTVAM 134
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
ELKEAF+V D+++ G I LR ++ +LG+ L+++E E MI E D DG G V +EEF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 145 MMMA 148
+MM+
Sbjct: 68 LMMS 71
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF ++DK+ G+I + L +++S DE ++E++ MI+E D DG+G++D+ EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELT-EDEIENMIAETDTDGSGTVDYEEFK 66
Query: 72 TIM 74
+M
Sbjct: 67 CLM 69
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 1 MADALT-EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEH------PRKE-EVQE 52
MA LT +++ E + F IDK+ DG + ++L E P+ E EV
Sbjct: 335 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 394
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112
++ DFD NG ID+ EF+T+ + ++L+ AF+ FD+D +G IS EL +V
Sbjct: 395 ILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV--- 451
Query: 113 LG-ERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
G + L + ++MI D + DG V FEEF +M+
Sbjct: 452 FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 486
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
+ + AF D+D +G I++ +LA+V +H + +EMIS +D + +G +DF EF
Sbjct: 427 KLESAFQKFDQDGNGKISVDELASVFGL---DHLESKTWKEMISGIDSNNDGDVDFEEFC 483
Query: 72 TIMGRKMKEN 81
++ + N
Sbjct: 484 KMIQKLCSNN 493
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLS-------DEETEQMIREADLDGD 134
++EL + F+ D++ DG + EL + L GE ++ + E + ++ AD D +
Sbjct: 345 TKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRN 404
Query: 135 GLVSFEEFARMMM 147
G + + EF + M
Sbjct: 405 GYIDYSEFVTVAM 417
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
+ QI +F+EAF +ID++ DG+I DL + + + EE+ MI E +G I+
Sbjct: 8 QTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPIN 63
Query: 67 FLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQM 125
F FLT+ G K+K E+ + AFKV D D G I + L ++ +R + EE + M
Sbjct: 64 FTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNM 123
Query: 126 IREADLDGDGLVSFEEFARMM 146
D G V ++ ++
Sbjct: 124 WAAFPPDVAGNVDYKNICYVI 144
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAFCMIDKDS-DGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + +D+ DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRML-GQNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF EFL +M R MK++
Sbjct: 71 TVDFDEFLVMMVRCMKDD 88
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +D +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLSDEETEQMIREADLDGDGLVSFEEF 142
+EL++AF+ FD + DG IS +ELR M L G ++ + E++IR+ DL+GDG V FEEF
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 143 ARMM 146
RMM
Sbjct: 67 VRMM 70
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLE 69
+ E ++AF D + DG I+ +L ++ +++E+I +VD +G+G +DF E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 70 FLTIMGR 76
F+ +M R
Sbjct: 66 FVRMMSR 72
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAFCMIDKDS-DGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LT++Q EF+ AF + +D+ DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF EFL +M R MK++
Sbjct: 71 TVDFDEFLVMMVRCMKDD 88
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 ELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
E K AF +F +D +DG IS EL VM LG+ + EE ++MI E D DG G V F+EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 RMMM 147
MM+
Sbjct: 79 VMMV 82
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRML-GQNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF EFL +M R MK++
Sbjct: 71 TVDFDEFLVMMVRCMKDD 88
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F + +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD--GNGSIDFLE 69
+F+EAF + D+ D IT + + + A ++P E+ +++ + +I F E
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIAR-ALGQNPTNAEINKILGNPSKEEMNAAAITFEE 65
Query: 70 FLTIM---GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMI 126
FL ++ + E+ E +VFD++ +G + AELR+V+ LGE++++EE E+++
Sbjct: 66 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM 125
Query: 127 READLDGDGLVSFEEFARMMMA 148
+ + D +G +++E F + +M+
Sbjct: 126 KGQE-DSNGCINYEAFVKHIMS 146
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLD--GDGLVSF 139
+++ KEAF +FDR D I+A+++ ++ LG+ ++ E +++ + ++F
Sbjct: 4 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 63
Query: 140 EEFARMMMA 148
EEF M+ A
Sbjct: 64 EEFLPMLQA 72
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L + QI E +EAF MID D DG ++ +D+ I P +E+ M+ E G
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIK-AISEQLGRAPDDKELTAMLKEAP----GP 55
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
++F FL+I K+ SEE ++ AF +FD + ++ +++++ N+G+ + +E
Sbjct: 56 LNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 115
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
+EA ++G G + +F M+
Sbjct: 116 MTFKEAPVEG-GKFDYVKFTAMI 137
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD--GNGSIDFLE 69
+F+EAF + D+ D IT + + + A ++P E+ +++ + +I F E
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIAR-ALGQNPTNAEINKILGNPSKEEMNAAAITFEE 67
Query: 70 FLTIM---GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMI 126
FL ++ + E+ E +VFD++ +G + AELR+V+ LGE++++EE E+++
Sbjct: 68 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM 127
Query: 127 READLDGDGLVSFEEFARMMMA 148
+ + D +G +++E F + +M+
Sbjct: 128 KGQE-DSNGCINYEAFVKHIMS 148
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLD--GDGLVSF 139
+++ KEAF +FDR D I+A+++ ++ LG+ ++ E +++ + ++F
Sbjct: 6 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 65
Query: 140 EEFARMMMA 148
EEF M+ A
Sbjct: 66 EEFLPMLQA 74
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF EFL +M R MK++
Sbjct: 71 TVDFDEFLVMMVRSMKDD 88
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L + QI E +EAF MID D DG ++ +D+ + + P +E+ M+ E G
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQL-GRAPDDKELTAMLKEAP----GP 55
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
++F FL+I K+ SEE ++ AF +FD + ++ +++++ N+G+ + +E
Sbjct: 56 LNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 115
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
+EA ++G G + +F M+
Sbjct: 116 MTFKEAPVEG-GKFDYVKFTAMI 137
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L + QI E +EAF MID D DG ++ +D+ I P +E+ M+ E G
Sbjct: 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDI-KAISEQLGRAPDDKELTAMLKEAP----GP 66
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
++F FL+I K+ SEE ++ AF +FD + ++ +++++ N+G+ + +E
Sbjct: 67 LNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMR 126
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
+EA ++G G + +F M+
Sbjct: 127 MTFKEAPVEG-GKFDYVKFTAMI 148
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 77 KMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREA 129
K+ + +E+KEAF + D D+DGF+S +++ + LG D+E M++EA
Sbjct: 11 KLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA 63
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF EFL +M R MK++
Sbjct: 71 TVDFDEFLVMMVRSMKDD 88
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF EFL +M R MK++
Sbjct: 71 TVDFDEFLVMMVRSMKDD 88
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF E+L +M R MK++
Sbjct: 71 TVDFDEWLVMMARCMKDD 88
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMM 146
V F+E+ MM
Sbjct: 71 TVDFDEWLVMM 81
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L + QI E +EAF MID++ DG I + DL + S+ P +E+ M+ E G
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMF-SSLGRTPDDKELTAMLKEAP----GP 67
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
++F FL+I K+ SEE ++ AF +FD ++ +++++ N+G+ + +E
Sbjct: 68 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 127
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
+EA ++G G + F M+
Sbjct: 128 MTFKEAPVEG-GKFDYVRFVAMI 149
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 77 KMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREA 129
K+ + +E+KEAF + D+++DGFI +L+ + +LG D+E M++EA
Sbjct: 12 KLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA 64
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF EFL +M R MK++
Sbjct: 71 TVDFDEFLVMMVRCMKDD 88
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+EF MM+
Sbjct: 71 TVDFDEFLVMMV 82
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 46 RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAE 105
+ +++ + IS F G+ D+ F ++G K K + ++KE F++ D+DQ GFI E
Sbjct: 7 KADDINKAISA--FKDPGTFDYKRFFHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEE 62
Query: 106 LRNVMMNL---GERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
L+ V+ G L+D ET+ ++ D D DG + +EFA+M+
Sbjct: 63 LKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMV 106
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 11 AEFQEAFCMIDKDSDGLITMKDLATVIQ--SAQDEHPRKEEVQEMISEVDFDGNGSIDFL 68
A+ +E F ++DKD G I ++L V++ SA E + +++ D D +G I
Sbjct: 41 AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGAD 100
Query: 69 EFLTIMGR 76
EF ++ +
Sbjct: 101 EFAKMVAQ 108
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQ----------SAQDEHPRKEEVQEMIS 55
T ++ E + F +D + DG + K+L + S D + EV ++
Sbjct: 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 94
Query: 56 EVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE 115
VDFD NG I++ EF+T+ K E L AF+ FD D G I+ EL + + E
Sbjct: 95 SVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL-GRLFGVTE 153
Query: 116 RLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+ DE Q+++E D + DG V FEEF MM
Sbjct: 154 -VDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 83 SEELKEAFKVFDRDQDGFISAAEL----RNVMMNLGERLSD-------EETEQMIREADL 131
++EL + F+ D + DG + EL R +M G+ +SD E + +++ D
Sbjct: 39 TKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDF 98
Query: 132 DGDGLVSFEEFARMMM 147
D +G + + EF + M
Sbjct: 99 DRNGYIEYSEFVTVCM 114
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQ----------SAQDEHPRKEEVQEMIS 55
T ++ E + F +D + DG + K+L + S D + EV ++
Sbjct: 309 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 368
Query: 56 EVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE 115
VDFD NG I++ EF+T+ K E L AF+ FD D G I+ EL + + E
Sbjct: 369 SVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGR-LFGVTE 427
Query: 116 RLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+ DE Q+++E D + DG V FEEF MM
Sbjct: 428 -VDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 83 SEELKEAFKVFDRDQDGFISAAEL----RNVMMNLGERLSD-------EETEQMIREADL 131
++EL + F+ D + DG + EL R +M G+ +SD E + +++ D
Sbjct: 313 TKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDF 372
Query: 132 DGDGLVSFEEFARMMM 147
D +G + + EF + M
Sbjct: 373 DRNGYIEYSEFVTVCM 388
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
F +DKD G+I+ +L + + V+ +IS D + ++F EF +
Sbjct: 30 NVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW 89
Query: 75 GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD 134
+ + F+ +DRD G I EL+ + G RLSD+ + +IR+ D G
Sbjct: 90 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 143
Query: 135 GLVSFEEF 142
G ++F++F
Sbjct: 144 GQIAFDDF 151
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQE-MISEVDFDGNGSIDFL 68
I ++Q F D+D+ G+I +L + + ++ + +I + D G G I F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFD 149
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
+F+ V + L + F+ +D DQDG+I +
Sbjct: 150 DFI------QGCIVLQRLTDIFRRYDTDQDGWIQVS 179
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
F +DKD G+I+ +L + + V+ +IS D + ++F EF +
Sbjct: 29 NVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW 88
Query: 75 GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD 134
+ + F+ +DRD G I EL+ + G RLSD+ + +IR+ D G
Sbjct: 89 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 142
Query: 135 GLVSFEEF 142
G ++F++F
Sbjct: 143 GQIAFDDF 150
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQE-MISEVDFDGNGSIDFL 68
I ++Q F D+D+ G+I +L + + ++ + +I + D G G I F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFD 148
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
+F+ V + L + F+ +D DQDG+I +
Sbjct: 149 DFI------QGCIVLQRLTDIFRRYDTDQDGWIQVS 178
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 14/152 (9%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
TE +I E+ + F + G ++M++ + + + + + D +G+G+
Sbjct: 22 FTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGT 79
Query: 65 IDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLS------ 118
IDF EF+ + + + ++LK AF ++D D +G+IS AE+ ++ + + +S
Sbjct: 80 IDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMP 139
Query: 119 ------DEETEQMIREADLDGDGLVSFEEFAR 144
++ TE++ R+ D + DG +S EEF R
Sbjct: 140 EDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
F +DKD G+I+ +L + + V+ +IS D + ++F EF +
Sbjct: 11 NVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW 70
Query: 75 GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD 134
+ + F+ +DRD G I EL+ + G RLSD+ + +IR+ D G
Sbjct: 71 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 124
Query: 135 GLVSFEEF 142
G ++F++F
Sbjct: 125 GQIAFDDF 132
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQE-MISEVDFDGNGSIDFL 68
I ++Q F D+D+ G+I +L + + ++ + +I + D G G I F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFD 130
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
+F+ V + L + F+ +D DQDG+I +
Sbjct: 131 DFI------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V++ ++P EE+QEMI EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF E+L +M R MK++
Sbjct: 71 TVDFDEWLVMMVRCMKDD 88
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL VM LG+ + EE ++MI E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 136 LVSFEEFARMMM 147
V F+E+ MM+
Sbjct: 71 TVDFDEWLVMMV 82
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
F +DKD G+I+ +L + + V+ +IS D + ++F EF +
Sbjct: 8 NVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW 67
Query: 75 GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD 134
+ + F+ +DRD G I EL+ + G RLSD+ + +IR+ D G
Sbjct: 68 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 121
Query: 135 GLVSFEEF 142
G ++F++F
Sbjct: 122 GQIAFDDF 129
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQE-MISEVDFDGNGSIDFL 68
I ++Q F D+D+ G+I +L + + ++ + +I + D G G I F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFD 127
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
+F+ V + L + F+ +D DQDG+I +
Sbjct: 128 DFI------QGCIVLQRLTDIFRRYDTDQDGWIQVS 157
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 7/139 (5%)
Query: 9 QIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFL 68
QI E +EAF MID D DG ++ +D+ I P +E+ M+ E G ++F
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIK-AISEQLGRAPDDKELTAMLKEAP----GPLNFT 56
Query: 69 EFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIR 127
FL+I K+ SEE ++ AF +FD + ++ +++++ N+G+ + +E +
Sbjct: 57 MFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFK 116
Query: 128 EADLDGDGLVSFEEFARMM 146
EA ++G G + +F M+
Sbjct: 117 EAPVEG-GKFDYVKFTAMI 134
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 7/142 (4%)
Query: 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
+ QI E +EAF MID D DG ++ +D+ I P +E+ M+ E G +
Sbjct: 1 PQKQIQEMKEAFSMIDVDRDGFVSKEDIK-AISEQLGRAPDDKELTAMLKEAP----GPL 55
Query: 66 DFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQ 124
+F FL+I K+ SEE ++ AF +FD + ++ +++++ N+G+ + +E
Sbjct: 56 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 115
Query: 125 MIREADLDGDGLVSFEEFARMM 146
+EA ++G G + +F M+
Sbjct: 116 TFKEAPVEG-GKFDYVKFTAMI 136
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
F +DKD G+I+ +L + + V+ +IS D + ++F EF +
Sbjct: 7 NVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW 66
Query: 75 GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD 134
+ + F+ +DRD G I EL+ + G RLSD+ + +IR+ D G
Sbjct: 67 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 120
Query: 135 GLVSFEEF 142
G ++F++F
Sbjct: 121 GQIAFDDF 128
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQE-MISEVDFDGNGSIDFL 68
I ++Q F D+D+ G+I +L + + ++ + +I + D G G I F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFD 126
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
+F+ V + L + F+ +D DQDG+I +
Sbjct: 127 DFI------QGCIVLQRLTDIFRRYDTDQDGWIQVS 156
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
F +DKD G+I+ +L + + V+ +IS D + ++F EF +
Sbjct: 11 NVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW 70
Query: 75 GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD 134
+ + F+ +DRD G I EL+ + G RLSD+ + +IR+ D G
Sbjct: 71 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGR 124
Query: 135 GLVSFEEF 142
G ++F++F
Sbjct: 125 GQIAFDDF 132
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQE-MISEVDFDGNGSIDFL 68
I ++Q F D+D+ G+I +L + A + ++ + +I + D G G I F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGA--GYRLSDQFHDILIRKFDRQGRGQIAFD 130
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
+F+ V + L + F+ +D DQDG+I +
Sbjct: 131 DFI------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 50 VQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNV 109
V++M DF+ +G IDF+E++ + +K V ++L+ FK++D D +G I EL N+
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNI 113
Query: 110 MMNL------GERLSDEETEQMI-READLDGDGLVSFEEF 142
+ + E ++ EE M+ + D++GDG +S EEF
Sbjct: 114 IKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 62 NGSIDFLEFLTIMGRK-MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
+G + EF G K + + ++ +++ F+ FD ++DG+I E + + + D+
Sbjct: 29 SGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQ 88
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
+ + D+DG+G + E ++ A
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKA 116
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
+EL+EAF+++D++ +G+IS +R ++ L E LS E+ + MI E D DG G V FEEF
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 144 RMMMA 148
+M
Sbjct: 63 GVMTG 67
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF + DK+ +G I+ D+ I + DE E++ MI E+D DG+G++DF EF+
Sbjct: 4 ELREAFRLYDKEGNGYIS-TDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 72 TIM 74
+M
Sbjct: 63 GVM 65
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 1 MADALTE-DQIAEFQEAFCMIDKDSDGLITMKDLA---------------TVIQSAQDEH 44
MA LT D+ + E F +D ++DG++ +L ++IQ+ +
Sbjct: 320 MASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQN--EGS 377
Query: 45 PRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
++++ ++ +D DG+GSI++ EF+ + E ++ AFK+FD+D G IS
Sbjct: 378 TIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTK 437
Query: 105 ELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
EL + + EE E +I + D + DG V F EF M+ F
Sbjct: 438 ELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E +EAF MID++ DG I + DL S+ P +E+ M+ E G ++F FL
Sbjct: 3 EMKEAFTMIDQNRDGFIDINDLKEEF-SSLGRTPDDKELTAMLKEAP----GPLNFTMFL 57
Query: 72 TIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREAD 130
+I K+ SEE ++ AF +FD D ++ +++++ N+G+ + +E +EA
Sbjct: 58 SIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 117
Query: 131 LDGDGLVSFEEFARMM 146
++G G + F M+
Sbjct: 118 VEG-GKFDYVRFVAMI 132
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREA 129
+E+KEAF + D+++DGFI +L+ +LG D+E M++EA
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEA 47
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 5 LTEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
LT+D+I E +E F + D DG + + +++ +P + +V + G
Sbjct: 3 LTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLG-MNPTEAQVHQHGGTKKM-GE 60
Query: 63 GSIDFLEFLTI---MGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119
+ E L I M K ++E EAFK FDR+ G IS+AE+RNV+ LGER+++
Sbjct: 61 KAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITE 120
Query: 120 EETEQMIREADL--DGDGLVSFEEFARMMMA 148
++ + D+ D DG + +E+ + +MA
Sbjct: 121 DQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 17 FCMIDKDSDGLITMKDLATVIQSAQDEHPRKEE--VQEMISEVDFDGNGSIDFLEFLTIM 74
F +D + DG ++ +++ + S + P K E +Q + +D DGNG ID EF
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSS---KRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 75 GRKMKENVSEE---LKEAFKVFDRDQDGFISAAELRNVMMNLG-ERLSDEETEQMIREAD 130
++++S+E LK +K+ D D DG ++ E+ G E++ D+ I +AD
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ-----IMKAD 117
Query: 131 LDGDGLVSFEEF 142
+GDG ++ EEF
Sbjct: 118 ANGDGYITLEEF 129
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112
+ ++D +G+GS+ + E + K + L+ FK D D +G I AE
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 113 LGER-LSDEET--EQMIREADLDGDGLVSFEEFARMMMAF 149
+ E+ LSDE+ + + + D DGDG ++ EE F
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKF 104
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L + + E +EAF MID++ DG I + DL + S+ P +E+ M+ E G
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMF-SSLGRTPDDKELTAMLKEAP----GP 71
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
++F FL+I K+ SEE ++ AF +FD ++ +++++ N+G+ + +E
Sbjct: 72 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 131
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
+EA ++G G + F M+
Sbjct: 132 MTFKEAPVEG-GKFDYVRFVAMI 153
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 77 KMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREA 129
++ + + +E+KEAF + D+++DGFI +L+ + +LG D+E M++EA
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA 68
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L + + E +EAF MID++ DG I + DL + S+ P +E+ M+ E G
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMF-SSLGRTPDDKELTAMLKEAP----GP 71
Query: 65 IDFLEFLTIMGRKMKENVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
++F FL+I K+ SEE ++ AF +FD ++ +++++ N+G+ + +E
Sbjct: 72 LNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMR 131
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
+EA ++G G + F M+
Sbjct: 132 MTFKEAPVEG-GKFDYVRFVAMI 153
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 77 KMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREA 129
++ + + +E+KEAF + D+++DGFI +L+ + +LG D+E M++EA
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA 68
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQ--SAQDEHPRKEEVQEMISEVD 58
+A L + +I + F +D D+ G ++ +++ ++ Q P ++ +++ ++D
Sbjct: 47 IAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPP---DIHQVLRDID 103
Query: 59 FDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMM--NLGER 116
+ +G I + +FL K E FK FD D +G IS EL+ + ++
Sbjct: 104 SNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENP 163
Query: 117 LSDEETEQMIREADLDGDGLVSFEEFARMM 146
L D+ + +++E DL+GDG + F EF MM
Sbjct: 164 LIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 4 ALTEDQIAEFQEAFCMI-----DKDSDGLITMKDLATVIQSAQDEHPRKEE-VQEMISEV 57
A T D+ ++ C+I D D +G I++++L + E+P ++ + ++ EV
Sbjct: 117 AATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEV 176
Query: 58 DFDGNGSIDFLEFLTIMGRK 77
D +G+G IDF EF+ +M +K
Sbjct: 177 DLNGDGEIDFHEFMLMMSKK 196
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 26 GLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEE 85
GL T+ + T++ + + ++ + D + +G +DFLEF+ + M+E + ++
Sbjct: 35 GLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQK 94
Query: 86 LKEAFKVFDRDQDGFISAAELRNVMM-----NLGERLSDEETEQMI-READLDGDGLVSF 139
LK FK++D D +G I EL ++ M N + LS EE ++ + D++ DG ++
Sbjct: 95 LKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTL 154
Query: 140 EEFARMM 146
EEF M
Sbjct: 155 EEFINGM 161
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 69 EFLTIMG-RKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIR 127
EF T++G + + + ++ + + + FD ++DGF+ E + + + +++ + +
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 128 EADLDGDGLVSFEEFARMMMA 148
D DG+G + E M MA
Sbjct: 101 LYDADGNGSIDKNELLDMFMA 121
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EEL F++FD++ DGFI EL ++ GE + +E+ E +++++D + DG + F+EF
Sbjct: 10 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 69
Query: 144 RMM 146
+MM
Sbjct: 70 KMM 72
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E F + DK++DG I +++L +++ A EH +E++++++ + D + +G IDF EFL
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILR-ATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 69
Query: 72 TIM 74
+M
Sbjct: 70 KMM 72
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
F +DKD G+I+ +L + + V+ +IS D + ++F EF +
Sbjct: 8 NVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW 67
Query: 75 GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD 134
+ + F+ +DRD G I EL+ + G RLSD+ + +IR+ D G
Sbjct: 68 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGR 119
Query: 135 GLVSFEEF 142
G ++F++F
Sbjct: 120 GQIAFDDF 127
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQE-MISEVDFDGNGSIDFL 68
I ++Q F D+D+ G+I +L + A + ++ + +I + D G G I F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNEL----KQALSGYRLSDQFHDILIRKFDRQGRGQIAFD 125
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAA 104
+F+ V + L + F+ +D DQDG+I +
Sbjct: 126 DFI------QGCIVLQRLTDIFRRYDTDQDGWIQVS 155
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EE+ +AF++FD D G I+ +LR V LGE L++EE ++MI EAD + D + +EF
Sbjct: 9 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFI 68
Query: 144 RMM 146
R+M
Sbjct: 69 RIM 71
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDF 67
D E +AF + D D+ G IT+KDL V + E+ +EE+QEMI+E D + + ID
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQEMIAEADRNDDNEIDE 64
Query: 68 LEFLTIMGR 76
EF+ IM +
Sbjct: 65 DEFIRIMKK 73
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
LT ++ E++EAF + DKD+D +T ++L TV++ A +P K+++ E++ + D D +G
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMR-ALGANPTKQKISEIVKDYDKDNSGK 66
Query: 65 IDFLEFLTIM 74
D FLTIM
Sbjct: 67 FDQETFLTIM 76
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
+E KEAF++FD+D D ++A EL VM LG + ++ +++++ D D G E F
Sbjct: 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFL 73
Query: 144 RMMMAF 149
+M+ +
Sbjct: 74 TIMLEY 79
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 5 LTEDQIAEFQEAF-CMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
LTE+Q EF+ AF + DG I+ K+L V + ++P EE+QE I EVD DG+G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLG-QNPTPEELQEXIDEVDEDGSG 70
Query: 64 SIDFLEFLTIMGRKMKEN 81
++DF EFL R K++
Sbjct: 71 TVDFDEFLVXXVRCXKDD 88
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 77 KMKENVSEELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
++ E E K AF +F +DG IS EL V LG+ + EE ++ I E D DG G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSG 70
Query: 136 LVSFEEF 142
V F+EF
Sbjct: 71 TVDFDEF 77
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELR 107
E++++ I F S D +F ++G +K+ ++++K+ F + D+D+DGFI EL
Sbjct: 9 EDIKKAIGA--FTAADSFDHKKFFQMVG--LKKKSADDVKKVFHILDKDKDGFIDEDELG 64
Query: 108 NVMMNL---GERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+++ LS +ET+ ++ D DGDG + EEF+ ++
Sbjct: 65 SILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 14 QEAFCMIDKDSDGLITMKDLATVIQ--SAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
++ F ++DKD DG I +L ++++ S+ +E + +++ D DG+G I EF
Sbjct: 44 KKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 72 TIM 74
T++
Sbjct: 104 TLV 106
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 63 GSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLSD 119
GS + +F ++G +K + ++K+ FK D D GFI EL+ V+ + G L+D
Sbjct: 23 GSFNHKKFFALVG--LKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTD 80
Query: 120 EETEQMIREADLDGDGLVSFEEFARMM 146
ET+ ++ AD DGDG + +EF ++
Sbjct: 81 AETKAFLKAADKDGDGKIGIDEFETLV 107
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL--GER-LSDEETEQM 125
+F I G M + S +LKE F++ D DQ GFI EL+ + G R L+ ET+
Sbjct: 28 KFFQISG--MSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTF 85
Query: 126 IREADLDGDGLVSFEEFARMMMA 148
+ AD DGDG + EEF M+ +
Sbjct: 86 LAAADHDGDGKIGAEEFQEMVQS 108
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 74/136 (54%), Gaps = 8/136 (5%)
Query: 14 QEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMI---SEVDFDGNGSIDFLEF 70
++ F + DK G I L ++ A +P + VQ++I S + + ++D +
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLR-AIGYNPTNQLVQDIINADSSLRDASSLTLDQITG 65
Query: 71 LTIMGRK----MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMI 126
L + K + +E+ +AF+VFD++ G +S +LR ++ LGE+L+D E ++++
Sbjct: 66 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 125
Query: 127 READLDGDGLVSFEEF 142
+ ++D +G + +++F
Sbjct: 126 KGVEVDSNGEIDYKKF 141
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN 62
DA T+ + +F +AF + DK+S G +++ DL ++ + E EV E++ V+ D N
Sbjct: 75 DATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYML-TGLGEKLTDAEVDELLKGVEVDSN 133
Query: 63 GSIDFLEFL 71
G ID+ +F+
Sbjct: 134 GEIDYKKFI 142
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER---LSDEETEQM 125
EF +G + +++K+AF V D+D+ GFI EL+ + N L+D ET+
Sbjct: 28 EFFAKVG--LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF 85
Query: 126 IREADLDGDGLVSFEEFARMMMA 148
+ + D DGDG++ +EFA M+ A
Sbjct: 86 LADGDKDGDGMIGVDEFAAMIKA 108
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQ--SAQDEHPRKEEVQEMISEVDFDG 61
L + + ++AF +ID+D G I +L +Q S E + +++ D DG
Sbjct: 34 GLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDG 93
Query: 62 NGSIDFLEFLTIM 74
+G I EF ++
Sbjct: 94 DGMIGVDEFAAMI 106
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
MK EEL + F++FD++ DG+I EL+ ++ GE +++++ E+++++ D + DG +
Sbjct: 1 MKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 60
Query: 138 SFEEFARMM 146
++EF M
Sbjct: 61 DYDEFLEFM 69
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E + F M DK++DG I +++L ++Q A E +++++E++ + D + +G ID+ EFL
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
Query: 72 TIM 74
M
Sbjct: 67 EFM 69
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142
E + FK FD + DG ISAAEL + LG ++ +E + M+ E D DGDG +SF+EF
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEF 66
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
AD +D+ AE + F D + DG I+ +L +++ P +EV+ M++E+D DG
Sbjct: 1 ADDHPQDK-AERERIFKRFDANGDGKISAAELGEALKTLGSITP--DEVKHMMAEIDTDG 57
Query: 62 NGSIDFLEFLTIMGRKMKENVSEELKEAFKVF 93
+G I F EF T GR + LK+ K+F
Sbjct: 58 DGFISFQEF-TDFGRANR----GLLKDVAKIF 84
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 42 DEHPR-KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGF 100
D+HP+ K E + + D +G+G I E + + + +E+K D D DGF
Sbjct: 2 DDHPQDKAERERIFKRFDANGDGKISAAELGEAL-KTLGSITPDEVKHMMAEIDTDGDGF 60
Query: 101 ISAAEL 106
IS E
Sbjct: 61 ISFQEF 66
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 9 QIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFL 68
Q+ E+ + F +++ G + M + + +E + V+ M D +G+ +IDFL
Sbjct: 23 QLQEWYKKF--LEECPSGTLFMHEFKRFFKVPDNEEA-TQYVEAMFRAFDTNGDNTIDFL 79
Query: 69 EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL--------------- 113
E++ + ++ + +LK FK++D+D++G I EL +++ ++
Sbjct: 80 EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 139
Query: 114 -GERLSDEE-TEQMIREADLDGDGLVSFEEFA 143
G+ L+ EE +++ D +GDG +S EF
Sbjct: 140 QGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER-LSDEETEQMIREADLDGDGL 136
++++ EE+ AFKVFD + DG I E + +M +GE L+D E E+ ++EAD DG+G+
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 137 VSFEEFARMM 146
+ EF ++
Sbjct: 62 IDIPEFMDLI 71
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E AF + D + DG+I + ++Q +E EV+E + E D DGNG ID EF+
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 72 TIMGR 76
++ +
Sbjct: 69 DLIKK 73
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 43/60 (71%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142
+E+ +AF+VFD++ G +S +LR ++ LGE+L+D E +++++ ++D +G + +++F
Sbjct: 4 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
A TED F +AF + DK+S G +++ DL ++ + E EV E++ V+ D NG
Sbjct: 2 AKTED----FVKAFQVFDKESTGKVSVGDLRYML-TGLGEKLTDAEVDELLKGVEVDSNG 56
Query: 64 SIDFLEFL 71
ID+ +F+
Sbjct: 57 EIDYKKFI 64
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
++ + I E F +D + +G ++ +++ TV+ S +K ++ ++ +D + G
Sbjct: 32 SVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG---IKKWDINRILQALDINDRG 88
Query: 64 SIDFLEFLTIMGRKMKENV-SEELKEAFKVFDRDQDGFISAAEL 106
+I + EF+ G +N+ S LK AF D+D+DG+IS +++
Sbjct: 89 NITYTEFMA--GCYRWKNIESTFLKAAFNKIDKDEDGYISKSDI 130
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 13 FQEAFCMIDKDSDGLITMKDLATVIQ 38
+ AF IDKD DG I+ D+ +++
Sbjct: 110 LKAAFNKIDKDEDGYISKSDIVSLVH 135
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112
+ + D DGNG+I F +F+ + ++ V E+LK AF ++D ++DG I+ E+ +M +
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193
Query: 113 ------------LGERLSDEETEQMIREADLDGDGLVSFEEF 142
L E E E+ ++ D + DG+V+ +EF
Sbjct: 194 IYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 44/68 (64%)
Query: 79 KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVS 138
K EEL + F++FD++ DG+I EL+ ++ GE +++++ E+++++ D + DG +
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 139 FEEFARMM 146
++EF M
Sbjct: 70 YDEFLEFM 77
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E + F M DK++DG I +++L ++Q A E +++++E++ + D + +G ID+ EFL
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
Query: 72 TIM 74
M
Sbjct: 75 EFM 77
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 17 FCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGR 76
F ID + DG ++ +++ + S + ++ +Q + +D DGNG ID EF G
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFV-SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 77 KMKENVSEE---LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDG 133
+++S++ LK +K+ D D DG ++ E+ + G E+ + + +AD +G
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANG 120
Query: 134 DGLVSFEEF 142
DG ++ EEF
Sbjct: 121 DGYITLEEF 129
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112
+ E+D +G+G++ + E + +K + L+ FK D D +G I E +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 113 L-GERLSDEET--EQMIREADLDGDGLVSFEE 141
+ G+ LSD++ + + + D+DGDG ++ EE
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L++D+I + + ++D D DG +T +++ + + +H E+V E + + D +G+G
Sbjct: 70 LSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFK----KHGI-EKVAEQVMKADANGDGY 123
Query: 65 IDFLEFL 71
I EFL
Sbjct: 124 ITLEEFL 130
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 44/68 (64%)
Query: 79 KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVS 138
K EEL + F++FD++ DG+I EL+ ++ GE +++++ E+++++ D + DG +
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 139 FEEFARMM 146
++EF M
Sbjct: 65 YDEFLEFM 72
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E + F M DK++DG I +++L ++Q A E +++++E++ + D + +G ID+ EFL
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Query: 72 TIM 74
M
Sbjct: 70 EFM 72
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELR 107
E++++ I F S D +F ++G +K+ ++++K+ F + D+D+ GFI EL
Sbjct: 9 EDIKKAIGA--FTAADSFDHKKFFQMVG--LKKKSADDVKKVFHILDKDKSGFIEEDELG 64
Query: 108 NVMMNLGE---RLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+++ LS +ET+ ++ D DGDG + EEF+ ++
Sbjct: 65 SILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 17 FCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGR 76
F ID + DG ++ +++ + S + ++ +Q + +D DGNG ID EF G
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFV-SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 77 KMKENVSEE---LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDG 133
+++S++ LK +K+ D D DG ++ E+ + G E+ + + +AD +G
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANG 120
Query: 134 DGLVSFEEF 142
DG ++ EEF
Sbjct: 121 DGYITLEEF 129
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112
+ E+D +G+G++ + E + +K + L+ FK D D +G I E +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 113 L-GERLSDEET--EQMIREADLDGDGLVSFEE 141
+ G+ LSD++ + + + D+DGDG ++ EE
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L++D+I + + ++D D DG +T +++ + + +H E+V E + + D +G+G
Sbjct: 70 LSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFK----KHGI-EKVAEQVMKADANGDGY 123
Query: 65 IDFLEFL 71
I EFL
Sbjct: 124 ITLEEFL 130
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELR 107
E++++ I F S D +F ++G +K+ ++++K+ F + D+D+ GFI EL
Sbjct: 9 EDIKKAIGA--FTAADSFDHKKFFQMVG--LKKKSADDVKKVFHILDKDKSGFIEEDELG 64
Query: 108 NVMMNL---GERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+++ LS +ET+ ++ D DGDG + EEF+ ++
Sbjct: 65 SILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLV 106
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 45/71 (63%)
Query: 76 RKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
R ++ EEL+EAF+ FD+D+DG+I+ +L N M +G ++ E ++ ++ +++ G
Sbjct: 2 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGG 61
Query: 136 LVSFEEFARMM 146
V F++F +M
Sbjct: 62 HVDFDDFVELM 72
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
+L ++I E +EAF DKD DG I +DL +++ P + E+ E+ +++ + G
Sbjct: 3 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTM-GYMPTEMELIELSQQINMNLGG 61
Query: 64 SIDFLEFLTIMGRKM 78
+DF +F+ +MG K+
Sbjct: 62 HVDFDDFVELMGPKL 76
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 43/63 (68%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EEL + F++FD++ DG+I EL+ ++ GE +++++ E+++++ D + DG + ++EF
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Query: 144 RMM 146
M
Sbjct: 65 EFM 67
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E + F M DK++DG I +++L ++Q A E +++++E++ + D + +G ID+ EFL
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Query: 72 TIM 74
M
Sbjct: 65 EFM 67
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
+ QI F +DK +G ++ +D + + A + P + + I+ +G
Sbjct: 22 GFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN--PLGDRI---INAFFSEGED 76
Query: 64 SIDFLEFLTIMG--RKMKEN--------------VSEELKEAFKVFDRDQDGFISAAELR 107
++F F+ + R +++N S +L AF+++D D+D IS EL
Sbjct: 77 QVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELL 136
Query: 108 NVM-MNLGERLSDEE----TEQMIREADLDGDGLVSFEEFARMM 146
V+ M +G +SDE+ ++ I+EAD DGD +SF EF +++
Sbjct: 137 QVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 43/63 (68%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EEL + F++FD++ DG+I EL+ ++ GE +++++ E+++++ D + DG + ++EF
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
Query: 144 RMM 146
M
Sbjct: 66 EFM 68
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E + F M DK++DG I + +L ++Q A E +++++E++ + D + +G ID+ EFL
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
Query: 72 TIM 74
M
Sbjct: 66 EFM 68
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
++ + F +D++ G ++ DL + A +P + + E DG+
Sbjct: 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI--GALAVNPLGDRIIESFFP---DGSQ 76
Query: 64 SIDFLEFLTIMGR--------------KMKENVSE---ELKEAFKVFDRDQDGFISAAEL 106
+DF F+ ++ K E ++ +L AF+++D D+DG IS E+
Sbjct: 77 RVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEM 136
Query: 107 RNVM-MNLGERLSDEETEQM----IREADLDGDGLVSFEEFARMM 146
V+ + +G ++++E+ E + ++EAD DGDG VSF EF + +
Sbjct: 137 LQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 64 SIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVM--MNLGER-LSDE 120
S ++ F +G K ++++K+AF V D+D+ GFI EL+ + + G R L+D
Sbjct: 24 SFNYKAFFAKVGLTAKS--ADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDA 81
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
ET+ ++ D DGDG + +E+A ++ A
Sbjct: 82 ETKAFLKAGDSDGDGAIGVDEWAALVKA 109
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQ--SAQDEHPRKEEVQEMISEVDFDGN 62
LT + ++AF +ID+D G I +L +Q SA E + + D DG+
Sbjct: 36 LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGD 95
Query: 63 GSIDFLEFLTIM 74
G+I E+ ++
Sbjct: 96 GAIGVDEWAALV 107
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
+ QI F +DK +G ++ +D + + A + P + + I+ +G
Sbjct: 22 GFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN--PLGDRI---INAFFPEGED 76
Query: 64 SIDFLEFLTIMG--RKMKEN--------------VSEELKEAFKVFDRDQDGFISAAELR 107
++F F+ + R +++N S +L AF+++D D+D IS EL
Sbjct: 77 QVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELL 136
Query: 108 NVM-MNLGERLSDEE----TEQMIREADLDGDGLVSFEEFARMM 146
V+ M +G +SDE+ ++ I+EAD DGD +SF EF +++
Sbjct: 137 QVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
FK FD + DG IS++EL + + LG ++ +E +M+ E D DGDG +SF+EF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFT 69
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MA T IA+ + F D + DG I+ +L +++ P +EV+ M++E+D D
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTP--DEVRRMMAEIDTD 58
Query: 61 GNGSIDFLEF 70
G+G I F EF
Sbjct: 59 GDGFISFDEF 68
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 64 SIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER---LSDE 120
S ++ F + +G + +++K+ F + D+D+ GFI EL+ + N L+
Sbjct: 23 SFNYKSFFSTVG--LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSA 80
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
ET+ + D DGDG + EEF ++ A
Sbjct: 81 ETKAFLAAGDTDGDGKIGVEEFQSLVKA 108
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 64 SIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER---LSDE 120
S ++ F + +G + +++K+ F + D+D+ GFI EL+ + N L+
Sbjct: 24 SFNYKSFFSTVG--LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSA 81
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
ET+ + D DGDG + EEF ++ A
Sbjct: 82 ETKAFLAAGDTDGDGKIGVEEFQSLVKA 109
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLSDEETEQMIREADLDGDGLVSF 139
++++K+AF + D+D+ GFI EL+ + N L+D ET+ ++ D DGDG +
Sbjct: 41 ADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGV 100
Query: 140 EEFARMMMA 148
+EF ++ A
Sbjct: 101 DEFTALVKA 109
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQS--AQDEHPRKEEVQEMISEVDFDG 61
LT + ++AF +ID+D G I +L +Q+ A E + + D DG
Sbjct: 35 GLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDG 94
Query: 62 NGSIDFLEFLTIM 74
+G I EF ++
Sbjct: 95 DGKIGVDEFTALV 107
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEE 141
++++++ FK FD + DG IS +EL + + LG +D E ++M+ E D DGDG + F E
Sbjct: 1 MADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNE 59
Query: 142 F 142
F
Sbjct: 60 F 60
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 17 FCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLT 72
F D + DG I++ +L +++ +EVQ M++E+D DG+G IDF EF++
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLG--STSADEVQRMMAEIDTDGDGFIDFNEFIS 62
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELR 107
E++++ I F S D +F ++G +K+ ++++K+ F + D+D+ GFI EL
Sbjct: 9 EDIKKAIGA--FTAADSFDHKKFFQMVG--LKKKSADDVKKVFHILDKDKSGFIEEDELG 64
Query: 108 NVMMNL---GERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+++ LS +ET+ ++ D DG G + EEF+ ++
Sbjct: 65 SILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEFSTLV 106
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142
+++++ FK FD + DG IS +EL + + LG +D E ++M+ E D DGDG + F EF
Sbjct: 1 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 59
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 17 FCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLT 72
F D + DG I++ +L +++ +EVQ M++E+D DG+G IDF EF++
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLG--STSADEVQRMMAEIDTDGDGFIDFNEFIS 61
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 51 QEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVM 110
+ + D D NG I F EF+T++ + + E+L AF+++D + DG+I+ E+ ++
Sbjct: 66 NHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIV 125
Query: 111 MNLGERLS-------DEETEQM-----IREADLDGDGLVSFEEF 142
++ + + DE T +M + D + DG ++ +EF
Sbjct: 126 ASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 17 FCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTI--- 73
F + DKD++G I ++ TV+ S +E++ D + +G I F E LTI
Sbjct: 69 FTVFDKDNNGFIHFEEFITVL-STTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 74 ----MGRKMKENVSE-----ELKEAFKVFDRDQDGFISAAELR 107
MG + N E +K+ FK+ D+++DG+I+ E R
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLSDEETEQMIREADLDGDGLVSF 139
++++K+AF + D+D+ GFI EL+ + N L+D ET+ ++ D DGDG +
Sbjct: 40 ADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGV 99
Query: 140 EEFARMMMA 148
+E+ ++ A
Sbjct: 100 DEWTALVKA 108
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQS--AQDEHPRKEEVQEMISEVDFDG 61
LT + ++AF +ID+D G I +L +Q+ A E + + D DG
Sbjct: 34 GLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDG 93
Query: 62 NGSIDFLEFLTIM 74
+G I E+ ++
Sbjct: 94 DGKIGVDEWTALV 106
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 59 FDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GE 115
F S D +F ++G +K+ ++++K+ F + D+D+ GFI EL ++
Sbjct: 19 FSATDSFDHKKFFQMVG--LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDAR 76
Query: 116 RLSDEETEQMIREADLDGDGLVSFEEFARMM 146
LS +ET+ ++ D DGDG + +EF+ ++
Sbjct: 77 DLSAKETKMLMAAGDKDGDGKIGVDEFSTLV 107
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 14 QEAFCMIDKDSDGLITMKDLATVIQ--SAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
++ F M+DKD G I +L +++ S +E + +++ D DG+G I EF
Sbjct: 45 KKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFS 104
Query: 72 TIM 74
T++
Sbjct: 105 TLV 107
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
L+E+Q E +EAF + D + G I +L ++ A +K E+ E+++E D +GNG
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMR-ALGFDVKKPEILELMNEYDREGNGY 59
Query: 65 IDFLEFLTIMGRKMK 79
I F +FL IM K+K
Sbjct: 60 IGFDDFLDIMTEKIK 74
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137
+ E +E+KEAF +FD ++ G I EL+ M LG + E +++ E D +G+G +
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 138 SFEEFARMM 146
F++F +M
Sbjct: 61 GFDDFLDIM 69
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 46 RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSE-ELKEAFKVFDRDQDGFISAA 104
+K+E++E D + GSID+ E L + R + +V + E+ E +DR+ +G+I
Sbjct: 5 QKQEIKEAFDLFDTNKTGSIDYHE-LKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 105 ELRNVM 110
+ ++M
Sbjct: 64 DFLDIM 69
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112
+ + D D NG++ F +F+ + ++ V E+L AF ++D ++DG+I+ E+ ++M
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKA 166
Query: 113 ------------LGERLSDEETEQMIREADLDGDGLVSFEEF 142
L E + E ++ D + DG+V+ +EF
Sbjct: 167 IYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 83 SEELKEAFKVF-----DRDQDGFISAAELRNVMMNLGERLSD--EETEQMIREADLDGDG 135
EE+K AF+VF D +Q IS EL+ VM LG L ++MI E D +GDG
Sbjct: 4 PEEIKGAFEVFAAKEGDPNQ---ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDG 60
Query: 136 LVSFEEFARMM 146
VSFEEF MM
Sbjct: 61 EVSFEEFLVMM 71
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 52 EMISEVDFDGNGSIDFLEFLTIMGR 76
EMI EVD +G+G + F EFL +M +
Sbjct: 49 EMIEEVDKNGDGEVSFEEFLVMMKK 73
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 64 SIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVM--MNLGER-LSDE 120
S + F G K ++++K+AF D+D+ GFI EL+ + G R L+D
Sbjct: 24 SFSYKAFFAKCGLSGKS--ADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDA 81
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
ET+ ++ D DGDG + EE+ ++ A
Sbjct: 82 ETKAFLKAGDSDGDGAIGVEEWVALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 64 SIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVM--MNLGER-LSDE 120
S + F G K ++++K+AF D+D+ GFI EL+ + G R L+D
Sbjct: 23 SFSYKAFFAKCGLSGKS--ADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDA 80
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
ET+ ++ D DGDG + EE+ ++ A
Sbjct: 81 ETKAFLKAGDSDGDGAIGVEEWVALVKA 108
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
MA+ L+E++I +E F MID D+ G IT +L ++ E + E+++++ D D
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSE-LMESEIKDLMDAADID 71
Query: 61 GNGSIDFLEFL 71
+G+ID+ EF+
Sbjct: 72 KSGTIDYGEFI 82
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 76 RKMKENVSEE----LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADL 131
+ M E +SEE LKE FK+ D D G I+ EL++ + +G L + E + ++ AD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 132 DGDGLVSFEEF 142
D G + + EF
Sbjct: 71 DKSGTIDYGEF 81
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLSDEETEQMIREADLDGDGLVSF 139
++++K+ F + D+D+ GFI EL +++ LS +ET+ ++ D DGDG +
Sbjct: 4 ADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGV 63
Query: 140 EEFARMM 146
EEF+ ++
Sbjct: 64 EEFSTLV 70
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 22/158 (13%)
Query: 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRK--EEVQEMISEVDFDG---NGSI 65
++F E + D D G + K+L +IQ + E EM + VD G +G I
Sbjct: 16 SQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKI 75
Query: 66 DFLEFLTIMG---------RKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER 116
+E ++ R + EE + ++ +D D GFI EL+N + +L E+
Sbjct: 76 GIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEK 135
Query: 117 LSD--------EETEQMIREADLDGDGLVSFEEFARMM 146
+ E T+ M++ D + DG + E AR++
Sbjct: 136 ANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 21/123 (17%)
Query: 12 EFQEAFCMIDKDSDGLIT-------MKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS 64
EF + + D D G I +KDL D+ E M+ D + +G
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGK 163
Query: 65 IDFLE-----------FLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL 113
++ E L G KM +E +AF+++D+D +G+I EL ++ +L
Sbjct: 164 LELTEMARLLPVQENFLLKFQGIKM---CGKEFNKAFELYDQDGNGYIDENELDALLKDL 220
Query: 114 GER 116
E+
Sbjct: 221 CEK 223
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLSDEETEQMIREADLDGDGLVSF 139
++++K+AF + +D+ GFI EL+ + N L+D ET+ ++ D DGDG +
Sbjct: 40 ADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGV 99
Query: 140 EEFARMMMA 148
+E+ ++ A
Sbjct: 100 DEWTALVKA 108
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 28 ITMKDLATVIQSAQDEHP-------RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE 80
I++K+L T++ +H E + M++ +D DGNG + +EF I+ +++
Sbjct: 550 ISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEF-NILWNRIRN 608
Query: 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFE 140
++ F+ FD D+ G +SA E+R + G +L + Q+I D + ++ F+
Sbjct: 609 YLT-----IFRKFDLDKSGSMSAYEMRMAIEAAGFKLPC-QLHQVIVARFADDELIIDFD 662
Query: 141 EFARMMM 147
F R ++
Sbjct: 663 NFVRCLV 669
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL--GERLS----DEETEQMIREADL 131
M V EL+ AFK D + DG+++A EL+ M+ L + LS E + ++I+ AD
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 132 DGDGLVSFEEF 142
+ DG +S EEF
Sbjct: 61 NSDGKISKEEF 71
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 67 FLEFLTIMGRKMK-ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG-ERLSDEETEQ 124
+ + L +M KM E EL + F + + I+A LR LG E +S E+ +
Sbjct: 22 YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81
Query: 125 MIREADLDGDGLVSFEEFARMMM 147
M+RE DLDGDG ++ EF +M+
Sbjct: 82 MVREGDLDGDGALNQTEFCVLMV 104
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
E+ ++E + F ++ LIT + L E KE+ Q M+ E D DG+G+++
Sbjct: 36 EEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALN 95
Query: 67 FLEFLTIMGR 76
EF +M R
Sbjct: 96 QTEFCVLMVR 105
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 70 FLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL--GER-LSDEETEQMI 126
F T KM N ++K+ F+ D DQ G++ EL+ + G R L++ ET+ ++
Sbjct: 31 FQTSGLSKMSAN---QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLM 87
Query: 127 READLDGDGLVSFEEFARMMMA 148
AD DGDG + EEF M+ +
Sbjct: 88 AAADNDGDGKIGAEEFQEMVHS 109
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNV--- 109
+ + D GS+ F +F+T + ++ V E+L+ F ++D ++DG+I+ E+ ++
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 110 ---MMN------LGERLSDEETEQMIREADLDGDGLVSFEEF 142
MM L E + + ++ D + DG+V+ +EF
Sbjct: 118 IYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 44 HPRKEEVQEMISEVDFDGNGSI-DFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFIS 102
+P KE + + S + S DFL+ L++ ++ AF++FD D DG ++
Sbjct: 59 NPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHY--AFRIFDFDDDGTLN 116
Query: 103 A---AELRNVMMNLGE--RLSDEETEQMI----READLDGDGLVSFEEFARMM 146
+ L N + GE RLS E +Q+I E+D+D DG ++ EF ++
Sbjct: 117 REDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 169
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQ--SAQDEHPR------KEEVQE 52
+D T D + + AF + D D DG + +DL+ ++ + + E R K+ +
Sbjct: 90 FSDTATPDIKSHY--AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDN 147
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKV 92
++ E D D +G+I+ EF ++ R S + +FK+
Sbjct: 148 ILEESDIDRDGTINLSEFQHVISR------SPDFASSFKI 181
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 44 HPRKEEVQEMISEVDFDGNGSI-DFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFIS 102
+P KE + + S + S DFL+ L++ ++ AF++FD D DG ++
Sbjct: 90 NPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHY--AFRIFDFDDDGTLN 147
Query: 103 A---AELRNVMMNLGE--RLSDEETEQMI----READLDGDGLVSFEEFARMM 146
+ L N + GE RLS E +Q+I E+D+D DG ++ EF ++
Sbjct: 148 REDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 200
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQ--SAQDEHPR------KEEVQEM 53
+D T D + + AF + D D DG + +DL+ ++ + + E R K+ + +
Sbjct: 122 SDTATPDIKSHY--AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNI 179
Query: 54 ISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKV 92
+ E D D +G+I+ EF ++ R S + +FK+
Sbjct: 180 LEESDIDRDGTINLSEFQHVISR------SPDFASSFKI 212
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLSDEETEQMIREADLDGDGLVSF 139
++++K+AF + +D+ GFI EL+ + N L+D ET+ ++ D DGDG +
Sbjct: 40 ADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGV 99
Query: 140 EEFARMMMA 148
+++ ++ A
Sbjct: 100 DDWTALVKA 108
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNV--- 109
+ + D GS+ F +F+T + ++ V E+L+ F ++D ++DG+I+ E+ ++
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153
Query: 110 ---MMN------LGERLSDEETEQMIREADLDGDGLVSFEEF 142
MM L E + + ++ D + DG+V+ +EF
Sbjct: 154 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNV--- 109
+ + D GS+ F +F+T + ++ V E+L+ F ++D ++DG+I+ E+ ++
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 110 ---MMN------LGERLSDEETEQMIREADLDGDGLVSFEEF 142
MM L E + + ++ D + DG+V+ +EF
Sbjct: 118 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 27 LITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL 86
+++ +D+A +Q QD P E Q+ F T KM + ++
Sbjct: 5 ILSAEDIAAALQECQD--PDTFEPQKF----------------FQTSGLSKMS---ASQV 43
Query: 87 KEAFKVFDRDQDGFISAAELRNVMMNL---GERLSDEETEQMIREADLDGDGLVSFEEFA 143
K+ F+ D DQ G++ EL+ + L++ ET+ ++ AD DGDG + +EF
Sbjct: 44 KDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQ 103
Query: 144 RMMMA 148
M+ +
Sbjct: 104 EMVHS 108
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNV--- 109
+ + D GS+ F +F+T + ++ V E+L+ F ++D ++DG+I+ E+ ++
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 110 ---MMN------LGERLSDEETEQMIREADLDGDGLVSFEEF 142
MM L E + + ++ D + DG+V+ +EF
Sbjct: 121 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 67 FLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
+LE+L+I K+NV EEL + F FD + G+++ ++++N++ G+ L+D+E
Sbjct: 69 YLEYLSICVHD-KDNV-EELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE 121
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71
E E F +D D G I++ +L + SA ++++ D + +G I F EF
Sbjct: 28 ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFS-LATTEKLLHMYDKNHSGEITFDEF- 85
Query: 72 TIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADL 131
K + ++E F+ D DG + + E+R +++ G ++S++ + ++R+ D
Sbjct: 86 -----KDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDR 140
Query: 132 DGDGLVSFEEFARM 145
G + F+++ +
Sbjct: 141 QRRGSLGFDDYVEL 154
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 76 RKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG 135
R M +N +EL E F+ D D G IS EL + + G S TE+++ D + G
Sbjct: 21 RHMNDN--QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSG 78
Query: 136 LVSFEEF 142
++F+EF
Sbjct: 79 EITFDEF 85
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 60/153 (39%), Gaps = 20/153 (13%)
Query: 17 FCMIDKDSDGLITMKDL---------ATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDF 67
F +D + +G IT+ ++ A + + +E V+ ++ D ++F
Sbjct: 29 FNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIGLDYGKEVEF 88
Query: 68 LEF-----------LTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER 116
F L + + K + + F +FD+D G IS E + G
Sbjct: 89 PAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGIC 148
Query: 117 LSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
SDE+ E+ + DLD G + +E R + F
Sbjct: 149 PSDEDAEKTFKHCDLDNSGKLDVDEMTRQHLGF 181
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 18/101 (17%)
Query: 58 DFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNV-------- 109
D D NG IDF EF+ + + ++++L AF+++D D +G IS E+ +
Sbjct: 73 DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMV 132
Query: 110 --MMNLGERLSDEETE-----QMIREADLDGDGLVSFEEFA 143
M+ L E DE+T ++ D + DG ++ EEF
Sbjct: 133 GSMVKLPE---DEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 89 AFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148
F VFD D++G+I E + +++ + DLD +GL+S++E R++ A
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDE-HPRKEEVQEMISEVD----------F 59
A F + + D D +G I K+L + + P+ + E + ++ F
Sbjct: 11 AGFLQIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATF 70
Query: 60 DGNGSIDFL---------EFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVM 110
DG I+ L FL I R+ + S E + ++ +D D G+ISAAEL+N +
Sbjct: 71 DGRLQIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFL 130
Query: 111 MNL--------GERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+L DE T+ + D + DG + + AR++
Sbjct: 131 KDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLDLNDLARIL 174
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 9 QIAEFQEAFCMIDKDSDGLITMKDLATV----IQSAQDEHPRKEEVQEMISEVDFDGNG- 63
I + F +D + +G IT+ ++ + I + + P + + ++ E F G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 ----SIDFLEFL-------TIMGRKMKENVSEELKE----AFKVFDRDQDGFISAAELRN 108
I F +FL T +K N ++E F +FD+D G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
G S E+ E R DLD G + +E R + F
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLGF 178
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 9 QIAEFQEAFCMIDKDSDGLITMKDLATV----IQSAQDEHPRKEEVQEMISEVDFDGNG- 63
I + F +D + +G IT+ ++ + I + + P + + ++ E F G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 ----SIDFLEFL-------TIMGRKMKENVSEELKE----AFKVFDRDQDGFISAAELRN 108
I F +FL T +K N ++E F +FD+D G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
G S E+ E R DLD G + +E R + F
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLGF 178
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 9 QIAEFQEAFCMIDKDSDGLITMKDLATV----IQSAQDEHPRKEEVQEMISEVDFDGNG- 63
I + F +D + +G IT+ ++ + I + + P + + ++ E F G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 ----SIDFLEFL-------TIMGRKMKENVSEELKE----AFKVFDRDQDGFISAAELRN 108
I F +FL T +K N ++E F +FD+D G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
G S E+ E R DLD G + +E R + F
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLGF 178
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMN------------LGERLSDEETEQMIREA 129
V E+LK AF ++D ++DG+I+ E+ +M + L E E E+ +
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKM 66
Query: 130 DLDGDGLVSFEEF 142
D + DG+V+ EEF
Sbjct: 67 DRNQDGVVTIEEF 79
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 59 FDGN--GSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNV------M 110
FD N G I+F EF+ + + + E+L+ AFK++D D DG+I+ E+ ++ M
Sbjct: 72 FDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM 131
Query: 111 MNLGERLSDEE------TEQMIREADLDGDGLVSFEEF 142
+ L +EE +++ D + DG ++ +EF
Sbjct: 132 VGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 89 AFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVS 138
F VFD ++DG I +E + DE+ + DLD DG ++
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYIT 117
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 9 QIAEFQEAFCMIDKDSDGLITMKDLATV----IQSAQDEHPRKEEVQEMISEVDFDGNG- 63
I + F +D + +G IT+ ++ + I + + P + + ++ E F G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 ----SIDFLEFL-------TIMGRKMKENVSEELKE----AFKVFDRDQDGFISAAELRN 108
I F +FL T +K N ++E F +FD+D G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
G S E+ E R DLD G + +E R + F
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF 178
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 58 DFDGNGSIDFLEFLTIMGR-KMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER 116
D NG I+F EF+ +G V E++K AFK++D Q GFI EL+ +++ L
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 117 ----LSDEETEQMI----READLDGDGLVSFEEF 142
LS++ E M+ +AD DG + +E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELR 107
E + M+S +D D +G++ F EF + V ++ F FD D+ G + EL+
Sbjct: 73 ETCRLMVSMLDRDMSGTMGFNEFKELWA------VLNGWRQHFISFDTDRSGTVDPQELQ 126
Query: 108 NVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142
+ +G RLS + + + +G ++F+++
Sbjct: 127 KALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDY 159
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 58 DFDGNGSIDFLEFLTIMGR-KMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER 116
D NG I+F EF+ +G V E++K AFK++D Q GFI EL+ +++ L
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 117 ----LSDEETEQMI----READLDGDGLVSFEEF 142
LS++ E M+ +AD DG + +E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 9 QIAEFQEAFCMIDKDSDGLITMKDLATV----IQSAQDEHPRKEEVQEMISEVDFDGNG- 63
I + F +D + +G IT+ ++ + I + + P + + ++ E F G G
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM 77
Query: 64 ----SIDFLEFL-------TIMGRKMKENVSEELKE----AFKVFDRDQDGFISAAELRN 108
I F +FL T +K N ++E F +FD+D G I+ E +
Sbjct: 78 EYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
Query: 109 VMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
G S E+ E R DLD G + +E R + F
Sbjct: 138 YGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTRQHLGF 178
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 87 KEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
K F+ FD+++DG +S E R V + + E+ + E D+DG+G ++ +EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 14 QEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTI 73
+ F DK+ DG +++ + V A + +E++ + E+D DGNG ++ EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVAL-AFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 74 M 74
+
Sbjct: 63 I 63
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAEL 106
+ E + + + D +G+G++D EFL + M + + AF DR DG ++ +L
Sbjct: 72 QAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDL 131
Query: 107 RNVMMNLGER--LSDEETEQMIREADLDG------DGLVSFEEF 142
R V S E TE + LD DG V+ EF
Sbjct: 132 RGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEF 175
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 86 LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARM 145
L F+ DRD + A E R + LG L E E + R+ D +G G + EEF R
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 146 M 146
+
Sbjct: 99 L 99
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
F + D+DQ+G IS E + + G S E+ E+ R D+D G + +E R + F
Sbjct: 115 FDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF 174
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELR 107
E + M+S +D D +G++ F EF K V ++ F D D+ G + EL+
Sbjct: 73 ETCRLMVSMLDRDMSGTMGFNEF------KELWAVLNGWRQHFISLDTDRSGTVDPQELQ 126
Query: 108 NVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142
+ +G RLS + + + +G ++F+++
Sbjct: 127 KALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDY 159
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 15/110 (13%)
Query: 39 SAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM--------GRKMKENVSEEL---- 86
+ QD EE+Q +++ +G S LE IM KM N +EL
Sbjct: 10 AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL 69
Query: 87 ---KEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDG 133
KE F D+D G + ELR + +G RLS + +++ +G
Sbjct: 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG 119
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 15/110 (13%)
Query: 39 SAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM--------GRKMKENVSEEL---- 86
+ QD EE+Q +++ +G S LE IM KM N +EL
Sbjct: 10 AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL 69
Query: 87 ---KEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDG 133
KE F D+D G + ELR + +G RLS + +++ +G
Sbjct: 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG 119
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
+ + F DRD+ G + EL G RLS + +M+R D D +G +SF EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMA 111
Query: 145 M 145
M
Sbjct: 112 M 112
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
+ + + DQ + F +D+D G + + +L + Q + M+ D D
Sbjct: 41 LLNTIPLDQYTRIYQWFMGVDRDRSGTLEINEL-MMGQFPGGIRLSPQTALRMMRIFDTD 99
Query: 61 GNGSIDFLEFLTI 73
NG I F EF+ +
Sbjct: 100 FNGHISFYEFMAM 112
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 33/79 (41%)
Query: 71 LTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREAD 130
L R + E F +FD+D G I+ E + G S+E+ E+ + D
Sbjct: 100 LAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCD 159
Query: 131 LDGDGLVSFEEFARMMMAF 149
LD G + +E R + F
Sbjct: 160 LDNSGELDVDEMTRQHLGF 178
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFAR 144
+ + F DRD+ G + EL G RLS + +M+R D D +G +SF EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMA 111
Query: 145 M 145
M
Sbjct: 112 M 112
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Query: 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD 60
+ + + DQ + F +D+D G + + +L + Q + M+ D D
Sbjct: 41 LLNTIPLDQYTRIYQWFMGVDRDRSGTLEINEL-MMGQFPGGIRLSPQTALRMMRIFDTD 99
Query: 61 GNGSIDFLEFLTIMGRKMKENVSEELKEAFKVF---DRDQDGFISAAELRNVMMNLGERL 117
NG I F EF+ + + ++ A+ +F DR++ G + E+ + LG +
Sbjct: 100 FNGHISFYEFMAM---------YKFMELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYI 150
Query: 118 SDEETEQMIR 127
+ + + R
Sbjct: 151 NQRTSLLLHR 160
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
F + D+DQ+G I+ E + G S E+ E+ R D+D G + +E R + F
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEXTRQHLGF 174
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149
F + D+DQ+G I+ E + G S E+ E+ R D+D G + +E R + F
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF 174
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 67 FLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
+LE+LT ++N EEL + F FD + GF++ + +N++ G+ L+++E
Sbjct: 50 YLEYLTXCVHD-RDNX-EELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQE 102
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142
+ D D+DG++S E + + +G L+D++ D + +G +S +EF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 27/145 (18%)
Query: 5 LTEDQIAEFQEAFCM-IDKDS--DGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDG 61
+ E+ A F + M +DK++ D M+ L VI + E +E D+DG
Sbjct: 22 MLEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDG 81
Query: 62 NGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE 121
N +D LE T + KE SE Q +S EL N++
Sbjct: 82 NNLLDGLELSTAITHVHKEEGSE------------QAPLMSEDELINII----------- 118
Query: 122 TEQMIREADLDGDGLVSFEEFARMM 146
+ ++R+ D + DG + + EFA+ +
Sbjct: 119 -DGVLRDDDKNNDGYIDYAEFAKSL 142
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 32.7 bits (73), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142
+ D D+DG++S E + + +G L+D++ D + +G +S +EF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 88 EAFKV----FDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
EAFKV FD + +G I L+ ++ LG + E +++IRE + S+ +F
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFL 107
Query: 144 RMMMA 148
RMM+
Sbjct: 108 RMMLG 112
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 7 EDQIAEFQEAFCM-IDKDS--DGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNG 63
E+ A F + M +DK++ D M+ L VI + E +E D+DGN
Sbjct: 5 EEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNN 64
Query: 64 SIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETE 123
+D LE T + KE SE Q +S EL N++ +
Sbjct: 65 LLDGLELSTAITHVHKEEGSE------------QAPLMSEDELINII------------D 100
Query: 124 QMIREADLDGDGLVSFEEFARMM 146
++R+ D + DG + + EFA+ +
Sbjct: 101 GVLRDDDKNNDGYIDYAEFAKSL 123
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 86 LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARM 145
L+ F D ++ G + E R + L R+ + E + + D D DG ++F+EFAR
Sbjct: 29 LRSVFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLDADRDGAITFQEFARG 86
Query: 146 MMA 148
+
Sbjct: 87 FLG 89
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLG 114
EEL AF++FD++ DG+I EL ++ G
Sbjct: 5 EELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 86 LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142
LK +K+ D D DG ++ E+ + G E+ + + +AD +GDG ++ EEF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEF 59
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 58 DFDGNGSIDFLEFLTIMGR-KMKENVSEELKEAFKVFDRDQDGFISAAELRNVM------ 110
D NG + F EF + + +++ +F+++D Q GFI E++ ++
Sbjct: 95 DTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAE 154
Query: 111 --MNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147
MNL + + ++ ++ EAD DG + EE+ +++
Sbjct: 155 SGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 193
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 58 DFDGNGSIDFLEFLTIMGR-KMKENVSEELKEAFKVFDRDQDGFISAAELRNVM------ 110
D NG + F EF + + +++ +F+++D Q GFI E++ ++
Sbjct: 64 DTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAE 123
Query: 111 --MNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147
MNL + + ++ ++ EAD DG + EE+ +++
Sbjct: 124 SGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 19 MIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
M DK++DG I + A + + K E E ++VD +GNG + E LT +
Sbjct: 110 MCDKNADGQINADEFAAWLTAL---GMSKAEAAEAFNQVDTNGNGELSLDELLTAV 162
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 24/89 (26%)
Query: 58 DFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERL 117
D+DGN +D LE T + KE SE Q +S EL N++
Sbjct: 28 DYDGNNLLDGLELSTAITHVHKEEGSE------------QAPLMSEDELINII------- 68
Query: 118 SDEETEQMIREADLDGDGLVSFEEFARMM 146
+ ++R+ D + DG + + EFA+ +
Sbjct: 69 -----DGVLRDDDKNNDGYIDYAEFAKSL 92
>pdb|3ZQJ|A Chain A, Mycobacterium Tuberculosis Uvra
pdb|3ZQJ|B Chain B, Mycobacterium Tuberculosis Uvra
pdb|3ZQJ|C Chain C, Mycobacterium Tuberculosis Uvra
pdb|3ZQJ|D Chain D, Mycobacterium Tuberculosis Uvra
pdb|3ZQJ|E Chain E, Mycobacterium Tuberculosis Uvra
pdb|3ZQJ|F Chain F, Mycobacterium Tuberculosis Uvra
Length = 993
Score = 29.3 bits (64), Expect = 0.91, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 66 DFLEFLTIMGRKMKENVSEELKEAFKVFDRD 96
DF L + RKM + SE++KE ++ F RD
Sbjct: 400 DFEGVLAFLQRKMSQTESEQMKERYEGFMRD 430
>pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
pdb|4GNK|D Chain D, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
Length = 1235
Score = 28.9 bits (63), Expect = 1.00, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 13/102 (12%)
Query: 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSID 66
ED+ +QE ++ L+ +++ A V AQ + + + EV D N
Sbjct: 1026 EDEAKRYQE---FQNRQVQSLLELRE-AQVDAEAQRRLEHLRQALQRLREVVLDAN---- 1077
Query: 67 FLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRN 108
T +++KE E KE K+ DR + IS A++R+
Sbjct: 1078 -----TTQFKRLKEMNEREKKELQKILDRKRHNSISEAKMRD 1114
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 27/46 (58%)
Query: 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREA 129
+E + F +FDR+ + ++ +++ LG+ + ETE +++EA
Sbjct: 14 DECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEA 59
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 88 EAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
E F D+D DGF+S E+R + + G L + D G +S ++FA
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFA 67
>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Ii From Burkholderia Vietnamiensis
Length = 451
Score = 28.5 bits (62), Expect = 1.7, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 75 GRKMKENVSEELKEAFKVFDRDQDGFI 101
R + SEE A + FDRD+DGF+
Sbjct: 235 ARALSTGFSEEPVRASRPFDRDRDGFV 261
>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Ii From Burkholderia Vietnamiensis In Complex
With Platencin
pdb|4F32|B Chain B, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Ii From Burkholderia Vietnamiensis In Complex
With Platencin
Length = 451
Score = 28.5 bits (62), Expect = 1.7, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 75 GRKMKENVSEELKEAFKVFDRDQDGFI 101
R + SEE A + FDRD+DGF+
Sbjct: 235 ARALSTGFSEEPVRASRPFDRDRDGFV 261
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 23/30 (76%)
Query: 117 LSDEETEQMIREADLDGDGLVSFEEFARMM 146
+++E+ E +++++D + DG + F+EF +MM
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|1BJA|A Chain A, Activation Domain Of The Phage T4 Transcription Factor
Mota
pdb|1BJA|B Chain B, Activation Domain Of The Phage T4 Transcription Factor
Mota
Length = 95
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 100 FISAAELRNVMMNLGERLSDEETEQMIREADLD--GDGLV 137
FI+AAE+R V +LG + + +I++ ++ GDGL+
Sbjct: 30 FITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLI 69
>pdb|1I1S|A Chain A, Solution Structure Of The Transcriptional Activation
Domain Of The Bacteriophage T4 Protein Mota
Length = 96
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 100 FISAAELRNVMMNLGERLSDEETEQMIREADLD--GDGLV 137
FI+AAE+R V +LG + + +I++ ++ GDGL+
Sbjct: 31 FITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLI 70
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 26/43 (60%)
Query: 32 DLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
DL ++++ ++ RK+ E+D + +G+++F EFL ++
Sbjct: 33 DLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILV 75
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMG 75
M+ ++D D +G +DF EFL ++G
Sbjct: 61 MMKKLDLDSDGQLDFQEFLNLIG 83
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 98 DGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+GF+S +++ V++N +L + ++ +D+D DG++ +EFA M
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 98 DGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+GF+S +++ V++N +L + ++ +D+D DG++ +EFA M
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 69
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 98 DGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+GF+S +++ V++N +L + ++ +D+D DG++ +EFA M
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p
Determined At 2.0a Resolution By X-Ray
Length = 95
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 31 KDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
K+L +QS +D K+ V +++ ++D +G+ +DF EF+ +
Sbjct: 39 KELPGFLQSGKD----KDAVDKLLKDLDANGDAQVDFSEFIVFV 78
>pdb|1SP8|A Chain A, 4-hydroxyphenylpyruvate Dioxygenase
pdb|1SP8|B Chain B, 4-hydroxyphenylpyruvate Dioxygenase
pdb|1SP8|C Chain C, 4-hydroxyphenylpyruvate Dioxygenase
pdb|1SP8|D Chain D, 4-hydroxyphenylpyruvate Dioxygenase
Length = 418
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 2 ADALTEDQIAEFQEAFCMIDKDSDGLI 28
D LTE QI E QE ++D+D G++
Sbjct: 327 GDVLTEAQIKECQELGVLVDRDDQGVL 353
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p
Protein Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p
Protein Determined By Nmr Spectroscopy
Length = 95
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 31 KDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
K+L +QS +D K+ V +++ ++D +G+ +DF EF+ +
Sbjct: 39 KELPGFLQSGKD----KDAVDKLLKDLDANGDAQVDFSEFIVFV 78
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 98 DGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146
+GF+S +++ V++N +L + ++ +D+D DG++ +EFA M
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAM 74
>pdb|1MR8|A Chain A, Migration Inhibitory Factor-Related Protein 8 From Human
pdb|1MR8|B Chain B, Migration Inhibitory Factor-Related Protein 8 From Human
Length = 93
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 26/43 (60%)
Query: 32 DLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74
DL ++++ ++ RK+ E+D + +G+++F EFL ++
Sbjct: 33 DLKKLLETECPQYIRKKGADVWFKELDINTDGAVNFQEFLILV 75
>pdb|3VSK|A Chain A, Crystal Structure Of Penicillin-Binding Protein 3 (Pbp3)
From Methicilin-Resistant Staphylococcus Aureus In The
Apo Form.
pdb|3VSK|B Chain B, Crystal Structure Of Penicillin-Binding Protein 3 (Pbp3)
From Methicilin-Resistant Staphylococcus Aureus In The
Apo Form.
pdb|3VSL|A Chain A, Crystal Structure Of Penicillin-Binding Protein 3 (Pbp3)
From Methicilin-Resistant Staphylococcus Aureus In The
Cefotaxime Bound Form.
pdb|3VSL|B Chain B, Crystal Structure Of Penicillin-Binding Protein 3 (Pbp3)
From Methicilin-Resistant Staphylococcus Aureus In The
Cefotaxime Bound Form
Length = 646
Score = 26.9 bits (58), Expect = 4.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 6 TEDQIAEFQEAFCMI--DKDSDGLITMKDLATVIQSA 40
TE +I + QE F M DKD G ++ KD TV+ +A
Sbjct: 537 TEKEIKQIQEGFKMAFNDKDGTGYVSFKD--TVVPTA 571
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKD--LATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
D A Q F D +SDG + K+ +A + SA + ++++ S D DGNG+I
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTN---QKLEWAFSLYDVDGNGTI 116
Query: 66 DFLEFLTIM 74
E L I+
Sbjct: 117 SKNEVLEIV 125
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 62 NGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
+G I EF TI + E + + F+ FD + DG + E + +++
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ 99
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
+ E D+DG+G +S E ++ A
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKD--LATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
D A Q F D +SDG + K+ +A + SA + ++++ S D DGNG+I
Sbjct: 61 DPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTN---QKLEWAFSLYDVDGNGTI 117
Query: 66 DFLEFLTIM 74
E L I+
Sbjct: 118 SKNEVLEIV 126
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 62 NGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
+G I EF TI + E + + F+ FD + DG + E + +++
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ 100
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
+ E D+DG+G +S E ++ A
Sbjct: 101 KLEWAFSLYDVDGNGTISKNEVLEIVTA 128
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKD--LATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
D A Q F D +SDG + K+ +A + SA + ++++ S D DGNG+I
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTN---QKLEWAFSLYDVDGNGTI 116
Query: 66 DFLEFLTIM 74
E L I+
Sbjct: 117 SKNEVLEIV 125
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 62 NGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
+G I EF TI + E + + F+ FD + DG + E + +++
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ 99
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
+ E D+DG+G +S E ++ A
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIVTA 127
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 62 NGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDE 120
+G I EF TI + E + + F+ FD + DG + E + +++
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ 99
Query: 121 ETEQMIREADLDGDGLVSFEEFARMMMA 148
+ E D+DG+G +S E ++ A
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIVTA 127
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKD--LATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
D A Q F D +SDG + K+ +A + SA + ++++ S D DGNG+I
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTN---QKLEWAFSLYDVDGNGTI 116
Query: 66 DFLEFLTIM 74
E L I+
Sbjct: 117 SKNEVLEIV 125
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 14/72 (19%)
Query: 83 SEELKEAFKVFDRDQDG--------FISAAELRNVMMNLGERLSDEETEQMIREADLDGD 134
EELK F+ +D++ DG + E +++ + +++ E D +GD
Sbjct: 4 PEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDKNGD 57
Query: 135 GLVSFEEFARMM 146
G VSFEEF ++
Sbjct: 58 GEVSFEEFQVLV 69
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 24/69 (34%)
Query: 102 SAAELRNVMMNLGER------LSDEETEQMIR------------------EADLDGDGLV 137
S AEL+++ + LS EE +Q+I+ E D +GDG V
Sbjct: 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEV 64
Query: 138 SFEEFARMM 146
SFEEF ++
Sbjct: 65 SFEEFQVLV 73
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 122 TEQMIREADLDGDGLVSFEE 141
E + +E D++GDG VS+EE
Sbjct: 2 AEALFKEIDVNGDGAVSYEE 21
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 28/127 (22%)
Query: 48 EEVQEMISEVDFDGNGSIDFLEF-------LTIMGRKMKENVSEEL---KEAF-----KV 92
+ + D DGNG ID +F L G + + + L EA +
Sbjct: 4 RRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGI 63
Query: 93 FDRDQDGFISAAELRNVMMNLGERLSDEETE--QMIRE--------ADLDGDGLVSFEEF 142
DRD D I+ E + +RL D+ +M R AD DGDG V+ +
Sbjct: 64 ADRDGDQRITREEF---VTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120
Query: 143 ARMMMAF 149
AR + AF
Sbjct: 121 ARALTAF 127
>pdb|1BWZ|A Chain A, Diaminopimelate Epimerase From Hemophilus Influenzae
Length = 274
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 55 SEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG 114
SEV GNG+ F F+T+ G K+++S ++ V ++ ++ + +N+G
Sbjct: 68 SEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMV--------LTVKDMNQIRVNMG 119
Query: 115 ERLSDE 120
E + +
Sbjct: 120 EPIWEP 125
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKD--LATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
D A Q F D +SDG + K +A + SA + ++++ S D DGNG+I
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTN---QKLEWAFSLYDVDGNGTI 116
Query: 66 DFLEFLTIM 74
E L I+
Sbjct: 117 SKNEVLEIV 125
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 53 MISEVDFDGNGSIDFLEFLTIMG 75
M+ ++D + +G +DF EFL ++G
Sbjct: 59 MMKKLDLNSDGQLDFQEFLNLIG 81
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 8 DQIAEFQEAFCMIDKDSDGLITMKD--LATVIQSAQDEHPRKEEVQEMISEVDFDGNGSI 65
D A Q F D +SDG + K +A + SA + ++++ S D DGNG+I
Sbjct: 60 DPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTN---QKLEWAFSLYDVDGNGTI 116
Query: 66 DFLEFLTIM 74
E L I+
Sbjct: 117 SKNEVLEIV 125
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 61 GNGSIDFLEFLTIMGRKMKENVSE--ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLS 118
G G D +EFL R M + + EL F D+D + E + + L E
Sbjct: 110 GVGEEDLVEFLEF--RLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGV 167
Query: 119 D-EETEQMIREADLDGDGLVSFEEFA 143
D + + E D +G G+V+F+EF+
Sbjct: 168 DITDATTVFNEIDTNGSGVVTFDEFS 193
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 30 MKDL-ATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMG 75
+KDL T + S D + V +++ E+D +G+G +DF EF+ ++
Sbjct: 33 LKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVA 79
>pdb|2QPT|A Chain A, Crystal Structure Of An Ehd Atpase Involved In Membrane
Remodelling
Length = 550
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 98 DGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143
DG +S ++ + M+ G +L + ++ + +D+D DG++ EEFA
Sbjct: 471 DGKLSGSKAKTWMV--GTKLPNSVLGRIWKLSDVDRDGMLDDEEFA 514
>pdb|1Z7D|A Chain A, Ornithine Aminotransferase Py00104 From Plasmodium Yoelii
pdb|1Z7D|B Chain B, Ornithine Aminotransferase Py00104 From Plasmodium Yoelii
pdb|1Z7D|C Chain C, Ornithine Aminotransferase Py00104 From Plasmodium Yoelii
pdb|1Z7D|D Chain D, Ornithine Aminotransferase Py00104 From Plasmodium Yoelii
pdb|1Z7D|E Chain E, Ornithine Aminotransferase Py00104 From Plasmodium Yoelii
pdb|1Z7D|F Chain F, Ornithine Aminotransferase Py00104 From Plasmodium Yoelii
Length = 433
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 74 MGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL 113
+G EN+ ELK++ V D G + A E +N ++N+
Sbjct: 341 LGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNV 380
>pdb|1PUJ|A Chain A, Structure Of B. Subtilis Ylqf Gtpase
Length = 282
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 64 SIDFLEFLTIMG-RKMKENVSEELKEAFKVFDRDQDG---FISAAELRNVMMNLGERLSD 119
SI L+ + + G R ++E+ E LKE + + + +D F + E R +M+ G D
Sbjct: 198 SIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMSGGLINYD 257
Query: 120 EETEQMIREADLDGDGLVSFEE 141
+ TE +IR+ + G +SFE+
Sbjct: 258 KTTEVIIRDIRTEKFGRLSFEQ 279
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,890,709
Number of Sequences: 62578
Number of extensions: 147259
Number of successful extensions: 2074
Number of sequences better than 100.0: 388
Number of HSP's better than 100.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 543
Number of HSP's gapped (non-prelim): 788
length of query: 149
length of database: 14,973,337
effective HSP length: 90
effective length of query: 59
effective length of database: 9,341,317
effective search space: 551137703
effective search space used: 551137703
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)