Query 032008
Match_columns 149
No_of_seqs 134 out of 1190
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 13:17:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032008.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032008hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lmt_A Calmodulin-related prot 100.0 1.3E-32 4.5E-37 168.2 14.5 146 1-148 1-147 (148)
2 2lhi_A Calmodulin, serine/thre 100.0 4.1E-32 1.4E-36 170.3 12.2 145 2-148 2-147 (176)
3 3ox6_A Calcium-binding protein 100.0 8E-31 2.7E-35 160.5 15.8 147 1-148 1-153 (153)
4 4ds7_A Calmodulin, CAM; protei 100.0 1.2E-30 4.1E-35 158.8 15.9 146 1-148 1-147 (147)
5 1exr_A Calmodulin; high resolu 100.0 1.8E-30 6.1E-35 158.6 16.6 145 3-148 2-147 (148)
6 3i5g_C Myosin catalytic light 100.0 3.6E-31 1.2E-35 163.5 13.6 144 3-148 1-151 (159)
7 3u0k_A Rcamp; fluorescent prot 100.0 9.1E-31 3.1E-35 179.8 16.8 145 3-148 294-439 (440)
8 2obh_A Centrin-2; DNA repair c 100.0 9.5E-31 3.3E-35 159.0 15.0 141 6-147 1-142 (143)
9 3fwb_A Cell division control p 100.0 9.1E-30 3.1E-34 157.1 17.6 145 3-148 15-160 (161)
10 2jnf_A Troponin C; stretch act 100.0 6.2E-30 2.1E-34 157.6 15.0 145 3-148 5-155 (158)
11 3qrx_A Centrin; calcium-bindin 100.0 1.2E-29 4E-34 157.9 16.3 144 4-148 21-165 (169)
12 1dtl_A Cardiac troponin C; hel 100.0 6.6E-30 2.3E-34 157.8 14.5 146 2-148 9-159 (161)
13 2f2o_A Calmodulin fused with c 100.0 8.2E-30 2.8E-34 160.0 14.9 147 1-148 1-148 (179)
14 1top_A Troponin C; contractIle 100.0 1.5E-29 5.1E-34 156.3 14.4 146 2-148 11-160 (162)
15 2bl0_C Myosin regulatory light 100.0 1.8E-29 6.3E-34 152.9 14.3 140 6-147 1-141 (142)
16 3i5g_B Myosin regulatory light 100.0 1.4E-29 4.8E-34 155.4 13.1 139 4-148 9-148 (153)
17 1wdc_C Scallop myosin; calcium 100.0 3.4E-29 1.2E-33 154.0 14.6 143 4-148 2-150 (156)
18 3pm8_A PFCDPK2, calcium-depend 100.0 4E-30 1.4E-34 164.0 10.0 146 2-148 48-195 (197)
19 2mys_C Myosin; muscle protein, 100.0 2.4E-28 8.1E-33 148.9 17.0 141 5-148 2-148 (149)
20 2ovk_C Myosin catalytic light 100.0 5.2E-29 1.8E-33 153.7 14.0 144 3-148 1-151 (159)
21 3j04_B Myosin regulatory light 100.0 5.1E-29 1.7E-33 151.1 12.5 139 5-148 1-140 (143)
22 1m45_A MLC1P, myosin light cha 100.0 1.7E-29 5.9E-34 154.0 9.6 139 9-148 2-147 (148)
23 1qv0_A Obelin, OBL; photoprote 100.0 1.9E-28 6.4E-33 155.6 14.2 146 2-148 11-177 (195)
24 1w7j_B Myosin light chain 1; m 100.0 1.7E-29 5.8E-34 154.5 9.0 143 4-148 3-150 (151)
25 3sjs_A URE3-BP sequence specif 100.0 3E-28 1E-32 157.7 15.0 139 2-148 42-180 (220)
26 1nya_A Calerythrin; EF-hand, m 100.0 5.5E-28 1.9E-32 151.1 15.5 142 5-149 1-165 (176)
27 2mys_B Myosin; muscle protein, 100.0 1.2E-27 4.2E-32 148.4 16.8 141 3-148 17-159 (166)
28 1wdc_B Scallop myosin; calcium 100.0 1.3E-27 4.4E-32 147.0 16.4 140 3-148 10-150 (156)
29 3k21_A PFCDPK3, calcium-depend 100.0 5.4E-28 1.8E-32 153.4 14.4 143 2-147 43-190 (191)
30 1uhk_A Aequorin 2, aequorin; E 100.0 6.7E-28 2.3E-32 152.6 14.0 144 4-148 9-173 (191)
31 2ovk_B RLC, myosin regulatory 100.0 6E-28 2E-32 148.0 12.6 140 3-148 8-148 (153)
32 2aao_A CDPK, calcium-dependent 100.0 2.1E-28 7.3E-33 151.8 10.3 144 2-148 18-161 (166)
33 3dtp_E RLC, myosin regulatory 100.0 1.1E-27 3.6E-32 152.6 12.7 139 4-148 50-189 (196)
34 2bl0_B Myosin regulatory light 100.0 2.1E-27 7.3E-32 144.1 13.4 137 5-148 2-140 (145)
35 2ccm_A Calexcitin; EF hand, ca 100.0 4.6E-27 1.6E-31 148.9 14.9 145 2-148 3-171 (191)
36 2bec_A Calcineurin B homologou 100.0 2.6E-27 9.1E-32 151.3 13.9 140 4-148 22-183 (202)
37 1s6i_A CDPK, calcium-dependent 100.0 3.9E-29 1.3E-33 158.3 4.9 143 3-148 2-144 (188)
38 3mse_B Calcium-dependent prote 100.0 5.8E-27 2E-31 147.3 13.8 140 3-148 29-178 (180)
39 2hpk_A Photoprotein berovin; s 100.0 2E-27 6.8E-32 152.5 11.8 143 3-148 28-190 (208)
40 3ll8_B Calcineurin subunit B t 100.0 6.2E-27 2.1E-31 143.5 13.5 138 6-148 1-144 (155)
41 3khe_A Calmodulin-like domain 99.9 5.4E-28 1.9E-32 153.0 8.6 141 6-148 35-185 (191)
42 3e3r_A Calcyphosin, calcyphosi 99.9 4.1E-27 1.4E-31 150.4 11.9 142 6-148 32-181 (204)
43 3sg6_A Gcamp2, myosin light ch 99.9 2.6E-26 9E-31 160.5 16.4 144 4-148 305-449 (450)
44 2znd_A Programmed cell death p 99.9 2.5E-26 8.5E-31 143.4 14.2 133 8-147 4-137 (172)
45 1q80_A SCP, sarcoplasmic calci 99.9 2.2E-26 7.5E-31 143.6 13.4 138 6-148 1-156 (174)
46 3akb_A Putative calcium bindin 99.9 5.2E-26 1.8E-30 140.8 14.8 137 9-148 2-160 (166)
47 1ggw_A Protein (CDC4P); light 99.9 8.9E-27 3.1E-31 140.7 10.9 133 10-148 4-139 (140)
48 2sas_A Sarcoplasmic calcium-bi 99.9 8.4E-27 2.9E-31 146.7 10.8 141 5-148 2-167 (185)
49 1y1x_A Leishmania major homolo 99.9 5.1E-26 1.8E-30 144.3 14.5 131 10-147 26-156 (191)
50 2qac_A Myosin A tail domain in 99.9 5.2E-26 1.8E-30 138.3 13.6 138 4-148 7-146 (146)
51 3cs1_A Flagellar calcium-bindi 99.9 3E-27 1E-31 152.9 6.0 147 2-148 39-195 (219)
52 1alv_A Calpain, S-camld; calci 99.9 1.8E-25 6.2E-30 139.6 13.6 131 9-147 2-139 (173)
53 2l2e_A Calcium-binding protein 99.9 4.6E-25 1.6E-29 139.5 15.6 145 4-148 7-175 (190)
54 1jba_A GCAP-2, protein (guanyl 99.9 6E-25 2.1E-29 140.6 16.1 140 8-148 19-176 (204)
55 2lvv_A Flagellar calcium-bindi 99.9 1.1E-26 3.6E-31 151.0 8.0 145 2-148 42-198 (226)
56 3dd4_A KV channel-interacting 99.9 5.1E-25 1.7E-29 143.3 15.8 143 4-148 60-214 (229)
57 2ct9_A Calcium-binding protein 99.9 1E-25 3.6E-30 144.6 12.0 140 4-148 22-182 (208)
58 1s6c_A KV4 potassium channel-i 99.9 1E-24 3.4E-29 137.2 15.7 142 4-148 14-168 (183)
59 1jfj_A Ehcabp, calcium-binding 99.9 8.7E-26 3E-30 135.1 9.6 129 13-146 2-133 (134)
60 2zfd_A Calcineurin B-like prot 99.9 1.7E-24 6E-29 140.5 16.5 143 4-148 41-194 (226)
61 3mwu_A Calmodulin-domain prote 99.9 3.4E-26 1.1E-30 163.2 9.1 144 6-149 326-482 (486)
62 3nyv_A Calmodulin-domain prote 99.9 3.8E-25 1.3E-29 157.6 14.0 142 5-148 329-480 (484)
63 2ehb_A Calcineurin B-like prot 99.9 2.4E-24 8.3E-29 138.0 16.2 143 4-148 30-183 (207)
64 1juo_A Sorcin; calcium-binding 99.9 3.3E-25 1.1E-29 141.2 12.0 134 5-148 27-165 (198)
65 2hps_A Coelenterazine-binding 99.9 7.1E-26 2.4E-30 142.8 8.6 146 1-148 4-166 (186)
66 3q5i_A Protein kinase; CDPK, m 99.9 4.4E-25 1.5E-29 158.0 13.4 142 5-148 349-497 (504)
67 2r2i_A Guanylyl cyclase-activa 99.9 4.1E-25 1.4E-29 140.7 11.9 141 7-148 10-159 (198)
68 1dgu_A Calcium-saturated CIB; 99.9 4.9E-25 1.7E-29 138.7 11.9 140 4-148 13-171 (183)
69 1gjy_A Sorcin, CP-22, V19; cal 99.9 5.6E-24 1.9E-28 132.1 16.2 124 15-147 5-133 (167)
70 3lij_A Calcium/calmodulin depe 99.9 2.3E-25 7.9E-30 159.1 9.9 141 6-148 341-488 (494)
71 1k94_A Grancalcin; penta-EF-ha 99.9 6.5E-24 2.2E-28 131.6 14.9 124 15-147 3-131 (165)
72 1s1e_A KV channel interacting 99.9 1.1E-23 3.9E-28 136.6 16.5 142 5-148 48-201 (224)
73 1g8i_A Frequenin, neuronal cal 99.9 3.5E-24 1.2E-28 135.4 13.6 136 13-148 27-175 (190)
74 2d8n_A Recoverin; structural g 99.9 4.2E-24 1.4E-28 136.9 13.3 136 12-148 34-185 (207)
75 2f33_A Calbindin; EF-hand, Ca2 99.9 5.5E-25 1.9E-29 145.4 9.5 143 4-147 9-174 (263)
76 1fpw_A Yeast frequenin, calciu 99.9 1.9E-23 6.5E-28 132.0 16.0 142 5-148 22-175 (190)
77 2ggz_A Guanylyl cyclase-activa 99.9 1.4E-24 4.7E-29 139.7 10.1 138 10-148 18-163 (211)
78 3a8r_A Putative uncharacterize 99.9 1.9E-24 6.5E-29 135.8 10.1 135 8-148 25-170 (179)
79 2l4h_A Calcium and integrin-bi 99.9 1.5E-24 5.2E-29 139.8 9.2 140 4-148 44-202 (214)
80 1bjf_A Neurocalcin delta; calc 99.9 1.4E-23 4.9E-28 132.9 13.1 135 12-147 26-174 (193)
81 2jul_A Calsenilin; EF-hand, ca 99.9 7.2E-23 2.5E-27 135.2 16.3 142 5-148 88-241 (256)
82 2i7a_A Calpain 13; calcium-dep 99.9 4.6E-23 1.6E-27 128.8 13.2 119 21-147 14-141 (174)
83 2be4_A Hypothetical protein LO 99.9 5.6E-24 1.9E-28 141.2 9.6 143 4-147 4-175 (272)
84 1ij5_A Plasmodial specific LAV 99.9 3.5E-24 1.2E-28 145.6 8.1 131 9-148 186-318 (323)
85 2f33_A Calbindin; EF-hand, Ca2 99.9 2.2E-23 7.4E-28 137.7 10.9 139 10-148 102-260 (263)
86 1ij5_A Plasmodial specific LAV 99.9 5.7E-24 1.9E-28 144.6 6.6 136 3-147 114-250 (323)
87 2be4_A Hypothetical protein LO 99.9 3.4E-23 1.2E-27 137.4 9.4 137 11-147 104-267 (272)
88 3bow_A Calpain-2 catalytic sub 99.9 1.9E-22 6.7E-27 149.1 13.6 136 4-147 524-667 (714)
89 1bu3_A Calcium-binding protein 99.9 2.9E-20 9.9E-25 107.7 12.5 102 42-147 4-108 (109)
90 5pal_A Parvalbumin; calcium-bi 99.9 2.5E-20 8.6E-25 107.9 12.0 103 42-148 3-108 (109)
91 3fs7_A Parvalbumin, thymic; ca 99.9 1.2E-20 4.2E-25 109.3 10.6 102 42-147 4-108 (109)
92 2pvb_A Protein (parvalbumin); 99.8 2.1E-20 7.1E-25 108.1 10.9 101 42-147 4-107 (108)
93 1rwy_A Parvalbumin alpha; EF-h 99.8 1.9E-20 6.6E-25 108.4 10.6 103 42-148 3-108 (109)
94 1djx_A PLC-D1, phosphoinositid 99.8 1.6E-21 5.5E-26 142.0 7.1 132 12-148 12-149 (624)
95 2d8n_A Recoverin; structural g 99.8 3.9E-20 1.3E-24 118.3 11.9 126 20-148 8-135 (207)
96 1pva_A Parvalbumin; calcium bi 99.8 1.9E-20 6.4E-25 108.6 9.4 103 42-148 4-109 (110)
97 1sjj_A Actinin; 3-helix bundle 99.8 6E-21 2E-25 144.1 9.1 136 4-148 718-859 (863)
98 1y1x_A Leishmania major homolo 99.8 3.5E-19 1.2E-23 112.7 15.6 125 11-148 63-189 (191)
99 1qxp_A MU-like calpain; M-calp 99.8 1.9E-21 6.6E-26 147.2 6.0 135 4-147 526-669 (900)
100 2znd_A Programmed cell death p 99.8 4.7E-19 1.6E-23 110.3 15.5 124 12-148 45-170 (172)
101 1rro_A RAT oncomodulin; calciu 99.8 4.5E-20 1.5E-24 106.7 10.1 103 42-148 3-108 (108)
102 3h4s_E KCBP interacting Ca2+-b 99.8 3E-20 1E-24 111.6 6.9 100 49-148 4-105 (135)
103 2l2e_A Calcium-binding protein 99.8 1.9E-18 6.5E-23 109.0 12.7 123 23-148 3-127 (190)
104 3sjs_A URE3-BP sequence specif 99.8 2.9E-18 9.9E-23 110.8 13.0 123 12-148 88-217 (220)
105 2i7a_A Calpain 13; calcium-dep 99.8 4.6E-18 1.6E-22 106.1 13.4 122 11-147 46-172 (174)
106 2kyc_A Parvalbumin-3, parvalbu 99.8 4E-20 1.4E-24 106.9 3.4 102 42-147 3-107 (108)
107 1alv_A Calpain, S-camld; calci 99.8 7E-18 2.4E-22 105.1 12.9 121 11-146 47-167 (173)
108 1fpw_A Yeast frequenin, calciu 99.8 6.2E-18 2.1E-22 106.6 11.4 123 23-148 3-127 (190)
109 1gjy_A Sorcin, CP-22, V19; cal 99.8 2.1E-17 7.2E-22 102.3 13.6 121 11-146 42-164 (167)
110 1k94_A Grancalcin; penta-EF-ha 99.8 2.6E-17 8.9E-22 101.7 13.9 120 11-146 40-159 (165)
111 2ggz_A Guanylyl cyclase-activa 99.8 1.4E-17 4.8E-22 106.9 11.8 127 7-147 53-185 (211)
112 1bjf_A Neurocalcin delta; calc 99.8 1.8E-17 6.2E-22 104.7 11.6 122 23-147 3-126 (193)
113 2zkm_X 1-phosphatidylinositol- 99.8 4.1E-18 1.4E-22 126.9 9.8 130 10-148 145-297 (799)
114 1juo_A Sorcin; calcium-binding 99.8 1E-16 3.6E-21 101.8 14.7 122 11-147 73-196 (198)
115 1qxp_A MU-like calpain; M-calp 99.7 1.7E-17 5.7E-22 125.9 12.6 135 10-147 606-801 (900)
116 1s6c_A KV4 potassium channel-i 99.7 2.1E-17 7.2E-22 103.7 10.7 117 29-148 2-120 (183)
117 1g8i_A Frequenin, neuronal cal 99.7 4.9E-17 1.7E-21 102.5 11.8 122 24-148 4-127 (190)
118 1s1e_A KV channel interacting 99.7 5.6E-17 1.9E-21 105.1 10.2 121 24-147 30-152 (224)
119 1jfj_A Ehcabp, calcium-binding 99.7 5.5E-17 1.9E-21 96.5 7.7 99 50-148 2-103 (134)
120 3a4u_B Multiple coagulation fa 99.7 1.1E-17 3.8E-22 101.3 4.7 96 51-146 30-142 (143)
121 1jba_A GCAP-2, protein (guanyl 99.7 2.7E-16 9.2E-21 100.3 10.7 105 44-148 18-123 (204)
122 2bl0_C Myosin regulatory light 99.7 1.2E-15 4.2E-20 91.7 12.9 101 48-148 6-107 (142)
123 2r2i_A Guanylyl cyclase-activa 99.7 5.5E-16 1.9E-20 98.4 11.8 105 7-112 48-159 (198)
124 2ehb_A Calcineurin B-like prot 99.7 3E-16 1E-20 100.2 10.2 122 22-147 11-138 (207)
125 3ohm_B 1-phosphatidylinositol- 99.7 8.8E-16 3E-20 114.9 13.4 129 11-148 150-301 (885)
126 2lv7_A Calcium-binding protein 99.7 1.7E-16 5.9E-21 90.2 7.2 64 83-146 35-98 (100)
127 1s6j_A CDPK, calcium-dependent 99.7 2.4E-17 8.3E-22 91.5 3.2 86 60-147 1-86 (87)
128 2opo_A Polcalcin CHE A 3; calc 99.7 9.7E-16 3.3E-20 84.8 9.2 75 1-77 1-75 (86)
129 3dd4_A KV channel-interacting 99.7 1.4E-15 4.9E-20 98.7 10.7 111 13-130 104-226 (229)
130 2lv7_A Calcium-binding protein 99.7 1.7E-16 5.8E-21 90.2 5.5 70 4-74 29-98 (100)
131 2jul_A Calsenilin; EF-hand, ca 99.6 8.1E-16 2.8E-20 101.4 9.2 120 25-147 71-192 (256)
132 3bow_A Calpain-2 catalytic sub 99.6 3.5E-15 1.2E-19 110.7 13.0 122 12-147 576-697 (714)
133 2ktg_A Calmodulin, putative; e 99.6 1.5E-15 5E-20 83.9 8.2 79 1-80 4-82 (85)
134 3khe_A Calmodulin-like domain 99.6 1.6E-15 5.4E-20 95.6 9.2 105 43-147 35-150 (191)
135 2jnf_A Troponin C; stretch act 99.6 4.7E-15 1.6E-19 90.7 11.1 100 49-148 14-119 (158)
136 2kld_A Polycystin-2; PC2, PKD2 99.6 2E-17 6.8E-22 97.6 0.3 101 37-148 2-108 (123)
137 1nya_A Calerythrin; EF-hand, m 99.6 6.7E-15 2.3E-19 91.4 11.7 102 47-148 6-130 (176)
138 1eg3_A Dystrophin; EF-hand lik 99.6 3.4E-14 1.2E-18 92.9 15.1 136 10-148 81-242 (261)
139 5pal_A Parvalbumin; calcium-bi 99.6 8.9E-15 3E-19 84.4 11.1 102 3-112 4-108 (109)
140 1dtl_A Cardiac troponin C; hel 99.6 3.3E-15 1.1E-19 91.6 9.7 101 48-148 18-123 (161)
141 3ll8_B Calcineurin subunit B t 99.6 1E-14 3.5E-19 88.8 11.7 104 12-115 39-147 (155)
142 4ds7_A Calmodulin, CAM; protei 99.6 3.8E-15 1.3E-19 89.9 9.8 101 48-148 11-112 (147)
143 2lmt_A Calmodulin-related prot 99.6 1E-14 3.6E-19 88.5 11.4 100 12-111 47-146 (148)
144 1avs_A Troponin C; muscle cont 99.6 3E-15 1E-19 83.5 8.3 76 2-78 11-86 (90)
145 1wy9_A Allograft inflammatory 99.6 1.6E-15 5.5E-20 92.2 7.7 89 7-101 44-132 (147)
146 3fs7_A Parvalbumin, thymic; ca 99.6 5.8E-15 2E-19 85.1 9.7 99 5-111 7-108 (109)
147 3fwb_A Cell division control p 99.6 8.2E-15 2.8E-19 89.8 10.8 101 12-112 60-160 (161)
148 3ox6_A Calcium-binding protein 99.6 6.7E-15 2.3E-19 89.3 10.2 100 49-148 12-116 (153)
149 2obh_A Centrin-2; DNA repair c 99.6 3.4E-15 1.2E-19 90.2 8.7 100 12-111 43-142 (143)
150 3e3r_A Calcyphosin, calcyphosi 99.6 1.4E-15 4.9E-20 96.8 7.2 101 47-147 36-136 (204)
151 2jjz_A Ionized calcium-binding 99.6 2.9E-15 9.8E-20 91.3 8.0 89 7-101 46-134 (150)
152 3pm8_A PFCDPK2, calcium-depend 99.6 1.3E-15 4.3E-20 96.8 6.5 101 48-148 57-157 (197)
153 3h4s_E KCBP interacting Ca2+-b 99.6 9.8E-16 3.3E-20 91.8 5.6 102 13-114 5-107 (135)
154 1m45_A MLC1P, myosin light cha 99.6 1.7E-15 5.7E-20 91.8 6.6 99 50-148 6-111 (148)
155 2sas_A Sarcoplasmic calcium-bi 99.6 8.7E-15 3E-19 91.6 10.1 102 47-148 7-133 (185)
156 2aao_A CDPK, calcium-dependent 99.6 3.4E-15 1.1E-19 92.1 8.1 101 48-148 27-127 (166)
157 3qrx_A Centrin; calcium-bindin 99.6 5.1E-15 1.8E-19 91.5 8.9 102 11-112 64-165 (169)
158 4drw_A Protein S100-A10/annexi 99.6 1.7E-15 6E-20 88.5 6.3 70 7-78 11-85 (121)
159 1s6i_A CDPK, calcium-dependent 99.6 2.8E-15 9.4E-20 94.6 7.7 101 48-148 10-110 (188)
160 1tiz_A Calmodulin-related prot 99.6 4.7E-15 1.6E-19 78.1 7.4 64 85-148 2-65 (67)
161 3akb_A Putative calcium bindin 99.6 7.2E-15 2.5E-19 90.4 9.2 96 15-113 59-161 (166)
162 2f2o_A Calmodulin fused with c 99.6 8.6E-15 2.9E-19 91.3 9.5 102 47-148 10-112 (179)
163 1exr_A Calmodulin; high resolu 99.6 8.9E-15 3E-19 88.7 9.2 100 12-111 47-146 (148)
164 2kn2_A Calmodulin; S MAPK phos 99.6 1.4E-14 4.9E-19 81.0 9.3 86 5-91 3-91 (92)
165 1j7q_A CAVP, calcium vector pr 99.6 6.1E-15 2.1E-19 81.5 7.5 77 1-79 4-83 (86)
166 2kz2_A Calmodulin, CAM; TR2C, 99.6 1E-14 3.5E-19 82.0 8.5 69 80-148 25-93 (94)
167 2mys_C Myosin; muscle protein, 99.6 4.4E-14 1.5E-18 85.4 12.0 100 48-148 8-113 (149)
168 1wdc_C Scallop myosin; calcium 99.6 1.3E-14 4.5E-19 88.6 9.7 100 48-148 9-112 (156)
169 2lhi_A Calmodulin, serine/thre 99.6 1.6E-14 5.6E-19 90.2 10.2 101 48-148 11-112 (176)
170 3k21_A PFCDPK3, calcium-depend 99.6 1.4E-14 4.9E-19 91.5 10.1 100 47-148 51-150 (191)
171 2ccm_A Calexcitin; EF hand, ca 99.6 1.3E-14 4.4E-19 91.5 9.7 101 48-148 12-137 (191)
172 1top_A Troponin C; contractIle 99.6 8.6E-15 3E-19 89.8 8.7 102 12-113 57-161 (162)
173 1rwy_A Parvalbumin alpha; EF-h 99.6 3E-14 1E-18 82.1 10.2 100 5-112 6-108 (109)
174 2joj_A Centrin protein; N-term 99.6 8.2E-15 2.8E-19 79.3 7.3 73 5-78 1-73 (77)
175 2zfd_A Calcineurin B-like prot 99.6 1.8E-14 6.1E-19 93.3 10.0 117 27-147 27-149 (226)
176 1bu3_A Calcium-binding protein 99.6 3.1E-14 1.1E-18 82.1 9.8 99 5-111 7-108 (109)
177 2pvb_A Protein (parvalbumin); 99.6 3.2E-14 1.1E-18 81.9 9.7 95 12-111 10-107 (108)
178 1avs_A Troponin C; muscle cont 99.6 2.5E-14 8.7E-19 79.7 8.9 67 82-148 18-84 (90)
179 2bl0_B Myosin regulatory light 99.6 1.8E-14 6.3E-19 86.8 8.9 101 45-148 2-104 (145)
180 2b1u_A Calmodulin-like protein 99.6 8.2E-15 2.8E-19 78.0 6.5 67 82-148 4-70 (71)
181 1wlz_A DJBP, CAP-binding prote 99.6 2.5E-14 8.7E-19 81.9 8.7 84 64-148 5-88 (105)
182 3u0k_A Rcamp; fluorescent prot 99.6 3.3E-14 1.1E-18 98.3 10.7 100 49-148 303-403 (440)
183 1pva_A Parvalbumin; calcium bi 99.6 5.8E-14 2E-18 81.0 10.2 96 12-112 11-109 (110)
184 3mse_B Calcium-dependent prote 99.6 3.9E-14 1.3E-18 88.7 10.1 98 47-147 38-135 (180)
185 2joj_A Centrin protein; N-term 99.6 1.4E-14 4.7E-19 78.4 7.0 65 84-148 7-71 (77)
186 2opo_A Polcalcin CHE A 3; calc 99.6 2E-14 7E-19 79.4 7.6 65 83-148 10-74 (86)
187 3nso_A Protein S100-A3; EF-han 99.6 1.9E-14 6.5E-19 81.6 7.3 65 84-148 10-81 (101)
188 2ktg_A Calmodulin, putative; e 99.6 3.2E-14 1.1E-18 78.4 8.1 65 84-148 14-78 (85)
189 3qr0_A Phospholipase C-beta (P 99.5 2.3E-14 8E-19 106.8 9.4 123 19-148 163-308 (816)
190 2bec_A Calcineurin B homologou 99.5 4.3E-14 1.5E-18 89.9 9.4 101 13-113 63-184 (202)
191 2kn2_A Calmodulin; S MAPK phos 99.5 6.6E-14 2.2E-18 78.3 8.7 65 84-148 9-73 (92)
192 1rro_A RAT oncomodulin; calciu 99.5 4E-14 1.4E-18 81.5 7.9 100 4-111 5-107 (108)
193 2hpk_A Photoprotein berovin; s 99.5 8E-14 2.7E-18 89.0 10.1 101 48-148 36-156 (208)
194 1k9u_A Polcalcin PHL P 7; poll 99.5 3.5E-14 1.2E-18 77.0 7.2 64 84-148 3-66 (78)
195 1w7j_B Myosin light chain 1; m 99.5 1.1E-14 3.8E-19 88.4 5.7 101 48-148 10-115 (151)
196 3q5i_A Protein kinase; CDPK, m 99.5 3.9E-14 1.3E-18 101.5 9.1 100 48-147 355-462 (504)
197 2pmy_A RAS and EF-hand domain- 99.5 8.4E-14 2.9E-18 77.8 8.5 72 2-76 18-89 (91)
198 3n22_A Protein S100-A2; EF-han 99.5 7.2E-14 2.5E-18 79.0 8.2 65 84-148 11-82 (98)
199 3nyv_A Calmodulin-domain prote 99.5 7.9E-14 2.7E-18 99.4 9.9 102 10-114 381-482 (484)
200 2jjz_A Ionized calcium-binding 99.5 1.2E-14 4.3E-19 88.5 5.0 92 46-147 22-113 (150)
201 1ggw_A Protein (CDC4P); light 99.5 8.8E-14 3E-18 83.4 8.6 97 48-148 5-104 (140)
202 3li6_A Calcium-binding protein 99.5 7.5E-15 2.6E-19 77.1 3.3 62 87-148 3-64 (66)
203 3sg6_A Gcamp2, myosin light ch 99.5 1.9E-14 6.4E-19 101.0 6.2 125 20-148 285-413 (450)
204 1dgu_A Calcium-saturated CIB; 99.5 1.9E-13 6.5E-18 85.6 10.1 98 15-112 64-171 (183)
205 1qv0_A Obelin, OBL; photoprote 99.5 1.6E-13 5.6E-18 86.5 9.6 102 12-113 67-178 (195)
206 2pmy_A RAS and EF-hand domain- 99.5 1E-13 3.4E-18 77.5 7.7 64 84-149 27-90 (91)
207 1uhk_A Aequorin 2, aequorin; E 99.5 1.5E-13 5.3E-18 86.4 9.4 102 12-113 63-174 (191)
208 3lij_A Calcium/calmodulin depe 99.5 3.6E-14 1.2E-18 101.5 7.2 100 48-147 346-453 (494)
209 1c7v_A CAVP, calcium vector pr 99.5 3.4E-14 1.2E-18 77.6 5.5 66 82-148 7-73 (81)
210 2lnk_A Protein S100-A4; EF-han 99.5 9.9E-14 3.4E-18 80.2 7.6 65 84-148 22-93 (113)
211 2l4h_A Calcium and integrin-bi 99.5 2.1E-13 7.2E-18 87.7 9.7 99 14-112 94-202 (214)
212 1fi6_A EH domain protein REPS1 99.5 1.5E-13 5E-18 77.0 7.9 62 84-147 9-70 (92)
213 2ovk_C Myosin catalytic light 99.5 2.5E-13 8.6E-18 83.1 9.6 100 48-148 9-113 (159)
214 3n22_A Protein S100-A2; EF-han 99.5 3.3E-13 1.1E-17 76.3 9.3 73 5-77 5-83 (98)
215 1fi6_A EH domain protein REPS1 99.5 1.7E-13 5.8E-18 76.7 8.0 70 5-77 3-72 (92)
216 3rm1_A Protein S100-B; alpha-h 99.5 1.8E-13 6.2E-18 76.6 8.1 64 84-148 9-80 (92)
217 1j7q_A CAVP, calcium vector pr 99.5 1.6E-13 5.5E-18 75.7 7.7 65 83-148 13-80 (86)
218 2d58_A Allograft inflammatory 99.5 1.9E-13 6.5E-18 78.6 8.1 65 84-148 32-96 (107)
219 1wdc_B Scallop myosin; calcium 99.5 1.8E-12 6.1E-17 79.1 12.9 97 48-148 18-115 (156)
220 3zwh_A Protein S100-A4; Ca-bin 99.5 2.4E-13 8.3E-18 77.5 8.3 65 84-148 13-84 (104)
221 1q80_A SCP, sarcoplasmic calci 99.5 3.2E-13 1.1E-17 83.7 9.6 99 48-148 6-122 (174)
222 1qjt_A EH1, epidermal growth f 99.5 8.5E-14 2.9E-18 78.9 6.2 62 84-147 11-72 (99)
223 4eto_A Protein S100-A4; calciu 99.5 2.4E-13 8.1E-18 76.2 7.8 65 84-148 10-81 (93)
224 3nso_A Protein S100-A3; EF-han 99.5 2.5E-13 8.5E-18 77.0 7.9 72 6-77 5-82 (101)
225 2y5i_A S100Z, S100 calcium bin 99.5 3.1E-13 1.1E-17 76.6 8.3 65 84-148 10-81 (99)
226 1qx2_A Vitamin D-dependent cal 99.5 7.4E-14 2.5E-18 75.2 5.5 66 83-148 4-73 (76)
227 1c07_A Protein (epidermal grow 99.5 1.3E-13 4.4E-18 77.6 6.7 63 83-147 9-71 (95)
228 3a4u_B Multiple coagulation fa 99.5 3.5E-14 1.2E-18 85.8 4.5 98 13-110 29-142 (143)
229 3j04_B Myosin regulatory light 99.5 4.2E-13 1.4E-17 80.6 9.1 97 48-148 7-104 (143)
230 1tiz_A Calmodulin-related prot 99.5 1.9E-13 6.4E-18 71.8 6.6 64 12-76 2-65 (67)
231 3i5g_C Myosin catalytic light 99.5 4.6E-13 1.6E-17 82.3 9.1 99 49-148 10-113 (159)
232 1yx7_A Calsensin, LAN3-6 antig 99.5 9.1E-14 3.1E-18 76.2 5.4 65 83-147 6-76 (83)
233 3mwu_A Calmodulin-domain prote 99.5 7.1E-14 2.4E-18 99.8 6.1 103 10-113 380-482 (486)
234 2lnk_A Protein S100-A4; EF-han 99.5 5.7E-13 1.9E-17 77.0 8.7 72 5-77 16-94 (113)
235 2ct9_A Calcium-binding protein 99.5 5.2E-13 1.8E-17 85.3 9.2 101 14-114 64-184 (208)
236 2mys_B Myosin; muscle protein, 99.5 2E-12 6.9E-17 79.6 11.5 90 24-113 71-160 (166)
237 2kgr_A Intersectin-1; structur 99.5 5E-13 1.7E-17 77.3 8.1 63 83-147 13-75 (111)
238 4drw_A Protein S100-A10/annexi 99.4 1.5E-13 5.2E-18 80.2 5.8 64 84-148 15-83 (121)
239 2d58_A Allograft inflammatory 99.4 7.5E-13 2.6E-17 76.0 8.7 72 4-77 26-97 (107)
240 1xk4_C Calgranulin B; S100 fam 99.4 8.5E-13 2.9E-17 76.6 8.9 88 7-101 8-103 (113)
241 1j55_A S-100P protein; metal b 99.4 3E-13 1E-17 76.1 6.8 65 84-148 9-80 (95)
242 1c07_A Protein (epidermal grow 99.4 2E-13 6.8E-18 76.9 6.0 70 5-77 4-73 (95)
243 2wcb_A Protein S100-A12; calci 99.4 1.9E-13 6.4E-18 76.9 5.9 65 84-148 12-83 (95)
244 1eh2_A EPS15; calcium binding, 99.4 6.4E-13 2.2E-17 76.1 7.8 61 84-147 15-75 (106)
245 1k2h_A S100A1, S-100 protein, 99.4 3.4E-13 1.1E-17 75.5 6.5 65 84-148 9-80 (93)
246 2kgr_A Intersectin-1; structur 99.4 9.3E-13 3.2E-17 76.1 8.3 70 5-77 8-77 (111)
247 2kz2_A Calmodulin, CAM; TR2C, 99.4 1.5E-12 5.2E-17 73.0 9.0 66 9-75 27-92 (94)
248 3rm1_A Protein S100-B; alpha-h 99.4 1.7E-12 5.8E-17 72.6 9.0 71 6-78 4-82 (92)
249 2kyc_A Parvalbumin-3, parvalbu 99.4 3.8E-14 1.3E-18 81.5 2.2 100 4-111 5-107 (108)
250 1iq3_A Ralbp1-interacting prot 99.4 1.2E-13 4E-18 79.7 4.3 65 81-147 19-83 (110)
251 3dtp_E RLC, myosin regulatory 99.4 3.7E-12 1.3E-16 80.7 11.6 96 47-146 56-152 (196)
252 1eh2_A EPS15; calcium binding, 99.4 1.1E-12 3.6E-17 75.2 8.2 69 5-77 9-77 (106)
253 2lvv_A Flagellar calcium-bindi 99.4 8.1E-14 2.8E-18 90.3 4.0 101 48-148 51-161 (226)
254 3a8r_A Putative uncharacterize 99.4 2.6E-12 9E-17 80.3 10.7 105 8-113 59-171 (179)
255 2qac_A Myosin A tail domain in 99.4 2.3E-12 7.9E-17 77.7 9.7 96 49-148 15-112 (146)
256 4eto_A Protein S100-A4; calciu 99.4 2E-12 7E-17 72.3 8.8 72 6-77 5-82 (93)
257 3zwh_A Protein S100-A4; Ca-bin 99.4 2.5E-12 8.6E-17 73.3 9.2 73 6-78 8-86 (104)
258 2y5i_A S100Z, S100 calcium bin 99.4 2.1E-12 7.3E-17 73.1 8.9 70 7-77 6-82 (99)
259 2hps_A Coelenterazine-binding 99.4 9.4E-14 3.2E-18 87.1 3.4 96 15-113 69-167 (186)
260 1yx7_A Calsensin, LAN3-6 antig 99.4 1.4E-13 4.8E-18 75.4 3.7 71 7-78 3-79 (83)
261 2jq6_A EH domain-containing pr 99.4 1.2E-12 4.2E-17 78.1 7.9 63 82-147 49-111 (139)
262 2ovk_B RLC, myosin regulatory 99.4 9.4E-13 3.2E-17 80.0 7.7 96 49-148 17-113 (153)
263 3nxa_A Protein S100-A16; S100 99.4 2.2E-12 7.4E-17 73.1 8.5 65 84-148 11-83 (100)
264 2wcb_A Protein S100-A12; calci 99.4 1.2E-12 4.1E-17 73.6 7.4 71 6-77 7-84 (95)
265 1s6j_A CDPK, calcium-dependent 99.4 2.6E-14 8.9E-19 79.1 0.4 67 5-72 17-83 (87)
266 1wy9_A Allograft inflammatory 99.4 1.5E-12 5E-17 79.0 8.2 64 84-147 48-111 (147)
267 2b1u_A Calmodulin-like protein 99.4 5.7E-13 1.9E-17 70.8 5.5 66 9-75 4-69 (71)
268 2kax_A Protein S100-A5; EF-han 99.4 6.6E-13 2.3E-17 74.3 5.9 64 84-148 10-78 (92)
269 1k9u_A Polcalcin PHL P 7; poll 99.4 1.8E-12 6.2E-17 70.1 7.3 65 11-77 3-67 (78)
270 1k2h_A S100A1, S-100 protein, 99.4 2.1E-12 7.2E-17 72.2 7.8 71 6-77 4-81 (93)
271 1k8u_A S100A6, calcyclin, CACY 99.4 5.8E-13 2E-17 74.0 5.4 65 84-148 10-79 (90)
272 3cs1_A Flagellar calcium-bindi 99.4 1.8E-14 6.1E-19 92.9 -1.0 118 26-147 27-157 (219)
273 1cb1_A Calbindin D9K; calcium- 99.4 3.6E-13 1.2E-17 72.9 4.3 66 83-148 6-75 (78)
274 3nxa_A Protein S100-A16; S100 99.4 7E-12 2.4E-16 71.0 9.8 74 6-79 6-86 (100)
275 1j55_A S-100P protein; metal b 99.4 1.8E-12 6.1E-17 72.9 7.2 71 7-77 5-81 (95)
276 3i5g_B Myosin regulatory light 99.4 5.6E-12 1.9E-16 76.9 10.0 96 49-148 17-113 (153)
277 2h2k_A Protein S100-A13; calci 99.4 1.1E-12 3.7E-17 75.1 6.1 65 84-148 22-90 (106)
278 1wlz_A DJBP, CAP-binding prote 99.4 4.6E-12 1.6E-16 72.4 8.7 69 8-77 21-89 (105)
279 1xk4_A Calgranulin A; S100 fam 99.4 3.4E-13 1.2E-17 75.6 3.7 64 84-147 10-76 (93)
280 1xk4_C Calgranulin B; S100 fam 99.4 3.5E-12 1.2E-16 74.0 7.9 65 84-148 12-84 (113)
281 3li6_A Calcium-binding protein 99.4 2.9E-13 9.9E-18 70.9 2.7 61 14-75 3-63 (66)
282 1qx2_A Vitamin D-dependent cal 99.4 1.7E-12 5.8E-17 69.8 5.7 67 10-77 4-74 (76)
283 1c7v_A CAVP, calcium vector pr 99.4 7E-13 2.4E-17 72.3 4.1 68 7-76 5-73 (81)
284 2kax_A Protein S100-A5; EF-han 99.3 3.4E-12 1.2E-16 71.3 6.3 72 6-77 5-79 (92)
285 1iq3_A Ralbp1-interacting prot 99.3 2.5E-13 8.5E-18 78.4 1.6 70 5-77 16-85 (110)
286 2h2k_A Protein S100-A13; calci 99.3 2.6E-12 9E-17 73.5 5.5 72 7-78 18-92 (106)
287 1qjt_A EH1, epidermal growth f 99.3 1.8E-12 6E-17 73.4 4.7 67 8-77 8-74 (99)
288 1a4p_A S100A10; S100 family, E 99.3 2.1E-12 7.3E-17 72.7 5.0 64 84-148 9-77 (96)
289 1k8u_A S100A6, calcyclin, CACY 99.3 3.8E-12 1.3E-16 70.6 5.9 70 7-77 6-80 (90)
290 1snl_A Nucleobindin 1, calnuc; 99.3 9.3E-12 3.2E-16 71.0 7.4 64 85-148 21-100 (103)
291 1qls_A S100C protein, calgizza 99.3 6.8E-12 2.3E-16 70.9 6.5 77 1-77 1-85 (99)
292 1xk4_A Calgranulin A; S100 fam 99.3 2.6E-12 8.8E-17 72.0 4.7 70 7-77 6-78 (93)
293 1psr_A Psoriasin, S100A7; EF-h 99.3 1.2E-12 4.3E-17 74.2 3.1 63 84-147 10-79 (100)
294 1qls_A S100C protein, calgizza 99.3 5.1E-12 1.7E-16 71.4 5.6 64 84-147 13-83 (99)
295 1h8b_A ACT-EF34, alpha-actinin 99.3 2.7E-11 9.3E-16 64.7 7.3 59 82-148 8-71 (75)
296 3fia_A Intersectin-1; EH 1 dom 99.3 1.7E-11 5.8E-16 71.1 6.9 62 83-147 32-93 (121)
297 2jq6_A EH domain-containing pr 99.3 1.7E-11 5.8E-16 73.1 7.1 67 7-77 47-113 (139)
298 1djx_A PLC-D1, phosphoinositid 99.3 1.8E-12 6.1E-17 94.8 3.2 97 47-147 10-106 (624)
299 1cb1_A Calbindin D9K; calcium- 99.3 5.9E-12 2E-16 67.9 4.6 69 9-77 5-76 (78)
300 1psr_A Psoriasin, S100A7; EF-h 99.3 7.6E-12 2.6E-16 71.0 5.2 71 6-77 5-81 (100)
301 1a4p_A S100A10; S100 family, E 99.3 1.7E-11 6E-16 68.9 6.2 70 7-77 5-78 (96)
302 3fia_A Intersectin-1; EH 1 dom 99.2 5.3E-11 1.8E-15 69.1 7.6 69 5-77 27-95 (121)
303 1eg3_A Dystrophin; EF-hand lik 99.2 3.2E-10 1.1E-14 74.3 11.1 95 14-112 135-242 (261)
304 1sjj_A Actinin; 3-helix bundle 99.2 8.1E-11 2.8E-15 89.3 7.5 98 48-146 725-823 (863)
305 1snl_A Nucleobindin 1, calnuc; 99.1 2.9E-10 9.8E-15 64.7 7.0 64 12-75 21-99 (103)
306 1sra_A Sparc; extracellular ma 98.9 5.1E-10 1.7E-14 67.1 1.9 62 84-147 77-139 (151)
307 1h8b_A ACT-EF34, alpha-actinin 98.9 1.5E-08 5.1E-13 54.0 7.0 57 10-75 9-70 (75)
308 3ohm_B 1-phosphatidylinositol- 98.9 2.1E-08 7.1E-13 75.8 10.0 94 47-148 149-251 (885)
309 2kld_A Polycystin-2; PC2, PKD2 98.8 2.2E-10 7.6E-15 67.3 -0.7 84 25-114 22-110 (123)
310 2zkm_X 1-phosphatidylinositol- 98.8 3.5E-09 1.2E-13 79.5 5.5 94 47-148 145-247 (799)
311 3qr0_A Phospholipase C-beta (P 98.5 1.2E-07 4.2E-12 71.2 6.1 87 56-148 163-256 (816)
312 1sra_A Sparc; extracellular ma 98.4 4.6E-07 1.6E-11 54.4 5.6 62 48-111 77-139 (151)
313 1tuz_A Diacylglycerol kinase a 98.4 7E-07 2.4E-11 51.5 6.1 54 25-78 45-107 (118)
314 1tuz_A Diacylglycerol kinase a 98.4 6.3E-07 2.2E-11 51.7 5.4 86 25-113 5-106 (118)
315 1nub_A Basement membrane prote 98.3 1.4E-07 4.8E-12 60.9 1.9 62 84-147 155-217 (229)
316 1nub_A Basement membrane prote 97.8 5.5E-06 1.9E-10 53.5 1.7 62 49-112 156-218 (229)
317 2qpt_A EH domain-containing pr 97.8 0.00012 4E-09 53.3 8.5 62 82-146 456-517 (550)
318 2qpt_A EH domain-containing pr 97.3 0.00072 2.5E-08 49.2 7.0 66 7-76 454-519 (550)
319 1pul_A Hypothetical protein C3 97.2 0.0083 2.8E-07 34.7 8.9 71 7-78 21-94 (125)
320 4dck_A Sodium channel protein 97.0 0.0023 7.9E-08 39.1 5.7 89 4-97 13-114 (168)
321 2kav_A Sodium channel protein 96.9 0.00082 2.8E-08 39.3 3.3 37 4-40 36-72 (129)
322 3tdu_A DCN1-like protein 1; E2 96.6 0.056 1.9E-06 34.1 12.6 66 11-77 4-70 (200)
323 1pul_A Hypothetical protein C3 96.4 0.043 1.5E-06 31.8 8.1 48 99-147 40-91 (125)
324 2jrf_A Tubulin polymerization- 96.2 0.027 9.2E-07 34.9 6.8 67 12-78 9-83 (184)
325 1wlm_A Protein CGI-38; structu 96.2 0.018 6.2E-07 34.6 5.9 67 12-78 16-90 (151)
326 3tdu_A DCN1-like protein 1; E2 95.9 0.039 1.3E-06 34.8 6.6 83 46-129 2-85 (200)
327 1wlm_A Protein CGI-38; structu 95.9 0.084 2.9E-06 31.7 7.7 48 100-147 36-87 (151)
328 2l5y_A Stromal interaction mol 95.9 0.083 2.8E-06 31.6 7.6 79 47-129 14-93 (150)
329 2jrf_A Tubulin polymerization- 95.8 0.085 2.9E-06 32.7 7.8 46 101-146 30-79 (184)
330 3kev_A Galieria sulfuraria DCU 95.8 0.1 3.5E-06 32.8 8.2 84 44-129 3-87 (199)
331 3kev_A Galieria sulfuraria DCU 95.5 0.24 8.2E-06 31.2 14.5 66 11-77 7-72 (199)
332 3bux_B E3 ubiquitin-protein li 95.5 0.33 1.1E-05 32.7 10.0 102 43-148 157-261 (329)
333 3bq3_A Defective in cullin ned 95.5 0.31 1E-05 32.3 13.7 134 10-146 73-233 (270)
334 4gba_A DCN1-like protein 3; E3 95.3 0.3 1E-05 31.2 13.3 67 10-77 5-71 (221)
335 4gba_A DCN1-like protein 3; E3 95.1 0.17 5.9E-06 32.4 7.6 72 46-118 4-76 (221)
336 4fl4_A Glycoside hydrolase fam 95.1 0.069 2.4E-06 28.9 4.9 54 58-111 24-77 (88)
337 2kav_A Sodium channel protein 94.6 0.03 1E-06 32.7 3.0 63 84-147 43-109 (129)
338 4fl4_A Glycoside hydrolase fam 94.5 0.043 1.5E-06 29.8 3.3 50 93-144 23-74 (88)
339 2l5y_A Stromal interaction mol 94.5 0.3 1E-05 29.2 7.1 60 10-74 14-73 (150)
340 3op0_A Signal transduction pro 94.1 0.83 2.8E-05 30.6 9.2 101 43-147 142-245 (323)
341 4dh2_B Dockerin type 1; cellul 93.7 0.05 1.7E-06 29.1 2.5 55 58-112 9-63 (82)
342 2k60_A Protein (stromal intera 93.6 0.095 3.2E-06 31.4 3.8 30 11-40 15-44 (150)
343 2k60_A Protein (stromal intera 93.6 0.091 3.1E-06 31.4 3.7 81 45-129 12-93 (150)
344 4dh2_B Dockerin type 1; cellul 93.6 0.11 3.8E-06 27.7 3.7 54 21-75 9-62 (82)
345 3bq3_A Defective in cullin ned 93.4 0.54 1.8E-05 31.1 7.4 62 84-147 74-136 (270)
346 2y3n_B Cellulosomal family-48 92.6 0.5 1.7E-05 24.4 5.2 21 91-111 38-58 (71)
347 3ul4_B Cellulosome enzyme, doc 92.2 0.42 1.4E-05 24.2 4.6 20 21-40 7-26 (65)
348 2y1n_A E3 ubiquitin-protein li 92.2 2.1 7.2E-05 29.9 9.8 102 43-148 133-237 (389)
349 2y3n_B Cellulosomal family-48 91.7 0.62 2.1E-05 24.0 4.9 53 21-79 8-62 (71)
350 4dck_A Sodium channel protein 91.5 0.16 5.6E-06 31.0 2.9 62 84-147 20-86 (168)
351 3ul4_B Cellulosome enzyme, doc 91.4 0.57 2E-05 23.7 4.5 51 58-111 7-57 (65)
352 3op0_A Signal transduction pro 90.8 2.6 8.9E-05 28.3 9.7 82 27-112 162-246 (323)
353 2vn6_B Endoglucanase A; cell a 90.7 0.89 3.1E-05 22.9 5.2 45 21-71 6-50 (64)
354 3bux_B E3 ubiquitin-protein li 90.2 3.1 0.0001 28.1 10.8 82 27-112 177-261 (329)
355 2ccl_B Endo-1,4-beta-xylanase 90.2 1 3.4E-05 22.5 5.6 13 94-106 40-52 (63)
356 2vn6_B Endoglucanase A; cell a 89.0 1.3 4.4E-05 22.2 5.0 50 58-112 6-55 (64)
357 2ccl_B Endo-1,4-beta-xylanase 87.8 1.6 5.4E-05 21.8 6.2 52 21-76 6-58 (63)
358 3kcp_A Cellulosomal-scaffoldin 82.3 0.77 2.6E-05 31.0 2.2 54 58-114 251-304 (321)
359 1daq_A Endoglucanase SS, CELS; 81.5 1.7 5.7E-05 22.4 2.9 46 21-71 8-53 (71)
360 1ldd_A APC2WHB, anaphase promo 79.3 5 0.00017 20.9 4.7 44 70-113 12-57 (74)
361 2m0n_A Putative uncharacterize 77.8 4.4 0.00015 22.9 4.0 55 2-57 38-95 (112)
362 3ol3_A Putative uncharacterize 76.5 8 0.00027 21.7 5.7 27 28-54 66-92 (107)
363 3uo9_A Glutaminase kidney isof 72.3 6.2 0.00021 28.6 4.5 60 87-147 71-135 (534)
364 3uo9_A Glutaminase kidney isof 70.0 24 0.00081 25.8 6.9 60 15-76 72-136 (534)
365 2y1n_A E3 ubiquitin-protein li 68.9 27 0.00093 24.5 10.5 84 26-113 152-238 (389)
366 2keb_A DNA polymerase subunit 67.9 11 0.00038 20.8 3.9 24 101-124 26-49 (101)
367 3kcp_A Cellulosomal-scaffoldin 66.2 3.6 0.00012 27.9 2.2 49 21-73 251-299 (321)
368 4fqn_A Malcavernin; helical do 65.0 12 0.00043 20.4 3.8 9 101-109 48-56 (98)
369 1wfx_A Probable RNA 2'-phospho 63.2 21 0.0007 22.2 5.1 36 95-131 24-61 (186)
370 3iz5_v 60S acidic ribosomal pr 59.2 22 0.00075 20.1 4.4 42 89-130 6-47 (113)
371 2lky_A Uncharacterized protein 56.7 12 0.00041 21.1 2.9 30 28-58 25-54 (112)
372 2kvc_A Putative uncharacterize 52.9 15 0.00051 20.4 2.9 30 28-58 23-52 (103)
373 1u5t_A Appears to BE functiona 49.7 50 0.0017 21.3 9.1 35 9-44 35-74 (233)
374 2oy9_A UPF0223 protein BH2638; 48.6 24 0.00082 19.3 3.2 50 8-57 16-65 (98)
375 1q87_A 39 kDa initiator bindin 48.1 50 0.0017 20.9 7.0 67 50-116 39-108 (221)
376 2h5n_A Hypothetical protein PG 47.2 39 0.0013 19.4 8.1 79 24-109 31-109 (133)
377 1b4a_A Arginine repressor; hel 47.1 43 0.0015 19.9 4.7 34 97-130 16-49 (149)
378 2lbf_B 60S acidic ribosomal pr 46.6 29 0.00099 17.7 3.9 35 96-130 14-48 (70)
379 2w6a_A ARF GTPase-activating p 42.3 15 0.0005 18.0 1.6 12 134-145 7-18 (63)
380 1m1e_B ICAT; cell adhesion, cy 40.1 42 0.0014 17.7 3.3 21 105-125 21-41 (81)
381 4e2i_2 DNA polymerase alpha su 39.8 42 0.0014 17.6 4.1 29 101-129 3-31 (78)
382 3izc_v 60S acidic ribosomal pr 36.5 57 0.0019 18.2 4.3 30 101-130 17-46 (106)
383 3nw0_A Non-structural maintena 36.1 25 0.00085 22.7 2.4 56 2-57 90-145 (238)
384 2k5c_A Uncharacterized protein 35.7 27 0.00093 18.4 2.0 26 114-140 63-88 (95)
385 1bax_A M-PMV MA, M-PMV matrix 33.1 62 0.0021 17.6 4.3 10 85-94 30-39 (94)
386 2pjp_A Selenocysteine-specific 32.7 31 0.0011 19.4 2.3 12 63-74 79-90 (121)
387 2kzs_A Death-associated protei 32.4 50 0.0017 17.8 2.7 45 67-112 17-61 (94)
388 4dra_E Centromere protein X; D 32.0 61 0.0021 17.2 6.5 66 44-110 12-77 (84)
389 3dxl_A Allergen AED A 2; odora 30.4 97 0.0033 20.9 4.6 56 88-147 195-252 (303)
390 2k6x_A Sigma-A, RNA polymerase 30.0 41 0.0014 17.0 2.2 32 25-59 21-54 (72)
391 3a1y_A 50S ribosomal protein P 29.5 55 0.0019 15.9 5.5 31 100-130 16-46 (58)
392 2jg6_A DNA-3-methyladenine gly 29.0 37 0.0013 21.1 2.2 46 10-56 53-98 (186)
393 3keo_A Redox-sensing transcrip 28.6 35 0.0012 21.6 2.1 72 1-78 3-79 (212)
394 2ofk_A 3-methyladenine DNA gly 28.3 12 0.0004 23.3 -0.1 42 84-125 54-95 (183)
395 1nkz_B Light-harvesting protei 26.7 41 0.0014 15.2 1.6 15 4-18 2-16 (41)
396 3lap_A Arginine repressor; arg 26.6 1.1E+02 0.0039 18.6 4.3 31 100-130 34-64 (170)
397 3nhi_A D7 protein; all helical 26.5 1.2E+02 0.0042 20.3 4.5 85 43-130 131-234 (296)
398 2lbf_A 60S acidic ribosomal pr 26.5 71 0.0024 16.2 3.9 41 88-130 12-52 (69)
399 2hiy_A Hypothetical protein; C 26.0 49 0.0017 20.4 2.4 26 90-115 11-36 (183)
400 3cuq_A Vacuolar-sorting protei 25.6 78 0.0027 20.5 3.3 35 25-59 92-129 (234)
401 2yik_A Endoglucanase; hydrolas 25.4 15 0.00051 27.4 0.0 48 93-143 548-596 (611)
402 3kfu_G Glutamyl-tRNA(Gln) amid 25.3 86 0.0029 16.8 3.8 29 100-128 5-33 (92)
403 1nha_A TFIIF-alpha, transcript 25.2 84 0.0029 16.6 2.9 16 97-112 15-30 (82)
404 2lz1_A Nuclear factor erythroi 24.8 89 0.0031 16.8 2.9 8 25-32 18-25 (90)
405 3h0l_C Glutamyl-tRNA(Gln) amid 24.7 89 0.0031 16.7 3.8 28 101-128 2-29 (94)
406 1c52_A Cytochrome-C552; electr 23.8 1E+02 0.0036 17.2 5.7 48 4-55 74-126 (131)
407 3b0b_C CENP-X, centromere prot 23.5 91 0.0031 16.4 6.1 15 96-110 59-73 (81)
408 1lva_A Selenocysteine-specific 23.5 1.6E+02 0.0053 19.1 5.1 12 26-37 215-226 (258)
409 3v2l_A AGAP005208-PA; odorant 23.4 1E+02 0.0034 16.8 4.4 83 7-92 3-88 (120)
410 2krk_A 26S protease regulatory 22.9 92 0.0031 16.2 3.3 12 100-111 68-79 (86)
411 1s29_A LA protein; winged heli 22.5 1E+02 0.0035 16.6 3.0 36 19-55 36-71 (92)
412 3ip4_C Aspartyl/glutamyl-tRNA( 21.8 1.1E+02 0.0037 16.6 3.8 28 100-127 3-30 (100)
413 1dx7_A Light-harvesting protei 21.7 64 0.0022 15.1 1.8 15 4-18 10-24 (48)
414 3nph_B Phycobilisome 32.1 kDa 21.1 54 0.0019 19.5 1.8 14 134-147 47-60 (148)
415 1lgh_B LH II, B800/850, light 20.9 63 0.0022 14.9 1.7 15 4-18 7-21 (45)
416 3v4g_A Arginine repressor; vib 20.8 1.6E+02 0.0054 18.2 4.2 31 100-130 47-78 (180)
417 3kw6_A 26S protease regulatory 20.8 94 0.0032 15.6 4.0 12 100-111 60-71 (78)
No 1
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=100.00 E-value=1.3e-32 Score=168.19 Aligned_cols=146 Identities=50% Similarity=0.903 Sum_probs=136.6
Q ss_pred CchhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc
Q 032008 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE 80 (149)
Q Consensus 1 ~~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 80 (149)
|+ .|+++++++++.+|..+|.+++|.|+.+||..++... +..++..++..++..++.+++|.|++.+|+..+......
T Consensus 1 Ms-~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 78 (148)
T 2lmt_A 1 MS-ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTL-GQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRE 78 (148)
T ss_dssp CC-SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHH-TCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTT
T ss_pred CC-CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhc-CCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcc
Confidence 44 5899999999999999999999999999999999999 999999999999999999999999999999988766554
Q ss_pred C-cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 81 N-VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 81 ~-~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
. ..+.+..+|+.+|.+++|+|+.+||+.++..+|..++++++..++..+|.|++|.|+|+||+++|.+
T Consensus 79 ~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 79 TDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp TTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred cCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 3 3478999999999999999999999999999999999999999999999999999999999999864
No 2
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-32 Score=170.34 Aligned_cols=145 Identities=48% Similarity=0.834 Sum_probs=135.3
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 81 (149)
++.|+++++++++.+|..+|.+++|.|+.+||..++..+ |..++..++..++..++.+++|.|++.+|+..+.......
T Consensus 2 a~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~l-g~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~ 80 (176)
T 2lhi_A 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN 80 (176)
T ss_dssp CCCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHH-TCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSS
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHc-CCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccC
Confidence 457899999999999999999999999999999999999 9999999999999999999999999999999887665544
Q ss_pred c-HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 V-SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~-~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
. .+.+..+|+.+|.+++|+|+.+||+.++..+|..++++++..++..+| |++|.|+|+||+++|.+
T Consensus 81 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 3 378999999999999999999999999999999999999999999999 99999999999999863
No 3
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.98 E-value=8e-31 Score=160.47 Aligned_cols=147 Identities=39% Similarity=0.701 Sum_probs=136.9
Q ss_pred CchhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc
Q 032008 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE 80 (149)
Q Consensus 1 ~~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 80 (149)
|++.+++++++++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..++.+++|.|++.+|+..+......
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~ 79 (153)
T 3ox6_A 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTM-GYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLA 79 (153)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHT-TCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTT
T ss_pred CcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhc
Confidence 6788999999999999999999999999999999999999 999999999999999999999999999999998765554
Q ss_pred Cc-----HHHHHHHhhhhcCCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 81 NV-----SEELKEAFKVFDRDQDGFISAAELRNVMMN-LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 81 ~~-----~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.. .+.+..+|+.+|.+++|+|+.+||..++.. .|..++++++..++..+|.+++|.|+|+||+.++.+
T Consensus 80 ~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~k 153 (153)
T 3ox6_A 80 ETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153 (153)
T ss_dssp CCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTCC
T ss_pred cccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhC
Confidence 43 367899999999999999999999999999 899999999999999999999999999999998753
No 4
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.97 E-value=1.2e-30 Score=158.78 Aligned_cols=146 Identities=47% Similarity=0.831 Sum_probs=133.8
Q ss_pred CchhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc
Q 032008 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE 80 (149)
Q Consensus 1 ~~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 80 (149)
|+..+++.+++++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..++.+++|.|++.+|+..+......
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~ 79 (147)
T 4ds7_A 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSL-GLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKC 79 (147)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHh-CCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccC
Confidence 6778999999999999999999999999999999999998 999999999999999999999999999999998765443
Q ss_pred -CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 81 -NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 81 -~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
...+.+..+|+.+|.+++|.|+.+||..++..+|..++++++..++..+| +++|.|+|+||++++.+
T Consensus 80 ~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~k 147 (147)
T 4ds7_A 80 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLSK 147 (147)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHhC
Confidence 33378899999999999999999999999999999999999999999999 99999999999998764
No 5
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.97 E-value=1.8e-30 Score=158.56 Aligned_cols=145 Identities=63% Similarity=1.022 Sum_probs=133.8
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-C
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-N 81 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~ 81 (149)
..++++++++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++.+|+..+...... .
T Consensus 2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 80 (148)
T 1exr_A 2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD 80 (148)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-TCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCC
Confidence 46889999999999999999999999999999999999 999999999999999999999999999999988655432 2
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+|++.++..+|..++++++..++..+|.|++|.|+|+||+.++.+
T Consensus 81 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 3367889999999999999999999999999999999999999999999999999999999998864
No 6
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.97 E-value=3.6e-31 Score=163.47 Aligned_cols=144 Identities=30% Similarity=0.528 Sum_probs=129.9
Q ss_pred hhhhHHHHHHHHHHHhhhcC--CCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc
Q 032008 3 DALTEDQIAEFQEAFCMIDK--DSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE 80 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~--~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 80 (149)
++|+++++++++.+|..+|. +++|.|+..+|..+|+.+ |..++..++..++. .+.+++|.|+|.+|+.++......
T Consensus 1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~l-G~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~ 78 (159)
T 3i5g_C 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCL-GMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSK 78 (159)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHT-TCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHc-CCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcc
Confidence 47899999999999999995 899999999999999999 99999999988764 467789999999999998766543
Q ss_pred ---CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCc--CCCCceeHHHHHHHHhc
Q 032008 81 ---NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADL--DGDGLVSFEEFARMMMA 148 (149)
Q Consensus 81 ---~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~--~~~g~i~~~ef~~~l~~ 148 (149)
...+.+..+|+.+|.+++|+|+.+||+.++..+|.+++++++..++..+|. |++|.|+|+||+++|..
T Consensus 79 ~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~ 151 (159)
T 3i5g_C 79 DTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp CTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence 344789999999999999999999999999999999999999999999985 78899999999998763
No 7
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.97 E-value=9.1e-31 Score=179.82 Aligned_cols=145 Identities=62% Similarity=1.015 Sum_probs=133.2
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC-
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN- 81 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~- 81 (149)
.+|+++++++++++|..+|.+++|.|+.+||..+|+.+ +..++..++..++..+|.+++|.|+|+||+.++.......
T Consensus 294 E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsL-G~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d 372 (440)
T 3u0k_A 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTD 372 (440)
T ss_dssp BCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred hhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999999999 9999999999999999999999999999999887655443
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+||+.++..+|..++++++..++..+|.|++|.|+|+||+++|++
T Consensus 373 ~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp -CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence 3378999999999999999999999999999999999999999999999999999999999999863
No 8
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.97 E-value=9.5e-31 Score=159.02 Aligned_cols=141 Identities=48% Similarity=0.746 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC-cHH
Q 032008 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN-VSE 84 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~-~~~ 84 (149)
+++++++++.+|..+|.+++|.|+.++|..++..+ |..++..++..++..+|.+++|.|++++|+..+....... ..+
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 79 (143)
T 2obh_A 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL-GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKE 79 (143)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHT-TCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHH
Confidence 46788999999999999999999999999999999 9999999999999999999999999999999886544332 236
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.+..+|+.+|.+++|+|+.+|++.++..+|..++++++..++..+|.|++|.|+|+||+.++.
T Consensus 80 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 80 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 789999999999999999999999999999999999999999999999999999999999875
No 9
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.97 E-value=9.1e-30 Score=157.10 Aligned_cols=145 Identities=36% Similarity=0.596 Sum_probs=135.5
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-C
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-N 81 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~ 81 (149)
..+++.+++++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++.+|+..+...... .
T Consensus 15 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 93 (161)
T 3fwb_A 15 SELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKAL-GFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRD 93 (161)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999999999998 999999999999999999999999999999998765443 3
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+||..++..+|..++++++..++..+|.+++|.|+|+||++++.+
T Consensus 94 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 3478999999999999999999999999999999999999999999999999999999999998864
No 10
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.97 E-value=6.2e-30 Score=157.55 Aligned_cols=145 Identities=32% Similarity=0.601 Sum_probs=135.3
Q ss_pred hhhhHHHHHHHHHHHhhhc-CCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-
Q 032008 3 DALTEDQIAEFQEAFCMID-KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE- 80 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d-~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~- 80 (149)
..++++++++++.+|..+| .+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++.+|+..+......
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~ 83 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVL-GIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEE 83 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHT-TCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc
Confidence 4689999999999999999 9999999999999999998 999999999999999999999999999999999776544
Q ss_pred ----CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 81 ----NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 81 ----~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.....+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|.|++|.|+|+||++++.+
T Consensus 84 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 84 VNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155 (158)
T ss_dssp CCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred cchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 33467999999999999999999999999999999999999999999999999999999999998764
No 11
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.97 E-value=1.2e-29 Score=157.87 Aligned_cols=144 Identities=45% Similarity=0.717 Sum_probs=133.7
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC-c
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN-V 82 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~-~ 82 (149)
.+++.+++++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++++|+..+....... .
T Consensus 21 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 99 (169)
T 3qrx_A 21 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRAL-GFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS 99 (169)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHT-SCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence 4788999999999999999999999999999999999 9999999999999999999999999999999987654433 2
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+.+..+|+.+|.+++|+|+.+||..++..+|..++++++..++..+|.|++|.|+++||++++.+
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 367899999999999999999999999999999999999999999999999999999999999864
No 12
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.97 E-value=6.6e-30 Score=157.80 Aligned_cols=146 Identities=38% Similarity=0.717 Sum_probs=134.0
Q ss_pred chhhhHHHHHHHHHHHhhhcCCC-CCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc-
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDS-DGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK- 79 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~- 79 (149)
+..+++.+++++..+|..+|.++ +|.|+.++|..++..+ +..++..++..++..+|.+++|.|++.+|+..+.....
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~ 87 (161)
T 1dtl_A 9 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD 87 (161)
T ss_dssp GGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred HhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcc
Confidence 45689999999999999999999 9999999999999999 89999999999999999999999999999999877653
Q ss_pred ---cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 80 ---ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 80 ---~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
....+.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|.|++|.|+++||+.++.+
T Consensus 88 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp ----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred cccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 334478999999999999999999999999999999999999999999999999999999999999865
No 13
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.97 E-value=8.2e-30 Score=159.98 Aligned_cols=147 Identities=64% Similarity=1.030 Sum_probs=130.4
Q ss_pred CchhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc
Q 032008 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE 80 (149)
Q Consensus 1 ~~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 80 (149)
|+..+++++++++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|+++||+..+......
T Consensus 1 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~ 79 (179)
T 2f2o_A 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79 (179)
T ss_dssp -----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccC
Confidence 5678999999999999999999999999999999999998 999999999999999999999999999999988765433
Q ss_pred -CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 81 -NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 81 -~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
...+.+..+|+.+|.+++|+|+.+||..++...|..++++++..++..+|.|++|.|+++||+.++..
T Consensus 80 ~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 148 (179)
T 2f2o_A 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148 (179)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC
T ss_pred cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 23367899999999999999999999999999999999999999999999999999999999998753
No 14
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.97 E-value=1.5e-29 Score=156.30 Aligned_cols=146 Identities=43% Similarity=0.775 Sum_probs=135.2
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 81 (149)
+..+++++++++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++.+|+..+.......
T Consensus 11 ~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 89 (162)
T 1top_A 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED 89 (162)
T ss_dssp HHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHT-TCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence 456899999999999999999999999999999999999 9999999999999999999999999999999887654322
Q ss_pred ----cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 ----VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ----~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
....+..+|+.+|.+++|+|+.+||..++...|..++++++..++..+|.+++|.|+|+||+.++..
T Consensus 90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 3467899999999999999999999999999999999999999999999999999999999999875
No 15
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.97 E-value=1.8e-29 Score=152.89 Aligned_cols=140 Identities=35% Similarity=0.674 Sum_probs=130.0
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc-cCcHH
Q 032008 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK-ENVSE 84 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~~~~~ 84 (149)
++++++++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++++|+..+..... ....+
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 79 (142)
T 2bl0_C 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQF-GVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSED 79 (142)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH-TCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHH
Confidence 35788999999999999999999999999999999 99999999999999999999999999999999876433 34558
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+| +++|.|+++||++++.
T Consensus 80 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 80 ILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 8999999999999999999999999999999999999999999999 9999999999998764
No 16
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.97 E-value=1.4e-29 Score=155.43 Aligned_cols=139 Identities=32% Similarity=0.630 Sum_probs=127.3
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC-c
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN-V 82 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~-~ 82 (149)
.|+++++++++.+|..+|.+++|.|+.++|..+++.+ |..++..++..++. ++++.|++.+|+..+....... .
T Consensus 9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~l-g~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~~~ 83 (153)
T 3i5g_B 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSL-GRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGTDP 83 (153)
T ss_dssp TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHT-TSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTCCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc-CCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhccccc
Confidence 5899999999999999999999999999999999999 99999999888775 4577899999999887665544 4
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+.+..+|+.+|.+++|+|+.+||+.+|..+|.+++++++..++..+|.+ +|.|+|+||+++|.+
T Consensus 84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~ 148 (153)
T 3i5g_B 84 EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK 148 (153)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999987 999999999999864
No 17
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.97 E-value=3.4e-29 Score=153.96 Aligned_cols=143 Identities=36% Similarity=0.594 Sum_probs=133.8
Q ss_pred hhhHHHHHHHHHHHhhhcC--CCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc--
Q 032008 4 ALTEDQIAEFQEAFCMIDK--DSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK-- 79 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~--~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-- 79 (149)
.|+++++++++.+|..+|. +++|.|+.++|..++..+ +..++..++..+ ..+|.+++|.|++.+|+..+.....
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~ 79 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCL-GINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCE 79 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHT-TCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHc-CCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhcc
Confidence 5789999999999999999 999999999999999999 899999999999 9999999999999999999987765
Q ss_pred cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHh--hCcCCCCceeHHHHHHHHhc
Q 032008 80 ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIRE--ADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 80 ~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~--~d~~~~g~i~~~ef~~~l~~ 148 (149)
....+.+..+|+.+|.+++|+|+.+||..++..+|..++++++..++.. +|.+++|.|+|+||+.++.+
T Consensus 80 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 80 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp CCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence 4455889999999999999999999999999999999999999999999 99999999999999998864
No 18
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.97 E-value=4e-30 Score=163.98 Aligned_cols=146 Identities=25% Similarity=0.445 Sum_probs=123.0
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 81 (149)
+..+++++++.+..+|..+|.+++|.|+.+||..++..+ +..++..++..++..+|.+++|.|++.||+..+.......
T Consensus 48 ~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~ 126 (197)
T 3pm8_A 48 AKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI-GYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYL 126 (197)
T ss_dssp HHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-C----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHC
T ss_pred HHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhh
Confidence 356889999999999999999999999999999999999 8889999999999999999999999999998876665555
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh--CCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNL--GERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~--~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+||..++... +..++++++..++..+|.|++|.|+|+||+.+|.+
T Consensus 127 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 127 KKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp SHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 66889999999999999999999999999988 77788999999999999999999999999999874
No 19
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.96 E-value=2.4e-28 Score=148.90 Aligned_cols=141 Identities=26% Similarity=0.613 Sum_probs=130.9
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhc---cCCCCCcccHHHHHHHHHhh--c-
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEV---DFDGNGSIDFLEFLTIMGRK--M- 78 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~---d~~~~g~i~~~ef~~~~~~~--~- 78 (149)
|++.++++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++..+ |.++ |.|++.+|+..+... .
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~ 79 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARAL-GQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNK 79 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccC
Confidence 688999999999999999999999999999999999 9999999999999999 9999 999999999998775 2
Q ss_pred ccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 79 KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 79 ~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.......+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++.. |.+++|.|+|+||+.++.+
T Consensus 80 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 80 DQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred CcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 23344789999999999999999999999999999999999999999999 9999999999999998864
No 20
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.96 E-value=5.2e-29 Score=153.65 Aligned_cols=144 Identities=28% Similarity=0.519 Sum_probs=131.5
Q ss_pred hhhhHHHHHHHHHHHhhhc--CCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc-
Q 032008 3 DALTEDQIAEFQEAFCMID--KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK- 79 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d--~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~- 79 (149)
++|+++++++++.+|..+| .+++|.|+.++|..++..+ |..++..++..++..++.+ +|.|++.+|+.++.....
T Consensus 1 s~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~l-g~~~~~~~~~~l~~~~d~~-~g~i~~~eF~~~~~~~~~~ 78 (159)
T 2ovk_C 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCL-GMNPTEAQVHQHGGTKKMG-EKAYKLEEILPIYEEMSSK 78 (159)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHT-TCCCCHHHHHHTTCCSSTT-SCEEEHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhcCC-CCeEcHHHHHHHHHHHhhc
Confidence 3689999999999999999 9999999999999999999 9999999999999999874 699999999998854322
Q ss_pred --cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH--hhCcCCCCceeHHHHHHHHhc
Q 032008 80 --ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIR--EADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 80 --~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~--~~d~~~~g~i~~~ef~~~l~~ 148 (149)
....+.+..+|+.+|.+++|+|+.+||..++..+|..++++++..++. .+|.|++|.|+|+||++++..
T Consensus 79 ~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 151 (159)
T 2ovk_C 79 DTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp STTCCHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhc
Confidence 234578999999999999999999999999999999999999999999 889999999999999998864
No 21
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.96 E-value=5.1e-29 Score=151.11 Aligned_cols=139 Identities=37% Similarity=0.725 Sum_probs=128.4
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-CcH
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-NVS 83 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~~~ 83 (149)
|+++++++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++.. ++|.|++++|+..+...... ...
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~ 75 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASM-GKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPE 75 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHT-SCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHh-CCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcH
Confidence 578999999999999999999999999999999999 899999999888876 78999999999999865443 345
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|.|++|.|+|+||++++.+
T Consensus 76 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 76 DVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp HHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 88999999999999999999999999999999999999999999999999999999999999864
No 22
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.96 E-value=1.7e-29 Score=153.99 Aligned_cols=139 Identities=22% Similarity=0.491 Sum_probs=125.0
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhc-cCCCCCcccHHHHHHHHHhh------cccC
Q 032008 9 QIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEV-DFDGNGSIDFLEFLTIMGRK------MKEN 81 (149)
Q Consensus 9 ~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~-d~~~~g~i~~~ef~~~~~~~------~~~~ 81 (149)
++++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++..+ |.+++|.|++.+|+..+... ....
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 80 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAI-GYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKA 80 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHT-TCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHh-CCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccc
Confidence 34567789999999999999999999999999 9999999999999999 99999999999999998776 3344
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|.|++|.|+|+||+.++.+
T Consensus 81 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 5588999999999999999999999999999999999999999999999999999999999998864
No 23
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.96 E-value=1.9e-28 Score=155.63 Aligned_cols=146 Identities=22% Similarity=0.357 Sum_probs=124.1
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHH-----HHHHHhcCCCCCHH-----HHHHHHhhccCCCCCcccHHHHH
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLA-----TVIQSAQDEHPRKE-----EVQEMISEVDFDGNGSIDFLEFL 71 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~-----~~l~~~~~~~~~~~-----~~~~~~~~~d~~~~g~i~~~ef~ 71 (149)
+..++++++++++.+|..+|.+++|.|+.+||. .++..+ +..++.. .+..++..+|.+++|.|+++||+
T Consensus 11 ~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~-g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~ 89 (195)
T 1qv0_A 11 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKL-EATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFL 89 (195)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHT-TCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHH
T ss_pred cccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHc-CCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHH
Confidence 344699999999999999999999999999999 677777 7777766 58999999999999999999999
Q ss_pred HHHHhhccc-------CcHHHHH----HHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHH
Q 032008 72 TIMGRKMKE-------NVSEELK----EAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFE 140 (149)
Q Consensus 72 ~~~~~~~~~-------~~~~~~~----~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ 140 (149)
.++...... ...+.++ .+|+.+|.+++|+|+.+||..++..+|..++++++..++..+|.|++|.|+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~ 169 (195)
T 1qv0_A 90 DGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVD 169 (195)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHH
T ss_pred HHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHH
Confidence 988655432 1112343 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc
Q 032008 141 EFARMMMA 148 (149)
Q Consensus 141 ef~~~l~~ 148 (149)
||++++..
T Consensus 170 eF~~~~~~ 177 (195)
T 1qv0_A 170 EMTRQHLG 177 (195)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998865
No 24
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.96 E-value=1.7e-29 Score=154.52 Aligned_cols=143 Identities=30% Similarity=0.604 Sum_probs=122.9
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCC--CCCcccHHHHHHHHHhhcccC
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD--GNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~ 81 (149)
.|+++++++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++..++.+ ++|.|++.+|+..+.......
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~ 81 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRAL-GQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNR 81 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHHHT-TCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccC
Confidence 5889999999999999999999999999999999998 9999999999999999999 999999999999987765422
Q ss_pred ---cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 ---VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ---~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+| +++|.|+|+||++++.+
T Consensus 82 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 82 GQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp ------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred CCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence 2356788999999999999999999999999999999999999999999 99999999999998754
No 25
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.96 E-value=3e-28 Score=157.71 Aligned_cols=139 Identities=18% Similarity=0.247 Sum_probs=129.5
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 81 (149)
...++++++++++++|..+|.+++|.|+.+||..++..+ +..++..++..++..+|.+++|.|+++||+.++...
T Consensus 42 ~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~---- 116 (220)
T 3sjs_A 42 LNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPG-GIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM---- 116 (220)
T ss_dssp GGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGG-GBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH----
T ss_pred HhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----
Confidence 456899999999999999999999999999999999998 899999999999999999999999999999988764
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+| |++|.|+|+||++++..
T Consensus 117 --~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~ 180 (220)
T 3sjs_A 117 --ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAF 180 (220)
T ss_dssp --HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHH
T ss_pred --HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 66899999999999999999999999999999999999999999999 99999999999998753
No 26
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.96 E-value=5.5e-28 Score=151.10 Aligned_cols=142 Identities=22% Similarity=0.350 Sum_probs=128.0
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHH----HHHHhcCCCCCHHHHH-----------HHHhhccCCCCCcccHHH
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLAT----VIQSAQDEHPRKEEVQ-----------EMISEVDFDGNGSIDFLE 69 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~----~l~~~~~~~~~~~~~~-----------~~~~~~d~~~~g~i~~~e 69 (149)
++++++++++.+|..+|.+++|.|+.++|.. ++..+ +..++..++. .+|..+|.+++|.|+++|
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~-g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~E 79 (176)
T 1nya_A 1 TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAF-GKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQ 79 (176)
T ss_dssp CCSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHT-SSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHH
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHc-CCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHH
Confidence 4678899999999999999999999999999 67777 8888888776 888999999999999999
Q ss_pred HHHHHHhhcccCcH--------HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHH
Q 032008 70 FLTIMGRKMKENVS--------EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEE 141 (149)
Q Consensus 70 f~~~~~~~~~~~~~--------~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~e 141 (149)
|+..+......... ..+..+|+.+|.+++|+|+.+||..++..+| ++++++..++..+|.|++|.|+++|
T Consensus 80 f~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~~~~~~~~~D~d~dg~i~~~e 157 (176)
T 1nya_A 80 FIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDE 157 (176)
T ss_dssp HHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred HHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCCCcHHH
Confidence 99998776554432 5689999999999999999999999999988 8999999999999999999999999
Q ss_pred HHHHHhcC
Q 032008 142 FARMMMAF 149 (149)
Q Consensus 142 f~~~l~~~ 149 (149)
|++++..+
T Consensus 158 f~~~~~~~ 165 (176)
T 1nya_A 158 LLTAVRDF 165 (176)
T ss_dssp HHHHHSCC
T ss_pred HHHHHHHH
Confidence 99998753
No 27
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.96 E-value=1.2e-27 Score=148.43 Aligned_cols=141 Identities=31% Similarity=0.538 Sum_probs=129.3
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCC-CCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDE-HPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE- 80 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~- 80 (149)
..+++.+++++..+|..+|.+++|.|+.++|..++..+ +. .++..++..++... +|.|++.+|+.++......
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~ 91 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAM-GRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGA 91 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh-CCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccC
Confidence 36889999999999999999999999999999999999 88 99999999998764 7999999999998766443
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
...+.+..+|+.+|.+++|+|+.+||..++..+|..++++++..++..+|.|++|.|+|+||+.++.+
T Consensus 92 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~ 159 (166)
T 2mys_B 92 DPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 159 (166)
T ss_pred CcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence 34578999999999999999999999999999999999999999999999999999999999998864
No 28
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.96 E-value=1.3e-27 Score=146.96 Aligned_cols=140 Identities=26% Similarity=0.574 Sum_probs=127.4
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-C
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-N 81 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~ 81 (149)
..+++.++++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++. +++|.|++.+|+.++...... .
T Consensus 10 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~ 84 (156)
T 1wdc_B 10 TKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQL-GRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTD 84 (156)
T ss_dssp --CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHH-SSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCC
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCC
Confidence 46889999999999999999999999999999999999 99999999999885 468999999999998765443 3
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+||..++..+|..++++++..++..+|.| +|.|+|+||++++.+
T Consensus 85 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_B 85 SEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 150 (156)
T ss_dssp CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred hHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence 457899999999999999999999999999999999999999999999999 999999999998864
No 29
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.96 E-value=5.4e-28 Score=153.43 Aligned_cols=143 Identities=28% Similarity=0.512 Sum_probs=128.1
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 81 (149)
+..+++++++++..+|..+|.+++|.|+.+||..++..+ +..++ .++..++..+|.+++|.|+++||+..+.... ..
T Consensus 43 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~-g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~ 119 (191)
T 3k21_A 43 AQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKD-GLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QL 119 (191)
T ss_dssp HHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GC
T ss_pred HHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc-CCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hc
Confidence 346788999999999999999999999999999999999 88888 8999999999999999999999999885443 34
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHH--hCCCCCH---HHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMN--LGERLSD---EETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~--~~~~~~~---~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..+.+..+|+.+|.+++|+|+.+|+..++.. .+..+++ +++..++..+|.|++|.|+++||++++.
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 120 SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp CHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 5578999999999999999999999999998 4556766 4689999999999999999999999875
No 30
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.96 E-value=6.7e-28 Score=152.55 Aligned_cols=144 Identities=19% Similarity=0.354 Sum_probs=127.2
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHH-----HHHHHhcCCCCCHH-----HHHHHHhhccCCCCCcccHHHHHHH
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLA-----TVIQSAQDEHPRKE-----EVQEMISEVDFDGNGSIDFLEFLTI 73 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~-----~~l~~~~~~~~~~~-----~~~~~~~~~d~~~~g~i~~~ef~~~ 73 (149)
.++++++++++.+|..+|.+++|.|+.+||. .++..+ +..++.. .+..++..+|.+++|.|+++||+..
T Consensus 9 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~-g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~ 87 (191)
T 1uhk_A 9 FDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNL-GATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEG 87 (191)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHH
T ss_pred cCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHH
Confidence 3578999999999999999999999999999 778777 7777777 6899999999999999999999998
Q ss_pred HHhhccc-------CcHHHHH----HHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHH
Q 032008 74 MGRKMKE-------NVSEELK----EAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142 (149)
Q Consensus 74 ~~~~~~~-------~~~~~~~----~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef 142 (149)
+...... ...+.++ .+|+.+|.+++|+|+.+||..++..+|..++++++..++..+|.|++|.|+++||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF 167 (191)
T 1uhk_A 88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEM 167 (191)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHH
T ss_pred HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 8665332 1112333 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhc
Q 032008 143 ARMMMA 148 (149)
Q Consensus 143 ~~~l~~ 148 (149)
+.++..
T Consensus 168 ~~~~~~ 173 (191)
T 1uhk_A 168 TRQHLG 173 (191)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998865
No 31
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.96 E-value=6e-28 Score=148.00 Aligned_cols=140 Identities=32% Similarity=0.626 Sum_probs=129.1
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-C
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-N 81 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~ 81 (149)
..+++.++++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++..+ +|.|++.+|+.++...... .
T Consensus 8 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~ 82 (153)
T 2ovk_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSL-GRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTD 82 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTTT-TSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTTTCC
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHh-CCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhccCC
Confidence 35889999999999999999999999999999999998 8999999999999887 8999999999988765443 3
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+||..++..+|..++++++..++..+|. ++|.|+|+||++++..
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~~~ 148 (153)
T 2ovk_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIKGK 148 (153)
T ss_dssp CTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHHhc
Confidence 34789999999999999999999999999999999999999999999999 9999999999999864
No 32
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.96 E-value=2.1e-28 Score=151.77 Aligned_cols=144 Identities=32% Similarity=0.601 Sum_probs=124.0
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 81 (149)
+..+++.+++++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++.+|+..+.......
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 96 (166)
T 2aao_A 18 AESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRV-GANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIE 96 (166)
T ss_dssp HHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGG-TCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcc
Confidence 346889999999999999999999999999999999998 8999999999999999999999999999999886544334
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|.|+.+|+..++...| ++++++..++..+|.|++|.|+++||+.++.+
T Consensus 97 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~--~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 161 (166)
T 2aao_A 97 REDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK 161 (166)
T ss_dssp TTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC----------CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 447899999999999999999999999998776 67888999999999999999999999998864
No 33
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.95 E-value=1.1e-27 Score=152.62 Aligned_cols=139 Identities=32% Similarity=0.614 Sum_probs=128.9
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-Cc
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-NV 82 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~~ 82 (149)
.+++.++++++.+|..+|.+++|.|+..+|..++..+ |..++..++..++..+ +|.|+|.+|+.++...... ..
T Consensus 50 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~l-g~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~ 124 (196)
T 3dtp_E 50 MFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSL-GRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDE 124 (196)
T ss_dssp SSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTT-SCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCC
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCc
Confidence 5788999999999999999999999999999999999 8999999999999887 8999999999999765443 34
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
...+..+|+.+|.+++|+|+.+||..++ .+|..++.+++..++..+|.|++|.|+|+||+.+|..
T Consensus 125 ~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 189 (196)
T 3dtp_E 125 EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK 189 (196)
T ss_dssp HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence 5789999999999999999999999999 9999999999999999999999999999999999864
No 34
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.95 E-value=2.1e-27 Score=144.10 Aligned_cols=137 Identities=30% Similarity=0.636 Sum_probs=124.5
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc--ccCc
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM--KENV 82 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~--~~~~ 82 (149)
+++++ ++.+|..+|.+++|.|+.++|..++..+ +..++..++..++.. +++|.|++.+|+..+.... ....
T Consensus 2 ls~~e---l~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~ 74 (145)
T 2bl0_B 2 ASADQ---IQECFQIFDKDNDGKVSIEELGSALRSL-GKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQ 74 (145)
T ss_dssp CCHHH---HHHHHHHHCTTCSSCEEGGGHHHHHHHT-TCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGG
T ss_pred CCHHH---HHHHHHHhCCCCcCccCHHHHHHHHHHh-CCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCccc
Confidence 45555 8999999999999999999999999999 999999999999987 7899999999999987653 3334
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
...+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|.+++|.|+|+||+.++.+
T Consensus 75 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 75 SKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp HHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 478999999999999999999999999999999999999999999999999999999999998763
No 35
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.95 E-value=4.6e-27 Score=148.86 Aligned_cols=145 Identities=21% Similarity=0.283 Sum_probs=128.3
Q ss_pred chhhhHHHHHHHHHHHhhh-cCCCCCCccHHHHHHHHHHhc---CCCCCHHHHHHHH-----------hhccCCCCCccc
Q 032008 2 ADALTEDQIAEFQEAFCMI-DKDSDGLITMKDLATVIQSAQ---DEHPRKEEVQEMI-----------SEVDFDGNGSID 66 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~-d~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~-----------~~~d~~~~g~i~ 66 (149)
+..+++.+.+++..+|..+ |.+++|.|+.+||..++..+. +..++..++..++ ..+|.+++|.|+
T Consensus 3 ~~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~ 82 (191)
T 2ccm_A 3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVT 82 (191)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred hhhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence 3457889999999999999 999999999999999988773 6677778888888 899999999999
Q ss_pred HHHHHHHHHhhcc---------cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCce
Q 032008 67 FLEFLTIMGRKMK---------ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLV 137 (149)
Q Consensus 67 ~~ef~~~~~~~~~---------~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i 137 (149)
++||+..+..... ......+..+|+.+|.+++|+|+.+||..++..+| ++++++..+|..+|.|++|.|
T Consensus 83 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~i 160 (191)
T 2ccm_A 83 KEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLSDGGKTMV 160 (191)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCHHHHHHHHHHHTTTTTSCC
T ss_pred HHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCCc
Confidence 9999998876532 12236789999999999999999999999999887 899999999999999999999
Q ss_pred eHHHHHHHHhc
Q 032008 138 SFEEFARMMMA 148 (149)
Q Consensus 138 ~~~ef~~~l~~ 148 (149)
+++||+.++..
T Consensus 161 ~~~Ef~~~~~~ 171 (191)
T 2ccm_A 161 TREIFARLWTE 171 (191)
T ss_dssp BHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999998865
No 36
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=151.31 Aligned_cols=140 Identities=26% Similarity=0.485 Sum_probs=126.6
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc----
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK---- 79 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~---- 79 (149)
.+++.+++++..+|..+|.+++|.|+.+||..+ ..+ +..++ +..++..+|.+++|.|+++||+..+.....
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~l-g~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~ 96 (202)
T 2bec_A 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GAL-AVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDE 96 (202)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHH-HHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-Hhc-CCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchh
Confidence 478899999999999999999999999999998 666 66655 889999999999999999999999977653
Q ss_pred -------------cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHh----hCcCCCCceeHHH
Q 032008 80 -------------ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLSDEETEQMIRE----ADLDGDGLVSFEE 141 (149)
Q Consensus 80 -------------~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~----~d~~~~g~i~~~e 141 (149)
....+.+..+|+.+|.+++|+|+.+||..++..+ |..++++++..++.. +|.|++|.|+|+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~E 176 (202)
T 2bec_A 97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176 (202)
T ss_dssp HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHH
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHH
Confidence 2334789999999999999999999999999999 999999999999988 9999999999999
Q ss_pred HHHHHhc
Q 032008 142 FARMMMA 148 (149)
Q Consensus 142 f~~~l~~ 148 (149)
|+.++.+
T Consensus 177 F~~~~~~ 183 (202)
T 2bec_A 177 FTKSLEK 183 (202)
T ss_dssp HHHTTTT
T ss_pred HHHHHHH
Confidence 9998764
No 37
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.95 E-value=3.9e-29 Score=158.34 Aligned_cols=143 Identities=33% Similarity=0.590 Sum_probs=129.9
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCc
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENV 82 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 82 (149)
..|+++++++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|+++||+..+........
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~-g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 80 (188)
T 1s6i_A 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV-GSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER 80 (188)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTT-TCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCH
Confidence 46788899999999999999999999999999999998 88999999999999999999999999999998865544334
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+.+..+|+.+|.+++|+|+.+||..++..+| ++++++..++..+|.|++|.|+|+||+.++.+
T Consensus 81 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 144 (188)
T 1s6i_A 81 EENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144 (188)
T ss_dssp CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 46789999999999999999999999999877 67889999999999999999999999998753
No 38
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.95 E-value=5.8e-27 Score=147.34 Aligned_cols=140 Identities=24% Similarity=0.447 Sum_probs=122.9
Q ss_pred hhhh--HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc
Q 032008 3 DALT--EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE 80 (149)
Q Consensus 3 ~~l~--~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 80 (149)
..++ ++++++++.+|..+|.+++|.|+.+||..++..+ +.. ..++..++..+|.+++|.|+++||+..+.....
T Consensus 29 ~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~-g~~--~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~- 104 (180)
T 3mse_B 29 HELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASV-GIK--KWDINRILQALDINDRGNITYTEFMAGCYRWKN- 104 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHT-TCC--HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT-
T ss_pred HHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CCC--HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc-
Confidence 3455 8889999999999999999999999999999988 654 688999999999999999999999988865433
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCC--------CceeHHHHHHHHhc
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD--------GLVSFEEFARMMMA 148 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~--------g~i~~~ef~~~l~~ 148 (149)
...+.+..+|+.+|.+++|+|+.+||..++. +..++++++..++..+|.|++ |.|+|+||+.+|.+
T Consensus 105 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 105 IESTFLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence 2236899999999999999999999999998 667999999999999999888 99999999999875
No 39
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.95 E-value=2e-27 Score=152.50 Aligned_cols=143 Identities=18% Similarity=0.292 Sum_probs=121.7
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCC--CCCHHHHHHHH-------hhccCCCCCcccHHHHHHH
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDE--HPRKEEVQEMI-------SEVDFDGNGSIDFLEFLTI 73 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~--~~~~~~~~~~~-------~~~d~~~~g~i~~~ef~~~ 73 (149)
..|++++++++..+|..+|.+++|.|+.+||..++..+ +. .++.+++..++ ..+|.+++|.|+++||+..
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~-~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~ 106 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRM-RQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEA 106 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHH-HHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-HhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 45788999999999999999999999999999999988 77 89999999999 9999999999999999998
Q ss_pred HH---------hhccc-CcHHH-HHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHH
Q 032008 74 MG---------RKMKE-NVSEE-LKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEF 142 (149)
Q Consensus 74 ~~---------~~~~~-~~~~~-~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef 142 (149)
+. ..... ...+. +..+|+.+|.+++|+|+.+|+..++..+| ++++++..++..+|.|++|.|+++||
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~I~~~EF 184 (208)
T 2hpk_A 107 NRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTEL 184 (208)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTHHHHHHHHHCTTCCSSBCHHHH
T ss_pred HHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 86 22222 22234 78999999999999999999999999988 88889999999999999999999999
Q ss_pred HHHHhc
Q 032008 143 ARMMMA 148 (149)
Q Consensus 143 ~~~l~~ 148 (149)
+.++..
T Consensus 185 ~~~~~~ 190 (208)
T 2hpk_A 185 VHLFRK 190 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998864
No 40
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.95 E-value=6.2e-27 Score=143.53 Aligned_cols=138 Identities=33% Similarity=0.613 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-CcHH
Q 032008 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-NVSE 84 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~~~~ 84 (149)
+++++++++.+|..+|.+++|.|+.++| ..+... +..+ .+..++..+|.+++|.|++.+|+..+...... ...+
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~-~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~ 75 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPEL-QQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ 75 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGG-TTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHH
T ss_pred CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhcc-ccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHH
Confidence 4578999999999999999999999999 555555 4433 78889999999999999999999999876544 4447
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHh----hCcCCCCceeHHHHHHHHhc
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMMN-LGERLSDEETEQMIRE----ADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~----~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+..+|+.+|.+++|+|+.+|+..++.. .|..++.+++..++.. +|.|++|.|+++||++++.+
T Consensus 76 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 144 (155)
T 3ll8_B 76 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG 144 (155)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGG
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 8999999999999999999999999999 6989999999999998 99999999999999999875
No 41
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.95 E-value=5.4e-28 Score=153.03 Aligned_cols=141 Identities=33% Similarity=0.498 Sum_probs=127.6
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhc----------CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHH
Q 032008 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQ----------DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMG 75 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~----------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 75 (149)
++++++++..+|..+|.+++|.|+.+||..++..+. +..++..++..+|..+|.+++|.|+++||+..+.
T Consensus 35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~ 114 (191)
T 3khe_A 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCM 114 (191)
T ss_dssp CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 678889999999999999999999999999998651 3445677899999999999999999999999987
Q ss_pred hhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 76 RKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 76 ~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
........+.+..+|+.+|.+++|+|+.+||..++. +..++++++..++..+|.|++|.|+++||++++.+
T Consensus 115 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 185 (191)
T 3khe_A 115 DKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 185 (191)
T ss_dssp CHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 665556668899999999999999999999999999 88899999999999999999999999999999865
No 42
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.95 E-value=4.1e-27 Score=150.45 Aligned_cols=142 Identities=23% Similarity=0.371 Sum_probs=123.2
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHH
Q 032008 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEE 85 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 85 (149)
...++++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|+++||+..+.........+.
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~ 110 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKL-GLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAV 110 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHHTT-TCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHH
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHc-CCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHH
Confidence 34567788999999999999999999999999999 99999999999999999999999999999999876655555578
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHHHH-------hCCCCCHHHHHHHHHhhCc-CCCCceeHHHHHHHHhc
Q 032008 86 LKEAFKVFDRDQDGFISAAELRNVMMN-------LGERLSDEETEQMIREADL-DGDGLVSFEEFARMMMA 148 (149)
Q Consensus 86 ~~~~f~~~D~~~~g~i~~~e~~~~l~~-------~~~~~~~~~~~~~~~~~d~-~~~g~i~~~ef~~~l~~ 148 (149)
+..+|+.+|.+++|+|+.+||..++.. .|...+++++..++..+|. |++|.|+++||+.++..
T Consensus 111 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~ 181 (204)
T 3e3r_A 111 IAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSG 181 (204)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHH
Confidence 999999999999999999999999984 4666778889999999998 99999999999998864
No 43
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.95 E-value=2.6e-26 Score=160.49 Aligned_cols=144 Identities=63% Similarity=1.025 Sum_probs=131.5
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-Cc
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-NV 82 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~~ 82 (149)
.+++.++++++++|..+|.+++|.|+.+||..++..+ +..++.+++..++..+|.+++|.|+++||+.++...... ..
T Consensus 305 ~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~l-g~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~ 383 (450)
T 3sg6_A 305 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383 (450)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence 5788899999999999999999999999999999998 899999999999999999999999999999998765433 34
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+.+..+|+.+|.+++|+|+.+||+.++..+|..++++++..++..+|.|++|.|+|+||++++..
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 478999999999999999999999999999999999999999999999999999999999998863
No 44
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.95 E-value=2.5e-26 Score=143.36 Aligned_cols=133 Identities=26% Similarity=0.477 Sum_probs=122.8
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcC-CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHH
Q 032008 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQD-EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL 86 (149)
Q Consensus 8 ~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 86 (149)
.+.++++++|..+|.+++|.|+.++|..++..+ + ..++..++..++..+|.+++|.|+++||+..+... ..+
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~ 76 (172)
T 2znd_A 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNG-TWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDW 76 (172)
T ss_dssp --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCS-SSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH------HHH
T ss_pred cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhc-CCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHH
Confidence 456789999999999999999999999999887 5 77899999999999999999999999999987643 678
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 87 KEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 87 ~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|.|++|.|+++||+.++.
T Consensus 77 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 137 (172)
T 2znd_A 77 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI 137 (172)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998875
No 45
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.94 E-value=2.2e-26 Score=143.60 Aligned_cols=138 Identities=25% Similarity=0.348 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcC----CCCCHHH-H--------HHHHhhccCCCCCcccHHHHHH
Q 032008 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQD----EHPRKEE-V--------QEMISEVDFDGNGSIDFLEFLT 72 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~----~~~~~~~-~--------~~~~~~~d~~~~g~i~~~ef~~ 72 (149)
+++++++++.+|..+|.+++|.|+.+||..++..+ + ..++..+ + ..++..+| ++|.|++++|+.
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~-~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~ 77 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERF-AKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFIN 77 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHH-HHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHH-HHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHH
Confidence 46788999999999999999999999999999988 6 7888777 5 35778888 899999999999
Q ss_pred HHHhhcccC-----cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 73 IMGRKMKEN-----VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 73 ~~~~~~~~~-----~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.+....... ....+..+|+.+|.+++|+|+.+|+..++...| ++++++..++..+|.|++|.|+++||+.++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~ 155 (174)
T 1q80_A 78 SMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155 (174)
T ss_dssp HHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--CCGGGHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCceEeHHHHHHHHH
Confidence 987765521 236789999999999999999999999999986 7888999999999999999999999999886
Q ss_pred c
Q 032008 148 A 148 (149)
Q Consensus 148 ~ 148 (149)
.
T Consensus 156 ~ 156 (174)
T 1q80_A 156 D 156 (174)
T ss_dssp H
T ss_pred H
Confidence 4
No 46
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.94 E-value=5.2e-26 Score=140.78 Aligned_cols=137 Identities=23% Similarity=0.330 Sum_probs=119.9
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHH----HHhcCCCCCHHHHHHH-----------HhhccCCCCCcccHHHHHHH
Q 032008 9 QIAEFQEAFCMIDKDSDGLITMKDLATVI----QSAQDEHPRKEEVQEM-----------ISEVDFDGNGSIDFLEFLTI 73 (149)
Q Consensus 9 ~~~~l~~~f~~~d~~~~g~i~~~e~~~~l----~~~~~~~~~~~~~~~~-----------~~~~d~~~~g~i~~~ef~~~ 73 (149)
++++++.+|..+|.+++|.|+.+||..++ ... +..++..++..+ |..+|.+++|.|++++|+..
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~-g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~ 80 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEF-GVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTG 80 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHH-TCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHT
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 46789999999999999999999999974 445 788887777644 79999999999999999998
Q ss_pred HHhhcccCc-------HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHH
Q 032008 74 MGRKMKENV-------SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146 (149)
Q Consensus 74 ~~~~~~~~~-------~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l 146 (149)
+........ .+.+..+|+.+|.+++|+|+.+|+..++..+| ++++++..++..+|.|++|.|+++||+.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~ 158 (166)
T 3akb_A 81 AVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGETEIVPAF 158 (166)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSBCCHHHHHHHH
T ss_pred HHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 876654332 13489999999999999999999999999988 899999999999999999999999999988
Q ss_pred hc
Q 032008 147 MA 148 (149)
Q Consensus 147 ~~ 148 (149)
.+
T Consensus 159 ~~ 160 (166)
T 3akb_A 159 AR 160 (166)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 47
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.94 E-value=8.9e-27 Score=140.75 Aligned_cols=133 Identities=29% Similarity=0.615 Sum_probs=121.2
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC---cHHHH
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN---VSEEL 86 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~---~~~~~ 86 (149)
+++++.+|..+|.+++|.|+.++|..++..+ +..++..++..++. +++|.|++.+|+..+....... ....+
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~ 78 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRAC-GQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEF 78 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHHT-SCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHH
Confidence 4568899999999999999999999999999 89999999999987 7899999999999987665432 23789
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 87 KEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 87 ~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|. ++|.|+|+||+.++.+
T Consensus 79 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 79 VKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999 9999999999998864
No 48
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.94 E-value=8.4e-27 Score=146.69 Aligned_cols=141 Identities=16% Similarity=0.270 Sum_probs=125.7
Q ss_pred hhHHHHHHHHHHHhhh-cCCCCCCccHHHHHHHHHHhcC----CCCCHHHHHHH-----------HhhccCCCCCcccHH
Q 032008 5 LTEDQIAEFQEAFCMI-DKDSDGLITMKDLATVIQSAQD----EHPRKEEVQEM-----------ISEVDFDGNGSIDFL 68 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~-d~~~~g~i~~~e~~~~l~~~~~----~~~~~~~~~~~-----------~~~~d~~~~g~i~~~ 68 (149)
+++.+.+++..+|..+ |.+++|.|+.+||..++..+ + ..++..++..+ |..+|.+++|.|+++
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~ 80 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRY-KEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWE 80 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHH-HHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence 5788899999999999 99999999999999999988 6 78888887755 999999999999999
Q ss_pred HHHHHHHhhccc---------CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeH
Q 032008 69 EFLTIMGRKMKE---------NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSF 139 (149)
Q Consensus 69 ef~~~~~~~~~~---------~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~ 139 (149)
||+..+...... .....+..+|+.+|.+++|+|+.+||..++..+| ++++++..+|..+|.|++|.|++
T Consensus 81 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~i~~ 158 (185)
T 2sas_A 81 EYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKVTFDL 158 (185)
T ss_dssp HHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSSHHHHHHHHHTTTTSCCSH
T ss_pred HHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--CCHHHHHHHHHHhcCCCCCcCcH
Confidence 999988765432 1236789999999999999999999999998877 67888999999999999999999
Q ss_pred HHHHHHHhc
Q 032008 140 EEFARMMMA 148 (149)
Q Consensus 140 ~ef~~~l~~ 148 (149)
+||+.++..
T Consensus 159 ~ef~~~~~~ 167 (185)
T 2sas_A 159 NRYKELYYR 167 (185)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998865
No 49
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.94 E-value=5.1e-26 Score=144.27 Aligned_cols=131 Identities=22% Similarity=0.401 Sum_probs=122.4
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHH
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEA 89 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 89 (149)
.++++++|..+|.+++|.|+.+||..++... +..++..++..++..+|.+++|.|+++||+..+... ..+..+
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~ 98 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAALSSA-GVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREG 98 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBT-TBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHH
Confidence 4678999999999999999999999999665 788999999999999999999999999999988643 678999
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 90 f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|.|++|.|+++||+.++.
T Consensus 99 F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 156 (191)
T 1y1x_A 99 FRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI 156 (191)
T ss_dssp HHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999875
No 50
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.94 E-value=5.2e-26 Score=138.33 Aligned_cols=138 Identities=13% Similarity=0.308 Sum_probs=125.1
Q ss_pred hhhHHHHHHHHHHHhhhcCCC-CCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc-cC
Q 032008 4 ALTEDQIAEFQEAFCMIDKDS-DGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK-EN 81 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~~ 81 (149)
+-..+++++++.+|..+|.++ +|.|+.++|..++..+ |..++..++..++..++.+ |++++|+.++..... ..
T Consensus 7 ~~~~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~ 81 (146)
T 2qac_A 7 IQQLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKL-GLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKD 81 (146)
T ss_dssp HHHHHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcc
Confidence 345567778999999999999 9999999999999999 9999999999999999876 999999999876543 33
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+ |++|.|+|+||+.++.+
T Consensus 82 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~~ 146 (146)
T 2qac_A 82 NVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDILQ 146 (146)
T ss_dssp CHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHTC
T ss_pred hHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHhC
Confidence 457899999999999999999999999999999999999999999999 99999999999998863
No 51
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.94 E-value=3e-27 Score=152.94 Aligned_cols=147 Identities=21% Similarity=0.274 Sum_probs=123.8
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhc---------cCCCCCcccHHHHHH
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEV---------DFDGNGSIDFLEFLT 72 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~---------d~~~~g~i~~~ef~~ 72 (149)
...++++++++++.+|..+|.+++|.|+.+||..++....+..++..++..++..+ +.+++|.|++.+|+.
T Consensus 39 ~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~ 118 (219)
T 3cs1_A 39 PREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLE 118 (219)
T ss_dssp CCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHH
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHH
Confidence 45688999999999999999999999999999999987327776666565544322 237899999999998
Q ss_pred HHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 73 IMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE-RLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 73 ~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
++.........+.+..+|+.+|.+++|+|+.+||..++..+|. .++++++..++..+|.|++|.|+|+||+.++..
T Consensus 119 ~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 195 (219)
T 3cs1_A 119 FRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASA 195 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 8754433334477999999999999999999999999999886 788889999999999999999999999998863
No 52
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.94 E-value=1.8e-25 Score=139.59 Aligned_cols=131 Identities=21% Similarity=0.405 Sum_probs=121.5
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcC-------CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccC
Q 032008 9 QIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQD-------EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 9 ~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~-------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 81 (149)
++++++.+|..+| +++|.|+.+||..++..+.| ..++..++..++..+|.+++|.|+++||+..+...
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~---- 76 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---- 76 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH----
Confidence 5788999999999 99999999999999988733 67889999999999999999999999999888743
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..++ +++|.|+++||+.++.
T Consensus 77 --~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~ 139 (173)
T 1alv_A 77 --KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLV 139 (173)
T ss_dssp --HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHH
T ss_pred --HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999 9999999999998875
No 53
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.94 E-value=4.6e-25 Score=139.54 Aligned_cols=145 Identities=21% Similarity=0.366 Sum_probs=126.5
Q ss_pred hhhHHHHHHHHHH-----------HhhhcCC-CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHH
Q 032008 4 ALTEDQIAEFQEA-----------FCMIDKD-SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71 (149)
Q Consensus 4 ~l~~~~~~~l~~~-----------f~~~d~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~ 71 (149)
.+++++++.+.+. |..+|.+ ++|.|+.++|..++..+.....+...+..+|..+|.+++|.|++.||.
T Consensus 7 ~l~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~ 86 (190)
T 2l2e_A 7 KLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFI 86 (190)
T ss_dssp CSCHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHH
T ss_pred cCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHH
Confidence 4677777776665 9999999 899999999999999883334566789999999999999999999999
Q ss_pred HHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh------------CCCCCHHHHHHHHHhhCcCCCCceeH
Q 032008 72 TIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL------------GERLSDEETEQMIREADLDGDGLVSF 139 (149)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~------------~~~~~~~~~~~~~~~~d~~~~g~i~~ 139 (149)
..+.........+.+..+|+.+|.+++|+|+.+||..++... +...+.+++..+|..+|.|++|.|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~ 166 (190)
T 2l2e_A 87 CALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTL 166 (190)
T ss_dssp HHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCH
T ss_pred HHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcH
Confidence 999877666667899999999999999999999999999872 23467889999999999999999999
Q ss_pred HHHHHHHhc
Q 032008 140 EEFARMMMA 148 (149)
Q Consensus 140 ~ef~~~l~~ 148 (149)
+||+.++..
T Consensus 167 ~Ef~~~~~~ 175 (190)
T 2l2e_A 167 EEFCEGSKR 175 (190)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998864
No 54
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.94 E-value=6e-25 Score=140.56 Aligned_cols=140 Identities=24% Similarity=0.461 Sum_probs=125.1
Q ss_pred HHHHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHH
Q 032008 8 DQIAEFQEAFCMIDKD-SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL 86 (149)
Q Consensus 8 ~~~~~l~~~f~~~d~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 86 (149)
-..+++..+|..+|.+ ++|.|+.++|..++..+ +...+...+..+|..+|.+++|.|+++||+..+.........+.+
T Consensus 19 ~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~ 97 (204)
T 1jba_A 19 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVP-DNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 97 (204)
T ss_dssp HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCC-SSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHh-cCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence 3556678889999999 89999999999999988 778889999999999999999999999999999877766666889
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHh----C------------C-CCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 87 KEAFKVFDRDQDGFISAAELRNVMMNL----G------------E-RLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 87 ~~~f~~~D~~~~g~i~~~e~~~~l~~~----~------------~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|+.+|.+++|+|+.+||..++... | . ..+.+++..+|..+|.|++|.|+++||+.++.+
T Consensus 98 ~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 176 (204)
T 1jba_A 98 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176 (204)
T ss_dssp HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHc
Confidence 999999999999999999999999876 3 1 145678999999999999999999999998864
No 55
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.94 E-value=1.1e-26 Score=151.02 Aligned_cols=145 Identities=18% Similarity=0.302 Sum_probs=121.2
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhc---------cCCCCCcccHHHHHH
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEV---------DFDGNGSIDFLEFLT 72 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~---------d~~~~g~i~~~ef~~ 72 (149)
+..++++++++++.+|..+|.+++|.|+.+||..++....+..++..++..++..+ |.+++|.|++.||+.
T Consensus 42 ~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~ 121 (226)
T 2lvv_A 42 PRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLE 121 (226)
T ss_dssp CSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHH
T ss_pred chhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHH
Confidence 34578899999999999999999999999999994444437777766666666666 999999999999998
Q ss_pred HHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 73 IMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 73 ~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
++.........+.+..+|+.+|.+++|+|+.+||..++..+ |.... ++..++..+|.|++|.|+|+||+.++..
T Consensus 122 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~--e~~~~~~~~D~d~dG~Is~~EF~~~~~~ 198 (226)
T 2lvv_A 122 FRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDIT--DATTVFNEIDTNGSGVVTFDEFSCWAVT 198 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCC--SCHHHHHHHCCSCSSCEEHHHHHHHHHH
T ss_pred HHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHH--HHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 65433333334689999999999999999999999999887 65444 5899999999999999999999998853
No 56
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.94 E-value=5.1e-25 Score=143.34 Aligned_cols=143 Identities=20% Similarity=0.391 Sum_probs=124.6
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcH
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVS 83 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 83 (149)
.+++.+++.+...|.. .+++|.|+.++|..++....+...+...+..+|..+|.+++|.|+++||+..+.........
T Consensus 60 ~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~ 137 (229)
T 3dd4_A 60 KFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQ 137 (229)
T ss_dssp HHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHH
T ss_pred CCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChH
Confidence 4678888888888876 56779999999999999875666777888999999999999999999999999877766667
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHh------------CCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNL------------GERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~------------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+|.+++|+|+.+|+..++..+ +...+++++..+|..+|.|++|.|+++||++++.+
T Consensus 138 ~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 214 (229)
T 3dd4_A 138 EKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214 (229)
T ss_dssp HHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 889999999999999999999999999976 45677789999999999999999999999998764
No 57
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.93 E-value=1e-25 Score=144.56 Aligned_cols=140 Identities=28% Similarity=0.481 Sum_probs=122.5
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc---
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE--- 80 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~--- 80 (149)
.+++.+++++..+|..+|.+++|.|+.+||..++ .+ +..+.. ..++..+|.+++|.|+++||+..+......
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~l-g~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~ 96 (208)
T 2ct9_A 22 GFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-EL-AINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN 96 (208)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HH-HTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-Hc-CCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence 4788999999999999999999999999999965 55 566654 457888899999999999999998765432
Q ss_pred -------------CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHH----HHhhCcCCCCceeHHHH
Q 032008 81 -------------NVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLSDEETEQM----IREADLDGDGLVSFEEF 142 (149)
Q Consensus 81 -------------~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~----~~~~d~~~~g~i~~~ef 142 (149)
...+.+..+|+.+|.+++|+|+.+||..++... |..++++++..+ +..+|.|++|.|+++||
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF 176 (208)
T 2ct9_A 97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176 (208)
T ss_dssp ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHH
T ss_pred hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 144789999999999999999999999999997 999999998888 99999999999999999
Q ss_pred HHHHhc
Q 032008 143 ARMMMA 148 (149)
Q Consensus 143 ~~~l~~ 148 (149)
+.++..
T Consensus 177 ~~~~~~ 182 (208)
T 2ct9_A 177 VKVLEK 182 (208)
T ss_dssp HHTTTT
T ss_pred HHHHhc
Confidence 998754
No 58
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.93 E-value=1e-24 Score=137.22 Aligned_cols=142 Identities=19% Similarity=0.409 Sum_probs=122.8
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCC-CCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCc
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEH-PRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENV 82 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 82 (149)
.+++.+++++...|... +++|.|+.++|..++..+ +.. ++..++..+|..+|.+++|.|++.||+..+........
T Consensus 14 ~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~ 90 (183)
T 1s6c_A 14 NFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQF-FPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 90 (183)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHH-STTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred CCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHH-cCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCH
Confidence 46778888887777765 678999999999999998 554 78999999999999999999999999999987766666
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHh----CCC----CC----HHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNL----GER----LS----DEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~----~~~----~~----~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+.+..+|+.+|.+++|+|+.+||..++..+ |.. ++ .+++..+|..+|.|++|.|+++||+.++.+
T Consensus 91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 168 (183)
T 1s6c_A 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE 168 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 6889999999999999999999999999876 532 33 388999999999999999999999998764
No 59
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.93 E-value=8.7e-26 Score=135.07 Aligned_cols=129 Identities=26% Similarity=0.433 Sum_probs=114.9
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHh---hcccCcHHHHHHH
Q 032008 13 FQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGR---KMKENVSEELKEA 89 (149)
Q Consensus 13 l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~---~~~~~~~~~~~~~ 89 (149)
++++|..+|.+++|.|+.++|..++... +..++..++..++..+|.+++|.|++++|...+.. .........+..+
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~ 80 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVL 80 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTT-CCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHH
Confidence 5788999999999999999999999988 88889999999999999999999999999998852 2222333669999
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHH
Q 032008 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146 (149)
Q Consensus 90 f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l 146 (149)
|+.+|.+++|.|+.+||..++...|... +..++..+|.+++|.|+++||++++
T Consensus 81 f~~~D~d~~G~i~~~e~~~~l~~~~~~~----~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 81 YKLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHCCSSSSEEEHHHHHHHHTTTTCHH----HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHCCCCCCccCHHHHHHHHHHhCHHH----HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 9999999999999999999999877543 8999999999999999999999876
No 60
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.93 E-value=1.7e-24 Score=140.53 Aligned_cols=143 Identities=22% Similarity=0.405 Sum_probs=123.3
Q ss_pred hhhHHHHHHHHHHHhhhcCC--CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-
Q 032008 4 ALTEDQIAEFQEAFCMIDKD--SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE- 80 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~- 80 (149)
.+++.+++++..+|..+|.+ ++|.|+.+||..++.. ........+..+|..+|.+++|.|++.||+..+......
T Consensus 41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~--~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~ 118 (226)
T 2zfd_A 41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNA 118 (226)
T ss_dssp SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS--CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred CCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc--cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCC
Confidence 47889999999999999999 9999999999999875 233444567889999999999999999999998876543
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHH----HhCCCCCHHHHHHH----HHhhCcCCCCceeHHHHHHHHhc
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMM----NLGERLSDEETEQM----IREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~----~~~~~~~~~~~~~~----~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
...+.+..+|+.+|.+++|+|+.+||..++. ..|..++++++..+ |..+|.|++|.|+++||+.++.+
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~ 194 (226)
T 2zfd_A 119 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 194 (226)
T ss_dssp CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 3447899999999999999999999999996 56888888877555 45999999999999999998864
No 61
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.93 E-value=3.4e-26 Score=163.16 Aligned_cols=144 Identities=28% Similarity=0.500 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhc---CCCCC----------HHHHHHHHhhccCCCCCcccHHHHHH
Q 032008 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQ---DEHPR----------KEEVQEMISEVDFDGNGSIDFLEFLT 72 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~---~~~~~----------~~~~~~~~~~~d~~~~g~i~~~ef~~ 72 (149)
++++++++.++|..+|.|++|.|+.+||..++..+. |..++ .+++..+|..+|.+++|.|+++||+.
T Consensus 326 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~ 405 (486)
T 3mwu_A 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIA 405 (486)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHH
Confidence 788999999999999999999999999965544331 55555 78899999999999999999999998
Q ss_pred HHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhcC
Q 032008 73 IMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149 (149)
Q Consensus 73 ~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~ 149 (149)
.+.........+.+..+|+.+|.|++|.|+.+||..++...|..+++++++.++..+|.|++|.|+++||++++.+|
T Consensus 406 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 406 SAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp HHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred HHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 88766666666889999999999999999999999999999999999999999999999999999999999998753
No 62
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.93 E-value=3.8e-25 Score=157.60 Aligned_cols=142 Identities=30% Similarity=0.525 Sum_probs=124.2
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhc---CCCCC-------HHHHHHHHhhccCCCCCcccHHHHHHHH
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQ---DEHPR-------KEEVQEMISEVDFDGNGSIDFLEFLTIM 74 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~---~~~~~-------~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 74 (149)
+++++++++.++|..+|.+++|.|+.+||..++.... |..++ ..++..+|..+|.+++|.|+++||+..+
T Consensus 329 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~ 408 (484)
T 3nyv_A 329 TSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVA 408 (484)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 3778889999999999999999999999965554431 56666 7889999999999999999999999988
Q ss_pred HhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 75 GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 75 ~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.........+.+..+|+.+|.|++|+|+.+||..++.. ..++++++..++..+|.|++|.|+++||++++.+
T Consensus 409 ~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~ 480 (484)
T 3nyv_A 409 MDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred HhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHh
Confidence 76644455578999999999999999999999999987 4589999999999999999999999999999875
No 63
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.93 E-value=2.4e-24 Score=137.99 Aligned_cols=143 Identities=27% Similarity=0.439 Sum_probs=122.9
Q ss_pred hhhHHHHHHHHHHHhhhcCC--CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-
Q 032008 4 ALTEDQIAEFQEAFCMIDKD--SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE- 80 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~--~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~- 80 (149)
.+++.+++++..+|..+|.+ ++|.|+.++|..++.. ........+..+|..+|.+++|.|++.||+..+......
T Consensus 30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~ 107 (207)
T 2ehb_A 30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSA 107 (207)
T ss_dssp SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTS
T ss_pred CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCC
Confidence 46788999999999999999 9999999999999875 234445567889999999999999999999999876543
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHH----HhCCCCCHHHHHHH----HHhhCcCCCCceeHHHHHHHHhc
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMM----NLGERLSDEETEQM----IREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~----~~~~~~~~~~~~~~----~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
...+.+..+|+.+|.+++|+|+.+||..++. ..|..++++++..+ |..+|.|++|.|+++||+.++..
T Consensus 108 ~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 183 (207)
T 2ehb_A 108 PVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL 183 (207)
T ss_dssp CHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 3447799999999999999999999999996 45888888876554 56999999999999999998864
No 64
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.93 E-value=3.3e-25 Score=141.21 Aligned_cols=134 Identities=19% Similarity=0.357 Sum_probs=122.5
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCC-----CCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDE-----HPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK 79 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~-----~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~ 79 (149)
.++.++++++. |..+|.+++|.|+.+||..++..+ +. .++..++..++..+|.+++|.|+++||+..+...
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~l-g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~-- 102 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQS-GIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-- 102 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHH-TTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH--
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH--
Confidence 34556778888 999999999999999999999998 65 6789999999999999999999999999988753
Q ss_pred cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 80 ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 80 ~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+ |++|.|+++||+.++..
T Consensus 103 ----~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~ 165 (198)
T 1juo_A 103 ----NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVK 165 (198)
T ss_dssp ----HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999999 88999999999998753
No 65
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.93 E-value=7.1e-26 Score=142.79 Aligned_cols=146 Identities=16% Similarity=0.284 Sum_probs=123.6
Q ss_pred CchhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh-----cCCCCCHHHHHHH---------HhhccCCCCCccc
Q 032008 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSA-----QDEHPRKEEVQEM---------ISEVDFDGNGSID 66 (149)
Q Consensus 1 ~~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~-----~~~~~~~~~~~~~---------~~~~d~~~~g~i~ 66 (149)
++..++++++++++.+|..+|.+++|.|+.++|..++..+ .+..++..++..+ |..+|.+++|.|+
T Consensus 4 ~~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~ 83 (186)
T 2hps_A 4 ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAV 83 (186)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHH
T ss_pred ccccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCccc
Confidence 3567899999999999999999999999999999998754 2666777888887 5999999999999
Q ss_pred HHHHHHHHHhhcccC-cHHHHHHHh--hhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHH
Q 032008 67 FLEFLTIMGRKMKEN-VSEELKEAF--KVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143 (149)
Q Consensus 67 ~~ef~~~~~~~~~~~-~~~~~~~~f--~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~ 143 (149)
++| .++....... ..+.+..+| +.+|.+++|+|+.+||..++...|..++++++..++..+|.|++|.|+++||+
T Consensus 84 ~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~ 161 (186)
T 2hps_A 84 NAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161 (186)
T ss_dssp HHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred HHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHH
Confidence 999 4444332221 123455555 78899999999999999999999999999999999999999999999999999
Q ss_pred HHHhc
Q 032008 144 RMMMA 148 (149)
Q Consensus 144 ~~l~~ 148 (149)
.++..
T Consensus 162 ~~~~~ 166 (186)
T 2hps_A 162 VTVND 166 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
No 66
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.93 E-value=4.4e-25 Score=158.03 Aligned_cols=142 Identities=32% Similarity=0.517 Sum_probs=128.1
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhc-------CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQ-------DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~-------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
++++++++++++|..+|.|++|.|+.+||..++..+. +..++..++..+|..+|.+++|.|+++||+..+...
T Consensus 349 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 428 (504)
T 3q5i_A 349 TTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDK 428 (504)
T ss_dssp SCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH
T ss_pred CcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhh
Confidence 3788999999999999999999999999999888772 346778899999999999999999999999988766
Q ss_pred cccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 78 MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 78 ~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
......+.+..+|+.+|.|++|+|+.+||..++.. ..++++++..++..+|.|++|.|+++||+.++.+
T Consensus 429 ~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 497 (504)
T 3q5i_A 429 QILFSEERLRRAFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHK 497 (504)
T ss_dssp HHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC--SCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHH
T ss_pred hcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh--CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 55556688999999999999999999999999886 4489999999999999999999999999999865
No 67
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.93 E-value=4.1e-25 Score=140.71 Aligned_cols=141 Identities=26% Similarity=0.471 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhcCCCCCH-HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHH
Q 032008 7 EDQIAEFQEAFCMIDKD-SDGLITMKDLATVIQSAQDEHPRK-EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSE 84 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~-~~g~i~~~e~~~~l~~~~~~~~~~-~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 84 (149)
.-..+++..+|..+|.+ ++|.|+.++|..++... +..+.. ..+..+|..+|.+++|.|++.+|+..+.........+
T Consensus 10 ~~~~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~ 88 (198)
T 2r2i_A 10 ELSATECHQWYKKFMTECPSGQLTLYEFKQFFGLK-NLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQ 88 (198)
T ss_dssp HHHTSCHHHHHHHHHHHCTTSEECHHHHHHHHTCC-SCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHh-CCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHH
Confidence 33445677889999887 89999999999999877 665554 4599999999999999999999999998777666668
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHhC------CCCCHH-HHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLG------ERLSDE-ETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~------~~~~~~-~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+..+|+.+|.+++|+|+.+||..++...+ ...+.+ .+..+|..+|.|++|.|+++||+.++.+
T Consensus 89 ~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 89 KLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp HHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 899999999999999999999999999875 455654 4899999999999999999999998763
No 68
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.93 E-value=4.9e-25 Score=138.74 Aligned_cols=140 Identities=23% Similarity=0.412 Sum_probs=123.0
Q ss_pred hhhHHHHHHHHHHHhhhcC-----CC-C--CCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCc-ccHHHHHHHH
Q 032008 4 ALTEDQIAEFQEAFCMIDK-----DS-D--GLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS-IDFLEFLTIM 74 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~-----~~-~--g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~-i~~~ef~~~~ 74 (149)
.+++.+++++.++|..+|. ++ + |.|+.++|.. +..+ +..++.. .++..+|.+++|. |++.+|+..+
T Consensus 13 ~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~-g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~ 87 (183)
T 1dgu_A 13 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPEL-KANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 87 (183)
T ss_dssp SCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTS-SSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhh-hcCcHHH---HHHHHhCCCCCCCEecHHHHHHHH
Confidence 5889999999999999999 68 8 9999999999 8777 7777765 5677789999999 9999999999
Q ss_pred HhhcccCc-HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCC-----CCCHHHHHH----HHHhhCcCCCCceeHHHHHH
Q 032008 75 GRKMKENV-SEELKEAFKVFDRDQDGFISAAELRNVMMNLGE-----RLSDEETEQ----MIREADLDGDGLVSFEEFAR 144 (149)
Q Consensus 75 ~~~~~~~~-~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~-----~~~~~~~~~----~~~~~d~~~~g~i~~~ef~~ 144 (149)
........ .+.+..+|+.+|.+++|+|+.+|+..++..++. .++++++.. ++..+|.|++|.|+++||+.
T Consensus 88 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~ 167 (183)
T 1dgu_A 88 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 167 (183)
T ss_dssp HHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 87665544 368999999999999999999999999999876 677788775 99999999999999999999
Q ss_pred HHhc
Q 032008 145 MMMA 148 (149)
Q Consensus 145 ~l~~ 148 (149)
++.+
T Consensus 168 ~~~~ 171 (183)
T 1dgu_A 168 VISR 171 (183)
T ss_dssp HHCS
T ss_pred HHHh
Confidence 8764
No 69
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.93 E-value=5.6e-24 Score=132.12 Aligned_cols=124 Identities=20% Similarity=0.373 Sum_probs=115.2
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHhcCC-----CCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHH
Q 032008 15 EAFCMIDKDSDGLITMKDLATVIQSAQDE-----HPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEA 89 (149)
Q Consensus 15 ~~f~~~d~~~~g~i~~~e~~~~l~~~~~~-----~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 89 (149)
+.|..+|.+++|.|+.+||..++..+ +. .++..++..++..+|.+++|.|++.||+..+... +.+..+
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~l-g~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~ 77 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQS-GIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQH 77 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHH-TCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHH
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhh-cccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHH
Confidence 45889999999999999999999998 66 6789999999999999999999999999988654 678999
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 90 f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
|+.+|.+++|+|+.+|+..++..+|..++++++..++..+ +++|.|+++||+.++.
T Consensus 78 F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~ 133 (167)
T 1gjy_A 78 FISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCV 133 (167)
T ss_dssp HHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHH
T ss_pred HHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 8899999999998875
No 70
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.92 E-value=2.3e-25 Score=159.15 Aligned_cols=141 Identities=31% Similarity=0.503 Sum_probs=125.7
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcC-------CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQD-------EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~-------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
+++++++++++|..+|.+++|.|+.+||..++..... ..++..++..+|..+|.+++|.|+++||+..+....
T Consensus 341 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~ 420 (494)
T 3lij_A 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRK 420 (494)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHH
T ss_pred cHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhh
Confidence 7889999999999999999999999999999998832 144578899999999999999999999999887665
Q ss_pred ccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 79 KENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 79 ~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.....+.+..+|+.+|.+++|+|+.+||..++.. ..++++++..++..+|.|++|.|+++||+.++.+
T Consensus 421 ~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 488 (494)
T 3lij_A 421 SLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 488 (494)
T ss_dssp HHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 5556688999999999999999999999999876 5678899999999999999999999999999865
No 71
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.92 E-value=6.5e-24 Score=131.56 Aligned_cols=124 Identities=21% Similarity=0.348 Sum_probs=115.3
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHhcCC-----CCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHH
Q 032008 15 EAFCMIDKDSDGLITMKDLATVIQSAQDE-----HPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEA 89 (149)
Q Consensus 15 ~~f~~~d~~~~g~i~~~e~~~~l~~~~~~-----~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 89 (149)
..|..+|.+++|.|+.+||..++..+ +. .++..++..++..+|.+++|.|+++||+..+... +.+..+
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~l-g~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~ 75 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQS-GINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKEN 75 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHH-TTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHH
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHh-ccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHH
Confidence 45889999999999999999999998 66 6789999999999999999999999999987653 678999
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 90 FKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 90 f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
|+.+|.+++|+|+.+|+..++..+|..++++++..++..+ +++|.|+++||+.++.
T Consensus 76 F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~ 131 (165)
T 1k94_A 76 FMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCV 131 (165)
T ss_dssp HHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHH
T ss_pred HHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 8899999999998875
No 72
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.92 E-value=1.1e-23 Score=136.56 Aligned_cols=142 Identities=18% Similarity=0.393 Sum_probs=121.6
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHH
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSE 84 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 84 (149)
+++.+++++...|... +++|.|+.++|..++..+.....+..++..+|..+|.+++|.|++.||+..+.........+
T Consensus 48 ~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~ 125 (224)
T 1s1e_A 48 FTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 125 (224)
T ss_dssp CCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHH
T ss_pred CCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHH
Confidence 5667777766666654 47899999999999998833347889999999999999999999999999998776666668
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHh----CCC----C----CHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMMNL----GER----L----SDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~~~----~~~----~----~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+..+|+.+|.+++|+|+.+||..++..+ |.. + ..+++..+|..+|.|++|.|+++||+.++.+
T Consensus 126 ~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 201 (224)
T 1s1e_A 126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 201 (224)
T ss_dssp HHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 89999999999999999999999999876 532 2 3478999999999999999999999998864
No 73
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.92 E-value=3.5e-24 Score=135.44 Aligned_cols=136 Identities=21% Similarity=0.378 Sum_probs=117.9
Q ss_pred HHHHHhhhcCC-CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 13 FQEAFCMIDKD-SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 13 l~~~f~~~d~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
+..+|..+|.+ ++|.|+.++|..++..+.+...+...+..+|..+|.+++|.|++.||...+.........+.+..+|+
T Consensus 27 i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 106 (190)
T 1g8i_A 27 VQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFK 106 (190)
T ss_dssp HHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 34567777776 89999999999999987444567788999999999999999999999999987766666688999999
Q ss_pred hhcCCCCCcccHHHHHHHHHHh----C--------CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 92 VFDRDQDGFISAAELRNVMMNL----G--------ERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~~~----~--------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|.+++|+|+.+||..++..+ | ...+.+++..+|..+|.|++|.|+++||++++.+
T Consensus 107 ~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~ 175 (190)
T 1g8i_A 107 LYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175 (190)
T ss_dssp HHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred hhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 9999999999999999999873 3 3467889999999999999999999999998764
No 74
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.92 E-value=4.2e-24 Score=136.89 Aligned_cols=136 Identities=21% Similarity=0.328 Sum_probs=118.7
Q ss_pred HHHHHHhhhcCC-CCCCccHHHHHHHHHHhcCCC-CCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHH
Q 032008 12 EFQEAFCMIDKD-SDGLITMKDLATVIQSAQDEH-PRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEA 89 (149)
Q Consensus 12 ~l~~~f~~~d~~-~~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 89 (149)
++..+|..+|.+ ++|.|+.++|..++..+ +.. .+..++..+|..+|.+++|.|++.||+..+.........+.+..+
T Consensus 34 ~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~ 112 (207)
T 2d8n_A 34 ELCSWYQSFLKDCPTGRITQQQFQSIYAKF-FPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWA 112 (207)
T ss_dssp HHHHHHHHHHHHCTTSEEEHHHHHHHHHHT-CTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHH
T ss_pred HHHHHHHHHHhhCCCCCCCHHHHHHHHHHh-ccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHH
Confidence 345567777777 79999999999999988 553 788899999999999999999999999999877665666789999
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHh----C----CCCC------HHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 90 FKVFDRDQDGFISAAELRNVMMNL----G----ERLS------DEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 90 f~~~D~~~~g~i~~~e~~~~l~~~----~----~~~~------~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
|+.+|.+++|+|+.+||..++..+ | ..++ .+++..+|..+|.|++|.|+++||+.++.+
T Consensus 113 f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 185 (207)
T 2d8n_A 113 FSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA 185 (207)
T ss_dssp HHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHH
T ss_pred HHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHh
Confidence 999999999999999999999886 6 4444 367999999999999999999999998864
No 75
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.92 E-value=5.5e-25 Score=145.40 Aligned_cols=143 Identities=23% Similarity=0.443 Sum_probs=126.1
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCH------HHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRK------EEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~------~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+++.+.++++.+|..+|.+++|.|+.+||..++..+ +..++. ..+..++..+|.+++|.|+++||+.++...
T Consensus 9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l-~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~ 87 (263)
T 2f33_A 9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQEL-LQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE 87 (263)
T ss_dssp TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHH-HHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHH-HhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence 4677788899999999999999999999999999988 655444 788999999999999999999999987542
Q ss_pred ---------cccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh----CCCCCHHHHHH----HHHhhCcCCCCceeHH
Q 032008 78 ---------MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL----GERLSDEETEQ----MIREADLDGDGLVSFE 140 (149)
Q Consensus 78 ---------~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~----~~~~~d~~~~g~i~~~ 140 (149)
......+.+..+|+.+|.+++|+|+.+|+..++..+ |..+++.++.. ++..+|.+++|.|+++
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ 167 (263)
T 2f33_A 88 ENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167 (263)
T ss_dssp TTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHH
T ss_pred hhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence 334455789999999999999999999999999988 88899988877 9999999999999999
Q ss_pred HHHHHHh
Q 032008 141 EFARMMM 147 (149)
Q Consensus 141 ef~~~l~ 147 (149)
||+.++.
T Consensus 168 ef~~~~~ 174 (263)
T 2f33_A 168 EMARLLP 174 (263)
T ss_dssp HHHHHSC
T ss_pred HHHHHHH
Confidence 9998764
No 76
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.92 E-value=1.9e-23 Score=132.04 Aligned_cols=142 Identities=20% Similarity=0.407 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHH
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSE 84 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 84 (149)
+++++++++...|... +++|.|+.++|..++..+.....+...+..+|..+|.+++|.|++.||...+.........+
T Consensus 22 ~~~~~i~~~~~~fd~~--~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~ 99 (190)
T 1fpw_A 22 FDRREIQQWHKGFLRD--CPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99 (190)
T ss_dssp STHHHHHHHHHHHHHH--CTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTH
T ss_pred CCHHHHHHHHHHHHHH--CCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHH
Confidence 5566655554444432 37999999999999998833345667799999999999999999999999998776666668
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHh----CC--------CCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMMNL----GE--------RLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~~~----~~--------~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+..+|+.+|.+++|+|+.+||..++... |. ..+.+++..+|..+|.|++|.|+++||++++.+
T Consensus 100 ~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 175 (190)
T 1fpw_A 100 KLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175 (190)
T ss_dssp HHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHS
T ss_pred HHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 89999999999999999999999999873 42 367788999999999999999999999998864
No 77
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=139.66 Aligned_cols=138 Identities=25% Similarity=0.445 Sum_probs=116.5
Q ss_pred HHHHHHHHhhhcCC-CCCCccHHHHHHHHHHhcCCCCC-HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHH
Q 032008 10 IAEFQEAFCMIDKD-SDGLITMKDLATVIQSAQDEHPR-KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELK 87 (149)
Q Consensus 10 ~~~l~~~f~~~d~~-~~g~i~~~e~~~~l~~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 87 (149)
.+++..+|..+|.+ ++|.|+.++|..++..+ +..+. ...+..+|..+|.+++|.|++.||+..+.........+.+.
T Consensus 18 ~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~-~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~ 96 (211)
T 2ggz_A 18 TQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQ-GLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLK 96 (211)
T ss_dssp ------CCCSHHHHCTTSEEEHHHHHHHTTCC-SCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHh-CCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHH
Confidence 34567789999987 89999999999999877 65544 34589999999999999999999999998776666668899
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHhC-----CCCCHH-HHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 88 EAFKVFDRDQDGFISAAELRNVMMNLG-----ERLSDE-ETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 88 ~~f~~~D~~~~g~i~~~e~~~~l~~~~-----~~~~~~-~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|+.+|.+++|+|+.+||..++...+ ...+.+ .+..+|..+|.|++|.|+++||+.++.+
T Consensus 97 ~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 97 WYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163 (211)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence 999999999999999999999999886 556654 5899999999999999999999998764
No 78
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.92 E-value=1.9e-24 Score=135.77 Aligned_cols=135 Identities=18% Similarity=0.308 Sum_probs=116.7
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhcc---CCCCCcccHHHHHHHHHhhcccCcHH
Q 032008 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVD---FDGNGSIDFLEFLTIMGRKMKENVSE 84 (149)
Q Consensus 8 ~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d---~~~~g~i~~~ef~~~~~~~~~~~~~~ 84 (149)
.++.++++.|..+| ++|.|+.++|..++ |..++...+..++..++ .+++|.|++.+|..++.........+
T Consensus 25 ~~~~~~~~~F~~~D--~dG~I~~~el~~~l----g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~ 98 (179)
T 3a8r_A 25 DGWAAVEKRFNQLQ--VDGVLLRSRFGKCI----GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDN 98 (179)
T ss_dssp CCHHHHHHHHHHHC--BTTBEEGGGHHHHH----TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHH
T ss_pred hhHHHHHHHHhccC--CCCCCcHHHHHHHH----CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHH
Confidence 34678889999999 79999999999964 77888888888888887 46778999999999887655445558
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHH-HhCCC-C------CHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMM-NLGER-L------SDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~-~~~~~-~------~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+..+|+.+|.+++|+|+.+|+..++. .+|.. + +++++..++..+|.|++|.|+++||+.++..
T Consensus 99 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 170 (179)
T 3a8r_A 99 RLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170 (179)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 899999999999999999999999998 77765 5 7889999999999999999999999998754
No 79
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.91 E-value=1.5e-24 Score=139.76 Aligned_cols=140 Identities=23% Similarity=0.412 Sum_probs=120.0
Q ss_pred hhhHHHHHHHHHHHhhhcC-----CC-C--CCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCc-ccHHHHHHHH
Q 032008 4 ALTEDQIAEFQEAFCMIDK-----DS-D--GLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS-IDFLEFLTIM 74 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~-----~~-~--g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~-i~~~ef~~~~ 74 (149)
.|++.+++++.+.|..+|+ ++ + |.|+.++|.. +..+ +..+..+ .++..+|.+++|. |++.||+..+
T Consensus 44 ~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~l-g~~~~~~---~lf~~~D~d~dG~~I~f~EF~~~~ 118 (214)
T 2l4h_A 44 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPEL-KANPFKE---RICRVFSTSPAKDSLSFEDFLDLL 118 (214)
T ss_dssp SCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHH-HTSTTHH---HHHHHHCCSSSCCSEEHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhcc-CCChHHH---HHHHHhCcCCCCCEecHHHHHHHH
Confidence 3677888888999999998 56 6 9999999999 8877 7777654 5678889999999 9999999999
Q ss_pred HhhcccCc-HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCC-----CCCHHHHHH----HHHhhCcCCCCceeHHHHHH
Q 032008 75 GRKMKENV-SEELKEAFKVFDRDQDGFISAAELRNVMMNLGE-----RLSDEETEQ----MIREADLDGDGLVSFEEFAR 144 (149)
Q Consensus 75 ~~~~~~~~-~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~-----~~~~~~~~~----~~~~~d~~~~g~i~~~ef~~ 144 (149)
........ .+.+..+|+.+|.+++|+|+.+||..++..++. .++++++.. ++..+|.|++|.|+|+||+.
T Consensus 119 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~ 198 (214)
T 2l4h_A 119 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 198 (214)
T ss_dssp HHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 87665543 368999999999999999999999999998864 677777664 99999999999999999999
Q ss_pred HHhc
Q 032008 145 MMMA 148 (149)
Q Consensus 145 ~l~~ 148 (149)
++.+
T Consensus 199 ~~~~ 202 (214)
T 2l4h_A 199 VISR 202 (214)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8764
No 80
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.91 E-value=1.4e-23 Score=132.89 Aligned_cols=135 Identities=27% Similarity=0.479 Sum_probs=115.5
Q ss_pred HHHHHHhhhcCC-CCCCccHHHHHHHHHHhcCCCC-CHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHH
Q 032008 12 EFQEAFCMIDKD-SDGLITMKDLATVIQSAQDEHP-RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEA 89 (149)
Q Consensus 12 ~l~~~f~~~d~~-~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 89 (149)
++..+|..+|.+ ++|.|+.++|..++..+ +... +...+..+|..+|.+++|.|++.||...+.........+.+..+
T Consensus 26 ~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~ 104 (193)
T 1bjf_A 26 EIQEWYKGFLRDCPSGHLSMEEFKKIYGNF-FPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWA 104 (193)
T ss_dssp HHHHHHHHHHHHSTTSEEEHHHHHHHHTTT-SSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCcCHHHHHHHHHHh-cCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHH
Confidence 345567778877 89999999999999887 5543 56778999999999999999999999999877666666889999
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHh----C--CCCC------HHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 90 FKVFDRDQDGFISAAELRNVMMNL----G--ERLS------DEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 90 f~~~D~~~~g~i~~~e~~~~l~~~----~--~~~~------~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
|+.+|.+++|+|+.+||..++..+ | ..++ ...+..+|..+|.|++|.|+++||++++.
T Consensus 105 f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 174 (193)
T 1bjf_A 105 FSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 174 (193)
T ss_dssp HHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHH
T ss_pred HhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 999999999999999999999874 4 2333 35699999999999999999999999875
No 81
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.91 E-value=7.2e-23 Score=135.20 Aligned_cols=142 Identities=24% Similarity=0.422 Sum_probs=122.8
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHH
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSE 84 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 84 (149)
+++.+++.+...|.. .+++|.|+.++|..++..+.....+...+..+|..+|.+++|.|+++||+..+.........+
T Consensus 88 ~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~ 165 (256)
T 2jul_A 88 FTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHE 165 (256)
T ss_dssp SCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHH
T ss_pred CCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHH
Confidence 566676666665554 247899999999999999844667888999999999999999999999999998776666678
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHh----C--------CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMMNL----G--------ERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~~~----~--------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+..+|+.+|.+++|+|+.+||..++..+ | ...+.+++..+|..+|.|++|.|+++||+.++.+
T Consensus 166 ~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 241 (256)
T 2jul_A 166 KLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241 (256)
T ss_dssp HHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 89999999999999999999999999876 4 2347789999999999999999999999998764
No 82
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.91 E-value=4.6e-23 Score=128.82 Aligned_cols=119 Identities=18% Similarity=0.263 Sum_probs=107.5
Q ss_pred cCCCCCCccHHHHHHHHHHh-----cCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcC
Q 032008 21 DKDSDGLITMKDLATVIQSA-----QDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDR 95 (149)
Q Consensus 21 d~~~~g~i~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~ 95 (149)
..+++|.|+.+|+..+++.+ .+..++.++++.++..+|.+++|.|+++||+.++... ..+..+|+.+|
T Consensus 14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD- 86 (174)
T 2i7a_A 14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ- 86 (174)
T ss_dssp SCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-
T ss_pred cCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-
Confidence 46889999999999999987 2457889999999999999999999999999887643 57899999999
Q ss_pred CCCCcccHHHHHHHHHHh----CCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 96 DQDGFISAAELRNVMMNL----GERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 96 ~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+++|+|+.+|++.++..+ |..+++++++.++..+| +++|.|+|+||+.++.
T Consensus 87 d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~ 141 (174)
T 2i7a_A 87 TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLM 141 (174)
T ss_dssp SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHH
Confidence 999999999999999999 99999999999999999 9999999999998875
No 83
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.91 E-value=5.6e-24 Score=141.16 Aligned_cols=143 Identities=25% Similarity=0.450 Sum_probs=123.8
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHH----HhcCC--CCCHHHHHH----HHhhccCCCCCcccHHHHHHH
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQ----SAQDE--HPRKEEVQE----MISEVDFDGNGSIDFLEFLTI 73 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~----~~~~~--~~~~~~~~~----~~~~~d~~~~g~i~~~ef~~~ 73 (149)
.+++.+.++++.+|..+|.+++|.|+.+||..++. .+ |. .++..++.. +|..+|.+++|.|+++||+..
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~l-g~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~ 82 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKL-QPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANM 82 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHH-STTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence 45666778899999999999999999999999998 77 88 888888766 457889999999999999998
Q ss_pred H-----------HhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh----CCCCCHHHHHH----HHHhhCcCCC
Q 032008 74 M-----------GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL----GERLSDEETEQ----MIREADLDGD 134 (149)
Q Consensus 74 ~-----------~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~----~~~~~d~~~~ 134 (149)
+ .........+.+..+|+.+|.+++|.|+.+|+..++..+ |..++..++.. ++..+|.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~d 162 (272)
T 2be4_A 83 ILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKD 162 (272)
T ss_dssp HSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCS
T ss_pred HhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCC
Confidence 3 333334556889999999999999999999999999988 88888887754 9999999999
Q ss_pred CceeHHHHHHHHh
Q 032008 135 GLVSFEEFARMMM 147 (149)
Q Consensus 135 g~i~~~ef~~~l~ 147 (149)
|.|+++||+.++.
T Consensus 163 g~i~~~ef~~~~~ 175 (272)
T 2be4_A 163 GRLDLNDLARILA 175 (272)
T ss_dssp SEEEHHHHGGGSC
T ss_pred CcCcHHHHHHHHh
Confidence 9999999988753
No 84
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.90 E-value=3.5e-24 Score=145.62 Aligned_cols=131 Identities=21% Similarity=0.315 Sum_probs=120.6
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHH-HHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHH
Q 032008 9 QIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQE-MISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELK 87 (149)
Q Consensus 9 ~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~-~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 87 (149)
....+..+|..+|.+++|.|+.++|..++ . +..++..++.. ++..+|.+++|.|+|.+|+.++.... .+.
T Consensus 186 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~-g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~ 256 (323)
T 1ij5_A 186 DLAALVADFRKIDTNSNGTLSRKEFREHF--V-RLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLR 256 (323)
T ss_dssp HHHTSCCCHHHHCTTCCSEECHHHHHHHH--H-HTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHH--c-CCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHH
Confidence 34556778999999999999999999999 5 78888899999 99999999999999999999987654 689
Q ss_pred HHhhhhcCCCCCcccHHHHHHHH-HHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 88 EAFKVFDRDQDGFISAAELRNVM-MNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 88 ~~f~~~D~~~~g~i~~~e~~~~l-~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|+.+|.+++|+|+.+||..++ ..+|..++++++..++..+|.|++|.|+|+||+.++..
T Consensus 257 ~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~ 318 (323)
T 1ij5_A 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (323)
T ss_dssp HHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 99999999999999999999999 99998899999999999999999999999999999875
No 85
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.90 E-value=2.2e-23 Score=137.74 Aligned_cols=139 Identities=20% Similarity=0.400 Sum_probs=121.2
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhc---CCCCCHHHHHH----HHhhccCCCCCcccHHHHHHHHHhh-----
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQ---DEHPRKEEVQE----MISEVDFDGNGSIDFLEFLTIMGRK----- 77 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~----~~~~~d~~~~g~i~~~ef~~~~~~~----- 77 (149)
...+..+|..+|.+++|.|+.++|..++..+. +..++..++.. ++..+|.+++|.|++++|+.++...
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~ 181 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLL 181 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999998763 67788888776 9999999999999999999887531
Q ss_pred ---cccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCC----CCCHHHHHHHHHh-hCcCCCCceeHHHHHHHHhc
Q 032008 78 ---MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE----RLSDEETEQMIRE-ADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 78 ---~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~----~~~~~~~~~~~~~-~d~~~~g~i~~~ef~~~l~~ 148 (149)
......+.+..+|+.+|.+++|+|+.+||..++..++. .++++++..++.. +|.|++|.|+|+||+.++.+
T Consensus 182 ~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 260 (263)
T 2f33_A 182 KFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSA 260 (263)
T ss_dssp HHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHHCC
T ss_pred HhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHHhc
Confidence 12344578999999999999999999999999998876 7899999999987 79999999999999998864
No 86
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.90 E-value=5.7e-24 Score=144.58 Aligned_cols=136 Identities=18% Similarity=0.351 Sum_probs=122.5
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCc
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENV 82 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 82 (149)
..|++.++..+..+|..+|.+++|.|+.++|..++..+ |..++..++..++..+|.+++|.|++.+|..+.. .
T Consensus 114 ~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~l-g~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~~------~ 186 (323)
T 1ij5_A 114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKY-ADTIPEGPLKKLFVMVENDTKGRMSYITLVAVAN------D 186 (323)
T ss_dssp CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHH-HTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHH------H
T ss_pred HhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhhh------H
Confidence 46899999999999999999999999999999999998 8889999999999999999999999999876532 2
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHH-HHHhhCcCCCCceeHHHHHHHHh
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQ-MIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~-~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
...+..+|+.+|.+++|+|+.+++..++ .|..++..++.. ++..+|.+++|.|+|.+|+.++.
T Consensus 187 ~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~ 250 (323)
T 1ij5_A 187 LAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGL 250 (323)
T ss_dssp HHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHH
Confidence 2456778999999999999999999999 788888889999 99999999999999999998865
No 87
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.89 E-value=3.4e-23 Score=137.37 Aligned_cols=137 Identities=18% Similarity=0.367 Sum_probs=117.1
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhc---CCCCCHHHHH----HHHhhccCCCCCcccHHHHHHHHHhh------
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQ---DEHPRKEEVQ----EMISEVDFDGNGSIDFLEFLTIMGRK------ 77 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~----~~~~~~d~~~~g~i~~~ef~~~~~~~------ 77 (149)
..+..+|..+|.+++|.|+.++|..++.... +..++..++. .++..+|.+++|.|++++|+.++...
T Consensus 104 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~~ 183 (272)
T 2be4_A 104 VEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQ 183 (272)
T ss_dssp HHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSSTT
T ss_pred HHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHhh
Confidence 4678899999999999999999999998763 5677777764 49999999999999999998876431
Q ss_pred ------cccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCC----CCCHHHHHH----HHHhhCcCCCCceeHHHHH
Q 032008 78 ------MKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE----RLSDEETEQ----MIREADLDGDGLVSFEEFA 143 (149)
Q Consensus 78 ------~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~----~~~~~~~~~----~~~~~d~~~~g~i~~~ef~ 143 (149)
......+.+..+|+.+|.+++|+|+.+||..++..++. .++++++.. ++..+|.|++|.|+++||+
T Consensus 184 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~ 263 (272)
T 2be4_A 184 FKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELA 263 (272)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHH
T ss_pred hhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 01122367999999999999999999999999998765 789988887 9999999999999999999
Q ss_pred HHHh
Q 032008 144 RMMM 147 (149)
Q Consensus 144 ~~l~ 147 (149)
+++.
T Consensus 264 ~~~~ 267 (272)
T 2be4_A 264 LCLG 267 (272)
T ss_dssp HHTT
T ss_pred HHHc
Confidence 9875
No 88
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.89 E-value=1.9e-22 Score=149.13 Aligned_cols=136 Identities=19% Similarity=0.401 Sum_probs=126.5
Q ss_pred hhhHHH-HHHHHHHHhhhcCCCCCCccHHHHHHHHHHh-------cCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHH
Q 032008 4 ALTEDQ-IAEFQEAFCMIDKDSDGLITMKDLATVIQSA-------QDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMG 75 (149)
Q Consensus 4 ~l~~~~-~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~-------~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 75 (149)
++++++ .++++.+|..+| +++|.|+.+||..++..+ .+..++..+++.++..+|.+++|.|+++||..++.
T Consensus 524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~ 602 (714)
T 3bow_A 524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602 (714)
T ss_dssp CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 467777 889999999999 999999999999999986 25688999999999999999999999999999887
Q ss_pred hhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 76 RKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 76 ~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.. +.+..+|+.+|.+++|+|+.+||..++..+|..++.++++.++..+| |++|.|+++||+.++.
T Consensus 603 ~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~ 667 (714)
T 3bow_A 603 KI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLV 667 (714)
T ss_dssp HH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHH
T ss_pred HH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHH
Confidence 54 67999999999999999999999999999999999999999999999 9999999999999875
No 89
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.85 E-value=2.9e-20 Score=107.67 Aligned_cols=102 Identities=25% Similarity=0.521 Sum_probs=93.5
Q ss_pred CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCC
Q 032008 42 DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLS 118 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~ 118 (149)
|..++..++..++..+| ++|.|++.+|+..+.. .....+.+..+|+.+|.+++|+|+.+|+..++..+ |..++
T Consensus 4 g~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~ 79 (109)
T 1bu3_A 4 SGILADADVAAALKACE--AADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALT 79 (109)
T ss_dssp SCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCC
T ss_pred cccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHc--ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCC
Confidence 78899999999999998 7899999999998753 23455889999999999999999999999999999 78899
Q ss_pred HHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 119 DEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 119 ~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
++++..++..+|.+++|.|+++||+.++.
T Consensus 80 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 80 DAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 99999999999999999999999999875
No 90
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.85 E-value=2.5e-20 Score=107.92 Aligned_cols=103 Identities=31% Similarity=0.621 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCC
Q 032008 42 DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLS 118 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~ 118 (149)
+..++.+++..++..+|. +|.|++.+|+..+.. .....+.+..+|+.+|.+++|+|+.+|+..++..+ |..++
T Consensus 3 ~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~ 78 (109)
T 5pal_A 3 TKVLKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78 (109)
T ss_dssp GGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCC
T ss_pred CCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCC
Confidence 566889999999999987 899999999998864 34456889999999999999999999999999998 89999
Q ss_pred HHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 119 DEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 119 ~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
++++..++..+|.|++|.|+++||+.++.+
T Consensus 79 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 79 DTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 999999999999999999999999999864
No 91
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.85 E-value=1.2e-20 Score=109.25 Aligned_cols=102 Identities=25% Similarity=0.542 Sum_probs=93.6
Q ss_pred CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCC
Q 032008 42 DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLS 118 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~ 118 (149)
+..++.+++..++..+| ++|.|+++||+..+.. .....+.+..+|+.+|.+++|+|+.+|+..++..+ |..++
T Consensus 4 ~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~ 79 (109)
T 3fs7_A 4 TDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLT 79 (109)
T ss_dssp GGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCC
T ss_pred cCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCC
Confidence 66789999999999998 7999999999998864 34456889999999999999999999999999999 88899
Q ss_pred HHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 119 DEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 119 ~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
++++..++..+|.+++|.|+++||+.++.
T Consensus 80 ~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 80 SAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 99999999999999999999999999875
No 92
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.85 E-value=2.1e-20 Score=108.12 Aligned_cols=101 Identities=30% Similarity=0.566 Sum_probs=92.3
Q ss_pred CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCC
Q 032008 42 DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLS 118 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~ 118 (149)
|. ++.+++..++..+| ++|.|++++|+..+.. .....+.+..+|+.+|.+++|+|+.+|+..++..+ |..++
T Consensus 4 G~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~ 78 (108)
T 2pvb_A 4 AG-LKDADVAAALAACS--AADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT 78 (108)
T ss_dssp TT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC
T ss_pred CC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhC--ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCC
Confidence 67 89999999999998 7899999999998753 34455889999999999999999999999999998 78899
Q ss_pred HHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 119 DEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 119 ~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
++++..++..+|.+++|.|+++||+.++.
T Consensus 79 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 79 DAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 99999999999999999999999999875
No 93
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.85 E-value=1.9e-20 Score=108.40 Aligned_cols=103 Identities=27% Similarity=0.583 Sum_probs=93.1
Q ss_pred CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCC
Q 032008 42 DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLS 118 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~ 118 (149)
|..++.+++..++..+| ++|.|++.+|+..+.. .....+.+..+|+.+|.+++|+|+.+|+..++..+ |..++
T Consensus 3 g~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~ 78 (109)
T 1rwy_A 3 TDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLS 78 (109)
T ss_dssp HHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCC
T ss_pred CCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhc--CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCC
Confidence 55688999999999998 8899999999998853 34455889999999999999999999999999999 78899
Q ss_pred HHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 119 DEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 119 ~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+++..++..+|.+++|.|+++||+.++.+
T Consensus 79 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 79 AKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 999999999999999999999999998864
No 94
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.85 E-value=1.6e-21 Score=141.96 Aligned_cols=132 Identities=14% Similarity=0.182 Sum_probs=66.8
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.++++|..+|.+++|.|+.+||..++..+ +..++.+++..++..+|.+++|.|+++||+.++..... .+++..+|+
T Consensus 12 ~l~~~F~~fD~d~dG~Is~~El~~~l~~l-g~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---~~el~~aF~ 87 (624)
T 1djx_A 12 WIHSCLRKADKNKDNKMNFKELKDFLKEL-NIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ---RAEIDRAFE 87 (624)
T ss_dssp ---------------------------------------------------------CTTHHHHHHTC---CHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---HHHHHHHHH
Confidence 58899999999999999999999999988 88899999999999999999999999999999876543 267999999
Q ss_pred hhcCCCCCcccHHHHHHHHHHh-CCC-CCHHHHHHHHHhhCcC----CCCceeHHHHHHHHhc
Q 032008 92 VFDRDQDGFISAAELRNVMMNL-GER-LSDEETEQMIREADLD----GDGLVSFEEFARMMMA 148 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~~~-~~~-~~~~~~~~~~~~~d~~----~~g~i~~~ef~~~l~~ 148 (149)
.+|.+ +|+|+.+||+.+|... |.. ++++++..++..++.+ ++|.|+++||.++|.+
T Consensus 88 ~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s 149 (624)
T 1djx_A 88 EAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 149 (624)
T ss_dssp HHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred HhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence 99985 8999999999999975 665 8999999999999988 6899999999998864
No 95
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.84 E-value=3.9e-20 Score=118.35 Aligned_cols=126 Identities=19% Similarity=0.268 Sum_probs=113.8
Q ss_pred hcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCC-CCCcccHHHHHHHHHhhccc-CcHHHHHHHhhhhcCCC
Q 032008 20 IDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQ 97 (149)
Q Consensus 20 ~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~f~~~D~~~ 97 (149)
++.+++|.|+.+++..++... + ++..++..+|..++.+ ++|.|++++|..++...... ...+.+..+|+.+|.++
T Consensus 8 mg~~~~g~l~~~el~~~~~~~-~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~ 84 (207)
T 2d8n_A 8 MGNSKSGALSKEILEELQLNT-K--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNL 84 (207)
T ss_dssp CTTCCTTCCCHHHHHHHHHHS-S--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTC
T ss_pred hccccCCCCCHHHHHHHHHHc-C--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCC
Confidence 567889999999999999876 4 6899999999999988 79999999999999876543 45578999999999999
Q ss_pred CCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 98 DGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 98 ~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+|.|+.+||..++...+...+.+++..+|..+|.|++|.|+++||..++..
T Consensus 85 ~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~ 135 (207)
T 2d8n_A 85 DGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA 135 (207)
T ss_dssp CSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence 999999999999999988788889999999999999999999999998753
No 96
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.84 E-value=1.9e-20 Score=108.63 Aligned_cols=103 Identities=29% Similarity=0.635 Sum_probs=93.4
Q ss_pred CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCC
Q 032008 42 DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLS 118 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~ 118 (149)
|..++..++..++..+| ++|.|++++|+..+. ......+.+..+|+.+|.+++|+|+.+|+..++..+ |..++
T Consensus 4 G~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~--~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~ 79 (110)
T 1pva_A 4 KDLLKADDIKKALDAVK--AEGSFNHKKFFALVG--LKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT 79 (110)
T ss_dssp HHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHT--CTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC
T ss_pred cccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHc--cCcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCC
Confidence 66789999999999998 789999999999874 234456889999999999999999999999999998 78899
Q ss_pred HHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 119 DEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 119 ~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
++++..++..+|.+++|.|+++||+.++.+
T Consensus 80 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 80 DAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 999999999999999999999999998864
No 97
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.84 E-value=6e-21 Score=144.08 Aligned_cols=136 Identities=20% Similarity=0.422 Sum_probs=122.1
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc-cCc
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK-ENV 82 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~~~ 82 (149)
.+++.++..+..+|..+|.+++|.|+.++|..++..+ |..++..++..++..+|.+++|.|+|++|+.++..... ...
T Consensus 718 ~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~ 796 (863)
T 1sjj_A 718 GISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISM-GYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDT 796 (863)
T ss_dssp CSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHH-TCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSS
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHc-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCC
Confidence 4667889999999999999999999999999999999 89999999999999999999999999999999876543 233
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcC-----CCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLD-----GDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-----~~g~i~~~ef~~~l~~ 148 (149)
.+.+..+|+.+ .+++|+|+.+||..++. ++++..++..+|.+ ++|.|+|+||+.++.+
T Consensus 797 ~~~l~~aF~~~-~d~~G~Is~~El~~~l~-------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~ 859 (863)
T 1sjj_A 797 ADQVMASFKIL-AGDKNYITVDELRRELP-------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG 859 (863)
T ss_dssp SHHHHHHHHGG-GTSSSEEEHHHHHHHSC-------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSC
T ss_pred HHHHHHHHHHH-hCCCCcCcHHHHHHHCC-------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhc
Confidence 47899999999 89999999999999873 77899999999976 6899999999998864
No 98
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.84 E-value=3.5e-19 Score=112.72 Aligned_cols=125 Identities=17% Similarity=0.251 Sum_probs=110.5
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHh
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAF 90 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f 90 (149)
..+..+|..+|.+++|.|+.+||..++... ..+..+|..+|.+++|.|+.+||...+.........+.+..+|
T Consensus 63 ~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~ 135 (191)
T 1y1x_A 63 ATTEKLLHMYDKNHSGEITFDEFKDLHHFI-------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALM 135 (191)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHH-------HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 345667899999999999999999988653 5789999999999999999999999998765556668899999
Q ss_pred hhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCc--eeHHHHHHHHhc
Q 032008 91 KVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGL--VSFEEFARMMMA 148 (149)
Q Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~--i~~~ef~~~l~~ 148 (149)
+.+|.+++|.|+.+||..++... ..+..+|+.+|.+++|. ++++||+.++..
T Consensus 136 ~~~D~d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~~ 189 (191)
T 1y1x_A 136 RKFDRQRRGSLGFDDYVELSIFV------CRVRNVFAFYDRERTGQVTFTFDTFIGGSVS 189 (191)
T ss_dssp HHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSEEEEEHHHHHHHHHH
T ss_pred HHhCCCCCCeEeHHHHHHHHHHH------HHHHHHHHHhCcCCCceEEeeHHHHHHHHHh
Confidence 99999999999999999999864 57899999999999999 789999998764
No 99
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.84 E-value=1.9e-21 Score=147.18 Aligned_cols=135 Identities=25% Similarity=0.435 Sum_probs=110.1
Q ss_pred hhhHHH-HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCC--------CCCHHHHHHHHhhccCCCCCcccHHHHHHHH
Q 032008 4 ALTEDQ-IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDE--------HPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74 (149)
Q Consensus 4 ~l~~~~-~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~--------~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 74 (149)
.+++++ +++++++|..+| +++|.|+.+||..++..+ +. .++..+++.++..+|.+++|.|+++||+.++
T Consensus 526 ~l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~-~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~ 603 (900)
T 1qxp_A 526 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRI-ISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILW 603 (900)
T ss_dssp ---------------CCCC-CSSSSCCCSCTTTTTCC----------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHH
T ss_pred CCCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHh-hcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 355555 788999999999 999999999999999877 43 7889999999999999999999999999998
Q ss_pred HhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 75 GRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 75 ~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
... +.+..+|+.+|.+++|+|+.+||..++..+|..++.+++..++..+| +++|.|+++||+.++.
T Consensus 604 ~~~------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~ 669 (900)
T 1qxp_A 604 NRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLV 669 (900)
T ss_dssp HHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHH
T ss_pred HHH------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHH
Confidence 765 67999999999999999999999999999999999999999999999 9999999999998875
No 100
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.83 E-value=4.7e-19 Score=110.26 Aligned_cols=124 Identities=19% Similarity=0.296 Sum_probs=109.5
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.+..+|..+|.+++|.|+.++|..++... ..+..+|..+|.+++|.|+.++|...+.........+.+..+|+
T Consensus 45 ~~~~l~~~~D~~~~g~i~~~ef~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 117 (172)
T 2znd_A 45 TVRSIISMFDRENKAGVNFSEFTGVWKYI-------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 117 (172)
T ss_dssp HHHHHHHHHCSSSSSEECHHHHHHHHHHH-------HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 45566888999999999999999988654 57899999999999999999999999987655566688999999
Q ss_pred hhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCcee--HHHHHHHHhc
Q 032008 92 VFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVS--FEEFARMMMA 148 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~--~~ef~~~l~~ 148 (149)
.+|.+++|.|+.+||..++... +.+..+|..+|.|++|.|+ +++|+.++.+
T Consensus 118 ~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 118 KFDRQGRGQIAFDDFIQGCIVL------QRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp HHCTTCSSSEEHHHHHHHHHHH------HHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred HhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 9999999999999999999865 5789999999999999996 7999888765
No 101
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.83 E-value=4.5e-20 Score=106.69 Aligned_cols=103 Identities=23% Similarity=0.496 Sum_probs=92.5
Q ss_pred CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCC
Q 032008 42 DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLS 118 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~ 118 (149)
+..++.+++..++..+| ++|.|++++|+..+.. .....+.+..+|+.+|.+++|+|+.+|+..++..+ |..++
T Consensus 3 ~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~ 78 (108)
T 1rro_A 3 TDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELT 78 (108)
T ss_dssp GGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCC
T ss_pred cccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCC
Confidence 56788999999999998 7899999999998742 34455889999999999999999999999999998 67899
Q ss_pred HHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 119 DEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 119 ~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+++..++..+|.+++|.|+++||+.++.+
T Consensus 79 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~s 108 (108)
T 1rro_A 79 ESETKSLMDAADNDGDGKIGADEFQEMVHS 108 (108)
T ss_dssp HHHHHHHHHHHCCSSSSSEEHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHcC
Confidence 999999999999999999999999998753
No 102
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.82 E-value=3e-20 Score=111.61 Aligned_cols=100 Identities=29% Similarity=0.454 Sum_probs=67.3
Q ss_pred HHHHHHhhccCCCCCcccHHHHHHHHHhhcccC-cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHH
Q 032008 49 EVQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN-VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE-RLSDEETEQMI 126 (149)
Q Consensus 49 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~-~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~ 126 (149)
....++..+|.+++|.|++++|+.++....... ..+.+..+|+.+|.+++|+|+.+|+..++..+|. .++.+++..++
T Consensus 4 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~ 83 (135)
T 3h4s_E 4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMV 83 (135)
T ss_dssp ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHH
T ss_pred hHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence 356788889999999999999998887654432 3378999999999999999999999999999995 99999999999
Q ss_pred HhhCcCCCCceeHHHHHHHHhc
Q 032008 127 READLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|.|++|.|+|+||+.++..
T Consensus 84 ~~~D~d~dG~I~~~EF~~~~~~ 105 (135)
T 3h4s_E 84 REGDLDGDGALNQTEFCVLMVR 105 (135)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHH
T ss_pred HHhCCCCCCCCcHHHHHHHHHH
Confidence 9999999999999999998864
No 103
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.80 E-value=1.9e-18 Score=109.04 Aligned_cols=123 Identities=24% Similarity=0.324 Sum_probs=109.6
Q ss_pred CCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCC-CCCcccHHHHHHHHHhhccc-CcHHHHHHHhhhhcCCCCCc
Q 032008 23 DSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGF 100 (149)
Q Consensus 23 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~f~~~D~~~~g~ 100 (149)
+..|.++.+++..+.... + .+..++..+|..+|.+ ++|.|++++|..++...... ...+.+..+|+.+|.+++|.
T Consensus 3 ~~~~~l~~~el~~~~~~~-~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~ 79 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRST-R--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGY 79 (190)
T ss_dssp CSSCCSCHHHHHHHHHHH-C--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTC
T ss_pred cccccCCHHHHHHHHHhc-C--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCe
Confidence 457899999999988876 4 4888999999999999 89999999999999877443 34477899999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 101 ISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 101 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
|+.+||..++...+...+.+++..+|..+|.+++|.|+++||..++..
T Consensus 80 i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 80 IDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp EEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred EeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 999999999999888889999999999999999999999999998753
No 104
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.79 E-value=2.9e-18 Score=110.83 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=107.8
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.+..+|..+|.+++|.|+.+||..++... ..+..+|..+|.+++|.|+.+||...+.......+.+.+..+++
T Consensus 88 ~~~~l~~~~D~d~dg~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~ 160 (220)
T 3sjs_A 88 TALRMMRIFDTDFNGHISFYEFMAMYKFM-------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHR 160 (220)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 45667888899999999999999988754 57999999999999999999999999987766667789999999
Q ss_pred hhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhh-CcCCCC------ceeHHHHHHHHhc
Q 032008 92 VFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREA-DLDGDG------LVSFEEFARMMMA 148 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~-d~~~~g------~i~~~ef~~~l~~ 148 (149)
.+| +++|.|+.+||..++..+. .+..+|+.+ |.+++| .|+++||...+..
T Consensus 161 ~~d-d~dg~I~~~eF~~~~~~l~------~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 161 LFA-RGMAFCDLNCWIAICAFAA------QTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HHC---CCSEEHHHHHHHHHHHH------HHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred Hhc-CCCCcCcHHHHHHHHHHHH------HHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 999 9999999999999998763 688899999 999999 8899999998765
No 105
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.79 E-value=4.6e-18 Score=106.12 Aligned_cols=122 Identities=17% Similarity=0.238 Sum_probs=105.0
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh----cccCcHHHH
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK----MKENVSEEL 86 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~----~~~~~~~~~ 86 (149)
..+..+|..+|.+++|.|+.+||..++... ..++.+|..+| +++|.|+.+|+...+... -...+.+.+
T Consensus 46 ~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~-------~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~ 117 (174)
T 2i7a_A 46 DECRSLVALMELKVNGRLDQEEFARLWKRL-------VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELL 117 (174)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHHH-------HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHH
Confidence 345667888999999999999999987654 57899999999 999999999999999766 344566889
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCC-ceeHHHHHHHHh
Q 032008 87 KEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDG-LVSFEEFARMMM 147 (149)
Q Consensus 87 ~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g-~i~~~ef~~~l~ 147 (149)
..+++.+| +++|.|+.+||..++... +.+..+|+.+|.+++| .++++||+.+..
T Consensus 118 ~~l~~~~d-d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 118 HLVTLRYS-DSVGRVSFPSLVCFLMRL------EAMAKTFRNLSKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp HHHHHHHS-CTTSEECHHHHHHHHHHH------HHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred HHHHHHHc-CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence 99999999 999999999999998864 4688999999999999 459999998754
No 106
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.79 E-value=4e-20 Score=106.89 Aligned_cols=102 Identities=29% Similarity=0.520 Sum_probs=91.9
Q ss_pred CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCC
Q 032008 42 DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLS 118 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~ 118 (149)
+..++..++..++..+| ++|.|++++|+..+.. .....+.+..+|+.+|.+++|+|+.+|+..++..+ |..++
T Consensus 3 ~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~ 78 (108)
T 2kyc_A 3 TDILSPSDIAAALRDCQ--APDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLT 78 (108)
T ss_dssp TSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTC--TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCC
T ss_pred cccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhh--CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCC
Confidence 67889999999999998 8899999999998842 23344679999999999999999999999999998 78899
Q ss_pred HHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 119 DEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 119 ~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
++++..++..+|.+++|.|+++||+.++.
T Consensus 79 ~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 79 ASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp TTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 99999999999999999999999999875
No 107
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.78 E-value=7e-18 Score=105.07 Aligned_cols=121 Identities=13% Similarity=0.252 Sum_probs=105.1
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHh
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAF 90 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f 90 (149)
..+..+|..+|.+++|.|+.++|..++... ..+..+|..+|.+++|.|+..+|...+.........+.+..++
T Consensus 47 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~ 119 (173)
T 1alv_A 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNI-------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMII 119 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccCHHHHHHHHHHH-------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 355667888999999999999999988753 5789999999999999999999999998776566678899999
Q ss_pred hhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHH
Q 032008 91 KVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146 (149)
Q Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l 146 (149)
+.+| +++|.|+.+||..++... ..+..+|+.+|.|++|.|+.+ |.+++
T Consensus 120 ~~~d-d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~-~~~~l 167 (173)
T 1alv_A 120 RRYS-DEGGNMDFDNFISCLVRL------DAMFRAFKSLDKDGTGQIQVN-IQEWL 167 (173)
T ss_dssp HHHT-CSSSCBCHHHHHHHHHHH------HHHHHHHHHHSSSCCSEEEEE-HHHHH
T ss_pred HHhc-CCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeecHh-HHHHH
Confidence 9999 999999999999998864 578999999999999999866 55544
No 108
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.77 E-value=6.2e-18 Score=106.63 Aligned_cols=123 Identities=22% Similarity=0.327 Sum_probs=107.2
Q ss_pred CCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCC-CCCcccHHHHHHHHHhhccc-CcHHHHHHHhhhhcCCCCCc
Q 032008 23 DSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGF 100 (149)
Q Consensus 23 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~f~~~D~~~~g~ 100 (149)
++.+.++.+++..+... ..++.+++..+|..++.+ ++|.|+++||..++...... ...+.+..+|+.+|.+++|.
T Consensus 3 ~~~~~l~~~~l~~l~~~---~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~ 79 (190)
T 1fpw_A 3 AKTSKLSKDDLTCLKQS---TYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGF 79 (190)
T ss_dssp CCSCCSTTHHHHHHTTT---CCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSE
T ss_pred cccCCCCHHHHHHHHHh---cCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCc
Confidence 35678888888887653 467899999999999887 89999999999999876432 33467899999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 101 ISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 101 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
|+.+||..++...+...+.+++..+|..+|.|++|.|+++||..++..
T Consensus 80 i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~ 127 (190)
T 1fpw_A 80 IHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127 (190)
T ss_dssp ECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred EeHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 999999999999988888899999999999999999999999998753
No 109
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.77 E-value=2.1e-17 Score=102.35 Aligned_cols=121 Identities=16% Similarity=0.258 Sum_probs=103.8
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHh
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAF 90 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f 90 (149)
..+..+|..+|.+++|.|+.++|..++... ..+..+|..+|.+++|.|+.+||...+.........+.+..++
T Consensus 42 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~ 114 (167)
T 1gjy_A 42 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIA 114 (167)
T ss_dssp HHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 345667888999999999999999988654 5789999999999999999999999998765556668899999
Q ss_pred hhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHH--HHHHHH
Q 032008 91 KVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFE--EFARMM 146 (149)
Q Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~--ef~~~l 146 (149)
+.+ +++|.|+.+||..++... ..+..+|..+|.|++|.|+.+ +|+.+.
T Consensus 115 ~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~~~~~l~~~ 164 (167)
T 1gjy_A 115 KRY--STSGKITFDDYIACCVKL------RALTDSFRRRDSAQQGMVNFSYDDFIQCV 164 (167)
T ss_dssp HHT--CBTTBEEHHHHHHHHHHH------HHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHh--CcCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCeeEEeeHHHHHHHH
Confidence 988 889999999999999875 578999999999999999864 555543
No 110
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.77 E-value=2.6e-17 Score=101.69 Aligned_cols=120 Identities=18% Similarity=0.293 Sum_probs=103.6
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHh
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAF 90 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f 90 (149)
..+..+|..+|.+++|.|+.++|..++... ..+..+|..+|.+++|.|+.++|...+.........+.+..++
T Consensus 40 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~ 112 (165)
T 1k94_A 40 ETCRIMIAMLDRDHTGKMGFNAFKELWAAL-------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIV 112 (165)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 345667888999999999999999987654 5789999999999999999999999998765556668889999
Q ss_pred hhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHH
Q 032008 91 KVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146 (149)
Q Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l 146 (149)
+.+ +++|.|+.+||..++... ..+..+|..+|.+++|.|+.+ |.+++
T Consensus 113 ~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~-~~~~l 159 (165)
T 1k94_A 113 KRY--SKNGRIFFDDYVACCVKL------RALTDFFRKRDHLQQGSANFI-YDDFL 159 (165)
T ss_dssp HHH--CBTTBCBHHHHHHHHHHH------HHHHHHHHTTCTTCCSEEEEE-HHHHH
T ss_pred HHh--CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEeee-HHHHH
Confidence 888 889999999999999875 578999999999999999766 65554
No 111
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.76 E-value=1.4e-17 Score=106.90 Aligned_cols=127 Identities=18% Similarity=0.298 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc-----ccC
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM-----KEN 81 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-----~~~ 81 (149)
+.....+..+|..+|.+++|.|+.+||..++... +...+.+.+..+|..+|.+++|.|+++||..++.... ...
T Consensus 53 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~-~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~ 131 (211)
T 2ggz_A 53 QKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLI-MQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTL 131 (211)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH-SCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSC
T ss_pred cchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHh-ccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccc
Confidence 3445568889999999999999999999999988 6677788999999999999999999999999987764 222
Q ss_pred c-HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 82 V-SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 82 ~-~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
. .+.+..+|+.+|.+++|.|+.+||..++... .++..++.. .++|++|+.++.
T Consensus 132 ~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~------~~~~~~~~~-------~~d~~~f~~~~~ 185 (211)
T 2ggz_A 132 SPEEFINLVFHKIDINNDGELTLEEFINGMAKD------QDLLEIVYK-------SFDFSNVLRVIC 185 (211)
T ss_dssp THHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTT------TTTHHHHHH-------HSCTTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhC------HHHHHHHhc-------cCCHHHHHHHHh
Confidence 3 3568999999999999999999999999842 234555552 244677877764
No 112
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.75 E-value=1.8e-17 Score=104.72 Aligned_cols=122 Identities=20% Similarity=0.284 Sum_probs=105.4
Q ss_pred CCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCC-CCCcccHHHHHHHHHhhcccC-cHHHHHHHhhhhcCCCCCc
Q 032008 23 DSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMKEN-VSEELKEAFKVFDRDQDGF 100 (149)
Q Consensus 23 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~~-~~~~~~~~f~~~D~~~~g~ 100 (149)
++.+.++.+++..+... ...+.+++..+|..++.+ ++|.|+.++|..++....... ..+.+..+|+.+|.+++|.
T Consensus 3 ~~~s~l~~~~l~~l~~~---~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~ 79 (193)
T 1bjf_A 3 KQNSKLRPEVMQDLLES---TDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGT 79 (193)
T ss_dssp --CCCCCHHHHHHHHHH---SSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSE
T ss_pred cccccCCHHHHHHHHHH---cCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCc
Confidence 34568899999986653 357889999999999988 899999999999987664433 3467899999999999999
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 101 ISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 101 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
|+..||..++...+...+.+.+..+|..+|.|++|.|+++||..++.
T Consensus 80 i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~ 126 (193)
T 1bjf_A 80 IDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQ 126 (193)
T ss_dssp EEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHH
Confidence 99999999999988878888999999999999999999999998875
No 113
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.75 E-value=4.1e-18 Score=126.93 Aligned_cols=130 Identities=11% Similarity=0.217 Sum_probs=97.7
Q ss_pred HHHHHHHHh--hhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccC-------CCCCcccHHHHHHHHHhhccc
Q 032008 10 IAEFQEAFC--MIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDF-------DGNGSIDFLEFLTIMGRKMKE 80 (149)
Q Consensus 10 ~~~l~~~f~--~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~-------~~~g~i~~~ef~~~~~~~~~~ 80 (149)
.+.++++|. .+|.+++|.|+.+++..++.. ...++..++..++. +++|.|+|+||+.++.....
T Consensus 145 ~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~------~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~- 217 (799)
T 2zkm_X 145 STFLDKILVKLKMQLNSEGKIPVKNFFQMFPA------DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP- 217 (799)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS------CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC-
T ss_pred HHHHHHHhHHhccCCCCCCeECHHHHHHHHhh------hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccC-
Confidence 345788899 789999999999999998743 36889999998874 78899999999999987653
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-CCC---------CCHHHHHHHHHhhCcC----CCCceeHHHHHHHH
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-GER---------LSDEETEQMIREADLD----GDGLVSFEEFARMM 146 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-~~~---------~~~~~~~~~~~~~d~~----~~g~i~~~ef~~~l 146 (149)
.+++..+|+.+|.+++|+|+.+||+.+|... |.. ++++++..+++.++.+ ++|.|++++|.++|
T Consensus 218 --r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L 295 (799)
T 2zkm_X 218 --RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFL 295 (799)
T ss_dssp --CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHH
T ss_pred --HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcc
Confidence 3789999999999999999999999999987 554 6788999999999988 89999999999998
Q ss_pred hc
Q 032008 147 MA 148 (149)
Q Consensus 147 ~~ 148 (149)
.+
T Consensus 296 ~S 297 (799)
T 2zkm_X 296 CG 297 (799)
T ss_dssp HS
T ss_pred cC
Confidence 64
No 114
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.75 E-value=1e-16 Score=101.83 Aligned_cols=122 Identities=16% Similarity=0.284 Sum_probs=105.1
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHh
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAF 90 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f 90 (149)
..+..+|..+|.+++|.|+.++|..++... ..+..+|..+|.+++|.|+.+||...+.........+.+..++
T Consensus 73 ~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~ 145 (198)
T 1juo_A 73 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIA 145 (198)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHH-------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 345667888999999999999999988754 5799999999999999999999999998765555668899999
Q ss_pred hhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeH--HHHHHHHh
Q 032008 91 KVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSF--EEFARMMM 147 (149)
Q Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~--~ef~~~l~ 147 (149)
+.+ +++|.|+.+||..++... ..+..+|+.+|.+++|.|+. .+|+..+.
T Consensus 146 ~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~is~~~~~~l~~~~ 196 (198)
T 1juo_A 146 KRY--STNGKITFDDYIACCVKL------RALTDSFRRRDTAQQGVVNFPYDDFIQCVM 196 (198)
T ss_dssp HHT--CSSSSEEHHHHHHHHHHH------HHHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred HHh--CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEeecHHHHHHHHh
Confidence 998 899999999999999875 57899999999999999987 67766543
No 115
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.75 E-value=1.7e-17 Score=125.85 Aligned_cols=135 Identities=22% Similarity=0.307 Sum_probs=106.6
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc----------
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK---------- 79 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~---------- 79 (149)
++++..+|..+|.+++|.|+.+||..++..+ +..++..++..++..++ +++|.|++++|+.++.....
T Consensus 606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~ 683 (900)
T 1qxp_A 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAA-GFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDP 683 (900)
T ss_dssp HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHT-TEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHhhCCCCCCeECHHHHHHHHHHh-CCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCC
Confidence 3678899999999999999999999999999 88999999999999999 99999999999888753200
Q ss_pred -------------------------------------------cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC--
Q 032008 80 -------------------------------------------ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG-- 114 (149)
Q Consensus 80 -------------------------------------------~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~-- 114 (149)
......+..+|+.+|.+ +|.|+.+||..++...+
T Consensus 684 d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~ 762 (900)
T 1qxp_A 684 ENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTR 762 (900)
T ss_dssp SCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----
T ss_pred CCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhccc
Confidence 00012345566666665 67778888888887765
Q ss_pred ------CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 115 ------ERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 115 ------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..++.+.++.++..+|.|++|.|+++||..++.
T Consensus 763 ~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~ 801 (900)
T 1qxp_A 763 HPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN 801 (900)
T ss_dssp CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHH
Confidence 356789999999999999999999999998875
No 116
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.74 E-value=2.1e-17 Score=103.66 Aligned_cols=117 Identities=18% Similarity=0.213 Sum_probs=98.4
Q ss_pred cHHHHHHHHHHhcCCCCCHHHHHHHHhhccC-CCCCcccHHHHHHHHHhhccc-CcHHHHHHHhhhhcCCCCCcccHHHH
Q 032008 29 TMKDLATVIQSAQDEHPRKEEVQEMISEVDF-DGNGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAEL 106 (149)
Q Consensus 29 ~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~-~~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~f~~~D~~~~g~i~~~e~ 106 (149)
+.+++..+.... ..+.+++..++..++. +++|.|++.+|...+...... .....+..+|+.+|.+++|.|+.+||
T Consensus 2 ~~~el~~l~~~~---~~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef 78 (183)
T 1s6c_A 2 RPEGLEQLEAQT---NFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF 78 (183)
T ss_dssp ----CHHHHHHS---SCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred ChHHHHHHHHhc---CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 456667766644 4588889999999988 899999999999999876554 45688999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 107 RNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..++...+...+.+.+..+|..+|.+++|.|+++||..++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 120 (183)
T 1s6c_A 79 VTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120 (183)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 999998776678889999999999999999999999998753
No 117
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.74 E-value=4.9e-17 Score=102.51 Aligned_cols=122 Identities=21% Similarity=0.258 Sum_probs=105.7
Q ss_pred CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCC-CCCcccHHHHHHHHHhhcc-cCcHHHHHHHhhhhcCCCCCcc
Q 032008 24 SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMK-ENVSEELKEAFKVFDRDQDGFI 101 (149)
Q Consensus 24 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~-~~~~~~~~~~f~~~D~~~~g~i 101 (149)
..+.++.+++..+... ...+..++..+|..++.+ ++|.|+.+||...+....+ ......+..+|+.+|.+++|.|
T Consensus 4 ~~~~l~~~~l~~l~~~---~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i 80 (190)
T 1g8i_A 4 SNSKLKPEVVEELTRK---TYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRI 80 (190)
T ss_dssp CCCSCCHHHHHHHHHT---SSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEE
T ss_pred ccccCCHHHHHHHHHc---cCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeE
Confidence 3457889999988763 456899999999999988 8999999999999987633 2344679999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 102 SAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 102 ~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+||..++...+...+.+.+..+|..+|.+++|.|+++||..++..
T Consensus 81 ~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~ 127 (190)
T 1g8i_A 81 EFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127 (190)
T ss_dssp EHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred eHHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence 99999999998876677889999999999999999999999998753
No 118
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.72 E-value=5.6e-17 Score=105.05 Aligned_cols=121 Identities=17% Similarity=0.185 Sum_probs=100.3
Q ss_pred CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCC-CCCcccHHHHHHHHHhhccc-CcHHHHHHHhhhhcCCCCCcc
Q 032008 24 SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMKE-NVSEELKEAFKVFDRDQDGFI 101 (149)
Q Consensus 24 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~-~~~~~~~~~f~~~D~~~~g~i 101 (149)
..+.++.+++..++... + ++..++..++..++.. ++|.|+.++|...+...... .....+..+|+.+|.+++|.|
T Consensus 30 ~~~~l~~~~l~~l~~~~-~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I 106 (224)
T 1s1e_A 30 TMVCHRPEGLEQLEAQT-N--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSV 106 (224)
T ss_dssp --------CHHHHHHHS-S--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCB
T ss_pred CccCCCHHHHHHHHHHc-C--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcE
Confidence 35788888899988765 4 7899999999999884 89999999999999876543 456889999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 102 SAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 102 ~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+||..++...+.....+.+..+|..+|.|++|.|+++||..++.
T Consensus 107 ~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~ 152 (224)
T 1s1e_A 107 KFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 152 (224)
T ss_dssp CHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHH
T ss_pred eHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHH
Confidence 9999999999877667788999999999999999999999999875
No 119
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.70 E-value=5.5e-17 Score=96.53 Aligned_cols=99 Identities=21% Similarity=0.345 Sum_probs=86.9
Q ss_pred HHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHH---HhCCCCCHHHHHHHH
Q 032008 50 VQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMM---NLGERLSDEETEQMI 126 (149)
Q Consensus 50 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~---~~~~~~~~~~~~~~~ 126 (149)
++.+|..+|.+++|.|+++||...+.........+.+..+|+.+|.+++|.|+.+||..++. ..+...+..++..+|
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f 81 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY 81 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence 57889999999999999999999998776666668899999999999999999999999886 334444567799999
Q ss_pred HhhCcCCCCceeHHHHHHHHhc
Q 032008 127 READLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|.+++|.|+++||..++..
T Consensus 82 ~~~D~d~~G~i~~~e~~~~l~~ 103 (134)
T 1jfj_A 82 KLMDVDGDGKLTKEEVTSFFKK 103 (134)
T ss_dssp HHHCCSSSSEEEHHHHHHHHTT
T ss_pred HHHCCCCCCccCHHHHHHHHHH
Confidence 9999999999999999998864
No 120
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=99.70 E-value=1.1e-17 Score=101.25 Aligned_cols=96 Identities=21% Similarity=0.344 Sum_probs=52.0
Q ss_pred HHHHhhccCCCCCcccHHHHHHHHHhhcc-----cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC--------CCC
Q 032008 51 QEMISEVDFDGNGSIDFLEFLTIMGRKMK-----ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG--------ERL 117 (149)
Q Consensus 51 ~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-----~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~--------~~~ 117 (149)
...|..+|.+++|.|+++||+..+..... ....+.+..+|+.+|.+++|+|+.+||..++..++ ..+
T Consensus 30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~ 109 (143)
T 3a4u_B 30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLM 109 (143)
T ss_dssp ---------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------C
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCC
Confidence 45677778888888888888777655432 12336788999999999999999999999988763 568
Q ss_pred CHHHHHHHH----HhhCcCCCCceeHHHHHHHH
Q 032008 118 SDEETEQMI----READLDGDGLVSFEEFARMM 146 (149)
Q Consensus 118 ~~~~~~~~~----~~~d~~~~g~i~~~ef~~~l 146 (149)
+++++..++ ..+|.|++|.|+++||+.++
T Consensus 110 s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 110 SEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 888886555 99999999999999998765
No 121
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.69 E-value=2.7e-16 Score=100.29 Aligned_cols=105 Identities=15% Similarity=0.200 Sum_probs=94.7
Q ss_pred CCCHHHHHHHHhhccCC-CCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHH
Q 032008 44 HPRKEEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEET 122 (149)
Q Consensus 44 ~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~ 122 (149)
..+..+++.+|..+|.+ ++|.|+.+||..++.........+.+..+|+.+|.+++|.|+.+||..++...+...+.+.+
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~ 97 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 97 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence 34677899999999999 89999999999999876665666889999999999999999999999999998877888899
Q ss_pred HHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 123 EQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 123 ~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|..+|.+++|.|+++||..++..
T Consensus 98 ~~~F~~~D~d~~G~I~~~E~~~~l~~ 123 (204)
T 1jba_A 98 KWTFKIYDKDRNGCIDRQELLDIVES 123 (204)
T ss_dssp HHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999999998753
No 122
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.69 E-value=1.2e-15 Score=91.73 Aligned_cols=101 Identities=19% Similarity=0.240 Sum_probs=90.4
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN-LGERLSDEETEQMI 126 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~ 126 (149)
..+..+|..+|.+++|.|+..+|...+...........+..+|+.+|.+++|.|+.+||..++.. .........+..+|
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F 85 (142)
T 2bl0_C 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAF 85 (142)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 46788999999999999999999999987766667788999999999999999999999999986 34455788899999
Q ss_pred HhhCcCCCCceeHHHHHHHHhc
Q 032008 127 READLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|.+++|.|+.+||..++..
T Consensus 86 ~~~D~d~~G~i~~~el~~~l~~ 107 (142)
T 2bl0_C 86 RTFDPEGTGYIPKAALQDALLN 107 (142)
T ss_dssp HHTCCSSCSCEEHHHHHHHHHH
T ss_pred HHHCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999998864
No 123
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.69 E-value=5.5e-16 Score=98.41 Aligned_cols=105 Identities=21% Similarity=0.241 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc------c
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK------E 80 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~------~ 80 (149)
+.....+..+|..+|.+++|.|+..+|..++... +...+...+..+|..+|.+++|.|++++|..++..... .
T Consensus 48 ~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~-~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~ 126 (198)
T 2r2i_A 48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLV-LKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEA 126 (198)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-SSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSC
T ss_pred cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHH-ccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCch
Confidence 4445568899999999999999999999999988 77778889999999999999999999999999976531 2
Q ss_pred Cc-HHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 81 NV-SEELKEAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 81 ~~-~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
.. .+.+..+|+.+|.+++|.|+.+||..++..
T Consensus 127 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 127 MTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp CCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 22 355899999999999999999999998863
No 124
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.69 E-value=3e-16 Score=100.25 Aligned_cols=122 Identities=19% Similarity=0.214 Sum_probs=91.7
Q ss_pred CCCCCCccHHHHHHHHHHhcCCCCCHH---HHHHHHhhccCC--CCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCC
Q 032008 22 KDSDGLITMKDLATVIQSAQDEHPRKE---EVQEMISEVDFD--GNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRD 96 (149)
Q Consensus 22 ~~~~g~i~~~e~~~~l~~~~~~~~~~~---~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~ 96 (149)
++++|.++.+++..+.... + .+.. .+..+|..+|.+ ++|.|+.+||...+.. ........+..+|+.+|.+
T Consensus 11 ~~~~g~l~~~el~~l~~~~-~--~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d 86 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASVT-P--FTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVK 86 (207)
T ss_dssp ----------CHHHHHHHS-S--CCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTT
T ss_pred hccccccCHHHHHHHHHhC-C--CCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCC
Confidence 3678999999999987755 3 3443 466788889998 9999999999998865 2222225678899999999
Q ss_pred CCCcccHHHHHHHHHHhCCC-CCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 97 QDGFISAAELRNVMMNLGER-LSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 97 ~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
++|.|+.+||..++...+.. ...+.+..+|..+|.|++|.|+.+||..++.
T Consensus 87 ~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 138 (207)
T 2ehb_A 87 RNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVV 138 (207)
T ss_dssp CSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred CCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 99999999999999887643 4567799999999999999999999999874
No 125
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.68 E-value=8.8e-16 Score=114.95 Aligned_cols=129 Identities=12% Similarity=0.267 Sum_probs=111.9
Q ss_pred HHHHHHHhh--hcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCC-------CCCcccHHHHHHHHHhhcccC
Q 032008 11 AEFQEAFCM--IDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD-------GNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 11 ~~l~~~f~~--~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~-------~~g~i~~~ef~~~~~~~~~~~ 81 (149)
..++++|.. +|.|++|.|+.+++..++.. ...++..++..++.+ ++|.|+++||..++......
T Consensus 150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~------~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~R- 222 (885)
T 3ohm_B 150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA------DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCLR- 222 (885)
T ss_dssp HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG------GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHhcCccCCCCccCHHHHHHHHhc------CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCCH-
Confidence 456778887 79999999999999887753 467888999988876 78899999999999876543
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC-C---------CCCHHHHHHHHHhhCcC----CCCceeHHHHHHHHh
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLG-E---------RLSDEETEQMIREADLD----GDGLVSFEEFARMMM 147 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~-~---------~~~~~~~~~~~~~~d~~----~~g~i~~~ef~~~l~ 147 (149)
+++..+|+.+|.+++|+||.+||..+|...+ . .++.+++..+++.++.+ ++|.|++++|.++|.
T Consensus 223 --~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~ 300 (885)
T 3ohm_B 223 --PDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLG 300 (885)
T ss_dssp --HHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHT
T ss_pred --HHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhcc
Confidence 6899999999999999999999999999985 3 26889999999999988 689999999999986
Q ss_pred c
Q 032008 148 A 148 (149)
Q Consensus 148 ~ 148 (149)
+
T Consensus 301 S 301 (885)
T 3ohm_B 301 G 301 (885)
T ss_dssp S
T ss_pred C
Confidence 4
No 126
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=90.23 Aligned_cols=64 Identities=52% Similarity=0.826 Sum_probs=61.3
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHH
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l 146 (149)
.++++.+|+.+|.+++|+|+.+||+.+++.+|..++++++..++..+|.|++|.|+|+||+++|
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 3679999999999999999999999999999999999999999999999999999999999876
No 127
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.67 E-value=2.4e-17 Score=91.50 Aligned_cols=86 Identities=29% Similarity=0.509 Sum_probs=73.0
Q ss_pred CCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeH
Q 032008 60 DGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSF 139 (149)
Q Consensus 60 ~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~ 139 (149)
+++|.|++++ ..+...+.....+.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|.+++|.|++
T Consensus 1 ~~~G~i~~~e--~~~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~ 78 (87)
T 1s6j_A 1 HSSGHIDDDD--KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78 (87)
T ss_dssp CCSSSSSSHH--HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCCccCccH--HHHHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcH
Confidence 4678999999 23333333333466889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 032008 140 EEFARMMM 147 (149)
Q Consensus 140 ~ef~~~l~ 147 (149)
+||+.++.
T Consensus 79 ~eF~~~~~ 86 (87)
T 1s6j_A 79 GEFIAATV 86 (87)
T ss_dssp HHHTTCCC
T ss_pred HHHHHHHh
Confidence 99987653
No 128
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=99.66 E-value=9.7e-16 Score=84.79 Aligned_cols=75 Identities=31% Similarity=0.486 Sum_probs=66.9
Q ss_pred CchhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 1 ~~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
|+..+++++.+++..+|..+|.+++|.|+.+++..++..+ + .++..++..++..+|.+++|.|++++|+.++...
T Consensus 1 m~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTL-G-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp -----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTT-T-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred CCccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHc-C-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 6778999999999999999999999999999999999998 7 8999999999999999999999999999988654
No 129
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.65 E-value=1.4e-15 Score=98.71 Aligned_cols=111 Identities=18% Similarity=0.288 Sum_probs=93.8
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc------------cc
Q 032008 13 FQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM------------KE 80 (149)
Q Consensus 13 l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~------------~~ 80 (149)
+..+|..+|.+++|.|+.+||..++... ......+.+..+|..+|.+++|.|+.+||..++.... ..
T Consensus 104 ~~~lf~~~D~d~~G~I~~~Ef~~~l~~~-~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~ 182 (229)
T 3dd4_A 104 AHFLFNAFDTDHNGAVSFEDFIKGLSIL-LRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKED 182 (229)
T ss_dssp HHHHHHTTCSSCCSSCCHHHHHHHHHHH-HHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHcCCCCCCeEeHHHHHHHHHHH-cCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchh
Confidence 5678999999999999999999999887 5566678899999999999999999999999987652 12
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREAD 130 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
...+.+..+|+.+|.+++|.|+.+||..++.. ...+..+++.+|
T Consensus 183 ~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~------~~~~~~~~~~~D 226 (229)
T 3dd4_A 183 APRQHVETFFQKMDKNKDGVVTIDEFIESCQK------DENIMRSMQLFE 226 (229)
T ss_dssp -CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT------CHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh------CHHHHHHHHhcc
Confidence 23378999999999999999999999999984 235777777776
No 130
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.65 E-value=1.7e-16 Score=90.24 Aligned_cols=70 Identities=36% Similarity=0.736 Sum_probs=66.7
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHH
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 74 (149)
.++++++++++++|..+|.+++|.|+.+||..++..+ |..++..++..++..+|.+++|.|+|+||+.+|
T Consensus 29 ~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~l-g~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp CCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHH-TCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 4788899999999999999999999999999999999 999999999999999999999999999999875
No 131
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.65 E-value=8.1e-16 Score=101.43 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=100.8
Q ss_pred CCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCC-CCCcccHHHHHHHHHhhcc-cCcHHHHHHHhhhhcCCCCCccc
Q 032008 25 DGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMK-ENVSEELKEAFKVFDRDQDGFIS 102 (149)
Q Consensus 25 ~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~-~~~~~~~~~~f~~~D~~~~g~i~ 102 (149)
.+.++.+++..+.... ..+.+++..++..++.. ++|.|++++|...+..... ......+..+|+.+|.+++|.|+
T Consensus 71 ~~~l~~e~l~~l~~~~---~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~ 147 (256)
T 2jul_A 71 TVRHQPEGLDQLQAQT---KFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIH 147 (256)
T ss_dssp -----CTHHHHHHHHT---TSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEEC
T ss_pred cccCCHHHHHHHHHHh---CCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCc
Confidence 3556677788877644 47889999999999875 7999999999999987653 34457899999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 103 AAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 103 ~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.+||..++...+...+.+++..+|..+|.|++|.|+++||..++.
T Consensus 148 ~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~ 192 (256)
T 2jul_A 148 FEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMK 192 (256)
T ss_dssp SHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 999999999887778889999999999999999999999999875
No 132
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.64 E-value=3.5e-15 Score=110.70 Aligned_cols=122 Identities=15% Similarity=0.258 Sum_probs=107.1
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.+..+|..+|.+++|.|+.+||..++... +.+..+|..+|.+++|.|+.+||...+.........+.+..+++
T Consensus 576 ~~~~l~~~~D~d~~G~I~f~EF~~l~~~~-------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~ 648 (714)
T 3bow_A 576 TCKIMVDMLDEDGSGKLGLKEFYILWTKI-------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVA 648 (714)
T ss_dssp HHHHHHHHHCCSSCSSBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 45567888999999999999999988754 67999999999999999999999999987655566688999999
Q ss_pred hhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 92 VFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.+| +++|.|+.+||..++... +.+..+|..+|.|++|.|+.+|+..++.
T Consensus 649 ~~D-d~dG~Isf~EF~~~l~~~------~~l~~~F~~~D~d~dG~Is~~el~~l~~ 697 (714)
T 3bow_A 649 RFA-DDELIIDFDNFVRCLVRL------EILFKIFKQLDPENTGTIQLDLISWLSF 697 (714)
T ss_dssp HHS-CTTCEECHHHHHHHHHHH------HHHHHHHSSSCSSCCSEEEEEHHHHHHH
T ss_pred HhC-CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence 999 999999999999999864 4788999999999999999998876543
No 133
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=99.64 E-value=1.5e-15 Score=83.85 Aligned_cols=79 Identities=34% Similarity=0.560 Sum_probs=72.9
Q ss_pred CchhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhccc
Q 032008 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE 80 (149)
Q Consensus 1 ~~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 80 (149)
|+..+++.+.+++..+|..+|.+++|.|+.++|..++..+ |..++..++..++..+|.+++|.|++++|+.++......
T Consensus 4 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~ 82 (85)
T 2ktg_A 4 QKKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRAL-GANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEYGQE 82 (85)
T ss_dssp CCCSSSHHHHHHHHHHHHHTCTTCCSEEEHHHHHHHHHTT-SSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHHSSS
T ss_pred hhhhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc
Confidence 4567899999999999999999999999999999999998 899999999999999999999999999999998766543
No 134
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.64 E-value=1.6e-15 Score=95.58 Aligned_cols=105 Identities=23% Similarity=0.381 Sum_probs=90.2
Q ss_pred CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh-----------cccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 032008 43 EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK-----------MKENVSEELKEAFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-----------~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
.......+..+|..+|.+++|.|+++||...+... ......+.+..+|+.+|.+++|.|+.+||..++.
T Consensus 35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~ 114 (191)
T 3khe_A 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCM 114 (191)
T ss_dssp CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 34456789999999999999999999999988765 2233447889999999999999999999999986
Q ss_pred HhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 112 NLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
........+.+..+|..+|.+++|.|+.+||..++.
T Consensus 115 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 115 DKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp CHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred HhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 655556788999999999999999999999998864
No 135
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.64 E-value=4.7e-15 Score=90.69 Aligned_cols=100 Identities=13% Similarity=0.213 Sum_probs=87.7
Q ss_pred HHHHHHhhcc-CCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCC-----CCHHHH
Q 032008 49 EVQEMISEVD-FDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER-----LSDEET 122 (149)
Q Consensus 49 ~~~~~~~~~d-~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~-----~~~~~~ 122 (149)
.+..+|..+| .+++|.|+..+|...+...........+..+|+.+|.+++|.|+++||..++...... .....+
T Consensus 14 ~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~ 93 (158)
T 2jnf_A 14 LLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQEL 93 (158)
T ss_dssp HHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTH
T ss_pred HHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHH
Confidence 4678899999 9999999999999999876656667889999999999999999999999999876432 455679
Q ss_pred HHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 123 EQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 123 ~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|..+|.+++|.|+.+||..++..
T Consensus 94 ~~~F~~~D~d~~G~I~~~el~~~l~~ 119 (158)
T 2jnf_A 94 REAFRLYDKEGNGYISTDVMREILAE 119 (158)
T ss_dssp HHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 99999999999999999999998753
No 136
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=99.64 E-value=2e-17 Score=97.63 Aligned_cols=101 Identities=18% Similarity=0.280 Sum_probs=53.6
Q ss_pred HHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHH-----HHHhhccc-CcHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 032008 37 IQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLT-----IMGRKMKE-NVSEELKEAFKVFDRDQDGFISAAELRNVM 110 (149)
Q Consensus 37 l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~-----~~~~~~~~-~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l 110 (149)
++.+ |.+++..++..++..+ +|.|++++|+. ++...... ...+.+..+|+.+| |+|+.+|++.++
T Consensus 2 lr~l-G~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l 72 (123)
T 2kld_A 2 STAI-GINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDL 72 (123)
T ss_dssp ------------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHT
T ss_pred hhhc-CCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHH
Confidence 3455 8888999999888766 78999999998 65543322 22256788999998 999999999999
Q ss_pred HHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 111 MNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|. +++++..++..+|.|++|.|+|+||+.++.+
T Consensus 73 ~~lG~--t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~ 108 (123)
T 2kld_A 73 KGKGH--TDAEIEAIFTKYDQDGDQELTEHEHQQMRDD 108 (123)
T ss_dssp TTCCS--SHHHHHHHHHHHSSSSCCEECSHHHHHCSCT
T ss_pred HHhCC--CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 99887 9999999999999999999999999987653
No 137
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.63 E-value=6.7e-15 Score=91.44 Aligned_cols=102 Identities=23% Similarity=0.319 Sum_probs=83.1
Q ss_pred HHHHHHHHhhccCCCCCcccHHHHHH----HHHhhcccCcHHHHH-----------HHhhhhcCCCCCcccHHHHHHHHH
Q 032008 47 KEEVQEMISEVDFDGNGSIDFLEFLT----IMGRKMKENVSEELK-----------EAFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 47 ~~~~~~~~~~~d~~~~g~i~~~ef~~----~~~~~~~~~~~~~~~-----------~~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
...++.+|..+|.+++|.|+.+||.. ++.........+.+. .+|+.+|.+++|.|+.+||..++.
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~ 85 (176)
T 1nya_A 6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE 85 (176)
T ss_dssp HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 34678899999999999999999998 444433333334443 899999999999999999999998
Q ss_pred HhCCCCCH--------HHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 112 NLGERLSD--------EETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 112 ~~~~~~~~--------~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
........ ..+..+|..+|.+++|.|+.+||..++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~ 130 (176)
T 1nya_A 86 NLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA 130 (176)
T ss_dssp HHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHH
T ss_pred HHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 87544443 66899999999999999999999998764
No 138
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=99.63 E-value=3.4e-14 Score=92.93 Aligned_cols=136 Identities=14% Similarity=0.164 Sum_probs=106.2
Q ss_pred HHHHHHHHhhhcC-CCCCCccHHHHHHHHHHhcC-------CCCC-----HHHHHHHHhhccCCCCCcccHHHHHHHHHh
Q 032008 10 IAEFQEAFCMIDK-DSDGLITMKDLATVIQSAQD-------EHPR-----KEEVQEMISEVDFDGNGSIDFLEFLTIMGR 76 (149)
Q Consensus 10 ~~~l~~~f~~~d~-~~~g~i~~~e~~~~l~~~~~-------~~~~-----~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 76 (149)
+..+.++|+...- .++..++..++...|..++. ..++ ..-+..+|..+|.+++|.|++.+|+..+..
T Consensus 81 l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~ 160 (261)
T 1eg3_A 81 LSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS 160 (261)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHHH
Confidence 4455666766543 34568888888777766641 1122 223566899999999999999999999999
Q ss_pred hcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-------C------CCCCHHHHHHHHHhhCcCCCCceeHHHHH
Q 032008 77 KMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-------G------ERLSDEETEQMIREADLDGDGLVSFEEFA 143 (149)
Q Consensus 77 ~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-------~------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~ 143 (149)
...+...+.++.+|+.+| |++|+|+..|+..+++.+ | ....++.++.+|+.++ ++|.||.+||+
T Consensus 161 l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl 237 (261)
T 1eg3_A 161 LCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFL 237 (261)
T ss_dssp TSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHH
T ss_pred HcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHH
Confidence 888888899999999999 999999999999999652 2 2335677899999996 78999999999
Q ss_pred HHHhc
Q 032008 144 RMMMA 148 (149)
Q Consensus 144 ~~l~~ 148 (149)
..+++
T Consensus 238 ~~~~~ 242 (261)
T 1eg3_A 238 DWMRL 242 (261)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 87653
No 139
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.63 E-value=8.9e-15 Score=84.36 Aligned_cols=102 Identities=22% Similarity=0.275 Sum_probs=84.8
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh---cc
Q 032008 3 DALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK---MK 79 (149)
Q Consensus 3 ~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~ 79 (149)
..+++.++++ +|..+|. +|.|+.++|..++. ........+..+|..+|.+++|.|+..+|...+... ..
T Consensus 4 ~~~s~~ei~~---~~~~~d~--~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~ 75 (109)
T 5pal_A 4 KVLKADDINK---AISAFKD--PGTFDYKRFFHLVG---LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR 75 (109)
T ss_dssp GTSCHHHHHH---HHHHTCS--TTCCCHHHHHHHHT---CTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred CcCCHHHHHH---HHHHhCC--CCcCcHHHHHHHHh---hccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCC
Confidence 3456666555 4566665 89999999999875 235578899999999999999999999999999876 45
Q ss_pred cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 80 ENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 80 ~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
....+.+..+|+.+|.+++|.|+++||..++..
T Consensus 76 ~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 76 DLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 556688999999999999999999999998875
No 140
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.63 E-value=3.3e-15 Score=91.60 Aligned_cols=101 Identities=26% Similarity=0.339 Sum_probs=87.4
Q ss_pred HHHHHHHhhccCCC-CCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC----CCCCHHHH
Q 032008 48 EEVQEMISEVDFDG-NGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG----ERLSDEET 122 (149)
Q Consensus 48 ~~~~~~~~~~d~~~-~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~----~~~~~~~~ 122 (149)
..+..+|..+|.++ +|.|+.++|...+.........+.+..+|+.+|.+++|.|+.+||..++.... .......+
T Consensus 18 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 97 (161)
T 1dtl_A 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEEL 97 (161)
T ss_dssp HHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHH
Confidence 34678899999999 99999999999998776666778899999999999999999999999988753 23456779
Q ss_pred HHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 123 EQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 123 ~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|..+|.+++|.|+.+||..++..
T Consensus 98 ~~~F~~~D~d~~G~i~~~El~~~l~~ 123 (161)
T 1dtl_A 98 SDLFRMFDKNADGYIDLEELKIMLQA 123 (161)
T ss_dssp HHHHHHHCTTCSSEEEHHHHGGGGTT
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999999887753
No 141
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.63 E-value=1e-14 Score=88.85 Aligned_cols=104 Identities=19% Similarity=0.250 Sum_probs=87.7
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh-cccCcHHHHHHHh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK-MKENVSEELKEAF 90 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~~~~~~~~f 90 (149)
.+..+|..+|.+++|.|+.++|..++............+..+|..+|.+++|.|+.++|..++... ......+.+..++
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 118 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 456789999999999999999999998773334566789999999999999999999999999873 4445556667766
Q ss_pred hh----hcCCCCCcccHHHHHHHHHHhCC
Q 032008 91 KV----FDRDQDGFISAAELRNVMMNLGE 115 (149)
Q Consensus 91 ~~----~D~~~~g~i~~~e~~~~l~~~~~ 115 (149)
+. +|.+++|.|+.+||..++...+.
T Consensus 119 ~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 147 (155)
T 3ll8_B 119 DKTIINADKDGDGRISFEEFCAVVGGLDI 147 (155)
T ss_dssp HHHHHHHCTTSSSSBCHHHHHHHHGGGCG
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHhccCc
Confidence 66 99999999999999999998753
No 142
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.63 E-value=3.8e-15 Score=89.91 Aligned_cols=101 Identities=25% Similarity=0.296 Sum_probs=87.8
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLSDEETEQMI 126 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~ 126 (149)
..+..+|..+|.+++|.|+..+|..++...........+..+|+.+|.+++|.|+.+||..++... ........+..+|
T Consensus 11 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F 90 (147)
T 4ds7_A 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAF 90 (147)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHH
Confidence 356788999999999999999999999877666777889999999999999999999999998764 2223457789999
Q ss_pred HhhCcCCCCceeHHHHHHHHhc
Q 032008 127 READLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|.+++|.|+.+||.+++..
T Consensus 91 ~~~D~d~~G~i~~~e~~~~l~~ 112 (147)
T 4ds7_A 91 KVFDKNGDGLISAAELKHVLTS 112 (147)
T ss_dssp HHHCTTCSSEECHHHHHHHHHH
T ss_pred HHhCCCCCCeECHHHHHHHHHH
Confidence 9999999999999999998864
No 143
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.62 E-value=1e-14 Score=88.54 Aligned_cols=100 Identities=23% Similarity=0.351 Sum_probs=89.1
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.+..++..+|.+++|.++..+|...+........+.+.+..+|..+|.+++|.|+.++|...+.........+.+..+++
T Consensus 47 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~ 126 (148)
T 2lmt_A 47 ELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIR 126 (148)
T ss_dssp HHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHH
Confidence 45567888999999999999999988776456677888999999999999999999999999987777777789999999
Q ss_pred hhcCCCCCcccHHHHHHHHH
Q 032008 92 VFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~ 111 (149)
.+|.|++|.|+++||.+++.
T Consensus 127 ~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 127 EADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp HHCCSCCSSEEHHHHHHHHT
T ss_pred HhCCCCCCeEeHHHHHHHHh
Confidence 99999999999999998874
No 144
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=99.62 E-value=3e-15 Score=83.54 Aligned_cols=76 Identities=49% Similarity=0.755 Sum_probs=71.0
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
++.+++.++.++..+|..+|.+++|.|+.++|..++..+ |..++..++..++..+|.+++|.|++++|+.++....
T Consensus 11 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~~ 86 (90)
T 1avs_A 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQM 86 (90)
T ss_dssp HHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHh
Confidence 456899999999999999999999999999999999999 9999999999999999999999999999999887654
No 145
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=99.62 E-value=1.6e-15 Score=92.15 Aligned_cols=89 Identities=15% Similarity=0.312 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHH
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL 86 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 86 (149)
+.++.++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++++|+.++... .+.+
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~-g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~ 117 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKL-GVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAI 117 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGG
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHH
Confidence 5788899999999999999999999999999998 899999999999999999999999999999988643 3568
Q ss_pred HHHhhhhcCCCCCcc
Q 032008 87 KEAFKVFDRDQDGFI 101 (149)
Q Consensus 87 ~~~f~~~D~~~~g~i 101 (149)
..+|+.+|.+++|..
T Consensus 118 ~~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 118 LRMILMYEEKNKEHK 132 (147)
T ss_dssp GGGGGGCCCC-----
T ss_pred HHHHHHHccCCCCCC
Confidence 889999999999884
No 146
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.62 E-value=5.8e-15 Score=85.15 Aligned_cols=99 Identities=18% Similarity=0.245 Sum_probs=82.4
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh---cccC
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK---MKEN 81 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~ 81 (149)
+++.+++ .+|..+| ++|.|+.++|..++.. .......+..+|..+|.+++|.|+.+++...+... ....
T Consensus 7 ~~~~ei~---~~~~~~D--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~ 78 (109)
T 3fs7_A 7 LSAKDIE---SALSSCQ--AADSFNYKSFFSTVGL---SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL 78 (109)
T ss_dssp SCHHHHH---HHHHHTC--STTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCC
T ss_pred CCHHHHH---HHHHhcC--CCCcCcHHHHHHHHhc---CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccC
Confidence 4555554 4566666 7899999999998753 35678889999999999999999999999988776 4455
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
..+.+..+++.+|.+++|.|+++||..+++
T Consensus 79 ~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 79 TSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 668899999999999999999999998875
No 147
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.62 E-value=8.2e-15 Score=89.79 Aligned_cols=101 Identities=20% Similarity=0.257 Sum_probs=88.8
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.+..+|..+|.+++|.|+.++|..++............+..+|..+|.+++|.|+.++|..++.........+.+..+|+
T Consensus 60 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~ 139 (161)
T 3fwb_A 60 EILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIE 139 (161)
T ss_dssp HHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 35667889999999999999999988765344556778999999999999999999999999987766667789999999
Q ss_pred hhcCCCCCcccHHHHHHHHHH
Q 032008 92 VFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~~ 112 (149)
.+|.+++|.|+.+||..++..
T Consensus 140 ~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 140 EFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp TTCSSSSSSEEHHHHHHHHHH
T ss_pred HhCCCCCCcCcHHHHHHHHhc
Confidence 999999999999999998864
No 148
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.62 E-value=6.7e-15 Score=89.34 Aligned_cols=100 Identities=24% Similarity=0.236 Sum_probs=86.9
Q ss_pred HHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCC-----CHHHHH
Q 032008 49 EVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERL-----SDEETE 123 (149)
Q Consensus 49 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~-----~~~~~~ 123 (149)
.+..+|..+|.+++|.|+..+|..++...........+..+|+.+|.+++|.|+.+||..++....... ..+.+.
T Consensus 12 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T 3ox6_A 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELR 91 (153)
T ss_dssp HHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHH
Confidence 467788899999999999999999998776667778899999999999999999999999987653322 257789
Q ss_pred HHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 124 QMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 124 ~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|..+|.+++|.|+.+||..++..
T Consensus 92 ~~F~~~D~d~~G~i~~~el~~~l~~ 116 (153)
T 3ox6_A 92 DAFREFDTNGDGEISTSELREAMRA 116 (153)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999998754
No 149
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.62 E-value=3.4e-15 Score=90.15 Aligned_cols=100 Identities=29% Similarity=0.405 Sum_probs=83.5
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.+..++..+|.+++|.|+.++|..++........+...+..+|..+|.+++|.|+..+|..++.........+++..+++
T Consensus 43 ~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~ 122 (143)
T 2obh_A 43 EIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMID 122 (143)
T ss_dssp HHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 45567888999999999999999887654122223467899999999999999999999999877655566789999999
Q ss_pred hhcCCCCCcccHHHHHHHHH
Q 032008 92 VFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~ 111 (149)
.+|.+++|.|+++||..++.
T Consensus 123 ~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 123 EADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHCTTSSSSBCHHHHHHHHC
T ss_pred HhCCCCCCcEeHHHHHHHHc
Confidence 99999999999999988763
No 150
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.61 E-value=1.4e-15 Score=96.76 Aligned_cols=101 Identities=17% Similarity=0.244 Sum_probs=86.9
Q ss_pred HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHH
Q 032008 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMI 126 (149)
Q Consensus 47 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~ 126 (149)
...++.+|..+|.+++|.|+..||...+.........+.+..+|+.+|.+++|.|+.+||..++.........+.+..+|
T Consensus 36 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F 115 (204)
T 3e3r_A 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAF 115 (204)
T ss_dssp ----CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHH
Confidence 34678899999999999999999999998776667778999999999999999999999999887654444567799999
Q ss_pred HhhCcCCCCceeHHHHHHHHh
Q 032008 127 READLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..+|.+++|.|+.+||..++.
T Consensus 116 ~~~D~d~~G~I~~~El~~~l~ 136 (204)
T 3e3r_A 116 AKLDRSGDGVVTVDDLRGVYS 136 (204)
T ss_dssp HHHCTTCSSEECHHHHHHHCC
T ss_pred HHhCcCCCCeEeHHHHHHHHc
Confidence 999999999999999998875
No 151
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=99.61 E-value=2.9e-15 Score=91.33 Aligned_cols=89 Identities=19% Similarity=0.344 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHH
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEEL 86 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 86 (149)
..+..++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++++|+.++... ...+
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i 119 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKL-GVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAV 119 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCH
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHc-CCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHH
Confidence 4566778888888888888888888888888888 788888888888888888888888888888887644 2347
Q ss_pred HHHhhhhcCCCCCcc
Q 032008 87 KEAFKVFDRDQDGFI 101 (149)
Q Consensus 87 ~~~f~~~D~~~~g~i 101 (149)
..+|+.+|.+++|.-
T Consensus 120 ~~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 120 LKLVMMFEGKANESS 134 (150)
T ss_dssp HHHHHC---------
T ss_pred HHHHHHHcCCCCCCC
Confidence 888888888888874
No 152
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.61 E-value=1.3e-15 Score=96.83 Aligned_cols=101 Identities=18% Similarity=0.330 Sum_probs=78.0
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIR 127 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 127 (149)
..+..+|..+|.+++|.|+.+||...+...........+..+|+.+|.+++|.|+++||...+.........+.+..+|.
T Consensus 57 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~ 136 (197)
T 3pm8_A 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFK 136 (197)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 35688899999999999999999999987755555588999999999999999999999887655433456788999999
Q ss_pred hhCcCCCCceeHHHHHHHHhc
Q 032008 128 EADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 128 ~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|.|++|.|+.+||.+++..
T Consensus 137 ~~D~d~~G~Is~~El~~~l~~ 157 (197)
T 3pm8_A 137 FFDIDGNGKISVEELKRIFGR 157 (197)
T ss_dssp HHCTTCSSEECHHHHHHHHC-
T ss_pred HHCCCCCCCCCHHHHHHHHHh
Confidence 999999999999999998864
No 153
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.61 E-value=9.8e-16 Score=91.81 Aligned_cols=102 Identities=15% Similarity=0.049 Sum_probs=66.7
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc-cCcHHHHHHHhh
Q 032008 13 FQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK-ENVSEELKEAFK 91 (149)
Q Consensus 13 l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-~~~~~~~~~~f~ 91 (149)
..++|..+|.+++|.|+.++|..++............+..+|..+|.+++|.|+.++|...+..... ....+.+..+|+
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~ 84 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR 84 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 3568899999999999999999988654222334567999999999999999999999999887653 667789999999
Q ss_pred hhcCCCCCcccHHHHHHHHHHhC
Q 032008 92 VFDRDQDGFISAAELRNVMMNLG 114 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~~~~ 114 (149)
.+|.+++|.|+++||..++....
T Consensus 85 ~~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 85 EGDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HHCSSCSSSBCHHHHHHHHHHHH
T ss_pred HhCCCCCCCCcHHHHHHHHHHhC
Confidence 99999999999999999998753
No 154
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.61 E-value=1.7e-15 Score=91.79 Aligned_cols=99 Identities=10% Similarity=0.128 Sum_probs=85.1
Q ss_pred HHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhh-cCCCCCcccHHHHHHHHHHh------CCCCCHHHH
Q 032008 50 VQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVF-DRDQDGFISAAELRNVMMNL------GERLSDEET 122 (149)
Q Consensus 50 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~-D~~~~g~i~~~e~~~~l~~~------~~~~~~~~~ 122 (149)
++.+|..+|.+++|.|+..+|...+.........+.+..+|+.+ |.+++|.|+.+||..++... ........+
T Consensus 6 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~ 85 (148)
T 1m45_A 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF 85 (148)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHH
Confidence 45678899999999999999999998776666778899999999 99999999999999999876 444566789
Q ss_pred HHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 123 EQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 123 ~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|..+|.+++|.|+.+||..++..
T Consensus 86 ~~~F~~~D~d~~G~I~~~el~~~l~~ 111 (148)
T 1m45_A 86 VKAFQVFDKESTGKVSVGDLRYMLTG 111 (148)
T ss_dssp HHHHHTTCSSSSSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 99999999999999999999998864
No 155
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.60 E-value=8.7e-15 Score=91.55 Aligned_cols=102 Identities=21% Similarity=0.270 Sum_probs=83.6
Q ss_pred HHHHHHHHhhc-cCCCCCcccHHHHHHHHHhhc----ccCcHHHHH-----------HHhhhhcCCCCCcccHHHHHHHH
Q 032008 47 KEEVQEMISEV-DFDGNGSIDFLEFLTIMGRKM----KENVSEELK-----------EAFKVFDRDQDGFISAAELRNVM 110 (149)
Q Consensus 47 ~~~~~~~~~~~-d~~~~g~i~~~ef~~~~~~~~----~~~~~~~~~-----------~~f~~~D~~~~g~i~~~e~~~~l 110 (149)
...+..+|..+ |.+++|.|+++||...+.... .....+.+. .+|+.+|.+++|.|+.+||..++
T Consensus 7 ~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 86 (185)
T 2sas_A 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence 34678899999 999999999999988887665 344444444 44999999999999999999998
Q ss_pred HHhCC---------CCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 111 MNLGE---------RLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 111 ~~~~~---------~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..... ......+..+|..+|.|++|.|+++||.+++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~ 133 (185)
T 2sas_A 87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN 133 (185)
T ss_dssp HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTS
T ss_pred HHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence 76521 224578899999999999999999999998754
No 156
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.60 E-value=3.4e-15 Score=92.07 Aligned_cols=101 Identities=21% Similarity=0.278 Sum_probs=86.3
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIR 127 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 127 (149)
..+..+|..+|.+++|.|+..+|...+.........+.+..+|+.+|.+++|.|+.+||...+.........+.+..+|.
T Consensus 27 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~ 106 (166)
T 2aao_A 27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFT 106 (166)
T ss_dssp HHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHH
Confidence 34678899999999999999999999887655666688999999999999999999999988865432234567899999
Q ss_pred hhCcCCCCceeHHHHHHHHhc
Q 032008 128 EADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 128 ~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|.+++|.|+.+||..++..
T Consensus 107 ~~D~d~~G~i~~~e~~~~l~~ 127 (166)
T 2aao_A 107 YFDKDGSGYITPDELQQACEE 127 (166)
T ss_dssp HHCTTCSSSBCHHHHHHHTCC
T ss_pred HhCCCCCCcCcHHHHHHHHHH
Confidence 999999999999999998753
No 157
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.60 E-value=5.1e-15 Score=91.49 Aligned_cols=102 Identities=25% Similarity=0.373 Sum_probs=87.1
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHh
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAF 90 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f 90 (149)
..+..+|..+|.+++|.|+.++|..++............+..+|..+|.+++|.|+.+||..++.........+++..+|
T Consensus 64 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~ 143 (169)
T 3qrx_A 64 EEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMI 143 (169)
T ss_dssp HHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 34566788999999999999999998876533333466789999999999999999999999998776666778999999
Q ss_pred hhhcCCCCCcccHHHHHHHHHH
Q 032008 91 KVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 91 ~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
+.+|.+++|.|+.+||..++..
T Consensus 144 ~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 144 AEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHhCCCCCCCEeHHHHHHHHHh
Confidence 9999999999999999998875
No 158
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=99.60 E-value=1.7e-15 Score=88.47 Aligned_cols=70 Identities=17% Similarity=0.387 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHH-----hcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQS-----AQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
+..+..+..+|+.+|.+ +|.|+.+||+.++.. + +...+.+++..++..+|.+++|.|+|+||+.++....
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l-~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~ 85 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFL-ENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 85 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHH-TTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhc-ccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 45678999999999987 899999999999876 4 7788899999999999999999999999999987654
No 159
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.60 E-value=2.8e-15 Score=94.61 Aligned_cols=101 Identities=23% Similarity=0.337 Sum_probs=87.7
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIR 127 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 127 (149)
..+..+|..+|.+++|.|+.+||...+.........+.+..+|+.+|.+++|.|+++||...+...........+..+|.
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~ 89 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFS 89 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 35788999999999999999999999987765666688999999999999999999999998876543334457899999
Q ss_pred hhCcCCCCceeHHHHHHHHhc
Q 032008 128 EADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 128 ~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|.+++|.|+.+||..++..
T Consensus 90 ~~D~d~dG~Is~~El~~~l~~ 110 (188)
T 1s6i_A 90 YFDKDGSGYITLDEIQQACKD 110 (188)
T ss_dssp HTTTTCSSEEEHHHHHHTTTT
T ss_pred HHCCCCCCcCcHHHHHHHHHH
Confidence 999999999999999988754
No 160
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=99.60 E-value=4.7e-15 Score=78.07 Aligned_cols=64 Identities=28% Similarity=0.563 Sum_probs=60.7
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..++..+|.+++|.|+++||+.++.+
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999998875
No 161
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.60 E-value=7.2e-15 Score=90.41 Aligned_cols=96 Identities=17% Similarity=0.205 Sum_probs=82.2
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHhcCCCCC-------HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHH
Q 032008 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHPR-------KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELK 87 (149)
Q Consensus 15 ~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~-------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 87 (149)
.+|..+|.+++|.|+.++|..++... ....+ ...+..+|..+|.+++|.|+.+||..++.... ...+.+.
T Consensus 59 ~~f~~~D~d~~g~i~~~ef~~~~~~~-~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~ 135 (166)
T 3akb_A 59 GLAGIADRDGDQRITREEFVTGAVKR-LRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLAR 135 (166)
T ss_dssp HHHHHHCTTSSSCEEHHHHHHTHHHH-HHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHH-hccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHH
Confidence 77899999999999999999988766 22221 23489999999999999999999999987653 5668899
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHh
Q 032008 88 EAFKVFDRDQDGFISAAELRNVMMNL 113 (149)
Q Consensus 88 ~~f~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
.+|+.+|.+++|.|+.+||..++..+
T Consensus 136 ~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 136 QAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 99999999999999999999998764
No 162
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.60 E-value=8.6e-15 Score=91.32 Aligned_cols=102 Identities=29% Similarity=0.381 Sum_probs=87.9
Q ss_pred HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHH
Q 032008 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG-ERLSDEETEQM 125 (149)
Q Consensus 47 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~ 125 (149)
...+..+|..+|.+++|.|+..+|...+...........+..+|+.+|.+++|.|+.+||..++.... .......+..+
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~ 89 (179)
T 2f2o_A 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREA 89 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHH
Confidence 35678899999999999999999999998776666778899999999999999999999999887642 11244678999
Q ss_pred HHhhCcCCCCceeHHHHHHHHhc
Q 032008 126 IREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 126 ~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
|..+|.+++|.|+.+||..++..
T Consensus 90 F~~~D~d~~G~I~~~E~~~~l~~ 112 (179)
T 2f2o_A 90 FRVFDKDGNGYISAAELRHVMTN 112 (179)
T ss_dssp HHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHhCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999998754
No 163
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.59 E-value=8.9e-15 Score=88.70 Aligned_cols=100 Identities=27% Similarity=0.412 Sum_probs=84.7
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.+..+|..+|.+++|.|+.++|..++........+...+..+|..+|.+++|.|+.++|..++.......+.+.+..+++
T Consensus 47 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~ 126 (148)
T 1exr_A 47 ELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIR 126 (148)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 35667888999999999999999887654222234567889999999999999999999999987665666789999999
Q ss_pred hhcCCCCCcccHHHHHHHHH
Q 032008 92 VFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~ 111 (149)
.+|.+++|.|+++||..++.
T Consensus 127 ~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 127 EADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHCSSSSSSBCHHHHHHHHH
T ss_pred HhCCCCCCcEeHHHHHHHHc
Confidence 99999999999999998875
No 164
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=99.59 E-value=1.4e-14 Score=81.01 Aligned_cols=86 Identities=33% Similarity=0.551 Sum_probs=74.0
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCc--
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENV-- 82 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~-- 82 (149)
+++...+++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++++|+.++........
T Consensus 3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~ 81 (92)
T 2kn2_A 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINL-GEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGN 81 (92)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT-TCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCH
T ss_pred CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCc
Confidence 456778899999999999999999999999999999 89999999999999999999999999999999877655431
Q ss_pred -HHHHHHHhh
Q 032008 83 -SEELKEAFK 91 (149)
Q Consensus 83 -~~~~~~~f~ 91 (149)
.+.++.+|+
T Consensus 82 ~~~~l~~aF~ 91 (92)
T 2kn2_A 82 GWSRLRRKFS 91 (92)
T ss_dssp HHHHHHHHHT
T ss_pred hHHHHHHHhc
Confidence 245555554
No 165
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=99.59 E-value=6.1e-15 Score=81.55 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=70.6
Q ss_pred CchhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHH---HHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 1 MADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEE---VQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 1 ~~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
|+..+++.++.++..+|..+|.+++|.|+.+++..++..+ |..++..+ +..++..+|.+++|.|++ +|+.++...
T Consensus 4 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~ 81 (86)
T 1j7q_A 4 KARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKL-GQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKW 81 (86)
T ss_dssp CCCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHT-SCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHH
Confidence 4556888999999999999999999999999999999999 89999999 999999999999999999 999988765
Q ss_pred cc
Q 032008 78 MK 79 (149)
Q Consensus 78 ~~ 79 (149)
..
T Consensus 82 ~~ 83 (86)
T 1j7q_A 82 VR 83 (86)
T ss_dssp HT
T ss_pred Hh
Confidence 43
No 166
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=99.59 E-value=1e-14 Score=82.04 Aligned_cols=69 Identities=62% Similarity=1.020 Sum_probs=64.3
Q ss_pred cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 80 ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 80 ~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
....+.+..+|+.+|.+++|+|+.+|+..++..+|..++.+++..++..+|.+++|.|+++||+.++..
T Consensus 25 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 25 TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp CSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 345578999999999999999999999999999999999999999999999999999999999998764
No 167
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.59 E-value=4.4e-14 Score=85.39 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=87.5
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhh---cCCCCCcccHHHHHHHHHHh---CCCCCHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVF---DRDQDGFISAAELRNVMMNL---GERLSDEE 121 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~---D~~~~g~i~~~e~~~~l~~~---~~~~~~~~ 121 (149)
..+..+|..+|.+++|.|+..+|...+.........+.+..+++.+ |.++ |.|+.+||..++... ........
T Consensus 8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~ 86 (149)
T 2mys_C 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFED 86 (149)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHH
Confidence 4578889999999999999999999988776666678899999999 9999 999999999999875 23345678
Q ss_pred HHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 122 TEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 122 ~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+..+|..+|.+++|.|+.+||..++..
T Consensus 87 ~~~~F~~~D~d~~G~i~~~el~~~l~~ 113 (149)
T 2mys_C 87 FVEGLRVFDKEGNGTVMGAELRHVLAT 113 (149)
T ss_pred HHHHHHHhCCCCCceEcHHHHHHHHHH
Confidence 999999999999999999999998764
No 168
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.59 E-value=1.3e-14 Score=88.56 Aligned_cols=100 Identities=13% Similarity=0.196 Sum_probs=88.1
Q ss_pred HHHHHHHhhccC--CCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCC--CCCHHHHH
Q 032008 48 EEVQEMISEVDF--DGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE--RLSDEETE 123 (149)
Q Consensus 48 ~~~~~~~~~~d~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~ 123 (149)
..++.+|..+|. +++|.|+..+|...+...........+..+ +.+|.+++|.|+++||..++..... ......+.
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~ 87 (156)
T 1wdc_C 9 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYM 87 (156)
T ss_dssp HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHH
T ss_pred HHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHH
Confidence 347788999999 999999999999999877666666788888 9999999999999999999987743 45678899
Q ss_pred HHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 124 QMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 124 ~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|..+|.+++|.|+.+||..++..
T Consensus 88 ~~F~~~D~d~~G~I~~~el~~~l~~ 112 (156)
T 1wdc_C 88 EAFKTFDREGQGFISGAELRHVLTA 112 (156)
T ss_dssp HHHHTTCSSSSSEEEHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999998864
No 169
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.6e-14 Score=90.19 Aligned_cols=101 Identities=26% Similarity=0.308 Sum_probs=88.8
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCC-CCHHHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGER-LSDEETEQMI 126 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~-~~~~~~~~~~ 126 (149)
.+++.+|..+|.+++|.|+.+||...+...........+..++..+|.+++|.|+..||...+...... -+.+++..+|
T Consensus 11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF 90 (176)
T 2lhi_A 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAF 90 (176)
T ss_dssp GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHH
Confidence 357888999999999999999999999888777788999999999999999999999999888654332 2456799999
Q ss_pred HhhCcCCCCceeHHHHHHHHhc
Q 032008 127 READLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+|.|++|.|+.+|+..++..
T Consensus 91 ~~fD~d~~G~I~~~el~~~l~~ 112 (176)
T 2lhi_A 91 KVFDKNGDGLISAAELKHVLTS 112 (176)
T ss_dssp HHHCSSCSSSBCHHHHHHHHHT
T ss_pred HHhCCCCCCcCcHHHHHHHHHH
Confidence 9999999999999999998864
No 170
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.59 E-value=1.4e-14 Score=91.51 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=87.1
Q ss_pred HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHH
Q 032008 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMI 126 (149)
Q Consensus 47 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~ 126 (149)
...+..+|..+|.+++|.|+.+||...+........ ..+..+|+.+|.+++|.|+.+||..++.... ....+.+..+|
T Consensus 51 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F 128 (191)
T 3k21_A 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAF 128 (191)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHH
Confidence 456788999999999999999999999977655444 7889999999999999999999999875443 36778899999
Q ss_pred HhhCcCCCCceeHHHHHHHHhc
Q 032008 127 READLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|.|++|.|+.+||..++..
T Consensus 129 ~~~D~d~~G~Is~~El~~~l~~ 150 (191)
T 3k21_A 129 RVFDVDNDGEITTAELAHILYN 150 (191)
T ss_dssp HHHSTTCSSCBCHHHHHHHHHH
T ss_pred HHhCCCCCCcCCHHHHHHHHHh
Confidence 9999999999999999998753
No 171
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.59 E-value=1.3e-14 Score=91.48 Aligned_cols=101 Identities=17% Similarity=0.257 Sum_probs=82.2
Q ss_pred HHHHHHHhhc-cCCCCCcccHHHHHHHHHhh----cccCcHHHHHHHh-----------hhhcCCCCCcccHHHHHHHHH
Q 032008 48 EEVQEMISEV-DFDGNGSIDFLEFLTIMGRK----MKENVSEELKEAF-----------KVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 48 ~~~~~~~~~~-d~~~~g~i~~~ef~~~~~~~----~~~~~~~~~~~~f-----------~~~D~~~~g~i~~~e~~~~l~ 111 (149)
..+..+|..+ |.+++|.|+.+||...+... ......+.+..++ +.+|.+++|.|+.+||..++.
T Consensus 12 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 91 (191)
T 2ccm_A 12 NKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWA 91 (191)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHH
Confidence 4578899999 99999999999999988766 2233335555555 999999999999999999887
Q ss_pred HhC------C---CCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 112 NLG------E---RLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 112 ~~~------~---~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
... . ......+..+|..+|.|++|.|+++||..++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~ 137 (191)
T 2ccm_A 92 ECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMS 137 (191)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHT
T ss_pred HHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 652 1 123467899999999999999999999998754
No 172
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.59 E-value=8.6e-15 Score=89.77 Aligned_cols=102 Identities=22% Similarity=0.351 Sum_probs=86.3
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCC---CHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHH
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHP---RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKE 88 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~---~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 88 (149)
.+..+|..+|.+++|.|+.++|..++........ ....+..+|..+|.+++|.|+.++|..++.........+.+..
T Consensus 57 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~ 136 (162)
T 1top_A 57 ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIED 136 (162)
T ss_dssp HHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHH
T ss_pred HHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHH
Confidence 4566789999999999999999998876521111 4567899999999999999999999999987655566788999
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHHh
Q 032008 89 AFKVFDRDQDGFISAAELRNVMMNL 113 (149)
Q Consensus 89 ~f~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
+|+.+|.+++|.|+.+||..++..+
T Consensus 137 ~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 137 LMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred HHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 9999999999999999999998754
No 173
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.58 E-value=3e-14 Score=82.10 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=83.0
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh---cccC
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK---MKEN 81 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~ 81 (149)
+++.++ ..+|..+| ++|.|+.++|..++.. .......++.+|..+|.+++|.|+.++|...+... ....
T Consensus 6 ~t~~e~---~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 77 (109)
T 1rwy_A 6 LSAEDI---KKAIGAFT--AADSFDHKKFFQMVGL---KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL 77 (109)
T ss_dssp SCHHHH---HHHHHTTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred CCHHHH---HHHHHHcC--CCCcEeHHHHHHHHhc---CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence 445554 45566677 7899999999998742 24567889999999999999999999999999877 3445
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
..+.+..+++.+|.+++|.|+.+||..++..
T Consensus 78 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 78 SAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 6688999999999999999999999988764
No 174
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=99.58 E-value=8.2e-15 Score=79.28 Aligned_cols=73 Identities=36% Similarity=0.590 Sum_probs=67.9
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
+++++.+++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++++|+.++....
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 73 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRAL-GFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEKI 73 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHH-TCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh-CCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHh
Confidence 467889999999999999999999999999999999 8999999999999999999999999999999886543
No 175
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.58 E-value=1.8e-14 Score=93.33 Aligned_cols=117 Identities=15% Similarity=0.219 Sum_probs=90.2
Q ss_pred CccHHHHHHHHHHhcCCCCCHH---HHHHHHhhccCC--CCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcc
Q 032008 27 LITMKDLATVIQSAQDEHPRKE---EVQEMISEVDFD--GNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFI 101 (149)
Q Consensus 27 ~i~~~e~~~~l~~~~~~~~~~~---~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i 101 (149)
.++.+++..+.... + .+.. .+..+|..+|.+ ++|.|+..||...+.. ........+..+|+.+|.+++|.|
T Consensus 27 ~l~~~~~~~l~~~~-~--ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I 102 (226)
T 2zfd_A 27 SGGLGDPELLARDT-V--FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGIL 102 (226)
T ss_dssp -----CTHHHHHHS-S--CCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSB
T ss_pred cCCHHHHHHHHHhC-C--CCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcC
Confidence 34457777766644 3 3443 466788888998 9999999999998875 222222457789999999999999
Q ss_pred cHHHHHHHHHHhCC-CCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 102 SAAELRNVMMNLGE-RLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 102 ~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+||..++...+. ....+.+..+|..+|.|++|.|+.+||..++.
T Consensus 103 ~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~ 149 (226)
T 2zfd_A 103 GFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 149 (226)
T ss_dssp CHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Confidence 99999999998763 34567799999999999999999999999874
No 176
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.58 E-value=3.1e-14 Score=82.06 Aligned_cols=99 Identities=18% Similarity=0.214 Sum_probs=81.7
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh---cccC
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK---MKEN 81 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~ 81 (149)
+++.+++ .++..+| ++|.|+.++|..++... ......++.+|..+|.+++|.|+.++|...+... ....
T Consensus 7 ~~~~e~~---~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~ 78 (109)
T 1bu3_A 7 LADADVA---AALKACE--AADSFNYKAFFAKVGLT---AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARAL 78 (109)
T ss_dssp SCHHHHH---HHHHHTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCC
T ss_pred CCHHHHH---HHHHHhC--CCCcCcHHHHHHHHHcC---hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCC
Confidence 4455544 4566666 78999999999987432 3467889999999999999999999999999877 3445
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
..+.+..+|+.+|.+++|.|+++||..++.
T Consensus 79 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 79 TDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 668899999999999999999999998764
No 177
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.57 E-value=3.2e-14 Score=81.85 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=79.6
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh---cccCcHHHHHH
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK---MKENVSEELKE 88 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~~~~~~~~ 88 (149)
.+..+|..+| ++|.|+.++|..++.. .......++.+|..+|.+++|.|+.++|...+... ......+.+..
T Consensus 10 e~~~l~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~ 84 (108)
T 2pvb_A 10 DVAAALAACS--AADSFKHKEFFAKVGL---ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKA 84 (108)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHH
T ss_pred HHHHHHHHhC--CCCcCcHHHHHHHHhC---ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHH
Confidence 4445566666 7899999999998743 24567889999999999999999999999988766 34456688999
Q ss_pred HhhhhcCCCCCcccHHHHHHHHH
Q 032008 89 AFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 89 ~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
+|+.+|.+++|.|+.+||..++.
T Consensus 85 ~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 85 FLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHhCCCCCCcEeHHHHHHHHh
Confidence 99999999999999999998775
No 178
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=99.57 E-value=2.5e-14 Score=79.70 Aligned_cols=67 Identities=45% Similarity=0.676 Sum_probs=62.6
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
....+..+|+.+|.+++|+|+.+|+..++..+|..++.+++..++..+|.+++|.|+++||+.++..
T Consensus 18 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3467899999999999999999999999999999999999999999999999999999999998753
No 179
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.57 E-value=1.8e-14 Score=86.75 Aligned_cols=101 Identities=17% Similarity=0.222 Sum_probs=86.6
Q ss_pred CCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh--CCCCCHHHH
Q 032008 45 PRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL--GERLSDEET 122 (149)
Q Consensus 45 ~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~--~~~~~~~~~ 122 (149)
++.++++.+|..+|.+++|.|+..+|...+.........+.+..+++. +++|.|+.+||..++... ........+
T Consensus 2 ls~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 78 (145)
T 2bl0_B 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEM 78 (145)
T ss_dssp CCHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHH
T ss_pred CCHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHH
Confidence 456679999999999999999999999999877666666788888887 789999999999988764 233456789
Q ss_pred HHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 123 EQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 123 ~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|..+|.+++|.|+.+||..++..
T Consensus 79 ~~~F~~~D~d~~G~i~~~e~~~~l~~ 104 (145)
T 2bl0_B 79 LDAFRALDKEGNGTIQEAELRQLLLN 104 (145)
T ss_dssp HHHHHHHCSSSSSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 99999999999999999999998864
No 180
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=99.57 E-value=8.2e-15 Score=78.03 Aligned_cols=67 Identities=52% Similarity=0.831 Sum_probs=62.8
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+|.+++|+|+.+|+..++..+|..++.+++..++..+|.+++|.|+++||+.++.+
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 3467899999999999999999999999999999999999999999999999999999999998864
No 181
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=99.56 E-value=2.5e-14 Score=81.92 Aligned_cols=84 Identities=17% Similarity=0.298 Sum_probs=71.9
Q ss_pred cccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHH
Q 032008 64 SIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFA 143 (149)
Q Consensus 64 ~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~ 143 (149)
.++++++...+...... ....+..+|+.+|.+++|+|+.+||..++..+|..++.+++..++..+|.+++|.|+|+||+
T Consensus 5 ~~~~~~~~~~l~~~~~~-~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~ 83 (105)
T 1wlz_A 5 ATADRDILARLHKAVTS-HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 83 (105)
T ss_dssp TTCCHHHHHHHHHHHHH-THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHH
T ss_pred chhHHHHHHHHHHHHHc-hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 35667776666554432 34778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhc
Q 032008 144 RMMMA 148 (149)
Q Consensus 144 ~~l~~ 148 (149)
.++..
T Consensus 84 ~~~~~ 88 (105)
T 1wlz_A 84 SRFSS 88 (105)
T ss_dssp HHHC-
T ss_pred HHHhc
Confidence 98753
No 182
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.56 E-value=3.3e-14 Score=98.30 Aligned_cols=100 Identities=31% Similarity=0.393 Sum_probs=85.9
Q ss_pred HHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHH
Q 032008 49 EVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG-ERLSDEETEQMIR 127 (149)
Q Consensus 49 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~ 127 (149)
+++++|..+|.+++|.|+.+||...+...-.....+++..+|+.+|.+++|.|+++||..++.... ..-+.+++..+|+
T Consensus 303 ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk 382 (440)
T 3u0k_A 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFR 382 (440)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 467889999999999999999999998876677778999999999999999999999998886542 2234568899999
Q ss_pred hhCcCCCCceeHHHHHHHHhc
Q 032008 128 EADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 128 ~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|.|++|.|+.+||.+++..
T Consensus 383 ~fDkDgdG~IS~eELr~vL~~ 403 (440)
T 3u0k_A 383 VFDKDGNGYISAAELRHVMTN 403 (440)
T ss_dssp HHCTTCSSEECHHHHHHHHHH
T ss_pred HHCCCCcCcCCHHHHHHHHHH
Confidence 999999999999999998764
No 183
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.56 E-value=5.8e-14 Score=81.00 Aligned_cols=96 Identities=19% Similarity=0.308 Sum_probs=80.0
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh---cccCcHHHHHH
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK---MKENVSEELKE 88 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~~~~~~~~~ 88 (149)
++..++..+| ++|.|+.++|..++. ........+..+|..+|.+++|.|+.++|...+... ......+.+..
T Consensus 11 e~~~~~~~~d--~~g~i~~~ef~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~ 85 (110)
T 1pva_A 11 DIKKALDAVK--AEGSFNHKKFFALVG---LKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKA 85 (110)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHHT---CTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHH
T ss_pred HHHHHHHhcC--CCCcCcHHHHHHHHc---cCcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 3445566666 789999999999873 234567889999999999999999999999988766 33456688999
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHH
Q 032008 89 AFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 89 ~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
+|+.+|.+++|.|+.+||..++..
T Consensus 86 ~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 86 FLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHh
Confidence 999999999999999999988763
No 184
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.56 E-value=3.9e-14 Score=88.65 Aligned_cols=98 Identities=16% Similarity=0.255 Sum_probs=83.8
Q ss_pred HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHH
Q 032008 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMI 126 (149)
Q Consensus 47 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~ 126 (149)
...+..+|..+|.+++|.|+..||...+..... .+..+..+|+.+|.+++|.|+.+||...+.... ....+.+..+|
T Consensus 38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~--~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~-~~~~~~~~~~F 114 (180)
T 3mse_B 38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGI--KKWDINRILQALDINDRGNITYTEFMAGCYRWK-NIESTFLKAAF 114 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCT-TC--CHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC--CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcc-cCCHHHHHHHH
Confidence 356889999999999999999999999876533 357899999999999999999999998887643 23457899999
Q ss_pred HhhCcCCCCceeHHHHHHHHh
Q 032008 127 READLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..+|.+++|.|+.+||..++.
T Consensus 115 ~~~D~d~~G~I~~~El~~~l~ 135 (180)
T 3mse_B 115 NKIDKDEDGYISKSDIVSLVH 135 (180)
T ss_dssp HHHCTTCSSCBCHHHHHHHTT
T ss_pred HHHCCCCCCCCCHHHHHHHHc
Confidence 999999999999999998874
No 185
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=99.56 E-value=1.4e-14 Score=78.40 Aligned_cols=65 Identities=34% Similarity=0.631 Sum_probs=61.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+|.+++|+|+.+|+..++..+|..++.+++..++..+|.+++|.|+++||+.++..
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999998753
No 186
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=99.56 E-value=2e-14 Score=79.38 Aligned_cols=65 Identities=38% Similarity=0.684 Sum_probs=60.3
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+.+..+|+.+|.+++|+|+.+|+..++..+| .++.+++..++..+|.+++|.|+++||+.++..
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 74 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 46789999999999999999999999999999 899999999999999999999999999998754
No 187
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=99.55 E-value=1.9e-14 Score=81.65 Aligned_cols=65 Identities=18% Similarity=0.308 Sum_probs=58.8
Q ss_pred HHHHHHhhhhc-CCCC-CcccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQD-GFISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~-g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.|| .+++ |+|+.+||+.++.. +|...+++++..+++.+|.|++|.|+|+||+.++..
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 67899999997 8887 99999999999986 356788999999999999999999999999998754
No 188
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=99.55 E-value=3.2e-14 Score=78.37 Aligned_cols=65 Identities=34% Similarity=0.610 Sum_probs=61.7
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+..+|+.+|.+++|+|+.+|+..++..+|..++.+++..++..+|.+++|.|+++||+.++..
T Consensus 14 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 78 (85)
T 2ktg_A 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLE 78 (85)
T ss_dssp HHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999998764
No 189
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.55 E-value=2.3e-14 Score=106.76 Aligned_cols=123 Identities=13% Similarity=0.289 Sum_probs=101.7
Q ss_pred hhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhc-------cCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 19 MIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEV-------DFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 19 ~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~-------d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.+|.|++|.|+.+++..++... + ....++..++..+ |.+++|.|+|+||..++...... +++..+|+
T Consensus 163 ~fd~n~dG~Is~kEl~~~l~~~-~--~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~R---~EI~eiF~ 236 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCLSKD-K--DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLER---SEIEGIFK 236 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHHCSC-H--HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCCC---THHHHHHH
T ss_pred hccCCCCCCCCHHHHHHHHHhc-C--ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCCH---HHHHHHHH
Confidence 3689999999999999987543 1 1134577777776 56678999999999999876543 58999999
Q ss_pred hhcCCCCCcccHHHHHHHHHHhC-CC---------CCHHHHHHHHHhhCc--C----CCCceeHHHHHHHHhc
Q 032008 92 VFDRDQDGFISAAELRNVMMNLG-ER---------LSDEETEQMIREADL--D----GDGLVSFEEFARMMMA 148 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~~~~-~~---------~~~~~~~~~~~~~d~--~----~~g~i~~~ef~~~l~~ 148 (149)
.++.+++|.|+. ||..+|...+ .. .+.+.+..+++.++. + ++|.|++++|.++|.+
T Consensus 237 ~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S 308 (816)
T 3qr0_A 237 ELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMC 308 (816)
T ss_dssp HHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHS
T ss_pred HHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhc
Confidence 999999999999 9999999986 32 578899999999876 4 6889999999999864
No 190
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.55 E-value=4.3e-14 Score=89.88 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=85.0
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhcC----------------CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHh
Q 032008 13 FQEAFCMIDKDSDGLITMKDLATVIQSAQD----------------EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGR 76 (149)
Q Consensus 13 l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~----------------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 76 (149)
+..+|..+|.+++|.|+.++|..++..... .......+..+|..+|.+++|.|+.+||..++..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 677899999999999999999999877632 3445677999999999999999999999999987
Q ss_pred h-cccCcHHHHHHHhhh----hcCCCCCcccHHHHHHHHHHh
Q 032008 77 K-MKENVSEELKEAFKV----FDRDQDGFISAAELRNVMMNL 113 (149)
Q Consensus 77 ~-~~~~~~~~~~~~f~~----~D~~~~g~i~~~e~~~~l~~~ 113 (149)
. ......+.+..+++. +|.+++|.|+++||..++...
T Consensus 143 ~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 184 (202)
T 2bec_A 143 MVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184 (202)
T ss_dssp SCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTS
T ss_pred hcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHh
Confidence 6 334455666666666 999999999999999988754
No 191
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=99.54 E-value=6.6e-14 Score=78.28 Aligned_cols=65 Identities=75% Similarity=1.199 Sum_probs=59.4
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+|.+++|+|+.+|+..++..+|..++.+++..++..+|.+++|.|+++||+.++..
T Consensus 9 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~ 73 (92)
T 2kn2_A 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMT 73 (92)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 67889999999999999999999999999998899999999999999999999999999987753
No 192
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.54 E-value=4e-14 Score=81.46 Aligned_cols=100 Identities=19% Similarity=0.224 Sum_probs=81.7
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc---cc
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM---KE 80 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~---~~ 80 (149)
.+++.+++++ |..+| ++|.|+.++|..++.. .......++.+|..+|.+++|.|+.++|...+.... ..
T Consensus 5 ~~t~~e~~~~---~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 1rro_A 5 ILSAEDIAAA---LQECQ--DPDTFEPQKFFQTSGL---SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE 76 (108)
T ss_dssp TSCHHHHHHH---HHHTC--STTCCCHHHHHHHHSG---GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCC
T ss_pred cCCHHHHHHH---HHHcc--CCCCcCHHHHHHHHhc---CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCC
Confidence 4566665554 55556 7899999999998742 245678899999999999999999999999887662 34
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
...+.+..+|+.+|.+++|.|+.+||..++.
T Consensus 77 ~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 77 LTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 5568899999999999999999999998764
No 193
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.54 E-value=8e-14 Score=89.03 Aligned_cols=101 Identities=17% Similarity=0.155 Sum_probs=84.1
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcc--cCcHHHHHHHh-------hhhcCCCCCcccHHHHHHHHH-------
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK--ENVSEELKEAF-------KVFDRDQDGFISAAELRNVMM------- 111 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--~~~~~~~~~~f-------~~~D~~~~g~i~~~e~~~~l~------- 111 (149)
..+..+|..+|.+++|.|+..||...+..... ....+.+..++ +.+|.+++|.|+.+||..++.
T Consensus 36 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~ 115 (208)
T 2hpk_A 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAER 115 (208)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhhhh
Confidence 35789999999999999999999999876654 55567788888 999999999999999999886
Q ss_pred --HhCC-CCCHHH-HHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 112 --NLGE-RLSDEE-TEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 112 --~~~~-~~~~~~-~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.... .-..++ +..+|..+|.|++|.|+.+||..++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~ 156 (208)
T 2hpk_A 116 ERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKA 156 (208)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred hhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 3322 222334 788999999999999999999998754
No 194
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=99.54 E-value=3.5e-14 Score=76.98 Aligned_cols=64 Identities=39% Similarity=0.702 Sum_probs=59.1
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+|.+++|+|+.+|+..++..+| .++++++..++..+|.+++|.|+++||+.++..
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNA 66 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 4678899999999999999999999999999 899999999999999999999999999998764
No 195
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.53 E-value=1.1e-14 Score=88.36 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=85.1
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCC--CCCcccHHHHHHHHHHhCCC---CCHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRD--QDGFISAAELRNVMMNLGER---LSDEET 122 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~--~~g~i~~~e~~~~l~~~~~~---~~~~~~ 122 (149)
..++.+|..+|.+++|.|+..+|...+...........+..+|+.+|.+ ++|.|+.+||..++...... .....+
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l 89 (151)
T 1w7j_B 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDY 89 (151)
T ss_dssp -CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHH
Confidence 3578899999999999999999999998776666678899999999999 99999999999999876421 234567
Q ss_pred HHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 123 EQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 123 ~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|..+|.+++|.|+.+||..++..
T Consensus 90 ~~~F~~~D~d~~G~I~~~el~~~l~~ 115 (151)
T 1w7j_B 90 LEGFRVFDKEGNGKVMGAELRHVLTT 115 (151)
T ss_dssp HHHHHTTCTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 88999999999999999999998864
No 196
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.53 E-value=3.9e-14 Score=101.54 Aligned_cols=100 Identities=26% Similarity=0.404 Sum_probs=87.1
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcc--------cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK--------ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--------~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~ 119 (149)
.+++.+|..+|.+++|.|+.+||...+..... ....+.+..+|+.+|.+++|.|+.+||..++.........
T Consensus 355 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~ 434 (504)
T 3q5i_A 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSE 434 (504)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCH
T ss_pred HHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCH
Confidence 45789999999999999999999988876532 3445889999999999999999999999988765555678
Q ss_pred HHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 120 EETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 120 ~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+..+|..+|.|++|.|+.+||..++.
T Consensus 435 ~~~~~~F~~~D~d~dG~Is~~El~~~l~ 462 (504)
T 3q5i_A 435 ERLRRAFNLFDTDKSGKITKEELANLFG 462 (504)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 8999999999999999999999998865
No 197
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=99.53 E-value=8.4e-14 Score=77.79 Aligned_cols=72 Identities=17% Similarity=0.325 Sum_probs=65.6
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHh
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGR 76 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 76 (149)
...+++++.+++..+|..+|.+++|.|+.++|..++..+ + .+..++..++..+|.+++|.|+++||+..+..
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCTEL-R--VRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHT-T--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc-C--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 356889999999999999999999999999999999988 6 68889999999999999999999999988764
No 198
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=99.53 E-value=7.2e-14 Score=78.98 Aligned_cols=65 Identities=22% Similarity=0.478 Sum_probs=58.3
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQDG-FISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.|| .+++| +|+.+||+.++.. ++...+++++..+++.+|.|++|.|+|+||+.++..
T Consensus 11 ~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 82 (98)
T 3n22_A 11 AVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82 (98)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 67899999998 78885 9999999999986 456789999999999999999999999999998753
No 199
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.52 E-value=7.9e-14 Score=99.44 Aligned_cols=102 Identities=24% Similarity=0.366 Sum_probs=89.4
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHH
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEA 89 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 89 (149)
...+..+|..+|.+++|.|+.+||..++... ....+.+.+..+|..+|.+++|.|+.+||..++.. .....+++..+
T Consensus 381 ~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~-~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~ 457 (484)
T 3nyv_A 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDR-KTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSV 457 (484)
T ss_dssp HHHHHHHHHHHTCCTTSEEEHHHHHHHHHHH-HHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHhc-cccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHH
Confidence 3567788999999999999999999988776 55556778999999999999999999999999875 34456889999
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHhC
Q 032008 90 FKVFDRDQDGFISAAELRNVMMNLG 114 (149)
Q Consensus 90 f~~~D~~~~g~i~~~e~~~~l~~~~ 114 (149)
|+.+|.|++|.|+.+||..++..+.
T Consensus 458 ~~~~D~d~dG~i~~~Ef~~~~~~~~ 482 (484)
T 3nyv_A 458 LSEVDKNNDGEVDFDEFQQMLLKLC 482 (484)
T ss_dssp HHHHCTTCCSEEEHHHHHHHHHHTT
T ss_pred HHHhcCCCCCcCCHHHHHHHHHhhh
Confidence 9999999999999999999998753
No 200
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=99.52 E-value=1.2e-14 Score=88.48 Aligned_cols=92 Identities=23% Similarity=0.361 Sum_probs=63.7
Q ss_pred CHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q 032008 46 RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQM 125 (149)
Q Consensus 46 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~ 125 (149)
+..++..++..++.+++ +.+|..+ ....+.+..+|+.+|.+++|+|+.+|+..++..+|..++++++..+
T Consensus 22 ~~~~~~~i~~~~d~~~~----~~~~~~l------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l 91 (150)
T 2jjz_A 22 QERRLAEINREFLCDQK----YSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKM 91 (150)
T ss_dssp HHHHHHHHHHHHHTCGG----GSSCTTH------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHhccCCC----chhhHhH------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHH
Confidence 45566667766665432 2222211 1222567778888888888888888888888887777788888888
Q ss_pred HHhhCcCCCCceeHHHHHHHHh
Q 032008 126 IREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 126 ~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+..+|.+++|.|+++||+.++.
T Consensus 92 ~~~~D~d~dg~I~~~eF~~~~~ 113 (150)
T 2jjz_A 92 ISEVTGGVSDTISYRDFVNMML 113 (150)
T ss_dssp HHHHHTTSCSSBCHHHHHHHHH
T ss_pred HHHHCCCCCCcEeHHHHHHHHH
Confidence 8888888888888888877765
No 201
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.52 E-value=8.8e-14 Score=83.39 Aligned_cols=97 Identities=14% Similarity=0.127 Sum_probs=82.1
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCC---CHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERL---SDEETEQ 124 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~---~~~~~~~ 124 (149)
.+++.+|..+|.+++|.|+..+|...+.........+.+..++. +++|.|+.+||..++....... ....+..
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~ 80 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK 80 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHHH
Confidence 45788999999999999999999999987766666677777776 8899999999999988764322 3478999
Q ss_pred HHHhhCcCCCCceeHHHHHHHHhc
Q 032008 125 MIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 125 ~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+|..+|.+++|.|+.+||..++..
T Consensus 81 ~F~~~D~d~~G~i~~~el~~~l~~ 104 (140)
T 1ggw_A 81 GFQVFDKDATGMIGVGELRYVLTS 104 (140)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHH
T ss_pred HHHHhCCCCCCcEeHHHHHHHHHH
Confidence 999999999999999999998753
No 202
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=99.51 E-value=7.5e-15 Score=77.09 Aligned_cols=62 Identities=23% Similarity=0.382 Sum_probs=57.3
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 87 KEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 87 ~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|+.+|.+++|+|+.+|+..++..+|..++.+++..++..+|.+++|.|+++||+.++.+
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 56899999999999999999999999888888899999999999999999999999998864
No 203
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.51 E-value=1.9e-14 Score=101.02 Aligned_cols=125 Identities=29% Similarity=0.351 Sum_probs=97.4
Q ss_pred hcCCCCCCccHHHHHHHHHHhcCCCCC---HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCC
Q 032008 20 IDKDSDGLITMKDLATVIQSAQDEHPR---KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRD 96 (149)
Q Consensus 20 ~d~~~~g~i~~~e~~~~l~~~~~~~~~---~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~ 96 (149)
.|.+.+|.+...++.... ...++ ..+++.+|..+|.+++|.|+.+||..++.........+.+..+|+.+|.+
T Consensus 285 iD~de~g~i~~~e~~~~~----~~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~D 360 (450)
T 3sg6_A 285 IDFKEDGNILGHKLEYNT----RDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 360 (450)
T ss_dssp ESCCTTSTTTTTCBCCC-------CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTT
T ss_pred CCccccccchhhhhhhhh----cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccC
Confidence 455666666555443211 11222 24688899999999999999999999998876667778999999999999
Q ss_pred CCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 97 QDGFISAAELRNVMMNLG-ERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 97 ~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
++|.|+.+||..++.... .....+.+..+|..+|.|++|.|+.+||..++..
T Consensus 361 gdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~ 413 (450)
T 3sg6_A 361 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 413 (450)
T ss_dssp SSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 999999999999988642 3346778999999999999999999999998753
No 204
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.51 E-value=1.9e-13 Score=85.58 Aligned_cols=98 Identities=15% Similarity=0.257 Sum_probs=81.5
Q ss_pred HHHhhhcCCCCCC-ccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc-----cCcHHHHH-
Q 032008 15 EAFCMIDKDSDGL-ITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK-----ENVSEELK- 87 (149)
Q Consensus 15 ~~f~~~d~~~~g~-i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-----~~~~~~~~- 87 (149)
.+|..+|.+++|. |+..+|..++............+..+|..+|.+++|.|+.++|..++..... ....+.+.
T Consensus 64 ~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~ 143 (183)
T 1dgu_A 64 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 143 (183)
T ss_dssp HHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred HHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHH
Confidence 5788889999999 9999999999877333344568999999999999999999999999876644 23334555
Q ss_pred ---HHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 88 ---EAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 88 ---~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
.+|+.+|.+++|.|+.+||..++..
T Consensus 144 ~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 171 (183)
T 1dgu_A 144 LIDNILEESDIDRDGTINLSEFQHVISR 171 (183)
T ss_dssp HHHHHHHHHCTTSSSEEEHHHHHHHHCS
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 4999999999999999999988764
No 205
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.51 E-value=1.6e-13 Score=86.54 Aligned_cols=102 Identities=14% Similarity=0.155 Sum_probs=79.8
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCC------CCCHHHHH----HHHhhccCCCCCcccHHHHHHHHHhhcccC
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDE------HPRKEEVQ----EMISEVDFDGNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~------~~~~~~~~----~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 81 (149)
.+..+|..+|.+++|.|+.++|..++...... ....+.++ .+|..+|.+++|.|+.+||..++.......
T Consensus 67 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~ 146 (195)
T 1qv0_A 67 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISP 146 (195)
T ss_dssp HHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCC
Confidence 47788999999999999999999987655210 11111233 899999999999999999999998775555
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNL 113 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
..+.+..+|+.+|.+++|.|+.+||...+..+
T Consensus 147 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 178 (195)
T 1qv0_A 147 SQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF 178 (195)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 67889999999999999999999999888764
No 206
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=99.51 E-value=1e-13 Score=77.47 Aligned_cols=64 Identities=27% Similarity=0.518 Sum_probs=60.0
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhcC
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMAF 149 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~ 149 (149)
+.+..+|+.+|.+++|+|+.+|+..++..+| ++..++..++..+|.+++|.|+++||+.++..+
T Consensus 27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~~ 90 (91)
T 2pmy_A 27 ARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFLGS 90 (91)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 6689999999999999999999999999988 789999999999999999999999999998764
No 207
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.50 E-value=1.5e-13 Score=86.35 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=83.7
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCC------CCCHHHH----HHHHhhccCCCCCcccHHHHHHHHHhhcccC
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDE------HPRKEEV----QEMISEVDFDGNGSIDFLEFLTIMGRKMKEN 81 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~------~~~~~~~----~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~ 81 (149)
.+..+|..+|.+++|.|+.+||..++...... ....+.+ +.+|..+|.+++|.|+.+||..++.......
T Consensus 63 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~ 142 (191)
T 1uhk_A 63 AVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQ 142 (191)
T ss_dssp HHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCC
Confidence 57788999999999999999999987654110 1111223 3899999999999999999999997765555
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNL 113 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
..+.+..+|+.+|.+++|.|+.+||...+..+
T Consensus 143 ~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~ 174 (191)
T 1uhk_A 143 SSEDCEETFRVCDIDESGQLDVDEMTRQHLGF 174 (191)
T ss_dssp SHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 66889999999999999999999999988754
No 208
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.50 E-value=3.6e-14 Score=101.45 Aligned_cols=100 Identities=24% Similarity=0.438 Sum_probs=86.3
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcc--------cCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK--------ENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSD 119 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--------~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~ 119 (149)
.+++.+|..+|.+++|.|+.+||...+..... ....+.+..+|+.+|.+++|.|+.+||..++...+...+.
T Consensus 346 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~ 425 (494)
T 3lij_A 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSK 425 (494)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCH
T ss_pred HHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccH
Confidence 45788999999999999999999988876643 2234789999999999999999999999998765555678
Q ss_pred HHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 120 EETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 120 ~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+++..+|..+|.|++|.|+.+||..++.
T Consensus 426 ~~~~~~F~~~D~d~~G~Is~~El~~~l~ 453 (494)
T 3lij_A 426 DKLESAFQKFDQDGNGKISVDELASVFG 453 (494)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHC-
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 8999999999999999999999998764
No 209
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=99.50 E-value=3.4e-14 Score=77.58 Aligned_cols=66 Identities=41% Similarity=0.715 Sum_probs=61.4
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLG-ERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+.+. +|+.+|.+++|+|+.+|+..++..+| ..++.+++..++..+|.+++|.|+++||+.++..
T Consensus 7 ~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 73 (81)
T 1c7v_A 7 EEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 73 (81)
T ss_dssp CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred HHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 346788 99999999999999999999999999 9999999999999999999999999999998764
No 210
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=99.50 E-value=9.9e-14 Score=80.22 Aligned_cols=65 Identities=18% Similarity=0.475 Sum_probs=58.6
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQDG-FISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.|| .+++| +|+.+||..++.. +|..++++++..++..+|.|++|.|+|+||+.++..
T Consensus 22 ~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 22 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 67899999999 89997 9999999999986 666788899999999999999999999999988753
No 211
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.50 E-value=2.1e-13 Score=87.66 Aligned_cols=99 Identities=14% Similarity=0.251 Sum_probs=81.6
Q ss_pred HHHHhhhcCCCCCC-ccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc-----cCcHHH--
Q 032008 14 QEAFCMIDKDSDGL-ITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK-----ENVSEE-- 85 (149)
Q Consensus 14 ~~~f~~~d~~~~g~-i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-----~~~~~~-- 85 (149)
..+|..+|.+++|. |+.+||..++..........+.+..+|..+|.+++|.|+.+||..++..... ....++
T Consensus 94 ~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~ 173 (214)
T 2l4h_A 94 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMK 173 (214)
T ss_dssp HHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHH
T ss_pred HHHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHH
Confidence 35788899999999 9999999999877333344668999999999999999999999998876543 223233
Q ss_pred --HHHHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 86 --LKEAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 86 --~~~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
+..+|+.+|.+++|.|+++||..++..
T Consensus 174 ~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 202 (214)
T 2l4h_A 174 QLIDNILEESDIDRDGTINLSEFQHVISR 202 (214)
T ss_dssp HHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 345999999999999999999998874
No 212
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.50 E-value=1.5e-13 Score=76.96 Aligned_cols=62 Identities=23% Similarity=0.402 Sum_probs=57.8
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+..+|+.+|.+++|+|+.+|+..++...| ++.+++..++..+|.|++|.|+++||+.++.
T Consensus 9 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 70 (92)
T 1fi6_A 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH 70 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 6788999999999999999999999999887 6889999999999999999999999998875
No 213
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.50 E-value=2.5e-13 Score=83.12 Aligned_cols=100 Identities=15% Similarity=0.190 Sum_probs=86.7
Q ss_pred HHHHHHHhhcc--CCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh---CCCCCHHHH
Q 032008 48 EEVQEMISEVD--FDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL---GERLSDEET 122 (149)
Q Consensus 48 ~~~~~~~~~~d--~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~---~~~~~~~~~ 122 (149)
..++.+|..+| .+++|.|+..+|...+...........+..+++.+|.+ +|.|+++||..++... ......+.+
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~d~~-~g~i~~~eF~~~~~~~~~~~~~~~~~~l 87 (159)
T 2ovk_C 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMG-EKAYKLEEILPIYEEMSSKDTGTAADEF 87 (159)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTT-SCEEEHHHHHHHHHHHTTCSTTCCHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-CCeEcHHHHHHHHHHHhhccCCCcHHHH
Confidence 35788899999 99999999999999998776667778999999999974 6999999999998643 233467889
Q ss_pred HHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 123 EQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 123 ~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|..+|.+++|.|+.+||..++..
T Consensus 88 ~~~F~~~D~d~~G~I~~~El~~~l~~ 113 (159)
T 2ovk_C 88 MEAFKTFDREGQGLISSAEIRNVLKM 113 (159)
T ss_dssp HHHHHHTCTTSSSEECHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 99999999999999999999998864
No 214
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=99.50 E-value=3.3e-13 Score=76.27 Aligned_cols=73 Identities=14% Similarity=0.318 Sum_probs=63.4
Q ss_pred hhHHHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-h---cCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 5 LTEDQIAEFQEAFCMID-KDSDG-LITMKDLATVIQS-A---QDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d-~~~~g-~i~~~e~~~~l~~-~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
-.+..+..+..+|+.+| ++++| +|+.+||+.++.. + .+..++..++..++..+|.+++|.|+|+||+.++...
T Consensus 5 ~le~~i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 83 (98)
T 3n22_A 5 SLEQALAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALI 83 (98)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 45667889999999998 78885 9999999999986 2 1567889999999999999999999999999988654
No 215
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.49 E-value=1.7e-13 Score=76.69 Aligned_cols=70 Identities=20% Similarity=0.294 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+++++..+++++|..+|.+++|.|+.+++..++... + ++..++..++..+|.+++|.|+++||+..+...
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS-K--LPILELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHH-S--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-C--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 577899999999999999999999999999999987 5 568899999999999999999999999887543
No 216
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=99.49 E-value=1.8e-13 Score=76.58 Aligned_cols=64 Identities=25% Similarity=0.498 Sum_probs=58.9
Q ss_pred HHHHHHhhhhcCCCCC---cccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDG---FISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g---~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+| +++| +|+.+|+..++.. +|..++++++..++..+|.|++|.|+|+||+.++..
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 57899999999 7666 9999999999999 888899999999999999999999999999998764
No 217
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=99.49 E-value=1.6e-13 Score=75.73 Aligned_cols=65 Identities=17% Similarity=0.336 Sum_probs=60.9
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHH---HHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEE---TEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
...+..+|+.+|.+++|+|+.+|+..++..+|..++..+ +..++..+|.+++|.|++ ||+.++..
T Consensus 13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 367899999999999999999999999999999999999 999999999999999999 99988754
No 218
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=99.49 E-value=1.9e-13 Score=78.58 Aligned_cols=65 Identities=28% Similarity=0.460 Sum_probs=61.7
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+|.+++|+|+.+|+..++..+|..++..++..++..+|.+++|.|+++||+.++..
T Consensus 32 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~ 96 (107)
T 2d58_A 32 EGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 96 (107)
T ss_dssp HHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSS
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999998754
No 219
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.49 E-value=1.8e-12 Score=79.06 Aligned_cols=97 Identities=15% Similarity=0.193 Sum_probs=82.0
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLSDEETEQMI 126 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~ 126 (149)
..+..+|..+|.+++|.|+..+|...+...........+..+++ +++|.|+.+||..++... ........+..+|
T Consensus 18 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 93 (156)
T 1wdc_B 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAF 93 (156)
T ss_dssp HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 35788999999999999999999999987765566667777775 478999999999998865 3345678899999
Q ss_pred HhhCcCCCCceeHHHHHHHHhc
Q 032008 127 READLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|.+++|.|+.+||..++..
T Consensus 94 ~~~D~d~~G~I~~~el~~~l~~ 115 (156)
T 1wdc_B 94 AMFDEQETKKLNIEYIKDLLEN 115 (156)
T ss_dssp HTTCTTCCSCEEHHHHHHHHHH
T ss_pred HHHCcCCCCccCHHHHHHHHHH
Confidence 9999999999999999998864
No 220
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=99.48 E-value=2.4e-13 Score=77.54 Aligned_cols=65 Identities=17% Similarity=0.415 Sum_probs=56.8
Q ss_pred HHHHHHhhhhc-CCCC-CcccHHHHHHHHHH-hC----CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQD-GFISAAELRNVMMN-LG----ERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~-g~i~~~e~~~~l~~-~~----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.|| .+++ |+|+.+||+.++.. +| ...+++++..+++.+|.|++|.|+|+||+.++..
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 67889999997 6775 79999999999986 44 4568999999999999999999999999998753
No 221
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.48 E-value=3.2e-13 Score=83.66 Aligned_cols=99 Identities=16% Similarity=0.279 Sum_probs=81.1
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhc----ccCcHHH-H--------HHHhhhhcCCCCCcccHHHHHHHHHHhC
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKM----KENVSEE-L--------KEAFKVFDRDQDGFISAAELRNVMMNLG 114 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~----~~~~~~~-~--------~~~f~~~D~~~~g~i~~~e~~~~l~~~~ 114 (149)
..++.+|..+|.+++|.|+.+||...+.... ....... + ..+|+.+| ++|.|+.+||..++....
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~~ 83 (174)
T 1q80_A 6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEMV 83 (174)
T ss_dssp HHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHHc
Confidence 4678899999999999999999999987765 3443334 3 46789999 899999999999988764
Q ss_pred CC-----CCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 115 ER-----LSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 115 ~~-----~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.. .....+..+|..+|.+++|.|+.+||..++..
T Consensus 84 ~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~ 122 (174)
T 1q80_A 84 KNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM 122 (174)
T ss_dssp TSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Confidence 31 12467899999999999999999999998753
No 222
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.48 E-value=8.5e-14 Score=78.91 Aligned_cols=62 Identities=21% Similarity=0.302 Sum_probs=58.2
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.++.+|+.+|.+++|+|+.+|+..++...| ++.+++..+|..+|.|++|.|+++||+.++.
T Consensus 11 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~ 72 (99)
T 1qjt_A 11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALR 72 (99)
T ss_dssp THHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 6789999999999999999999999999876 6899999999999999999999999999875
No 223
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=99.48 E-value=2.4e-13 Score=76.16 Aligned_cols=65 Identities=17% Similarity=0.412 Sum_probs=55.9
Q ss_pred HHHHHHhhhhc-CCCC-CcccHHHHHHHHHH-hC----CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQD-GFISAAELRNVMMN-LG----ERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~-g~i~~~e~~~~l~~-~~----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+| .+++ |+|+.+|++.++.. +| ...+++++..+++.+|.|++|.|+|+||+.++..
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 67899999998 5774 89999999999986 54 3458899999999999999999999999998754
No 224
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=99.48 E-value=2.5e-13 Score=77.03 Aligned_cols=72 Identities=17% Similarity=0.259 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHHhhhc-CCCC-CCccHHHHHHHHHH-h---cCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 6 TEDQIAEFQEAFCMID-KDSD-GLITMKDLATVIQS-A---QDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d-~~~~-g~i~~~e~~~~l~~-~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+..+..+..+|+.+| ++++ |.|+.+||..++.. + .+..++..++..++..+|.+++|.|+|+||+.++...
T Consensus 5 le~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 5 LEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3556789999999998 8887 99999999999986 3 1567889999999999999999999999999988654
No 225
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=99.48 E-value=3.1e-13 Score=76.55 Aligned_cols=65 Identities=23% Similarity=0.388 Sum_probs=58.6
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQDG-FISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+| .+++| +|+.+||..++.. +|..+++.++..++..+|.|++|.|+|+||+.++..
T Consensus 10 ~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 10 DALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 57889999997 88887 9999999999987 567789999999999999999999999999988753
No 226
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=99.48 E-value=7.4e-14 Score=75.23 Aligned_cols=66 Identities=48% Similarity=0.697 Sum_probs=61.1
Q ss_pred HHHHHHHhhhh-cCCCC-CcccHHHHHHHHHHhCCCC--CHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVF-DRDQD-GFISAAELRNVMMNLGERL--SDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~-D~~~~-g~i~~~e~~~~l~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+.+..+|+.+ |.+++ |+|+.+|+..++..+|..+ +.+++..++..+|.+++|.|+++||+.++..
T Consensus 4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 36788999999 99999 9999999999999999888 8899999999999999999999999998764
No 227
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.48 E-value=1.3e-13 Score=77.63 Aligned_cols=63 Identities=27% Similarity=0.432 Sum_probs=58.3
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.+.+..+|+.+|.+++|+|+.+|+..++...| ++.+++..++..+|.|++|.|+++||+.++.
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~ 71 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 36789999999999999999999999999876 7899999999999999999999999998875
No 228
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=99.47 E-value=3.5e-14 Score=85.84 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=49.5
Q ss_pred HHHHHhhhcCCCCCCccHHHHHHHHHHhcC----CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc--------c
Q 032008 13 FQEAFCMIDKDSDGLITMKDLATVIQSAQD----EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK--------E 80 (149)
Q Consensus 13 l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--------~ 80 (149)
-...|..+|.+++|.|+.+||..++..... .....+.+..+|..+|.+++|.|+++||...+..... .
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 346899999999999999999998875522 1133567899999999999999999999988765421 2
Q ss_pred CcHHHH----HHHhhhhcCCCCCcccHHHHHHHH
Q 032008 81 NVSEEL----KEAFKVFDRDQDGFISAAELRNVM 110 (149)
Q Consensus 81 ~~~~~~----~~~f~~~D~~~~g~i~~~e~~~~l 110 (149)
...+++ ..+|+.+|.+++|.|+.+||..++
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 233333 666799999999999999998765
No 229
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.47 E-value=4.2e-13 Score=80.63 Aligned_cols=97 Identities=13% Similarity=0.195 Sum_probs=82.7
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLSDEETEQMI 126 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~ 126 (149)
..+..+|..+|.+++|.|+..+|...+...........+..++.. ++|.|+.+||..++... ......+.+..+|
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 82 (143)
T 3j04_B 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPEDVIRNAF 82 (143)
T ss_dssp HHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 457888999999999999999999999877666666677777665 88999999999999865 3345678899999
Q ss_pred HhhCcCCCCceeHHHHHHHHhc
Q 032008 127 READLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|.+++|.|+.+||..++..
T Consensus 83 ~~~D~d~~G~I~~~El~~~l~~ 104 (143)
T 3j04_B 83 ACFDEEASGFIHEDHLRELLTT 104 (143)
T ss_dssp TTSCSSSCCCCCTTTHHHHHHT
T ss_pred HHHCCCCCCeEcHHHHHHHHHH
Confidence 9999999999999999998864
No 230
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=99.47 E-value=1.9e-13 Score=71.79 Aligned_cols=64 Identities=23% Similarity=0.458 Sum_probs=58.8
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHh
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGR 76 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 76 (149)
++..+|..+|.+++|.|+.++|..++..+ +..++.+++..++..+|.+++|.|++++|+.++..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAF-SPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHT-CTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46789999999999999999999999998 88999999999999999999999999999988754
No 231
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.46 E-value=4.6e-13 Score=82.28 Aligned_cols=99 Identities=15% Similarity=0.225 Sum_probs=82.2
Q ss_pred HHHHHHhhccC--CCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCC---CCCHHHHH
Q 032008 49 EVQEMISEVDF--DGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE---RLSDEETE 123 (149)
Q Consensus 49 ~~~~~~~~~d~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~---~~~~~~~~ 123 (149)
+++.+|..+|. +++|.|+..++...+...-..++.+++..++. .|.+++|.|+.++|..++..... ....+++.
T Consensus 10 elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~ 88 (159)
T 3i5g_C 10 EVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFM 88 (159)
T ss_dssp HHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHH
T ss_pred HHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccccchHHHHH
Confidence 45677888885 88999999999999987766666677777655 47788999999999999876542 34678899
Q ss_pred HHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 124 QMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 124 ~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|+.+|.+++|.|+.+|+.+++..
T Consensus 89 ~aF~~fD~d~~G~I~~~el~~~l~~ 113 (159)
T 3i5g_C 89 EAFKTFDREGQGLISSAEIRNVLKM 113 (159)
T ss_dssp HHHHHHCTTSSSEECHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcCcHHHHHHHHHH
Confidence 9999999999999999999998864
No 232
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=99.46 E-value=9.1e-14 Score=76.19 Aligned_cols=65 Identities=37% Similarity=0.614 Sum_probs=59.9
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC--CCCCHHHHHH----HHHhhCcCCCCceeHHHHHHHHh
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLG--ERLSDEETEQ----MIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~--~~~~~~~~~~----~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.+.+..+|+.+|.+++|+|+.+|+..++..+| ..++++++.. ++..+|.+++|.|+++||+..+.
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~ 76 (83)
T 1yx7_A 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANA 76 (83)
T ss_dssp CTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhH
Confidence 36789999999999999999999999999999 8888888888 99999999999999999997654
No 233
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.46 E-value=7.1e-14 Score=99.77 Aligned_cols=103 Identities=18% Similarity=0.301 Sum_probs=74.9
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHH
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEA 89 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 89 (149)
...+..+|..+|.|++|.|+.+||..++... ....+.+.+..+|..+|.+++|.|+.+||..++.........+++..+
T Consensus 380 ~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~-~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~ 458 (486)
T 3mwu_A 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDR-TILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESI 458 (486)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHHHHHHHHSCT-TTTCCHHHHHHHHHHHCSSCSSSBCSSCC-------------------
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHhh-hccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHH
Confidence 3457788999999999999999999887665 566778899999999999999999999999988766545555789999
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHh
Q 032008 90 FKVFDRDQDGFISAAELRNVMMNL 113 (149)
Q Consensus 90 f~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
|+.+|.|++|.|+.+||..++..+
T Consensus 459 ~~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 459 IEQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp -CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHHHHh
Confidence 999999999999999999998865
No 234
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=99.46 E-value=5.7e-13 Score=77.02 Aligned_cols=72 Identities=15% Similarity=0.318 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-----hcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 5 LTEDQIAEFQEAFCMID-KDSDG-LITMKDLATVIQS-----AQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
....++..+..+|..+| .+++| .|+.+||..++.. + +..++..++..++..+|.+++|.|+|+||+.++...
T Consensus 16 ~~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~l-g~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 16 PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFL-GKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGG-TTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhc-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 45677889999999999 89997 9999999999986 4 667788899999999999999999999999988654
No 235
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.45 E-value=5.2e-13 Score=85.29 Aligned_cols=101 Identities=15% Similarity=0.195 Sum_probs=83.0
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHhcCCC---------------CCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh-
Q 032008 14 QEAFCMIDKDSDGLITMKDLATVIQSAQDEH---------------PRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK- 77 (149)
Q Consensus 14 ~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~---------------~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~- 77 (149)
..+|..+|.+++|.|+.++|..++....... .....+..+|..+|.+++|.|+.+||..++...
T Consensus 64 ~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~ 143 (208)
T 2ct9_A 64 DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMV 143 (208)
T ss_dssp HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHS
T ss_pred HHHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHh
Confidence 4578889999999999999999887652111 146778999999999999999999999999875
Q ss_pred cccCcHHHHHHH----hhhhcCCCCCcccHHHHHHHHHHhC
Q 032008 78 MKENVSEELKEA----FKVFDRDQDGFISAAELRNVMMNLG 114 (149)
Q Consensus 78 ~~~~~~~~~~~~----f~~~D~~~~g~i~~~e~~~~l~~~~ 114 (149)
......+.+..+ |+.+|.+++|.|+.+||..++...+
T Consensus 144 g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 184 (208)
T 2ct9_A 144 GVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVD 184 (208)
T ss_dssp CTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 333445666665 9999999999999999999888654
No 236
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.45 E-value=2e-12 Score=79.58 Aligned_cols=90 Identities=18% Similarity=0.214 Sum_probs=78.7
Q ss_pred CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccH
Q 032008 24 SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISA 103 (149)
Q Consensus 24 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~ 103 (149)
.+|.|+..+|..++............+..+|..+|.+++|.|+.++|..++.........+.+..+|+.+|.+++|.|++
T Consensus 71 ~dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~ 150 (166)
T 2mys_B 71 ASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDY 150 (166)
T ss_pred CCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeH
Confidence 37999999999988766344557788999999999999999999999999987655566688999999999999999999
Q ss_pred HHHHHHHHHh
Q 032008 104 AELRNVMMNL 113 (149)
Q Consensus 104 ~e~~~~l~~~ 113 (149)
+||..++...
T Consensus 151 ~eF~~~~~~~ 160 (166)
T 2mys_B 151 KNICYVITHG 160 (166)
T ss_pred HHHHHHHHhc
Confidence 9999998763
No 237
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=99.45 E-value=5e-13 Score=77.29 Aligned_cols=63 Identities=22% Similarity=0.433 Sum_probs=57.6
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.+.+..+|+.+|.+++|+|+.+|+..++. +..++.+++..++..+|.|++|.|+++||+.++.
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH 75 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 36788999999999999999999999998 6668999999999999999999999999998875
No 238
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=99.45 E-value=1.5e-13 Score=80.24 Aligned_cols=64 Identities=23% Similarity=0.482 Sum_probs=56.6
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.||.+ +|+|+..||+.++.. ++...+++++..+++.+|.|++|.|+|+||+.++..
T Consensus 15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~ 83 (121)
T 4drw_A 15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 83 (121)
T ss_dssp HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 5688899999987 799999999999976 577788899999999999999999999999988753
No 239
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=99.45 E-value=7.5e-13 Score=76.04 Aligned_cols=72 Identities=21% Similarity=0.391 Sum_probs=65.8
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+ +.+...+..+|..+|.+++|.|+.++|..++..+ |..++..++..++..+|.+++|.|++++|+.++...
T Consensus 26 ~l-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~ 97 (107)
T 2d58_A 26 DL-PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKL-GVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97 (107)
T ss_dssp TH-HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSS
T ss_pred hh-HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHc
Confidence 35 6788899999999999999999999999999999 899999999999999999999999999999887544
No 240
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=99.45 E-value=8.5e-13 Score=76.58 Aligned_cols=88 Identities=14% Similarity=0.274 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhhhcC-CCCC-CccHHHHHHHHH-HhcCCC-----CCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 7 EDQIAEFQEAFCMIDK-DSDG-LITMKDLATVIQ-SAQDEH-----PRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~-~~~g-~i~~~e~~~~l~-~~~~~~-----~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
+.++..+..+|..+|. +++| .|+.+||..++. .+ +.. ++..++..++..+|.+++|.|+|+||+.++....
T Consensus 8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~l-g~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~ 86 (113)
T 1xk4_C 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDL-QNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT 86 (113)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHT-TTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHh-hhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH
Confidence 4567889999999994 9999 999999999998 55 532 5788999999999999999999999999987553
Q ss_pred ccCcHHHHHHHhhhhcCCCCCcc
Q 032008 79 KENVSEELKEAFKVFDRDQDGFI 101 (149)
Q Consensus 79 ~~~~~~~~~~~f~~~D~~~~g~i 101 (149)
......|...| +++|.-
T Consensus 87 -----~~~~~~f~~~~-~~~g~~ 103 (113)
T 1xk4_C 87 -----WASHEKMHEGD-EGPGHH 103 (113)
T ss_dssp -----HHHHC-------------
T ss_pred -----HHHHHHHhhCC-CCCccc
Confidence 34566777777 777653
No 241
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=99.45 E-value=3e-13 Score=76.10 Aligned_cols=65 Identities=20% Similarity=0.435 Sum_probs=53.0
Q ss_pred HHHHHHhhhhc-CCC-CCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQ-DGFISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~-~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+| .++ +|+|+.+|+..++.. +|...+++++..++..+|.|++|.|+|+||+.++..
T Consensus 9 ~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 57889999999 688 589999999999987 455678889999999999999999999999988753
No 242
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.45 E-value=2e-13 Score=76.87 Aligned_cols=70 Identities=17% Similarity=0.240 Sum_probs=63.3
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+++++.++++.+|..+|.+++|.|+.+++..++... + ++..++..++..+|.+++|.|+++||+..+...
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 73 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKT-G--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLI 73 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTT-T--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc-C--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999876 5 678899999999999999999999999887543
No 243
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=99.45 E-value=1.9e-13 Score=76.94 Aligned_cols=65 Identities=18% Similarity=0.360 Sum_probs=58.2
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQDG-FISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+| .+++| +|+.+|+..++.. +|..++++++..++..+|.|++|.|+|+||+.++..
T Consensus 12 ~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 12 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 57899999999 88887 9999999999986 566688999999999999999999999999988753
No 244
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=99.44 E-value=6.4e-13 Score=76.08 Aligned_cols=61 Identities=25% Similarity=0.467 Sum_probs=56.9
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+..+|+.+|+ ++|+|+.+|++.++...| ++.+++..++..+|.|++|.|+++||+.++.
T Consensus 15 ~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~ 75 (106)
T 1eh2_A 15 AKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMF 75 (106)
T ss_dssp HHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 678899999999 999999999999999876 7899999999999999999999999998875
No 245
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=99.44 E-value=3.4e-13 Score=75.50 Aligned_cols=65 Identities=28% Similarity=0.541 Sum_probs=60.3
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQDG-FISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+| .+++| +|+.+|+..++.. +|..++.+++..++..+|.+++|.|+++||+.++..
T Consensus 9 ~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 56889999999 79999 9999999999998 888899999999999999999999999999988753
No 246
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=99.43 E-value=9.3e-13 Score=76.14 Aligned_cols=70 Identities=17% Similarity=0.270 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+++++.+++..+|..+|.+++|.|+.+++..++. +..++..++..++..+|.+++|.|+++||+.++...
T Consensus 8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM---QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 6788899999999999999999999999999998 566789999999999999999999999999887543
No 247
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=99.43 E-value=1.5e-12 Score=73.05 Aligned_cols=66 Identities=39% Similarity=0.666 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHH
Q 032008 9 QIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMG 75 (149)
Q Consensus 9 ~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 75 (149)
..++++.+|..+|.+++|.|+.++|..++..+ +..++.+++..++..+|.+++|.|+++||+.++.
T Consensus 27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-TCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 34567888888888888888888888888888 7788888888888888888888888888887764
No 248
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=99.43 E-value=1.7e-12 Score=72.57 Aligned_cols=71 Identities=21% Similarity=0.444 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHhhhcCCCCC---CccHHHHHHHHHH-----hcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 6 TEDQIAEFQEAFCMIDKDSDG---LITMKDLATVIQS-----AQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g---~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+..+..+..+|..+| +++| .|+.+|+..++.. + +..++..++..++..+|.+++|.|+|+||+.++...
T Consensus 4 le~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~l-g~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 4 LEKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFL-EEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTS-CCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhc-cCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 3456788999999999 6655 9999999999998 6 788899999999999999999999999999988654
Q ss_pred c
Q 032008 78 M 78 (149)
Q Consensus 78 ~ 78 (149)
.
T Consensus 82 ~ 82 (92)
T 3rm1_A 82 T 82 (92)
T ss_dssp H
T ss_pred H
Confidence 3
No 249
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.43 E-value=3.8e-14 Score=81.53 Aligned_cols=100 Identities=21% Similarity=0.244 Sum_probs=80.6
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh---ccc
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK---MKE 80 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~---~~~ 80 (149)
.+++.++++ +|..+| ++|.|+.++|..++.. .......++.+|..+|.+++|.|+.++|...+... ...
T Consensus 5 ~~~~~e~~~---l~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2kyc_A 5 ILSPSDIAA---ALRDCQ--APDSFSPKKFFQISGM---SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARV 76 (108)
T ss_dssp SSCHHHHHH---HHTTSC--STTTCCHHHHHHHHTC---TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCC
T ss_pred cCCHHHHHH---HHHHcC--CCCcCCHHHHHHHHhh---CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCC
Confidence 455555554 566677 7899999999998742 23445678999999999999999999999988776 334
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
...+.+..+++.+|.+++|.|+.+||..++.
T Consensus 77 ~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 77 LTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp CCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 4557889999999999999999999998775
No 250
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.43 E-value=1.2e-13 Score=79.75 Aligned_cols=65 Identities=25% Similarity=0.337 Sum_probs=58.6
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
...+.+..+|+.+|.+++|+|+.+|++.++...| ++.+++..+|..+|.|++|.|+++||+.++.
T Consensus 19 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~ 83 (110)
T 1iq3_A 19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp SSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 3447899999999999999999999999998776 6777899999999999999999999998875
No 251
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.43 E-value=3.7e-12 Score=80.67 Aligned_cols=96 Identities=11% Similarity=0.027 Sum_probs=84.0
Q ss_pred HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHH
Q 032008 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLSDEETEQM 125 (149)
Q Consensus 47 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~ 125 (149)
...+..+|..+|.+++|.|+..+|..++...........+..++..+ +|.|+++||..++... ........+..+
T Consensus 56 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~ 131 (196)
T 3dtp_E 56 VQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVNA 131 (196)
T ss_dssp HHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 45788999999999999999999999998776666668888888877 8999999999999864 334567889999
Q ss_pred HHhhCcCCCCceeHHHHHHHH
Q 032008 126 IREADLDGDGLVSFEEFARMM 146 (149)
Q Consensus 126 ~~~~d~~~~g~i~~~ef~~~l 146 (149)
|..+|.|++|.|+.+||..++
T Consensus 132 F~~~D~d~~G~Is~~El~~~l 152 (196)
T 3dtp_E 132 FNLFDEGDGKCKEETLKRSLT 152 (196)
T ss_dssp HHTTCSSSSCCBHHHHHHHHH
T ss_pred HHHHCCCCCCcCcHHHHHHHH
Confidence 999999999999999999987
No 252
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=99.43 E-value=1.1e-12 Score=75.17 Aligned_cols=69 Identities=16% Similarity=0.243 Sum_probs=63.0
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+++++..+++.+|..+|+ ++|.|+.+++..++... + ++..++..++..+|.+++|.|+++||+..+...
T Consensus 9 ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~-g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 9 VKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNS-K--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp SCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTT-T--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHc-C--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 678899999999999999 99999999999999876 5 678899999999999999999999999887543
No 253
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.43 E-value=8.1e-14 Score=90.29 Aligned_cols=101 Identities=21% Similarity=0.215 Sum_probs=76.6
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhccc-CcH----HHHHHHhhhh-----cCCCCCcccHHHHHHHHHHhCCCC
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-NVS----EELKEAFKVF-----DRDQDGFISAAELRNVMMNLGERL 117 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~~~----~~~~~~f~~~-----D~~~~g~i~~~e~~~~l~~~~~~~ 117 (149)
..+..+|..+|.+++|.|++.||...+...... ... ..+..+|..+ |.+++|.|+++||..++.......
T Consensus 51 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~ 130 (226)
T 2lvv_A 51 SRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYIY 130 (226)
T ss_dssp HHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhcc
Confidence 457888999999999999999999855443322 222 3445555555 999999999999999644332222
Q ss_pred CHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 118 SDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 118 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
....+..+|..+|.|++|.|+.+||..++..
T Consensus 131 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 161 (226)
T 2lvv_A 131 DIFELTVMFDTMDKDGSLLLELQEFKEALPK 161 (226)
T ss_dssp HHHHHHHHHHHHSCSSCCEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence 3568999999999999999999999998753
No 254
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.43 E-value=2.6e-12 Score=80.34 Aligned_cols=105 Identities=11% Similarity=0.190 Sum_probs=80.5
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHH-hhccc-C----
Q 032008 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMG-RKMKE-N---- 81 (149)
Q Consensus 8 ~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~-~~~~~-~---- 81 (149)
..+.++...+...+.+++|.|+..+|..++..+ ......+.++.+|..+|.+++|.|+.+|+...+. ..... .
T Consensus 59 ~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~-~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~ 137 (179)
T 3a8r_A 59 EFAVQMFDSLARKRGIVKQVLTKDELKDFYEQL-TDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIK 137 (179)
T ss_dssp HHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHH-HCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHH-cCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccc
Confidence 334444444444435678899999999987766 3344567899999999999999999999999886 33221 1
Q ss_pred --cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh
Q 032008 82 --VSEELKEAFKVFDRDQDGFISAAELRNVMMNL 113 (149)
Q Consensus 82 --~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
..+.+..+|+.+|.+++|.|+++||..++...
T Consensus 138 ~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 171 (179)
T 3a8r_A 138 ERADEYTALIMEELDPTNLGYIEMEDLEALLLQS 171 (179)
T ss_dssp HHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC--
T ss_pred cchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 45789999999999999999999999988753
No 255
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.42 E-value=2.3e-12 Score=77.70 Aligned_cols=96 Identities=9% Similarity=0.073 Sum_probs=84.2
Q ss_pred HHHHHHhhccCCC-CCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHH
Q 032008 49 EVQEMISEVDFDG-NGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLSDEETEQMI 126 (149)
Q Consensus 49 ~~~~~~~~~d~~~-~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~ 126 (149)
+++.+|..+|.++ +|.|+..+|...+...........+..+++.+|.+ |+.+||..++... ........+..+|
T Consensus 15 ~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~~F 90 (146)
T 2qac_A 15 DESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIKMF 90 (146)
T ss_dssp CHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHHHH
T ss_pred HHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHHHH
Confidence 4788999999999 99999999999998776666778899999999987 9999999999864 3345678899999
Q ss_pred HhhCcCCCCceeHHHHHHHHhc
Q 032008 127 READLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+|.+++|.|+.+||..++..
T Consensus 91 ~~~D~d~~G~I~~~el~~~l~~ 112 (146)
T 2qac_A 91 AHFDNNCTGYLTKSQMKNILTT 112 (146)
T ss_dssp HTTCTTCSSEEEHHHHHHHHHH
T ss_pred HHhCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999998764
No 256
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=99.42 E-value=2e-12 Score=72.32 Aligned_cols=72 Identities=15% Similarity=0.309 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHhhhc-CCCC-CCccHHHHHHHHHH-hc---CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 6 TEDQIAEFQEAFCMID-KDSD-GLITMKDLATVIQS-AQ---DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d-~~~~-g~i~~~e~~~~l~~-~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+..+..+..+|+.+| .+++ |.|+.+|++.++.. +. +..++..++..+++.+|.+++|.|+|+||+.++...
T Consensus 5 le~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 5 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 4567789999999998 6774 89999999999986 41 234688999999999999999999999999988654
No 257
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=99.42 E-value=2.5e-12 Score=73.30 Aligned_cols=73 Identities=15% Similarity=0.311 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHhhhc-CCCC-CCccHHHHHHHHHH-hc---CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 6 TEDQIAEFQEAFCMID-KDSD-GLITMKDLATVIQS-AQ---DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d-~~~~-g~i~~~e~~~~l~~-~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
.+..+..+..+|+.+| .+++ |.|+.+||..++.. +. +..++..++..++..+|.+++|.|+|+||+.++....
T Consensus 8 le~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~~ 86 (104)
T 3zwh_A 8 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIA 86 (104)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 4556789999999997 6775 89999999999986 41 3456899999999999999999999999999887553
No 258
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=99.41 E-value=2.1e-12 Score=73.09 Aligned_cols=70 Identities=14% Similarity=0.325 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-----hcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 7 EDQIAEFQEAFCMID-KDSDG-LITMKDLATVIQS-----AQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+.++..+..+|..+| .+++| .|+.++|..++.. + +..++..++..++..+|.+++|.|+|+||+.++...
T Consensus 6 ~~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~l-g~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFL-MSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGG-TTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhc-cccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 456788999999997 88887 9999999999987 4 567899999999999999999999999999988654
No 259
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.41 E-value=9.4e-14 Score=87.07 Aligned_cols=96 Identities=14% Similarity=0.174 Sum_probs=75.4
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHhcCCCC-CHHHHHHHH--hhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhh
Q 032008 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHP-RKEEVQEMI--SEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFK 91 (149)
Q Consensus 15 ~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~--~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~ 91 (149)
.+|..+|.+++|.|+.++ .++... .... ...++...| ..+|.+++|.|++++|..++.........+.+..+|+
T Consensus 69 ~~f~~~D~d~dg~I~~~E--~~~~~~-~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~ 145 (186)
T 2hps_A 69 GLAPGVRISVEEAAVNAT--DSLLKM-KGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFN 145 (186)
T ss_dssp TCCTTCEEEHHHHHHHHH--HHHHHC-CTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred HHHHhcCCCCCCcccHHH--HHHHHh-cCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 347899999999999999 555544 2211 112333333 6669999999999999999987755566788999999
Q ss_pred hhcCCCCCcccHHHHHHHHHHh
Q 032008 92 VFDRDQDGFISAAELRNVMMNL 113 (149)
Q Consensus 92 ~~D~~~~g~i~~~e~~~~l~~~ 113 (149)
.+|.+++|.|+.+||..++..+
T Consensus 146 ~~D~d~dG~i~~~ef~~~~~~~ 167 (186)
T 2hps_A 146 TLDFNKNGQISRDEFLVTVNDF 167 (186)
T ss_dssp HHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHcCCCCCcCcHHHHHHHHHHH
Confidence 9999999999999999998865
No 260
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=99.41 E-value=1.4e-13 Score=75.43 Aligned_cols=71 Identities=30% Similarity=0.429 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcC--CCCCHHHHHH----HHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQD--EHPRKEEVQE----MISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~----~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
+...+++..+|..+|.+++|.|+.++|..++... + ..++.+++.. ++..+|.+++|.|+++||+..+....
T Consensus 3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~~ 79 (83)
T 1yx7_A 3 CKVKAELEAAFKKLDANGDGYVTALELQTFMVTL-DAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAELL 79 (83)
T ss_dssp SCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHH-TTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH-ccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHHH
Confidence 3455678999999999999999999999999998 7 7788888888 99999999999999999987765543
No 261
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=99.41 E-value=1.2e-12 Score=78.08 Aligned_cols=63 Identities=27% Similarity=0.341 Sum_probs=58.6
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..+.++.+|+.+| +++|+|+.+|++.+|...+ ++.+++..+|..+|.|++|.|+|+||+.++.
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~g--l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~ 111 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSK--LPNTVLGKIWKLADVDKDGLLDDEEFALANH 111 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 3478999999999 9999999999999999876 7899999999999999999999999999875
No 262
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.41 E-value=9.4e-13 Score=80.05 Aligned_cols=96 Identities=15% Similarity=0.241 Sum_probs=81.6
Q ss_pred HHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHH
Q 032008 49 EVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNL-GERLSDEETEQMIR 127 (149)
Q Consensus 49 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~ 127 (149)
.+..+|..+|.+++|.|+..+|...+...........+..++..+ +|.|+++||..++... ........+..+|.
T Consensus 17 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~ 92 (153)
T 2ovk_B 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTDPEDALRNAFS 92 (153)
T ss_dssp HHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTTTCCCTTHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 467888999999999999999999988766666668888888877 8999999999988753 22335678999999
Q ss_pred hhCcCCCCceeHHHHHHHHhc
Q 032008 128 EADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 128 ~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|.+++|.|+.+||..++..
T Consensus 93 ~~D~d~~G~I~~~el~~~l~~ 113 (153)
T 2ovk_B 93 MFDEDGQGFIPEDYLKDLLEN 113 (153)
T ss_dssp TTCSSCSSCCCHHHHHHHHHH
T ss_pred HHCCCCCCeEcHHHHHHHHHH
Confidence 999999999999999998864
No 263
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=99.41 E-value=2.2e-12 Score=73.14 Aligned_cols=65 Identities=23% Similarity=0.353 Sum_probs=55.8
Q ss_pred HHHHHHhhhhcCCC---CCcccHHHHHHHHHHhC-CCCC----HHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQ---DGFISAAELRNVMMNLG-ERLS----DEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~---~g~i~~~e~~~~l~~~~-~~~~----~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.||.++ +|+|+.+||+.++...+ ..++ ++++..++..+|.|++|.|+|+||+.++..
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~ 83 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGG 83 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 67899999999863 79999999999998753 3333 688999999999999999999999998764
No 264
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=99.41 E-value=1.2e-12 Score=73.63 Aligned_cols=71 Identities=14% Similarity=0.326 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-----hcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 6 TEDQIAEFQEAFCMID-KDSDG-LITMKDLATVIQS-----AQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+.++..++.+|..+| ++++| .|+.++|..++.. + +..++..++..++..+|.+++|.|+|+||+.++...
T Consensus 7 ~e~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~l-g~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~ 84 (95)
T 2wcb_A 7 LEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTI-KNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 84 (95)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHH-HHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhc-cccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 4556789999999999 88887 9999999999986 4 567889999999999999999999999999988644
No 265
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.40 E-value=2.6e-14 Score=79.09 Aligned_cols=67 Identities=31% Similarity=0.618 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHH
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLT 72 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~ 72 (149)
+++.+++++..+|..+|++++|.|+.++|..++..+ +..++.+++..++..+|.+++|.|++++|+.
T Consensus 17 l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~ 83 (87)
T 1s6j_A 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV-GSELMESEIKDLMDAADIDKSGTIDYGEFIA 83 (87)
T ss_dssp SCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTT-TSSCCHHHHHHHHHHHCTTCSSEECHHHHTT
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 344444556666666666666666666666666666 6666666666666666666666666666653
No 266
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=99.40 E-value=1.5e-12 Score=79.00 Aligned_cols=64 Identities=28% Similarity=0.487 Sum_probs=52.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+..+|+.+|.+++|+|+.+|+..++..+|..++..++..++..+|.+++|.|+++||+.++.
T Consensus 48 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~ 111 (147)
T 1wy9_A 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMML 111 (147)
T ss_dssp HHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 5677888888888888888888888888888778888888888888888888888888887764
No 267
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=99.40 E-value=5.7e-13 Score=70.75 Aligned_cols=66 Identities=30% Similarity=0.566 Sum_probs=59.7
Q ss_pred HHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHH
Q 032008 9 QIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMG 75 (149)
Q Consensus 9 ~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 75 (149)
..+++..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|++++|+.++.
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGL-GQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGT-TCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 34678889999999999999999999999988 8889999999999999999999999999988764
No 268
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=99.40 E-value=6.6e-13 Score=74.26 Aligned_cols=64 Identities=17% Similarity=0.457 Sum_probs=57.0
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHHh---CCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQDG-FISAAELRNVMMNL---GERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~g-~i~~~e~~~~l~~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..++.+|+.+| .+++| +|+.+|+..++... +. +++.++..++..+|.|++|.|+++||+.++..
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 56889999999 99999 99999999999873 23 77888999999999999999999999988753
No 269
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=99.39 E-value=1.8e-12 Score=70.11 Aligned_cols=65 Identities=31% Similarity=0.619 Sum_probs=59.3
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+++..+|..+|.+++|.|+.++|..++..+ + .++.+++..++..+|.+++|.|++++|+.++...
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTL-G-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHH-H-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-C-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 357889999999999999999999999999 7 8899999999999999999999999999888654
No 270
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=99.39 E-value=2.1e-12 Score=72.21 Aligned_cols=71 Identities=24% Similarity=0.492 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-----hcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 6 TEDQIAEFQEAFCMID-KDSDG-LITMKDLATVIQS-----AQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d-~~~~g-~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+.+..++..+|..+| .+++| .|+.++|..++.. + +..++..++..++..+|.+++|.|++++|+.++...
T Consensus 4 l~~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~-g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 81 (93)
T 1k2h_A 4 LETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFL-DVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHH-HCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4566788999999999 79999 9999999999997 7 888999999999999999999999999999888654
No 271
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=99.39 E-value=5.8e-13 Score=74.02 Aligned_cols=65 Identities=26% Similarity=0.509 Sum_probs=59.6
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHH---hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQDG-FISAAELRNVMMN---LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~g-~i~~~e~~~~l~~---~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+| .+++| +|+.+|+..++.. +|..++..++..++..+|.|++|.|+++||+.++..
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 79 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 79 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 56889999999 59999 9999999999997 888889999999999999999999999999988753
No 272
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.39 E-value=1.8e-14 Score=92.91 Aligned_cols=118 Identities=20% Similarity=0.164 Sum_probs=82.3
Q ss_pred CCccHHHHHHHHHHhcCCCCCHH---HHHHHHhhccCCCCCcccHHHHHHHHHhhccc-CcHH----HHHHHhhhh----
Q 032008 26 GLITMKDLATVIQSAQDEHPRKE---EVQEMISEVDFDGNGSIDFLEFLTIMGRKMKE-NVSE----ELKEAFKVF---- 93 (149)
Q Consensus 26 g~i~~~e~~~~l~~~~~~~~~~~---~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-~~~~----~~~~~f~~~---- 93 (149)
+.++..++...+ ...++.+ .+..+|..+|.+++|.|+..||...+...+.. ...+ .+..+|..+
T Consensus 27 ~~~~~~~l~~~~----~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 102 (219)
T 3cs1_A 27 RKEAWERIRQAI----PREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLG 102 (219)
T ss_dssp HHHHHHHHHHHS----CCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhh
Confidence 444444444433 3344443 46789999999999999999999888653222 2222 233333322
Q ss_pred -cCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 94 -DRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 94 -D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+++|.|+..||..++.........+.+..+|..+|.|++|.|+.+||..++.
T Consensus 103 ~~~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~ 157 (219)
T 3cs1_A 103 SKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVP 157 (219)
T ss_dssp HHHHTSCCCSSBCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHH
T ss_pred hccCCCCcCCHHHHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 348899999999998875443222456799999999999999999999999875
No 273
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=99.39 E-value=3.6e-13 Score=72.85 Aligned_cols=66 Identities=30% Similarity=0.514 Sum_probs=59.4
Q ss_pred HHHHHHHhhhhcC-CCCC-cccHHHHHHHHHH-hCCCC-CHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 83 SEELKEAFKVFDR-DQDG-FISAAELRNVMMN-LGERL-SDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 83 ~~~~~~~f~~~D~-~~~g-~i~~~e~~~~l~~-~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+.+..+|+.+|. +++| .|+.+|+..++.. +|..+ +.+++..++..+|.+++|.|+++||+.++..
T Consensus 6 ~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 6 PAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp HHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 3678999999999 9999 9999999999986 77766 7888999999999999999999999998764
No 274
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=99.39 E-value=7e-12 Score=71.02 Aligned_cols=74 Identities=18% Similarity=0.312 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHhhhcCCC---CCCccHHHHHHHHHHhcCCCCC----HHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 6 TEDQIAEFQEAFCMIDKDS---DGLITMKDLATVIQSAQDEHPR----KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~---~g~i~~~e~~~~l~~~~~~~~~----~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
.+..+..+..+|..+|.++ +|.|+.+||..++....+..++ ..++..++..+|.+++|.|+|+||+.++....
T Consensus 6 le~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 6 LEKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp HHHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 3566788999999999863 7999999999999876343333 67899999999999999999999999987654
Q ss_pred c
Q 032008 79 K 79 (149)
Q Consensus 79 ~ 79 (149)
.
T Consensus 86 ~ 86 (100)
T 3nxa_A 86 G 86 (100)
T ss_dssp G
T ss_pred H
Confidence 3
No 275
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=99.39 E-value=1.8e-12 Score=72.90 Aligned_cols=71 Identities=17% Similarity=0.410 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhhhc-CCC-CCCccHHHHHHHHHHh----cCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 7 EDQIAEFQEAFCMID-KDS-DGLITMKDLATVIQSA----QDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d-~~~-~g~i~~~e~~~~l~~~----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+.++..++.+|..+| .++ +|.|+.++|..++... .+..++..++..++..+|.+++|.|+|+||+.++...
T Consensus 5 ~~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 456788999999999 788 5899999999999873 1456778899999999999999999999999988654
No 276
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.39 E-value=5.6e-12 Score=76.93 Aligned_cols=96 Identities=14% Similarity=0.240 Sum_probs=78.8
Q ss_pred HHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHH
Q 032008 49 EVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGE-RLSDEETEQMIR 127 (149)
Q Consensus 49 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~ 127 (149)
+++.+|..+|.+++|.|+..++...+.........+.+..+. .+++|.|+.++|...+..... .-+.+.+..+|+
T Consensus 17 elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~----~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~aF~ 92 (153)
T 3i5g_B 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML----KECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFS 92 (153)
T ss_dssp HHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHH----HTSSSCCCSHHHHHTTTTTTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHH----HhccCCccHHHHHHHHHhhhcccccHHHHHHHHh
Confidence 467789999999999999999999998877776666655554 456778999999888765432 335788999999
Q ss_pred hhCcCCCCceeHHHHHHHHhc
Q 032008 128 EADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 128 ~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+|.+++|.|+.+|+.++|..
T Consensus 93 ~fD~d~~G~I~~~el~~~l~~ 113 (153)
T 3i5g_B 93 MFDEDGQGFIPEDYLKDLLEN 113 (153)
T ss_dssp TTCSSCSSCCCHHHHHHHHHS
T ss_pred ccccCCCCeEeHHHHHHHHHH
Confidence 999999999999999998865
No 277
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=99.38 E-value=1.1e-12 Score=75.13 Aligned_cols=65 Identities=18% Similarity=0.364 Sum_probs=55.8
Q ss_pred HHHHHHhhhhc-CCCC-CcccHHHHHHHHHH-hCCCCC-HHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFD-RDQD-GFISAAELRNVMMN-LGERLS-DEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~-g~i~~~e~~~~l~~-~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.|| .+++ |+|+.+||..++.. +|...+ ++++..++..+|.|++|.|+|+||+.++..
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~ 90 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 90 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 57899999999 7886 79999999999986 564443 468999999999999999999999988753
No 278
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=99.38 E-value=4.6e-12 Score=72.41 Aligned_cols=69 Identities=12% Similarity=0.281 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 8 ~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.....+..+|..+|.+++|.|+.++|..++..+ +..++..++..++..+|.+++|.|+|++|+.++...
T Consensus 21 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 21 SHYHAITQEFENFDTMKTNTISREEFRAICNRR-VQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSE 89 (105)
T ss_dssp HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-TCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC--
T ss_pred chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcc
Confidence 345678899999999999999999999999998 889999999999999999999999999999887643
No 279
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=99.37 E-value=3.4e-13 Score=75.58 Aligned_cols=64 Identities=14% Similarity=0.386 Sum_probs=55.1
Q ss_pred HHHHHHhhhhcC-CCCC-cccHHHHHHHH-HHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDR-DQDG-FISAAELRNVM-MNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~-~~~g-~i~~~e~~~~l-~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+..+|+.+|. +++| +|+.+|+..++ ..+|..++..++..++..+|.|++|.|+++||+.++.
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~ 76 (93)
T 1xk4_A 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVI 76 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 568889999999 9999 99999999999 6677555556788999999999999999999998775
No 280
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=99.37 E-value=3.5e-12 Score=73.97 Aligned_cols=65 Identities=20% Similarity=0.377 Sum_probs=53.6
Q ss_pred HHHHHHhhhhcC-CCCC-cccHHHHHHHHH-HhCCC-----CCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDR-DQDG-FISAAELRNVMM-NLGER-----LSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~-~~~g-~i~~~e~~~~l~-~~~~~-----~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.++.+|+.+|. +++| +|+.+||..++. .+|.. ++..++..++..+|.|++|.|+++||+.++..
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 84 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 84 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 567888999994 8998 999999999988 66642 57888899999999999999999999887653
No 281
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=99.36 E-value=2.9e-13 Score=70.89 Aligned_cols=61 Identities=26% Similarity=0.471 Sum_probs=48.5
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHH
Q 032008 14 QEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMG 75 (149)
Q Consensus 14 ~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 75 (149)
+.+|..+|.+++|.|+.++|..++..+ +..++.+++..++..+|.+++|.|+++||+.++.
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHc-cCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 467888888888888888888888877 6667777788888888888888888888877664
No 282
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=99.35 E-value=1.7e-12 Score=69.79 Aligned_cols=67 Identities=33% Similarity=0.523 Sum_probs=59.4
Q ss_pred HHHHHHHHhhh-cCCCC-CCccHHHHHHHHHHhcCCCC--CHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 10 IAEFQEAFCMI-DKDSD-GLITMKDLATVIQSAQDEHP--RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 10 ~~~l~~~f~~~-d~~~~-g~i~~~e~~~~l~~~~~~~~--~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+++..+|..+ |.+++ |.|+.++|..++..+ +..+ +.+++..++..+|.+++|.|++++|+.++...
T Consensus 4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 74 (76)
T 1qx2_A 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTL-GPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHH-GGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHh-CCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 45788899999 99999 999999999999998 7777 88889999999999999999999999887643
No 283
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=99.35 E-value=7e-13 Score=72.28 Aligned_cols=68 Identities=32% Similarity=0.593 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcC-CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHh
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQD-EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGR 76 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 76 (149)
+...+++. +|..+|.+++|.|+.++|..++..+ + ..++..++..++..+|.+++|.|++++|+.++..
T Consensus 5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 73 (81)
T 1c7v_A 5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIMQKV-GEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 73 (81)
T ss_dssp --CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTT-TTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHh-CCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 44567788 9999999999999999999999888 8 8889999999999999999999999999988754
No 284
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=99.34 E-value=3.4e-12 Score=71.33 Aligned_cols=72 Identities=14% Similarity=0.313 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHHhcCC-CCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 6 TEDQIAEFQEAFCMID-KDSDG-LITMKDLATVIQSAQDE-HPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d-~~~~g-~i~~~e~~~~l~~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+.++..+..+|..+| ++++| .|+.++|..++....+. .++..++..++..+|.+++|.|+|+||+.++...
T Consensus 5 l~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 5 LEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3456788999999999 99999 99999999999874231 2777889999999999999999999999988654
No 285
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.33 E-value=2.5e-13 Score=78.39 Aligned_cols=70 Identities=17% Similarity=0.221 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+++++.++++++|..+|++++|.|+.+++..++... + ++.+++..++..+|.+++|.|+++||+..+...
T Consensus 16 ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKS-K--LSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp CSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSS-S--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc-C--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 566788899999999999999999999999998766 4 566789999999999999999999999887543
No 286
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=99.33 E-value=2.6e-12 Score=73.51 Aligned_cols=72 Identities=11% Similarity=0.317 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhhhc-CCCC-CCccHHHHHHHHHHhcCCCC-CHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 7 EDQIAEFQEAFCMID-KDSD-GLITMKDLATVIQSAQDEHP-RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d-~~~~-g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
+.++..+..+|..+| .+++ |.|+.++|..++....+... +..++..++..+|.+++|.|+|+||+.++....
T Consensus 18 e~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~~ 92 (106)
T 2h2k_A 18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA 92 (106)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 455788999999999 7886 79999999999986325333 346899999999999999999999999887553
No 287
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.32 E-value=1.8e-12 Score=73.45 Aligned_cols=67 Identities=13% Similarity=0.228 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 8 ~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
++.+.++.+|..+|++++|.|+.+++..++... + ++..++..+|..+|.+++|.|+++||+..+...
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKS-G--LPDLILGKIWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS-S--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc-C--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 445678999999999999999999999999876 5 578899999999999999999999999888543
No 288
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=99.32 E-value=2.1e-12 Score=72.73 Aligned_cols=64 Identities=22% Similarity=0.462 Sum_probs=54.6
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHH-----hCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMN-----LGERLSDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
+.+..+|+.+|. ++|+|+.+|+..++.. +|..++.+++..++..+|.|++|.|+|+||+.++..
T Consensus 9 ~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~ 77 (96)
T 1a4p_A 9 ETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (96)
T ss_dssp HHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 568899999994 5679999999999986 455678889999999999999999999999987753
No 289
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=99.32 E-value=3.8e-12 Score=70.64 Aligned_cols=70 Identities=19% Similarity=0.430 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH---hcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 7 EDQIAEFQEAFCMID-KDSDG-LITMKDLATVIQS---AQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d-~~~~g-~i~~~e~~~~l~~---~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+.....+..+|..+| ++++| .|+.++|..++.. + +..++..++..++..+|.+++|.|++++|+.++...
T Consensus 6 ~~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~-g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 6 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTI-GSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCC-GGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhccc-CCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 345678999999999 59999 9999999999997 6 778888999999999999999999999999887644
No 290
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=99.31 E-value=9.3e-12 Score=70.98 Aligned_cols=64 Identities=23% Similarity=0.405 Sum_probs=54.2
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHH-----hCCCCCH-----------HHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 85 ELKEAFKVFDRDQDGFISAAELRNVMMN-----LGERLSD-----------EETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 85 ~~~~~f~~~D~~~~g~i~~~e~~~~l~~-----~~~~~~~-----------~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
.+..+|+.+|.+++|+|+.+|+..++.. .|...+. ..+..++..+|.|++|.|+++||+.++.+
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 100 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 100 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHhc
Confidence 4788999999999999999999999986 4654432 34888999999999999999999998754
No 291
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=99.31 E-value=6.8e-12 Score=70.92 Aligned_cols=77 Identities=23% Similarity=0.434 Sum_probs=61.2
Q ss_pred CchhhhH--HHHHHHHHHHhhhc-CCCCC-CccHHHHHHHHHH-hc---CCCCCHHHHHHHHhhccCCCCCcccHHHHHH
Q 032008 1 MADALTE--DQIAEFQEAFCMID-KDSDG-LITMKDLATVIQS-AQ---DEHPRKEEVQEMISEVDFDGNGSIDFLEFLT 72 (149)
Q Consensus 1 ~~~~l~~--~~~~~l~~~f~~~d-~~~~g-~i~~~e~~~~l~~-~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~ 72 (149)
|+..+++ .....+..+|..+| .+++| .|+.++|..++.. +. +..++..++..++..+|.+++|.|+++||+.
T Consensus 1 ma~~~~~~~~~~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~ 80 (99)
T 1qls_A 1 MAKRPTETERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLN 80 (99)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred CCcccChHHHHHHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 3444444 34568999999998 99999 9999999999984 30 3567888999999999999999999999998
Q ss_pred HHHhh
Q 032008 73 IMGRK 77 (149)
Q Consensus 73 ~~~~~ 77 (149)
++...
T Consensus 81 ~~~~~ 85 (99)
T 1qls_A 81 LIGGL 85 (99)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 292
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=99.31 E-value=2.6e-12 Score=71.96 Aligned_cols=70 Identities=17% Similarity=0.341 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhhhcC-CCCC-CccHHHHHHHH-HHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 7 EDQIAEFQEAFCMIDK-DSDG-LITMKDLATVI-QSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~-~~~g-~i~~~e~~~~l-~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+..+..+..+|..+|. +++| .|+.++|..++ ..+ +..++..++..++..+|.+++|.|+++||+.++...
T Consensus 6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~-g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETES-PQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHS-CHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHC-cccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 4556789999999999 9999 99999999999 555 655555678999999999999999999999887654
No 293
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=99.30 E-value=1.2e-12 Score=74.24 Aligned_cols=63 Identities=19% Similarity=0.335 Sum_probs=52.2
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHH-----hCC--CCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMN-----LGE--RLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~-----~~~--~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+..+|+.+|.+ +|+|+.+|+..+++. +|. .++++++..++..+|.|++|.|+|+||+.++.
T Consensus 10 ~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~ 79 (100)
T 1psr_A 10 IGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 5688899999865 789999999999886 344 56777888899999999999999999988765
No 294
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=99.30 E-value=5.1e-12 Score=71.44 Aligned_cols=64 Identities=30% Similarity=0.457 Sum_probs=56.0
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHHHH-h----CCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFD-RDQDG-FISAAELRNVMMN-L----GERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D-~~~~g-~i~~~e~~~~l~~-~----~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
+.+..+|+.+| .+++| +|+.+|+..++.. + |..+++.++..++..+|.|++|.|+++||+.++.
T Consensus 13 ~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~ 83 (99)
T 1qls_A 13 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIG 83 (99)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 56888999998 99999 9999999999984 3 3567888999999999999999999999998765
No 295
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=99.27 E-value=2.7e-11 Score=64.72 Aligned_cols=59 Identities=19% Similarity=0.437 Sum_probs=53.1
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhC-cC----CCCceeHHHHHHHHhc
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREAD-LD----GDGLVSFEEFARMMMA 148 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~----~~g~i~~~ef~~~l~~ 148 (149)
..+.+..+|+.+ ++++|+|+..+++. .++++++..+++.++ .+ ++|.|+|++|+++|..
T Consensus 8 ~~eel~eAFr~f-~dg~G~It~~eLr~-------~lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~~ 71 (75)
T 1h8b_A 8 TAEQVIASFRIL-ASDKPYILAEELRR-------ELPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG 71 (75)
T ss_dssp THHHHHHHHHHH-TTSCSSBCHHHHHH-------HSCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred CHHHHHHHHHHH-hcCCCCcCHHHHHh-------cCCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHhc
Confidence 458899999999 99999999999998 389999999999999 56 5799999999998753
No 296
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=99.27 E-value=1.7e-11 Score=71.14 Aligned_cols=62 Identities=26% Similarity=0.415 Sum_probs=56.7
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 83 SEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 83 ~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
...++.+|+.+|+ ++|+|+.++++.++...+ ++.+++..+|+..|.|++|.|+++||+.+|.
T Consensus 32 ~~~y~~iF~~lD~-~dG~Isg~elr~~~~~sg--Lp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~ 93 (121)
T 3fia_A 32 RAKHDQQFHSLKP-ISGFITGDQARNFFFQSG--LPQPVLAQIWALADMNNDGRMDQVEFSIAMK 93 (121)
T ss_dssp HHHHHHHHHHTCC-BTTBEEHHHHHHHHGGGC--CCHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCeECHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCCHHHHHHHHH
Confidence 3678999999998 899999999999999875 7899999999999999999999999998763
No 297
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=99.27 E-value=1.7e-11 Score=73.13 Aligned_cols=67 Identities=16% Similarity=0.182 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.++..+++.+|..+| +++|.|+.+++..+|... + ++..++..+|..+|.+++|.|+|+||+..+...
T Consensus 47 ~~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~-g--l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li 113 (139)
T 2jq6_A 47 GKDKPTYDEIFYTLS-PVNGKITGANAKKEMVKS-K--LPNTVLGKIWKLADVDKDGLLDDEEFALANHLI 113 (139)
T ss_dssp GGTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHHT-T--CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhC-CCCCeECHHHHHHHHHHh-C--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 356888999999999 999999999999999986 5 678899999999999999999999999887543
No 298
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.26 E-value=1.8e-12 Score=94.82 Aligned_cols=97 Identities=13% Similarity=0.202 Sum_probs=34.0
Q ss_pred HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHH
Q 032008 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMI 126 (149)
Q Consensus 47 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~ 126 (149)
...++.+|..+|.+++|.|+++||..++.........+++..+|+.+|.+++|.|+.+||..++..+. ..+++..+|
T Consensus 10 e~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~---~~~el~~aF 86 (624)
T 1djx_A 10 QHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT---QRAEIDRAF 86 (624)
T ss_dssp ----------------------------------------------------------CTTHHHHHHT---CCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc---cHHHHHHHH
Confidence 34678899999999999999999999987665555557899999999999999999999999998864 346899999
Q ss_pred HhhCcCCCCceeHHHHHHHHh
Q 032008 127 READLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..+|.+ +|.|+++||.++|.
T Consensus 87 ~~fD~~-~G~Is~~EL~~fL~ 106 (624)
T 1djx_A 87 EEAAGS-AETLSVERLVTFLQ 106 (624)
T ss_dssp HHHHTT-SSSEEHHHHHHHHH
T ss_pred HHhcCC-CCeecHHHHHHHHH
Confidence 999975 89999999999886
No 299
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=99.26 E-value=5.9e-12 Score=67.95 Aligned_cols=69 Identities=20% Similarity=0.380 Sum_probs=58.8
Q ss_pred HHHHHHHHHhhhcC-CCCC-CccHHHHHHHHHHhcCCCC-CHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 9 QIAEFQEAFCMIDK-DSDG-LITMKDLATVIQSAQDEHP-RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 9 ~~~~l~~~f~~~d~-~~~g-~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+..++..+|..+|. +++| .|+.++|..++....+... +..++..++..+|.+++|.|++++|+.++...
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 76 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence 45678999999999 9999 9999999999986326655 77788999999999999999999999887643
No 300
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=99.26 E-value=7.6e-12 Score=70.98 Aligned_cols=71 Identities=21% Similarity=0.356 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhc----CC--CCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 6 TEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQ----DE--HPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 6 ~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~----~~--~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+.++..++.+|..+|.+ +|.|+.+||..++.... |. .++..++..++..+|.+++|.|+|+||+.++...
T Consensus 5 l~~~~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (100)
T 1psr_A 5 AERSIIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 456788999999999976 78999999999998731 33 5667789999999999999999999999988654
No 301
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=99.25 E-value=1.7e-11 Score=68.95 Aligned_cols=70 Identities=16% Similarity=0.364 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhc----CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQ----DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~----~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+.++..++.+|..+|. ++|.|+.++|..++.... |..++..++..++..+|.+++|.|+|+||+.++...
T Consensus 5 ~~~~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 5 EHAMETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4567889999999994 567999999999998621 456788899999999999999999999999988654
No 302
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=99.23 E-value=5.3e-11 Score=69.09 Aligned_cols=69 Identities=17% Similarity=0.276 Sum_probs=62.4
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 5 LTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 5 l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+++++.+++.++|..+|+ ++|.|+.++++.++... + ++.+++..+|...|.+++|.|+++||+..|...
T Consensus 27 it~ee~~~y~~iF~~lD~-~dG~Isg~elr~~~~~s-g--Lp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li 95 (121)
T 3fia_A 27 ITVEERAKHDQQFHSLKP-ISGFITGDQARNFFFQS-G--LPQPVLAQIWALADMNNDGRMDQVEFSIAMKLI 95 (121)
T ss_dssp CCHHHHHHHHHHHHHTCC-BTTBEEHHHHHHHHGGG-C--CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC-CCCeECHHHHHHHHHHc-C--CCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 678999999999999998 89999999999999876 4 568899999999999999999999998877543
No 303
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=99.20 E-value=3.2e-10 Score=74.26 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=78.8
Q ss_pred HHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc------------c-c
Q 032008 14 QEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM------------K-E 80 (149)
Q Consensus 14 ~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~------------~-~ 80 (149)
..+|+.+|.+++|.|+..+|..+|..+. .....+.++-+|+.+| +++|.|+.+|+..++.... + .
T Consensus 135 ~~lf~~FD~~~~G~I~f~ef~~aLs~l~-rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~ 212 (261)
T 1eg3_A 135 NWLLNVYDTGRTGRIRVLSFKTGIISLC-KAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGS 212 (261)
T ss_dssp HHHHHHHCTTCCSEEEHHHHHHHHHHTS-SSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCS
T ss_pred HHHHHHccCCCCceEeHHHHHHHHHHHc-CCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 4489999999999999999999999884 4445568999999999 9999999999988885421 1 1
Q ss_pred CcHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 81 NVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 81 ~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
...+.+..+|+.+| ++|.|+.+||.+.++.
T Consensus 213 ~~e~~v~~~F~~~d--~dg~It~~EFl~~~~~ 242 (261)
T 1eg3_A 213 NIEPSVRSCFQFAN--NKPEIEAALFLDWMRL 242 (261)
T ss_dssp CCHHHHHHHHHHTT--TCSCBCHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCC--CCCcCCHHHHHHHHHh
Confidence 23367899999996 7899999999999875
No 304
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.15 E-value=8.1e-11 Score=89.27 Aligned_cols=98 Identities=11% Similarity=0.183 Sum_probs=84.7
Q ss_pred HHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHHH
Q 032008 48 EEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG-ERLSDEETEQMI 126 (149)
Q Consensus 48 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~~ 126 (149)
..+..+|..+|.+++|.|+..+|...+.........+.+..+|..+|.+++|.|+++||..++.... .....+.+..+|
T Consensus 725 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~aF 804 (863)
T 1sjj_A 725 NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASF 804 (863)
T ss_dssp HHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4578899999999999999999999987765555668899999999999999999999999987753 234557889999
Q ss_pred HhhCcCCCCceeHHHHHHHH
Q 032008 127 READLDGDGLVSFEEFARMM 146 (149)
Q Consensus 127 ~~~d~~~~g~i~~~ef~~~l 146 (149)
..+ .+++|.|+.+||..++
T Consensus 805 ~~~-~d~~G~Is~~El~~~l 823 (863)
T 1sjj_A 805 KIL-AGDKNYITVDELRREL 823 (863)
T ss_dssp HGG-GTSSSEEEHHHHHHHS
T ss_pred HHH-hCCCCcCcHHHHHHHC
Confidence 999 8999999999998875
No 305
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=99.12 E-value=2.9e-10 Score=64.72 Aligned_cols=64 Identities=19% Similarity=0.330 Sum_probs=47.5
Q ss_pred HHHHHHhhhcCCCCCCccHHHHHHHHHH----hcCCCCCH-----------HHHHHHHhhccCCCCCcccHHHHHHHHH
Q 032008 12 EFQEAFCMIDKDSDGLITMKDLATVIQS----AQDEHPRK-----------EEVQEMISEVDFDGNGSIDFLEFLTIMG 75 (149)
Q Consensus 12 ~l~~~f~~~d~~~~g~i~~~e~~~~l~~----~~~~~~~~-----------~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 75 (149)
.+..+|..+|.+++|.|+.++|..++.. ..+..++. ..+..++..+|.+++|.|+++||+.++.
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 99 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 99 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence 3677899999999999999999998886 32443332 2366777777777778888888777654
No 306
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=98.88 E-value=5.1e-10 Score=67.10 Aligned_cols=62 Identities=24% Similarity=0.355 Sum_probs=54.6
Q ss_pred HHHHHHhhhhcCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDRD-QDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..+...|..+|.| ++|+|+..|+..+...+. ..+..+..++..+|.|++|.||++||+.++.
T Consensus 77 ~~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~--~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg 139 (151)
T 1sra_A 77 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHHHHCCTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred hHHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc--ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhC
Confidence 4688999999997 999999999998886543 5677899999999999999999999998864
No 307
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.86 E-value=1.5e-08 Score=54.02 Aligned_cols=57 Identities=14% Similarity=0.290 Sum_probs=49.5
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhcc-CC----CCCcccHHHHHHHHH
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVD-FD----GNGSIDFLEFLTIMG 75 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d-~~----~~g~i~~~ef~~~~~ 75 (149)
.+++...|+.+ ++++|+|+..+++. .++.+++..+++.++ .+ ++|.|+|.+|+..+.
T Consensus 9 ~eel~eAFr~f-~dg~G~It~~eLr~--------~lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~ 70 (75)
T 1h8b_A 9 AEQVIASFRIL-ASDKPYILAEELRR--------ELPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 70 (75)
T ss_dssp HHHHHHHHHHH-TTSCSSBCHHHHHH--------HSCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCCcCHHHHHh--------cCCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHh
Confidence 46788899999 99999999999999 268899999999998 45 579999999988764
No 308
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.85 E-value=2.1e-08 Score=75.81 Aligned_cols=94 Identities=10% Similarity=0.216 Sum_probs=79.9
Q ss_pred HHHHHHHHhh--ccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCC-------CCCcccHHHHHHHHHHhCCCC
Q 032008 47 KEEVQEMISE--VDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRD-------QDGFISAAELRNVMMNLGERL 117 (149)
Q Consensus 47 ~~~~~~~~~~--~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~-------~~g~i~~~e~~~~l~~~~~~~ 117 (149)
...+++.|.. +|.+++|+|+..++...+.. ....+..+++.+|.+ ++|.|+.+||..++..+.
T Consensus 149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~--- 220 (885)
T 3ohm_B 149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLC--- 220 (885)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHS---
T ss_pred HHHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcC---
Confidence 4457778877 79999999999998887764 246788889999887 789999999999999875
Q ss_pred CHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 118 SDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 118 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
...++..+|..++.+++|.||.+||.++|..
T Consensus 221 ~R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~ 251 (885)
T 3ohm_B 221 LRPDIDKILLEIGAKGKPYLTLEQLMDFINQ 251 (885)
T ss_dssp CCHHHHHHHHHTTCCSTTCEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCccCHHHHHHHHHH
Confidence 3568999999999999999999999999864
No 309
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=98.84 E-value=2.2e-10 Score=67.30 Aligned_cols=84 Identities=17% Similarity=0.289 Sum_probs=50.1
Q ss_pred CCCccHHHHHH-----HHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCC
Q 032008 25 DGLITMKDLAT-----VIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDG 99 (149)
Q Consensus 25 ~g~i~~~e~~~-----~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g 99 (149)
+|.|+.++|.. ++...........++...|..+| |.|+.+++...+.... . +.+++..+++.+|.+++|
T Consensus 22 ~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG-~-t~~ei~~~~~~~D~d~dG 95 (123)
T 2kld_A 22 KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGKG-H-TDAEIEAIFTKYDQDGDQ 95 (123)
T ss_dssp -----------------------------CCSCSSTTTT----TCEEHHHHHHHTTTCC-S-SHHHHHHHHHHHSSSSCC
T ss_pred CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhC-C-CHHHHHHHHHHHcCCCCC
Confidence 78999999988 55543111222345667777776 9999999999886543 3 678899999999999999
Q ss_pred cccHHHHHHHHHHhC
Q 032008 100 FISAAELRNVMMNLG 114 (149)
Q Consensus 100 ~i~~~e~~~~l~~~~ 114 (149)
.|+.+||..++....
T Consensus 96 ~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 96 ELTEHEHQQMRDDLE 110 (123)
T ss_dssp EECSHHHHHCSCTTT
T ss_pred cCcHHHHHHHHHHHH
Confidence 999999998876543
No 310
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.84 E-value=3.5e-09 Score=79.51 Aligned_cols=94 Identities=9% Similarity=0.212 Sum_probs=72.9
Q ss_pred HHHHHHHHh--hccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcC-------CCCCcccHHHHHHHHHHhCCCC
Q 032008 47 KEEVQEMIS--EVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDR-------DQDGFISAAELRNVMMNLGERL 117 (149)
Q Consensus 47 ~~~~~~~~~--~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~-------~~~g~i~~~e~~~~l~~~~~~~ 117 (149)
...+++.|. .+|.+++|+|+..++...+.. ..+++..+++.+|. +++|.|+.+||..++..+.
T Consensus 145 ~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~--- 216 (799)
T 2zkm_X 145 STFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC--- 216 (799)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---
T ss_pred HHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc---
Confidence 456888898 789999999999999887754 24778888888884 7889999999999998864
Q ss_pred CHHHHHHHHHhhCcCCCCceeHHHHHHHHhc
Q 032008 118 SDEETEQMIREADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 118 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~ 148 (149)
..+++..+|..+|.+++|.||.+||.++|..
T Consensus 217 ~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~ 247 (799)
T 2zkm_X 217 PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQ 247 (799)
T ss_dssp CCHHHHTTCC--------CCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhccCCCCeEcHHHHHHHHHH
Confidence 4578999999999999999999999998864
No 311
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.54 E-value=1.2e-07 Score=71.24 Aligned_cols=87 Identities=9% Similarity=0.089 Sum_probs=71.3
Q ss_pred hccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhh-------cCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHh
Q 032008 56 EVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVF-------DRDQDGFISAAELRNVMMNLGERLSDEETEQMIRE 128 (149)
Q Consensus 56 ~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~-------D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~ 128 (149)
.++.+++|+|+..+....+.... ....++..+++.. |.+++|.|+.+||..++..+. ...++..+|..
T Consensus 163 ~fd~n~dG~Is~kEl~~~l~~~~--~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R~EI~eiF~~ 237 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCLSKDK--DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ERSEIEGIFKE 237 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHHCSCH--HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CCTHHHHHHHH
T ss_pred hccCCCCCCCCHHHHHHHHHhcC--ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHHHH
Confidence 47899999999999998776432 1124567777776 577889999999999999875 44589999999
Q ss_pred hCcCCCCceeHHHHHHHHhc
Q 032008 129 ADLDGDGLVSFEEFARMMMA 148 (149)
Q Consensus 129 ~d~~~~g~i~~~ef~~~l~~ 148 (149)
++.+++|.||. ||.++|..
T Consensus 238 y~~dg~~~mT~-eL~~FL~~ 256 (816)
T 3qr0_A 238 LSKNKGNITTV-MFRDFLND 256 (816)
T ss_dssp HTTTSSSEEHH-HHHHHHHH
T ss_pred HccCCCCcccH-HHHHHHHH
Confidence 99999999999 99999864
No 312
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=98.44 E-value=4.6e-07 Score=54.36 Aligned_cols=62 Identities=16% Similarity=0.194 Sum_probs=51.5
Q ss_pred HHHHHHHhhccCC-CCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 032008 48 EEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 48 ~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
..+.-.|..+|.+ ++|.|+..|+..++.... .....+..+|+.+|.|++|.||.+|+...+.
T Consensus 77 ~~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~--~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg 139 (151)
T 1sra_A 77 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHHHHCCTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred hHHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc--ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhC
Confidence 3677889999997 999999999988775443 3346789999999999999999999987765
No 313
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.44 E-value=7e-07 Score=51.52 Aligned_cols=54 Identities=2% Similarity=-0.014 Sum_probs=25.8
Q ss_pred CCCccHHHHHHHHHHhcCCC-CCHHHHHHHHhhccCCC--------CCcccHHHHHHHHHhhc
Q 032008 25 DGLITMKDLATVIQSAQDEH-PRKEEVQEMISEVDFDG--------NGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 25 ~g~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~~d~~~--------~g~i~~~ef~~~~~~~~ 78 (149)
+|.|+.++|+.++....-.. .+..-...+|..+|.++ +|.|++.||+..++...
T Consensus 45 ~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~~~~~~~~~~g~I~fkefi~~LSll~ 107 (118)
T 1tuz_A 45 GDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLE 107 (118)
T ss_dssp TTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhcccccccccCCCCeEeHHHHHHHHHHhc
Confidence 45555555555555543222 33334444555555442 45555555555554443
No 314
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.41 E-value=6.3e-07 Score=51.71 Aligned_cols=86 Identities=14% Similarity=0.272 Sum_probs=54.7
Q ss_pred CCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhcc------CCCCCcccHHHHHHHHHhhcccC-cH-HHHHHHhhhhcCC
Q 032008 25 DGLITMKDLATVIQSAQDEHPRKEEVQEMISEVD------FDGNGSIDFLEFLTIMGRKMKEN-VS-EELKEAFKVFDRD 96 (149)
Q Consensus 25 ~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d------~~~~g~i~~~ef~~~~~~~~~~~-~~-~~~~~~f~~~D~~ 96 (149)
.+.++.++|.++-... . .+..++..+++.+. ...+|.|+.++|..++....+.. .+ .-...+|+.+|.+
T Consensus 5 ~s~lspe~l~~L~~~t-~--fs~~elk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~ 81 (118)
T 1tuz_A 5 RGLISPSDFAQLQKYM-E--YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETG 81 (118)
T ss_dssp CSCSCHHHHHHHHHHH-H--HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCC
T ss_pred cCcCCHHHHHHHHHHc-c--cCHHHHHHHHHHHccccccccCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhcc
Confidence 4567777777765543 2 23445555555551 33467888888888887777654 44 4455588888876
Q ss_pred C--------CCcccHHHHHHHHHHh
Q 032008 97 Q--------DGFISAAELRNVMMNL 113 (149)
Q Consensus 97 ~--------~g~i~~~e~~~~l~~~ 113 (149)
+ +|.|+..|+.-.|.-+
T Consensus 82 ~~~~~~~~~~g~I~fkefi~~LSll 106 (118)
T 1tuz_A 82 HCLNETNVTKDVVCLNDVSCYFSLL 106 (118)
T ss_dssp CCTTCCCCCSCCEEHHHHHHHHHHH
T ss_pred cccccccCCCCeEeHHHHHHHHHHh
Confidence 4 6777777776666543
No 315
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=98.35 E-value=1.4e-07 Score=60.90 Aligned_cols=62 Identities=24% Similarity=0.349 Sum_probs=52.9
Q ss_pred HHHHHHhhhhcC-CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDR-DQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~-~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..+...|..+|. |++|.|+..|+..++..+. .....+..+++..|.|+||.||++||...+.
T Consensus 155 ~~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~--~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~ 217 (229)
T 1nub_A 155 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 217 (229)
T ss_dssp HHHHHHHHHHTTTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh--hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhC
Confidence 357889999999 8999999999999886432 2455789999999999999999999998764
No 316
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=97.83 E-value=5.5e-06 Score=53.50 Aligned_cols=62 Identities=16% Similarity=0.196 Sum_probs=43.1
Q ss_pred HHHHHHhhccC-CCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 49 EVQEMISEVDF-DGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 49 ~~~~~~~~~d~-~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
.+.-+|..+|. +++|.|+..|+..++..+.. ....+..+|+..|.|++|.||.+|+...+..
T Consensus 156 ~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~~--~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~~ 218 (229)
T 1nub_A 156 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIP--MEHCTTRFFETCDLDNDKYIALDEWAGCFGI 218 (229)
T ss_dssp HHHHHHHHHTTTTCSSEECTTTTGGGGSTTST--TGGGHHHHHHHHCTTCSSCEEHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhh--HHHHHHHHHHHcCCCCCCcCCHHHHHHHhCC
Confidence 35567777787 67888888887776643321 2244677788888888888888888776653
No 317
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=97.82 E-value=0.00012 Score=53.35 Aligned_cols=62 Identities=24% Similarity=0.349 Sum_probs=55.9
Q ss_pred cHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCCCceeHHHHHHHH
Q 032008 82 VSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGDGLVSFEEFARMM 146 (149)
Q Consensus 82 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l 146 (149)
....+..+|..+|+. +|+|+-++.+.++...+ ++.+.+..+|...|.+++|.++.+||+-+|
T Consensus 456 ~~~~y~~~F~~~~~~-~g~i~g~~a~~~~~~s~--Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am 517 (550)
T 2qpt_A 456 DKSKYDEIFYNLAPA-DGKLSGSKAKTWMVGTK--LPNSVLGRIWKLSDVDRDGMLDDEEFALAS 517 (550)
T ss_dssp THHHHHHHHHHTCCS-SSEECHHHHHHHHHHTT--CCHHHHHHHHHHHCSSCSSSEEHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-CCeecHHHHHHHHHHcC--CCHHHHHHHhcccCCCCCCcCCHHHHHHHH
Confidence 447899999999965 59999999999999776 789999999999999999999999998765
No 318
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=97.32 E-value=0.00072 Score=49.24 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHh
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGR 76 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 76 (149)
+.+..++..+|..+|+. +|.|+-.+.+.++... .++...+..+|...|.+++|.++.+||.-.|..
T Consensus 454 ~~~~~~y~~~F~~~~~~-~g~i~g~~a~~~~~~s---~Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~L 519 (550)
T 2qpt_A 454 TKDKSKYDEIFYNLAPA-DGKLSGSKAKTWMVGT---KLPNSVLGRIWKLSDVDRDGMLDDEEFALASHL 519 (550)
T ss_dssp TTTHHHHHHHHHHTCCS-SSEECHHHHHHHHHHT---TCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC-CCeecHHHHHHHHHHc---CCCHHHHHHHhcccCCCCCCcCCHHHHHHHHHH
Confidence 44788999999999964 5999999999999866 467889999999999999999999999877643
No 319
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=97.16 E-value=0.0083 Score=34.72 Aligned_cols=71 Identities=13% Similarity=0.096 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhc---CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQ---DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
..++++.-..|..+-.-+...|+-..|..+++... |-.++..++.-+|.++ ..+..+|+|++|...+..+.
T Consensus 21 ~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~lA 94 (125)
T 1pul_A 21 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFVA 94 (125)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHHH
Confidence 34455555555555444457899999999999883 2346888999999999 77778899999988886543
No 320
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=96.98 E-value=0.0023 Score=39.06 Aligned_cols=89 Identities=17% Similarity=0.314 Sum_probs=62.1
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCC-----CCHHHHHHHHhhcc--CCCCCcccHHHHHHHHHh
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEH-----PRKEEVQEMISEVD--FDGNGSIDFLEFLTIMGR 76 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~-----~~~~~~~~~~~~~d--~~~~g~i~~~ef~~~~~~ 76 (149)
.+++.++..+.++|..+|++++|.|...++..++..+ ..+ ++... +..++ ...+|+|.+.+.+..+..
T Consensus 13 ~L~~~dl~~F~~~W~~fDP~ATgfI~~~~L~~~l~~L-~pPLg~~kPn~~~----L~~mdiPl~~~~~Vhf~dvL~ALtk 87 (168)
T 4dck_A 13 PLSEDDFDMFYEIWEKFDPEATQFIEYSVLSDFADAL-SEPLRIAKPNQIS----LINMDLPMVSGDRIHCMDILFAFTK 87 (168)
T ss_dssp CBCHHHHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHS-CTTTCCCSSCHHH----HHHSCCEEETTTEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCcceeeHHHHHHHHHhc-CCCCcCCCCCHHH----HHHcCCCcCCCCEEeHHHHHHHHHH
Confidence 5899999999999999999999999999999999888 332 23222 23343 356789999888776644
Q ss_pred hcccCcH------HHHHHHhhhhcCCC
Q 032008 77 KMKENVS------EELKEAFKVFDRDQ 97 (149)
Q Consensus 77 ~~~~~~~------~~~~~~f~~~D~~~ 97 (149)
....... +.++..|...-+.+
T Consensus 88 ~vlg~~~~~~~~~~~~e~~~~~~~P~~ 114 (168)
T 4dck_A 88 RVLGESGEMDALKIQMEEKFMAANPSK 114 (168)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHCCCG
T ss_pred HHhCCcccHHHHHHHHHHHHHHhCCCc
Confidence 4333221 34555566655554
No 321
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=96.93 E-value=0.00082 Score=39.27 Aligned_cols=37 Identities=24% Similarity=0.406 Sum_probs=34.5
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 032008 4 ALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSA 40 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~ 40 (149)
.+++.+++.+.++|.++|++++|+|+..++..++..+
T Consensus 36 ~l~~~dl~~F~~~W~~fDP~aTg~I~~~~L~~ll~~L 72 (129)
T 2kav_A 36 PLSEDDFEMFYEVWEKFDPDATQFIEFAKLSDFADAL 72 (129)
T ss_dssp SSCHHHHHHHHHHHHHHCTTCCCEECGGGHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHhcCCCCceEEeHHHHHHHHHhC
Confidence 4789999999999999999999999999999999888
No 322
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=96.63 E-value=0.056 Score=34.06 Aligned_cols=66 Identities=9% Similarity=0.096 Sum_probs=53.2
Q ss_pred HHHHHHHhhhc-CCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 11 AEFQEAFCMID-KDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 11 ~~l~~~f~~~d-~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+++.++|..|- ++..+.|..+.+.+++..+ |+.+..-.+-.+-..+....-|.++.++|+..+...
T Consensus 4 ~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DL-gv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l 70 (200)
T 3tdu_A 4 KKLEQLYNRYKDPQDENKIGIDGIQQFCDDL-ALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTEL 70 (200)
T ss_dssp HHHHHHHHHHEETTEEEEECHHHHHHHHHHH-TCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-CCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHH
Confidence 46777888884 4434789999999999999 998887777677777777778999999999888664
No 323
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=96.45 E-value=0.043 Score=31.77 Aligned_cols=48 Identities=8% Similarity=0.184 Sum_probs=25.8
Q ss_pred CcccHHHHHHHHHHhC----CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 99 GFISAAELRNVMMNLG----ERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 99 g~i~~~e~~~~l~~~~----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
..|+-..|..+++..+ -.++.-.+.-+|..+ ..+..+|+|++|..+|.
T Consensus 40 ~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~ 91 (125)
T 1pul_A 40 TEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLA 91 (125)
T ss_dssp SCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHH
Confidence 3455555555555542 335555566666666 44445566666655543
No 324
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=96.21 E-value=0.027 Score=34.88 Aligned_cols=67 Identities=16% Similarity=0.221 Sum_probs=50.8
Q ss_pred HHHHHHhhhcCCCC-----CCccHHHHHHHHHHhc---CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 12 EFQEAFCMIDKDSD-----GLITMKDLATVIQSAQ---DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 12 ~l~~~f~~~d~~~~-----g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
.|..+|..|..-++ ..|+-..|..+|+.+. |..++..++.-+|.++...+..+|+|++|+..+..+.
T Consensus 9 ~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL~~lA 83 (184)
T 2jrf_A 9 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALEELA 83 (184)
T ss_dssp HHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhheeccCcceeecHHHHHHHHHHHH
Confidence 45556666654322 4699999999999983 2456888999999998777788899999998886543
No 325
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=96.21 E-value=0.018 Score=34.56 Aligned_cols=67 Identities=16% Similarity=0.233 Sum_probs=50.3
Q ss_pred HHHHHHhhhcCCCC-----CCccHHHHHHHHHHhc---CCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhc
Q 032008 12 EFQEAFCMIDKDSD-----GLITMKDLATVIQSAQ---DEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKM 78 (149)
Q Consensus 12 ~l~~~f~~~d~~~~-----g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 78 (149)
.|..+|..|..-++ ..|+-..|..+|+... +..++..++.-+|.++...+..+|+|++|+..+..+.
T Consensus 16 ~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~lA 90 (151)
T 1wlm_A 16 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELA 90 (151)
T ss_dssp SHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHTH
T ss_pred HHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccCccceecHHHHHHHHHHHH
Confidence 45556666654322 4689999999999983 2346888999999998777788899999998886543
No 326
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=95.90 E-value=0.039 Score=34.78 Aligned_cols=83 Identities=12% Similarity=0.057 Sum_probs=50.8
Q ss_pred CHHHHHHHHhhccCC-CCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHH
Q 032008 46 RKEEVQEMISEVDFD-GNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQ 124 (149)
Q Consensus 46 ~~~~~~~~~~~~d~~-~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~ 124 (149)
+...+..+|..+... +.+.|..+-...++..+.-.+..-.+--+-..+....-|.+|.+||...+..++... -+.++.
T Consensus 2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~ds-i~~lk~ 80 (200)
T 3tdu_A 2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDS-IEKLKA 80 (200)
T ss_dssp CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHTCSS-HHHHHH
T ss_pred CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHcccc-HHHHHH
Confidence 356677888887533 246788888888886654443332233333334445578899999988888887653 333444
Q ss_pred HHHhh
Q 032008 125 MIREA 129 (149)
Q Consensus 125 ~~~~~ 129 (149)
.+..+
T Consensus 81 ~l~~l 85 (200)
T 3tdu_A 81 QIPKM 85 (200)
T ss_dssp THHHH
T ss_pred HHHHH
Confidence 44433
No 327
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=95.87 E-value=0.084 Score=31.68 Aligned_cols=48 Identities=6% Similarity=0.256 Sum_probs=26.9
Q ss_pred cccHHHHHHHHHHhC----CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHHh
Q 032008 100 FISAAELRNVMMNLG----ERLSDEETEQMIREADLDGDGLVSFEEFARMMM 147 (149)
Q Consensus 100 ~i~~~e~~~~l~~~~----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~ 147 (149)
.|+-..|..+++..+ ..++...+..+|..+-.....+|+|++|..+|.
T Consensus 36 ~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~ 87 (151)
T 1wlm_A 36 EMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALE 87 (151)
T ss_dssp EEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHH
T ss_pred cCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccCccceecHHHHHHHHH
Confidence 355666666666542 335555666666665444445566666665553
No 328
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=95.86 E-value=0.083 Score=31.63 Aligned_cols=79 Identities=20% Similarity=0.196 Sum_probs=54.1
Q ss_pred HHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC-CCCCHHHHHHH
Q 032008 47 KEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG-ERLSDEETEQM 125 (149)
Q Consensus 47 ~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~~~ 125 (149)
-+.++.++..+|.+.+|.|+..|=..+++..+.......-.. .++ .++..||.+|+.+.+.... ..-+.+++...
T Consensus 14 ~eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~~k~~---~~h-~~D~~Isv~eLw~~W~~s~V~nWTvedV~~W 89 (150)
T 2l5y_A 14 LEALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNKHS---HLH-REDKHITIEDLWKRWKTSEVHNWTLEDTLQW 89 (150)
T ss_dssp HHHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSHHHHH---HHT-TTCCCBCHHHHHHHHHTSHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCchhHHh---hhc-CCCCeeeHHHHHHHHccCcchhCCHHHHHHH
Confidence 455788888889999999999988888877665433333222 233 2457899999988877543 24567777777
Q ss_pred HHhh
Q 032008 126 IREA 129 (149)
Q Consensus 126 ~~~~ 129 (149)
+...
T Consensus 90 L~~~ 93 (150)
T 2l5y_A 90 LIEF 93 (150)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6653
No 329
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=95.83 E-value=0.085 Score=32.68 Aligned_cols=46 Identities=7% Similarity=0.289 Sum_probs=23.3
Q ss_pred ccHHHHHHHHHHhC----CCCCHHHHHHHHHhhCcCCCCceeHHHHHHHH
Q 032008 101 ISAAELRNVMMNLG----ERLSDEETEQMIREADLDGDGLVSFEEFARMM 146 (149)
Q Consensus 101 i~~~e~~~~l~~~~----~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l 146 (149)
|+-..|..+++..+ ..++...+..+|..+-.....+|+|++|..+|
T Consensus 30 Md~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL 79 (184)
T 2jrf_A 30 MNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKAL 79 (184)
T ss_dssp EEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCccCCCCChhhcchhhheeccCcceeecHHHHHHHH
Confidence 55555555555442 33445555555555543444455555555544
No 330
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=95.80 E-value=0.1 Score=32.85 Aligned_cols=84 Identities=12% Similarity=0.046 Sum_probs=55.5
Q ss_pred CCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcH-HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHH
Q 032008 44 HPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVS-EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEET 122 (149)
Q Consensus 44 ~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~-~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~ 122 (149)
..+...+..+|..+....+..|..+-...++..+.-.+.. ..+.-++ .+....-|.+|++||...+..+|... -+.+
T Consensus 3 ~~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw-~l~a~~~g~ftr~ef~~G~~~l~~ds-i~~l 80 (199)
T 3kev_A 3 RADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAW-KLKASSTCEFSEKEFVEGLANLQVDS-LEKL 80 (199)
T ss_dssp -CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHH-HTTCCSTTCEEHHHHHHHHHHTTCCS-HHHH
T ss_pred ccCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHH-HcCCCccCcccHHHHHHHHHHhCCCC-HHHH
Confidence 3567788899988865444489999988888766544433 3333333 35556678999999999999988653 3344
Q ss_pred HHHHHhh
Q 032008 123 EQMIREA 129 (149)
Q Consensus 123 ~~~~~~~ 129 (149)
+..+..+
T Consensus 81 k~~l~~l 87 (199)
T 3kev_A 81 KRKLSSL 87 (199)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 331
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=95.51 E-value=0.24 Score=31.20 Aligned_cols=66 Identities=11% Similarity=0.102 Sum_probs=51.5
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
+++.++|..|-...+..|..+.+.+++..+ |+.+..-.+-.+-..+....-|.++.++|+..+...
T Consensus 7 ~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DL-gv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l 72 (199)
T 3kev_A 7 KAILELFQTYKEPLGNYIGAEGLQRLFEDI-QVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANL 72 (199)
T ss_dssp HHHHHHHHHHCCTTSSEECHHHHHHHHHHT-TCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCcCccCHHHHHHHHHHc-CCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHh
Confidence 456667777743233499999999999999 898887766666667777778999999999888654
No 332
>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*
Probab=95.49 E-value=0.33 Score=32.66 Aligned_cols=102 Identities=11% Similarity=0.061 Sum_probs=73.1
Q ss_pred CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHH
Q 032008 43 EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEET 122 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~ 122 (149)
..++..+.+..|...-.... .|.|.+|...+....+..........=..+|.-.+++||..||..+++-+|.= + ..
T Consensus 157 frItK~~A~eFW~~~FG~r~-iVpW~~F~~~L~~~~~i~sg~~~laLK~tiDlT~~d~VSifeFdvFtr~FqPw-~--~l 232 (329)
T 3bux_B 157 FRITKADAAEFWRKAFGEKT-IVPWKSFRQALHEVHPISSGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPW-S--SL 232 (329)
T ss_dssp CCCSSHHHHHHHHHHHTTCS-EEEHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTCCG-G--GH
T ss_pred eeecChHHHHHHHHhCCCCc-CCcHHHHHHHHHHhCCCCCCchhhhhhheeCCCcCCceeeeecccHHHhhCch-H--HH
Confidence 34566777777776543333 38999999999887666555333333347899999999999999999987632 1 23
Q ss_pred HHHHHhhCcCCCC---ceeHHHHHHHHhc
Q 032008 123 EQMIREADLDGDG---LVSFEEFARMMMA 148 (149)
Q Consensus 123 ~~~~~~~d~~~~g---~i~~~ef~~~l~~ 148 (149)
-..|+.+.....| .+||+|-.+.|..
T Consensus 233 l~nw~~la~~hpGy~aFlTydEv~~~L~~ 261 (329)
T 3bux_B 233 LRNWNSLAVTHPGYMAFLTYDEVKARLQK 261 (329)
T ss_dssp HHHHHHHTTSCTTBCTTCCHHHHHHHHGG
T ss_pred HHHHHHHHhcCcchhheeeHHHHHHHHHH
Confidence 4445556778888 8999999888865
No 333
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=95.48 E-value=0.31 Score=32.26 Aligned_cols=134 Identities=12% Similarity=0.081 Sum_probs=83.7
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCC-CcccHHHHHHHHHhhcccCcH-----
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGN-GSIDFLEFLTIMGRKMKENVS----- 83 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~-g~i~~~ef~~~~~~~~~~~~~----- 83 (149)
.+++..+|..|- ..+.|..+.+.+++..+ |+.+..-.+-.+-..+....- |.++.++|+..+.........
T Consensus 73 ~~~l~~lF~~Y~--~~d~I~~dG~~~~~~DL-gv~ped~~~Lvla~~l~a~~~~g~ftr~ef~~G~~~l~~dsi~~lk~~ 149 (270)
T 3bq3_A 73 PKELTQVFEHYI--NNNLFDIDSLVKFIEEL-GYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWFMQGCSTISDMQEC 149 (270)
T ss_dssp CHHHHHHHHHHC--BTTBCCHHHHHHHHHHH-TCCTTCHHHHHHHHHTTCSCTTSCCCHHHHHHHHHHTTCCSHHHHHHH
T ss_pred HHHHHHHHHHhc--CCCccCHhhHHHHHHHc-CCChhhHHHHHHHHHcCCCccCceeeHHHHHHHHHHhCCCCHHHHHHH
Confidence 356777888885 55799999999999999 998877666666666766666 999999999887554322211
Q ss_pred ----------------HHHHHHhhhhcCCCCCcccHHHHHHHHHHhC-CC----CCHHHHHHHHHhhCcCCCCceeHHHH
Q 032008 84 ----------------EELKEAFKVFDRDQDGFISAAELRNVMMNLG-ER----LSDEETEQMIREADLDGDGLVSFEEF 142 (149)
Q Consensus 84 ----------------~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~-~~----~~~~~~~~~~~~~d~~~~g~i~~~ef 142 (149)
.-+..+|...-..+...++.+--..+++-+- .+ .+...+...++-+.......|+.+.+
T Consensus 150 l~~l~~~~~~d~~~Fk~~Y~f~F~~~r~~gqk~l~~d~Ai~~W~lll~~~~p~~~~~~~l~~W~~FL~~~~~k~IskDtW 229 (270)
T 3bq3_A 150 IKTLDVKLHEDLQYFTQIYNYAFNLILDPNRKDIDTDEGIQYWKLFFQPEYPVRMEPDLLEAWFRFLRDEGKTTISKDTW 229 (270)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHCCTTCSEEEHHHHHHHHHHHTSTTSSCCCCHHHHHHHHHHHHHHTCCEEEHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHhcCcCcCcCcHHHHHHHHHHHcCCcccccccchHHHHHHHHHHhcCCCCcCHHHH
Confidence 1233345444334556677776666666542 11 12234444444333334456776666
Q ss_pred HHHH
Q 032008 143 ARMM 146 (149)
Q Consensus 143 ~~~l 146 (149)
..++
T Consensus 230 ~~~l 233 (270)
T 3bq3_A 230 RMLL 233 (270)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 334
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=95.32 E-value=0.3 Score=31.24 Aligned_cols=67 Identities=10% Similarity=0.061 Sum_probs=53.2
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK 77 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 77 (149)
.+++.++|..|-......|..+.+.+++..+ |+.+..-.+-.+-..+....-|.++.++|+..+...
T Consensus 5 ~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DL-gv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l 71 (221)
T 4gba_A 5 LQRLEELFRRYKDEREDAILEEGMERFCNDL-CVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAI 71 (221)
T ss_dssp -CHHHHHHHTTSCSSSSEECHHHHHHHHHHT-TCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHHc-CCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHh
Confidence 3467788988854455689999999999999 898887666666667777778999999999887654
No 335
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=95.12 E-value=0.17 Score=32.37 Aligned_cols=72 Identities=8% Similarity=-0.007 Sum_probs=48.9
Q ss_pred CHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcH-HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCC
Q 032008 46 RKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVS-EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLS 118 (149)
Q Consensus 46 ~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~-~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~ 118 (149)
+...+..+|..+.......|..+-...++..+.-.+.. ..+.-++ .+....-|.+|+++|...+..++....
T Consensus 4 ~~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw-~l~A~~mg~ftr~eF~~G~~~l~~dsi 76 (221)
T 4gba_A 4 SLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAW-KFQAATMCKFTRKEFFDGCKAISADSI 76 (221)
T ss_dssp --CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHH-HTTCCSTTCEEHHHHHHHHHHHTCSSH
T ss_pred CHHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHH-HhCCCccCcCcHHHHHHHHHHhCcCCH
Confidence 44568888888865556789888888888766544433 3333333 344556689999999999999887543
No 336
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=95.07 E-value=0.069 Score=28.94 Aligned_cols=54 Identities=15% Similarity=0.215 Sum_probs=25.0
Q ss_pred cCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 032008 58 DFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 58 d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
|.+++|.|+-.++..+...............-....|.|++|.|+..++..+-+
T Consensus 24 DvNgDG~Vn~~D~~llk~yllg~~~~~~~~~~~~aADvNgDG~In~~D~~~lkk 77 (88)
T 4fl4_A 24 DVNDDGKVNSTDLTLLKRYVLKAVSTLPSSKAEKNADVNRDGRVNSSDVTILSR 77 (88)
T ss_dssp CTTCSSCCSHHHHHHHHHHHHTSSCCCSSHHHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHcCCCCCCchhhhhhhccccCCCCcCHHHHHHHHH
Confidence 445566666666554443333222110001223455666666666666544433
No 337
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=94.62 E-value=0.03 Score=32.69 Aligned_cols=63 Identities=22% Similarity=0.264 Sum_probs=42.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCC--CHHHHHHHHHhhCc--CCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERL--SDEETEQMIREADL--DGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~--~~~~~~~~~~~~d~--~~~g~i~~~ef~~~l~ 147 (149)
+.+.++|..+|++++|+|+..++..++..+...+ ....-.. +-.++. ..+++|-+-+.+..|.
T Consensus 43 ~~F~~~W~~fDP~aTg~I~~~~L~~ll~~L~pPLgi~kpnr~~-L~~mniPl~~g~~Vhf~dvL~ALt 109 (129)
T 2kav_A 43 EMFYEVWEKFDPDATQFIEFAKLSDFADALDPPLLIAKPNKVQ-LIAMDLPMVSGDRIHCLDILFAFT 109 (129)
T ss_dssp HHHHHHHHHHCTTCCCEECGGGHHHHHHHSCTTSCCCTTCCHH-HHHTCCCEETTTEEEHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEeHHHHHHHHHhCCccccCCCccHHH-HHHcCCccCCCCEEeHHHHHHHHH
Confidence 4566788999999999999999999999874221 1111111 334553 3456788888777664
No 338
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=94.53 E-value=0.043 Score=29.76 Aligned_cols=50 Identities=18% Similarity=0.247 Sum_probs=35.2
Q ss_pred hcCCCCCcccHHHHHHHHHHh-CC-CCCHHHHHHHHHhhCcCCCCceeHHHHHH
Q 032008 93 FDRDQDGFISAAELRNVMMNL-GE-RLSDEETEQMIREADLDGDGLVSFEEFAR 144 (149)
Q Consensus 93 ~D~~~~g~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~~ 144 (149)
=|.|++|.|+..++.-+.+.+ +. ...+ ...-+...|.|++|.|+-.++..
T Consensus 23 GDvNgDG~Vn~~D~~llk~yllg~~~~~~--~~~~~~aADvNgDG~In~~D~~~ 74 (88)
T 4fl4_A 23 GDVNDDGKVNSTDLTLLKRYVLKAVSTLP--SSKAEKNADVNRDGRVNSSDVTI 74 (88)
T ss_dssp TCTTCSSCCSHHHHHHHHHHHHTSSCCCS--SHHHHHHHCTTCSSCCSHHHHHH
T ss_pred ccCCCCCcCCHHHHHHHHHHHcCCCCCCc--hhhhhhhccccCCCCcCHHHHHH
Confidence 378999999999998776655 32 1211 01225678999999999988854
No 339
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=94.46 E-value=0.3 Score=29.21 Aligned_cols=60 Identities=13% Similarity=0.202 Sum_probs=43.7
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHH
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIM 74 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 74 (149)
.+.++.++..+|.+.+|.|+.+|-..+++.-.+..-.. .... .+ ..++..|+.+|+....
T Consensus 14 ~eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~-~k~~---~~-h~~D~~Isv~eLw~~W 73 (150)
T 2l5y_A 14 LEALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDAT-NKHS---HL-HREDKHITIEDLWKRW 73 (150)
T ss_dssp HHHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSH-HHHH---HH-TTTCCCBCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCch-hHHh---hh-cCCCCeeeHHHHHHHH
Confidence 45678889999999999999999999999885443333 2222 22 3457889998876644
No 340
>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}
Probab=94.09 E-value=0.83 Score=30.62 Aligned_cols=101 Identities=10% Similarity=0.069 Sum_probs=70.4
Q ss_pred CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHH
Q 032008 43 EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEET 122 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~ 122 (149)
+.++..+....|...-.. .-.|.+.+|...+....+.........+=..+|.-.+|+||..||..+.+-++. .+ .+
T Consensus 142 y~itk~~A~~FWk~~FG~-r~iVpW~~F~~~l~~~~~i~s~~~~~aLk~tiDlT~~~~VSifeFdvFtrlFqP-w~--~l 217 (323)
T 3op0_A 142 YQLTKAPAHTFWRESCGA-RCVLPWAEFESLLGTCHPVEPGATALALRTTIDLTCSGHVSIFEFDVFTRLFQP-WP--TL 217 (323)
T ss_dssp CCCSSHHHHHHHHHHHTT-CSEEEHHHHHHHHHTTSCCCTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTCC-GG--GH
T ss_pred eEEcChHHHHHHHHhcCC-CceecHHHHHHHHHHhcCCCCcchHHHHHHhcccccCCceeeeecchHHHhhCc-CH--HH
Confidence 456677777777655433 334999999999987766555444444557789999999999999999998764 22 12
Q ss_pred HHHHHhhCcCCC---CceeHHHHHHHHh
Q 032008 123 EQMIREADLDGD---GLVSFEEFARMMM 147 (149)
Q Consensus 123 ~~~~~~~d~~~~---g~i~~~ef~~~l~ 147 (149)
-.-|.....+.. |.|||+|-.+.|.
T Consensus 218 L~nw~~lav~hpGy~aFlTydEV~~~L~ 245 (323)
T 3op0_A 218 LKNWQLLAVNHPGYMAFLTYDEVQERLQ 245 (323)
T ss_dssp HHHHHHHTTTCTTBCTTCCHHHHHHHTT
T ss_pred hhhHHHHhhcCcceeeeeeHHHHHHHHH
Confidence 344555544554 5789999888776
No 341
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=93.67 E-value=0.05 Score=29.10 Aligned_cols=55 Identities=11% Similarity=0.175 Sum_probs=30.8
Q ss_pred cCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 58 DFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 58 d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
|.+++|.|+-.++.-+..........-....-....|.+++|.|+..++..+-+.
T Consensus 9 DvN~DG~Vn~~D~~llk~yllg~~~~~~~~~~~~~ADvngDG~In~~D~~~lk~y 63 (82)
T 4dh2_B 9 DVNADGVVNISDYVLMKRYILRIIADFPADDDMWVGDVNGDNVINDIDCNYLKRY 63 (82)
T ss_dssp CTTCSSSCSHHHHHHHHHHHTTSSSSCSSSCHHHHHCSSSSSCCSHHHHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCccCccccchhheeccCCCcCCHHHHHHHHHH
Confidence 5567777777777665554444321100011245667777777777777555443
No 342
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=93.61 E-value=0.095 Score=31.36 Aligned_cols=30 Identities=10% Similarity=0.338 Sum_probs=20.0
Q ss_pred HHHHHHHhhhcCCCCCCccHHHHHHHHHHh
Q 032008 11 AEFQEAFCMIDKDSDGLITMKDLATVIQSA 40 (149)
Q Consensus 11 ~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~ 40 (149)
+.++.++..+|.+.+|.|+..|-..+++.-
T Consensus 15 eAi~~lH~~lDdD~dG~Id~~Es~~flred 44 (150)
T 2k60_A 15 EAVRNIHKLMDDDANGDVDVEESDEFLRED 44 (150)
T ss_dssp HHHHHHHHTTCTTCSSEECTTTTTTHHHHH
T ss_pred HHHHHHHHhcCCCCCCcccHHHHHHHHHHH
Confidence 455666666777777777777766666655
No 343
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=93.59 E-value=0.091 Score=31.43 Aligned_cols=81 Identities=19% Similarity=0.178 Sum_probs=56.5
Q ss_pred CCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC-CCCCHHHHH
Q 032008 45 PRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG-ERLSDEETE 123 (149)
Q Consensus 45 ~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~-~~~~~~~~~ 123 (149)
++-+.++.++..+|.+.+|.|+..|=..+++.-+.......-...| .. ++..||.+|+...+..-. ..-+.+++.
T Consensus 12 ~~~eAi~~lH~~lDdD~dG~Id~~Es~~flredl~~~d~~~~~~~f---h~-~D~~Isv~eLw~~W~~s~V~nWTvedV~ 87 (150)
T 2k60_A 12 LSFEAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVKHSTF---HG-EDKLISVEDLWKAWKSSEVYNWTVDEVV 87 (150)
T ss_dssp CHHHHHHHHHHTTCTTCSSEECTTTTTTHHHHHTTSSCTHHHHHHH---TS-SSCCEEHHHHHHHHHHSHHHHCCHHHHH
T ss_pred hhhHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhccccchhhhhcc---cC-CCCeeeHHHHHHHhccCccccCCHHHHH
Confidence 4557788899999999999999888777777665544433333444 32 567999999999877643 235677776
Q ss_pred HHHHhh
Q 032008 124 QMIREA 129 (149)
Q Consensus 124 ~~~~~~ 129 (149)
..+...
T Consensus 88 ~WL~~~ 93 (150)
T 2k60_A 88 QWLITY 93 (150)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 666443
No 344
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=93.57 E-value=0.11 Score=27.75 Aligned_cols=54 Identities=13% Similarity=0.178 Sum_probs=30.2
Q ss_pred cCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHH
Q 032008 21 DKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMG 75 (149)
Q Consensus 21 d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 75 (149)
|.|++|.|+..++..+.+.+.+..... ....-....|.+++|.|+-.++..+-.
T Consensus 9 DvN~DG~Vn~~D~~llk~yllg~~~~~-~~~~~~~~ADvngDG~In~~D~~~lk~ 62 (82)
T 4dh2_B 9 DVNADGVVNISDYVLMKRYILRIIADF-PADDDMWVGDVNGDNVINDIDCNYLKR 62 (82)
T ss_dssp CTTCSSSCSHHHHHHHHHHHTTSSSSC-SSSCHHHHHCSSSSSCCSHHHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCccC-ccccchhheeccCCCcCCHHHHHHHHH
Confidence 567777777777777665553322110 001123456777777777777654443
No 345
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=93.36 E-value=0.54 Score=31.11 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=32.9
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcCCC-CceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLDGD-GLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~-g~i~~~ef~~~l~ 147 (149)
..+..+|..+- ..+.|..+.+.+++..+|....+-.+-.+.-.+....- |.+|.+||+.-+.
T Consensus 74 ~~l~~lF~~Y~--~~d~I~~dG~~~~~~DLgv~ped~~~Lvla~~l~a~~~~g~ftr~ef~~G~~ 136 (270)
T 3bq3_A 74 KELTQVFEHYI--NNNLFDIDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWF 136 (270)
T ss_dssp HHHHHHHHHHC--BTTBCCHHHHHHHHHHHTCCTTCHHHHHHHHHTTCSCTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhc--CCCccCHhhHHHHHHHcCCChhhHHHHHHHHHcCCCccCceeeHHHHHHHHH
Confidence 44555565553 34566666666666666655444333333333333333 6666666665543
No 346
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=92.58 E-value=0.5 Score=24.40 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=11.0
Q ss_pred hhhcCCCCCcccHHHHHHHHH
Q 032008 91 KVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 91 ~~~D~~~~g~i~~~e~~~~l~ 111 (149)
...|.+++|.|+..++..+-+
T Consensus 38 ~~aDvN~DG~in~~D~~~l~~ 58 (71)
T 2y3n_B 38 EKADLNNDGVINSDDAIILAQ 58 (71)
T ss_dssp CTTCTTCSSBCSHHHHHHHHH
T ss_pred ccccccCCCcccHHHHHHHHH
Confidence 445555555555555544433
No 347
>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}
Probab=92.21 E-value=0.42 Score=24.24 Aligned_cols=20 Identities=15% Similarity=0.300 Sum_probs=10.0
Q ss_pred cCCCCCCccHHHHHHHHHHh
Q 032008 21 DKDSDGLITMKDLATVIQSA 40 (149)
Q Consensus 21 d~~~~g~i~~~e~~~~l~~~ 40 (149)
|.|++|.++..++..+-+.+
T Consensus 7 DvN~DG~Vn~~D~~llk~yl 26 (65)
T 3ul4_B 7 DLNRNGIVNDEDYILLKNYL 26 (65)
T ss_dssp CTTCSSCCSHHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHH
Confidence 44555555555555444433
No 348
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=92.17 E-value=2.1 Score=29.90 Aligned_cols=102 Identities=10% Similarity=0.044 Sum_probs=71.4
Q ss_pred CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHH
Q 032008 43 EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEET 122 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~ 122 (149)
+.++..+.+..|...-.+. -.|.|.+|...+....+..........=..+|.-.+++|+..||-.+++-+|. -. .+
T Consensus 133 ~~i~k~~A~~fW~~~fg~~-~~v~W~~f~~~~~~~~~~~~~~~~~~lk~~~~~t~~~~vs~~~f~~f~~~f~p--~~-~l 208 (389)
T 2y1n_A 133 FRITKADAAEFWRKAFGEK-TIVPWKSFRQALHEVHPISSGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQP--WS-SL 208 (389)
T ss_dssp CCCSSHHHHHHHHHHHTTC-SEEEHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTCC--GG-GH
T ss_pred eEecChHHHHHHHHhCCCC-eeeeHHHHHHHHHHhcCCCCCchhhhHhhccCcccCCccchhhhchHHHHhcc--HH-HH
Confidence 4566677777777654333 33899999999987766655533344456678888999999999999988763 22 23
Q ss_pred HHHHHhhCcCCCC---ceeHHHHHHHHhc
Q 032008 123 EQMIREADLDGDG---LVSFEEFARMMMA 148 (149)
Q Consensus 123 ~~~~~~~d~~~~g---~i~~~ef~~~l~~ 148 (149)
...|.....+..| .++|+|..+.+..
T Consensus 209 ~~~~~~~~~~hpg~~af~ty~ev~~~Lk~ 237 (389)
T 2y1n_A 209 LRNWNSLAVTHPGYMAFLTYDEVKARLQK 237 (389)
T ss_dssp HHHHHHHTTSCTTBCTTCCHHHHHHHHGG
T ss_pred HHHHHHHHhcCCchhhcccHHHHHHHHHH
Confidence 3444447778888 8899888777654
No 349
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=91.68 E-value=0.62 Score=24.02 Aligned_cols=53 Identities=26% Similarity=0.373 Sum_probs=35.9
Q ss_pred cCCCCCCccHHHHHHHHHHh--cCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcc
Q 032008 21 DKDSDGLITMKDLATVIQSA--QDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMK 79 (149)
Q Consensus 21 d~~~~g~i~~~e~~~~l~~~--~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~ 79 (149)
|.|++|.++..++..+-+.+ .+... ... ...|.+++|+|+-.++..+-.....
T Consensus 8 DvN~DG~vn~~D~~~l~~yl~~lg~~~---~~~---~~aDvN~DG~in~~D~~~l~~~llg 62 (71)
T 2y3n_B 8 DLNGDGVINMADVMILAQSFGKAIGNP---GVN---EKADLNNDGVINSDDAIILAQYFGK 62 (71)
T ss_dssp CTTSSSBCSHHHHHHHHHTTTCBC------------CTTCTTCSSBCSHHHHHHHHHHTTC
T ss_pred cCCCCCcCCHHHHHHHHHHHHHhCCCc---CCC---ccccccCCCcccHHHHHHHHHHHcC
Confidence 67899999999988765443 12211 112 6789999999999998766554443
No 350
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=91.45 E-value=0.16 Score=31.00 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=40.4
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCC--C-HHHHHHHHHhhCc--CCCCceeHHHHHHHHh
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERL--S-DEETEQMIREADL--DGDGLVSFEEFARMMM 147 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~--~-~~~~~~~~~~~d~--~~~g~i~~~ef~~~l~ 147 (149)
+.+..+|..||++++|+|...++..++..+...+ . +.. ..+..+|. ..+|.|-+-+-+..|.
T Consensus 20 ~~F~~~W~~fDP~ATgfI~~~~L~~~l~~L~pPLg~~kPn~--~~L~~mdiPl~~~~~Vhf~dvL~ALt 86 (168)
T 4dck_A 20 DMFYEIWEKFDPEATQFIEYSVLSDFADALSEPLRIAKPNQ--ISLINMDLPMVSGDRIHCMDILFAFT 86 (168)
T ss_dssp HHHHHHHHHHCTTCCSEEEGGGHHHHHHHSCTTTCCCSSCH--HHHHHSCCEEETTTEEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcceeeHHHHHHHHHhcCCCCcCCCCCH--HHHHHcCCCcCCCCEEeHHHHHHHHH
Confidence 4566778889999999999999999998863221 1 111 12345543 4467787777666554
No 351
>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}
Probab=91.43 E-value=0.57 Score=23.74 Aligned_cols=51 Identities=16% Similarity=0.289 Sum_probs=30.1
Q ss_pred cCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHH
Q 032008 58 DFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMM 111 (149)
Q Consensus 58 d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~ 111 (149)
|.+++|.|+-.++.-+........... .. ....|.+++|.|+..++..+-+
T Consensus 7 DvN~DG~Vn~~D~~llk~yllg~~~~~--~~-~~~ADvn~DG~In~~D~~~lk~ 57 (65)
T 3ul4_B 7 DLNRNGIVNDEDYILLKNYLLRGNKLV--ID-LNVADVNKDGKVNSTDCLFLKK 57 (65)
T ss_dssp CTTCSSCCSHHHHHHHHHHHTTCSSCC--CC-GGGCCTTCSSCCSHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHCCCCCCc--hH-HHhccccCCCCCCHHHHHHHHH
Confidence 456777777777765554444432110 11 4566777777777777755444
No 352
>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}
Probab=90.82 E-value=2.6 Score=28.33 Aligned_cols=82 Identities=10% Similarity=0.244 Sum_probs=58.2
Q ss_pred CccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhh---cCCCCCcccH
Q 032008 27 LITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVF---DRDQDGFISA 103 (149)
Q Consensus 27 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~---D~~~~g~i~~ 103 (149)
.|+.++|...+....+.... .+...+-..+|...++.|+.-+|-.+....-+-.. +-..+..+ -+.--|.||.
T Consensus 162 iVpW~~F~~~l~~~~~i~s~-~~~~aLk~tiDlT~~~~VSifeFdvFtrlFqPw~~---lL~nw~~lav~hpGy~aFlTy 237 (323)
T 3op0_A 162 VLPWAEFESLLGTCHPVEPG-ATALALRTTIDLTCSGHVSIFEFDVFTRLFQPWPT---LLKNWQLLAVNHPGYMAFLTY 237 (323)
T ss_dssp EEEHHHHHHHHHTTSCCCTT-HHHHHHHHHHCTTCSSEEEHHHHHHHHHHTCCGGG---HHHHHHHHTTTCTTBCTTCCH
T ss_pred eecHHHHHHHHHHhcCCCCc-chHHHHHHhcccccCCceeeeecchHHHhhCcCHH---HhhhHHHHhhcCcceeeeeeH
Confidence 58999999999987444444 34555667788899999999999988876644332 23333333 2334567999
Q ss_pred HHHHHHHHH
Q 032008 104 AELRNVMMN 112 (149)
Q Consensus 104 ~e~~~~l~~ 112 (149)
+|+.+.|..
T Consensus 238 dEV~~~L~~ 246 (323)
T 3op0_A 238 DEVQERLQA 246 (323)
T ss_dssp HHHHHHTTG
T ss_pred HHHHHHHHH
Confidence 999999984
No 353
>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B
Probab=90.74 E-value=0.89 Score=22.85 Aligned_cols=45 Identities=13% Similarity=0.242 Sum_probs=20.3
Q ss_pred cCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHH
Q 032008 21 DKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71 (149)
Q Consensus 21 d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~ 71 (149)
|.|++|.++..++..+-+.+.+...... ...|.+++|.|+-.+|.
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~~------~~aDvn~DG~in~~D~~ 50 (64)
T 2vn6_B 6 DYNNDGNVDSTDFAGLKKYIMAADHAYV------KNLDVNLDNEVNAFDLA 50 (64)
T ss_dssp CTTSSSCCSHHHHHHHHHHHHSTTCCCC------GGGCTTCSSCCSHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHccCCccch------hhhcccCCCcccHHHHH
Confidence 4455666665555443332222211110 34455555555555554
No 354
>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*
Probab=90.19 E-value=3.1 Score=28.13 Aligned_cols=82 Identities=15% Similarity=0.218 Sum_probs=60.6
Q ss_pred CccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCC---cccH
Q 032008 27 LITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDG---FISA 103 (149)
Q Consensus 27 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g---~i~~ 103 (149)
.|+..+|...+....+.. +..+...+-..+|...++.|+.-+|-.+.....+-.. ....|..+-..+.| .+|.
T Consensus 177 iVpW~~F~~~L~~~~~i~-sg~~~laLK~tiDlT~~d~VSifeFdvFtr~FqPw~~---ll~nw~~la~~hpGy~aFlTy 252 (329)
T 3bux_B 177 IVPWKSFRQALHEVHPIS-SGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWSS---LLRNWNSLAVTHPGYMAFLTY 252 (329)
T ss_dssp EEEHHHHHHHHHHHSCCC-CHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTCCGGG---HHHHHHHHTTSCTTBCTTCCH
T ss_pred CCcHHHHHHHHHHhCCCC-CCchhhhhhheeCCCcCCceeeeecccHHHhhCchHH---HHHHHHHHHhcCcchhheeeH
Confidence 489999999999883443 3444555556788899999999999988876644433 33444445666777 8999
Q ss_pred HHHHHHHHH
Q 032008 104 AELRNVMMN 112 (149)
Q Consensus 104 ~e~~~~l~~ 112 (149)
+|+.+.|..
T Consensus 253 dEv~~~L~~ 261 (329)
T 3bux_B 253 DEVKARLQK 261 (329)
T ss_dssp HHHHHHHGG
T ss_pred HHHHHHHHH
Confidence 999999986
No 355
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=90.16 E-value=1 Score=22.54 Aligned_cols=13 Identities=46% Similarity=0.746 Sum_probs=5.0
Q ss_pred cCCCCCcccHHHH
Q 032008 94 DRDQDGFISAAEL 106 (149)
Q Consensus 94 D~~~~g~i~~~e~ 106 (149)
|.+++|.|+..++
T Consensus 40 Dvn~DG~in~~D~ 52 (63)
T 2ccl_B 40 DVDKNGSINAADV 52 (63)
T ss_dssp CTTCSSCCSHHHH
T ss_pred ccCCCCCccHHHH
Confidence 3333333333333
No 356
>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B
Probab=89.03 E-value=1.3 Score=22.23 Aligned_cols=50 Identities=20% Similarity=0.286 Sum_probs=28.3
Q ss_pred cCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 58 DFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 58 d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
|.+++|.|+-.++..+-........... ...|.+++|.|+..++..+-+.
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~~-----~~aDvn~DG~in~~D~~~l~~~ 55 (64)
T 2vn6_B 6 DYNNDGNVDSTDFAGLKKYIMAADHAYV-----KNLDVNLDNEVNAFDLAILKKY 55 (64)
T ss_dssp CTTSSSCCSHHHHHHHHHHHHSTTCCCC-----GGGCTTCSSCCSHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHccCCccch-----hhhcccCCCcccHHHHHHHHHH
Confidence 4567777777776544333322211100 5667777777777777554443
No 357
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=87.82 E-value=1.6 Score=21.79 Aligned_cols=52 Identities=27% Similarity=0.364 Sum_probs=36.7
Q ss_pred cCCCCCCccHHHHHHHHHHhcCCCC-CHHHHHHHHhhccCCCCCcccHHHHHHHHHh
Q 032008 21 DKDSDGLITMKDLATVIQSAQDEHP-RKEEVQEMISEVDFDGNGSIDFLEFLTIMGR 76 (149)
Q Consensus 21 d~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 76 (149)
|.|++|.++..++..+-+.+.+... +.. -+...|.+++|+|+-.+|..+-..
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~~~----~~~~aDvn~DG~in~~D~~~l~~~ 58 (63)
T 2ccl_B 6 DVNGDGTINSTDLTMLKRSVLRAITLTDD----AKARADVDKNGSINAADVLLLSRY 58 (63)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCHH----HHHHHCTTCSSCCSHHHHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCccccc----hhhhhccCCCCCccHHHHHHHHHH
Confidence 6789999999998776655534332 222 245678999999999998655443
No 358
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=82.32 E-value=0.77 Score=31.03 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=30.8
Q ss_pred cCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHHhC
Q 032008 58 DFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMNLG 114 (149)
Q Consensus 58 d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~ 114 (149)
|.+++|.|+..+.......+....... ..-...|.|.+|.|+.++++-+-+.++
T Consensus 251 Dvn~D~~i~i~D~~~i~~~~~~~~~~~---~~~~~~DlN~DG~in~~Di~~v~k~f~ 304 (321)
T 3kcp_A 251 DIVKDNSINLLDVAEVIRCFNATKGSA---NYVEELDINRNGAINMQDIMIVHKHFG 304 (321)
T ss_dssp ECSSSSBCCHHHHHHHHTTTTCBTTST---TCCGGGCTTCSSBCSHHHHHHHHTTTT
T ss_pred cccCCCcccHHHHHHHHHHhccccCCc---cccccccccccCcccHHHHHHHHHHhc
Confidence 556777777777665554443321100 012666777777777777766665554
No 359
>1daq_A Endoglucanase SS, CELS; cellulose degradation, cellulosome, calcium-binding, hydrolase; NMR {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1dav_A
Probab=81.50 E-value=1.7 Score=22.36 Aligned_cols=46 Identities=13% Similarity=0.217 Sum_probs=20.2
Q ss_pred cCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHH
Q 032008 21 DKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFL 71 (149)
Q Consensus 21 d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~ 71 (149)
|.|++|.++..++..+-+.+.+..... -+...|.+++|.|+-.+|.
T Consensus 8 DvN~Dg~vn~~D~~~l~~yllg~~~~~-----~~~~aDvn~DG~in~~D~~ 53 (71)
T 1daq_A 8 DVNDDGKVNSTDAVALKRYVLRSGISI-----NTDNADLNEDGRVNSTDLG 53 (71)
T ss_dssp CSSSSSCSSGGGHHHHHHHHHCSCSCC-----CGGGTCSSSSSSCSSHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHcCCCccc-----cchhhcccCCCcccHHHHH
Confidence 445566666555544332221221110 0234455555555555554
No 360
>1ldd_A APC2WHB, anaphase promoting complex; ubiquitin, ligase, ubiquitination, ring finger, winged-helix; 2.00A {Saccharomyces cerevisiae} SCOP: a.4.5.34
Probab=79.30 E-value=5 Score=20.85 Aligned_cols=44 Identities=14% Similarity=0.113 Sum_probs=28.1
Q ss_pred HHHHHHhhcccCcHHHHHHHhhhhcCCCC--CcccHHHHHHHHHHh
Q 032008 70 FLTIMGRKMKENVSEELKEAFKVFDRDQD--GFISAAELRNVMMNL 113 (149)
Q Consensus 70 f~~~~~~~~~~~~~~~~~~~f~~~D~~~~--g~i~~~e~~~~l~~~ 113 (149)
|+..+..-....+.+.+...++.+-+.+. +.||.+|+..+|...
T Consensus 12 yI~GMLtN~~slpl~RIh~mLkmf~~~~~~~~~it~~eL~~fL~~~ 57 (74)
T 1ldd_A 12 FIEGMLTNLGAMKLHKIHSFLKITVPKDWGYNRITLQQLEGYLNTL 57 (74)
T ss_dssp HHHHHHHHHCSEEHHHHHHHHHHHSCGGGCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHhCCCCCCCCcCCHHHHHHHHHHH
Confidence 44444334455555778888888866543 347888888888753
No 361
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus}
Probab=77.82 E-value=4.4 Score=22.90 Aligned_cols=55 Identities=18% Similarity=0.404 Sum_probs=39.6
Q ss_pred chhhhHHHHHHHHHHHhhhcCC---CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhc
Q 032008 2 ADALTEDQIAEFQEAFCMIDKD---SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEV 57 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~---~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~ 57 (149)
.+.|+++++.++-..+..- .+ .++.++..++......+....++.+++.++-..+
T Consensus 38 ~R~LtdeEV~~Va~~L~~~-~~~~~~~~~i~~~dI~v~It~VT~e~P~peDI~RV~arL 95 (112)
T 2m0n_A 38 RRTLTEEQVQEVVAKLTDP-ESSAQIDGVVSKDEIEKFIADVTKDEPTAQDISRVASRL 95 (112)
T ss_dssp CSSCCHHHHHHHHHHHTCT-TTHHHHTSCCCTTHHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHhc-cCcccCCCCCCHHHHHHHHHHHhccCcCHHHHHHHHHHH
Confidence 3568888888876555431 11 1457888899998888877788888888887665
No 362
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=76.45 E-value=8 Score=21.67 Aligned_cols=27 Identities=19% Similarity=0.460 Sum_probs=11.6
Q ss_pred ccHHHHHHHHHHhcCCCCCHHHHHHHH
Q 032008 28 ITMKDLATVIQSAQDEHPRKEEVQEMI 54 (149)
Q Consensus 28 i~~~e~~~~l~~~~~~~~~~~~~~~~~ 54 (149)
++..++......+....++.+++.++-
T Consensus 66 i~~~dI~~~It~vT~~~P~~eDi~RV~ 92 (107)
T 3ol3_A 66 VTDDDIRNAVHQIIEKEPTAEEINQVA 92 (107)
T ss_dssp BCHHHHHHHHHHHHSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCcCHHHHHHHH
Confidence 444444444444434444444444443
No 363
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB: 3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Probab=72.30 E-value=6.2 Score=28.63 Aligned_cols=60 Identities=15% Similarity=0.236 Sum_probs=38.5
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHh----hCcCCCC-ceeHHHHHHHHh
Q 032008 87 KEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIRE----ADLDGDG-LVSFEEFARMMM 147 (149)
Q Consensus 87 ~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~----~d~~~~g-~i~~~ef~~~l~ 147 (149)
..+|..+ .++.+.|+...|...|+..|+..++-.++.++.. .....+| .|+.+-|.+++.
T Consensus 71 d~lf~~~-~~~~~~i~~~~f~~~l~~~Gl~~~DpRl~~~~~~l~~~~~~~~~~~~~d~~~F~~~i~ 135 (534)
T 3uo9_A 71 DLLFYTI-AEGQEKIPVHKFITALKSTGLRTSDPRLKECMDMLRLTLQTTSDGVMLDKDLFKKCVQ 135 (534)
T ss_dssp HHHHHHH-HTTCSSEEHHHHHHHHHHTTCCTTCGGGHHHHHHHHHHHHHCSSTTEECHHHHHHHHG
T ss_pred HHHHHHH-hCCCcEeeHHHHHHHHHHcCCCCCCchHHHHHHHHHHHhhccCccccccHHHHHHHhh
Confidence 4557777 4567888888888888888876664444444332 2222333 588888877664
No 364
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB: 3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Probab=70.01 E-value=24 Score=25.76 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=40.3
Q ss_pred HHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhc----cCCCCC-cccHHHHHHHHHh
Q 032008 15 EAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEV----DFDGNG-SIDFLEFLTIMGR 76 (149)
Q Consensus 15 ~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~----d~~~~g-~i~~~ef~~~~~~ 76 (149)
.+|..+ .++.+.|+...|...|+.. |+..+..-+++.+..+ ....+| .|+.+.|...+..
T Consensus 72 ~lf~~~-~~~~~~i~~~~f~~~l~~~-Gl~~~DpRl~~~~~~l~~~~~~~~~~~~~d~~~F~~~i~~ 136 (534)
T 3uo9_A 72 LLFYTI-AEGQEKIPVHKFITALKST-GLRTSDPRLKECMDMLRLTLQTTSDGVMLDKDLFKKCVQS 136 (534)
T ss_dssp HHHHHH-HTTCSSEEHHHHHHHHHHT-TCCTTCGGGHHHHHHHHHHHHHCSSTTEECHHHHHHHHGG
T ss_pred HHHHHH-hCCCcEeeHHHHHHHHHHc-CCCCCCchHHHHHHHHHHHhhccCccccccHHHHHHHhhc
Confidence 467777 4577899999999999999 7776654444444322 222233 6888888777653
No 365
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=68.87 E-value=27 Score=24.48 Aligned_cols=84 Identities=14% Similarity=0.224 Sum_probs=61.4
Q ss_pred CCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCC---ccc
Q 032008 26 GLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDG---FIS 102 (149)
Q Consensus 26 g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g---~i~ 102 (149)
-.+++.+|...+....+... ..+...+-..+|...++.|+.-+|-.+.....+-. .+...+......+-| .++
T Consensus 152 ~~v~W~~f~~~~~~~~~~~~-~~~~~~lk~~~~~t~~~~vs~~~f~~f~~~f~p~~---~l~~~~~~~~~~hpg~~af~t 227 (389)
T 2y1n_A 152 TIVPWKSFRQALHEVHPISS-GLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWS---SLLRNWNSLAVTHPGYMAFLT 227 (389)
T ss_dssp SEEEHHHHHHHHHTTSCCCC-HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTCCGG---GHHHHHHHHTTSCTTBCTTCC
T ss_pred eeeeHHHHHHHHHHhcCCCC-CchhhhHhhccCcccCCccchhhhchHHHHhccHH---HHHHHHHHHHhcCCchhhccc
Confidence 35899999999988734333 33445566667888999999999988887664433 355556667778888 899
Q ss_pred HHHHHHHHHHh
Q 032008 103 AAELRNVMMNL 113 (149)
Q Consensus 103 ~~e~~~~l~~~ 113 (149)
.+|+.+.|+..
T Consensus 228 y~ev~~~Lk~~ 238 (389)
T 2y1n_A 228 YDEVKARLQKF 238 (389)
T ss_dssp HHHHHHHHGGG
T ss_pred HHHHHHHHHHh
Confidence 99998888854
No 366
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=67.86 E-value=11 Score=20.76 Aligned_cols=24 Identities=21% Similarity=0.214 Sum_probs=9.9
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHH
Q 032008 101 ISAAELRNVMMNLGERLSDEETEQ 124 (149)
Q Consensus 101 i~~~e~~~~l~~~~~~~~~~~~~~ 124 (149)
++.+++.+-+..+|....++.+..
T Consensus 26 Vsae~L~eEfdefGi~~~d~VldK 49 (101)
T 2keb_A 26 ASAQQLAEELQIFGLDCEEALIEK 49 (101)
T ss_dssp CCHHHHHHHHHHHTCBCCHHHHHH
T ss_pred ccHHHHHHHHHHcCCCCCHHHHHH
Confidence 444444444444444444333333
No 367
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=66.17 E-value=3.6 Score=27.88 Aligned_cols=49 Identities=24% Similarity=0.456 Sum_probs=22.7
Q ss_pred cCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHH
Q 032008 21 DKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTI 73 (149)
Q Consensus 21 d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~ 73 (149)
|-+++|.|+..+...+.+.+ +-.-... .....+|.+.+|.|+.++..-.
T Consensus 251 Dvn~D~~i~i~D~~~i~~~~-~~~~~~~---~~~~~~DlN~DG~in~~Di~~v 299 (321)
T 3kcp_A 251 DIVKDNSINLLDVAEVIRCF-NATKGSA---NYVEELDINRNGAINMQDIMIV 299 (321)
T ss_dssp ECSSSSBCCHHHHHHHHTTT-TCBTTST---TCCGGGCTTCSSBCSHHHHHHH
T ss_pred cccCCCcccHHHHHHHHHHh-ccccCCc---cccccccccccCcccHHHHHHH
Confidence 44555666665555555444 2210000 0114455556666665554433
No 368
>4fqn_A Malcavernin; helical domain, harmonin-homology domain, protein-protein interaction, HOMO-dimer, protein binding; 1.90A {Homo sapiens}
Probab=65.04 E-value=12 Score=20.39 Aligned_cols=9 Identities=22% Similarity=-0.064 Sum_probs=3.6
Q ss_pred ccHHHHHHH
Q 032008 101 ISAAELRNV 109 (149)
Q Consensus 101 i~~~e~~~~ 109 (149)
++..+|+.-
T Consensus 48 ~~I~~Fc~k 56 (98)
T 4fqn_A 48 ASIHEFCIN 56 (98)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 344444433
No 369
>1wfx_A Probable RNA 2'-phosphotransferase; tRNA splicing, NAD, structural GE riken structural genomics/proteomics initiative, RSGI; 2.80A {Aeropyrum pernix} SCOP: d.166.1.5
Probab=63.15 E-value=21 Score=22.21 Aligned_cols=36 Identities=6% Similarity=0.021 Sum_probs=25.2
Q ss_pred CCCCCcccHHHHHHHHHHh--CCCCCHHHHHHHHHhhCc
Q 032008 95 RDQDGFISAAELRNVMMNL--GERLSDEETEQMIREADL 131 (149)
Q Consensus 95 ~~~~g~i~~~e~~~~l~~~--~~~~~~~~~~~~~~~~d~ 131 (149)
.+.+|+++.+++.+ +... +..++.+++..+...-++
T Consensus 24 ld~~G~v~v~~LL~-~~~~~~~~~~t~~~l~~vV~~~~K 61 (186)
T 1wfx_A 24 LTREGWARVSEVVE-GLRKAGWSWVEEWHIVGVALHDPK 61 (186)
T ss_dssp CCTTCCEEHHHHHH-HHHHTTCTTCCHHHHHHHHHHCSS
T ss_pred cCCCCCEEHHHHHh-hhhhcccCCCCHHHHHHHHhcCCC
Confidence 45678888888887 6554 456777788777776543
No 370
>3iz5_v 60S acidic ribosomal protein P21 - P2 (L12P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_v
Probab=59.21 E-value=22 Score=20.11 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=32.7
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q 032008 89 AFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREAD 130 (149)
Q Consensus 89 ~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
+|-.+-..++..+|.+++..++...|..+.+.-+..+...+.
T Consensus 6 AylL~~l~G~~~ptad~I~~ILkAaGveVe~~~~~lf~~aL~ 47 (113)
T 3iz5_v 6 AYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLSQVK 47 (113)
T ss_dssp HHHHHHHHTCCCCTTTTHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhc
Confidence 344444456677899999999999999998888888877774
No 371
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=56.72 E-value=12 Score=21.14 Aligned_cols=30 Identities=7% Similarity=0.248 Sum_probs=18.3
Q ss_pred ccHHHHHHHHHHhcCCCCCHHHHHHHHhhcc
Q 032008 28 ITMKDLATVIQSAQDEHPRKEEVQEMISEVD 58 (149)
Q Consensus 28 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d 58 (149)
+...+..-+|--+ .-.++.+++..+...+.
T Consensus 25 VP~~Dy~PLLALL-~r~Ltdeev~~Va~~L~ 54 (112)
T 2lky_A 25 VPGPDRVPLLALL-TRRLTNDEIKAIAEDLE 54 (112)
T ss_dssp CCHHHHHHHHHHH-TTTCCHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHH-cccCCHHHHHHHHHHHH
Confidence 4555555555555 56677777766666554
No 372
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=52.92 E-value=15 Score=20.41 Aligned_cols=30 Identities=20% Similarity=0.186 Sum_probs=14.8
Q ss_pred ccHHHHHHHHHHhcCCCCCHHHHHHHHhhcc
Q 032008 28 ITMKDLATVIQSAQDEHPRKEEVQEMISEVD 58 (149)
Q Consensus 28 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d 58 (149)
++..+..-+|--+ .-.++.+++..+...+.
T Consensus 23 VP~~Dy~PLlALL-~r~Ltdeev~~Va~~L~ 52 (103)
T 2kvc_A 23 IPPTDSFAVLALL-CRRLSHDEVKAVANELM 52 (103)
T ss_dssp CCHHHHHHHHHHH-TTTSCHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHH-hccCCHHHHHHHHHHHH
Confidence 3444444444444 44555555555555443
No 373
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=49.65 E-value=50 Score=21.34 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=22.6
Q ss_pred HHHHHHHHHhhhcCCCCCCccHH-----HHHHHHHHhcCCC
Q 032008 9 QIAEFQEAFCMIDKDSDGLITMK-----DLATVIQSAQDEH 44 (149)
Q Consensus 9 ~~~~l~~~f~~~d~~~~g~i~~~-----e~~~~l~~~~~~~ 44 (149)
+.+.++.....|...+.+.|..+ +|.+++..+ |..
T Consensus 35 Ql~~F~~~L~~FA~kHk~eI~~dp~fR~~F~~mc~si-GVD 74 (233)
T 1u5t_A 35 QLMVFQERLVEFAKKHNSELQASPEFRSKFMHMCSSI-GID 74 (233)
T ss_dssp HHHHHHHHHHHHHHHCTTTTTTCHHHHHHHHHHHHHH-TCC
T ss_pred HHHHHHHHHHHHHHHhHhhcccCHHHHHHHHHHHHHc-CCC
Confidence 33444555566666666666643 788888888 765
No 374
>2oy9_A UPF0223 protein BH2638; PFAM, structural genomics, PSI-2, protein structure initiative; 1.60A {Bacillus halodurans c-125} SCOP: a.276.1.1
Probab=48.63 E-value=24 Score=19.34 Aligned_cols=50 Identities=18% Similarity=0.269 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhc
Q 032008 8 DQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEV 57 (149)
Q Consensus 8 ~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~ 57 (149)
+++-.+...|.....--.+-|++++|....+.+....++..+-..+++.+
T Consensus 16 eEii~Vi~F~~~VE~AYE~GV~r~~ll~~Y~~FK~VVPsKsEEKql~reF 65 (98)
T 2oy9_A 16 EEVIDVVHFFQAIEQAYDQGIAREDLLGKYRRFKEIVPSKSEEKQLFRAY 65 (98)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 34444444444443322334444444444444433344444444444333
No 375
>1q87_A 39 kDa initiator binding protein; INR, core promoter, DNA binding protein; 2.32A {Trichomonas vaginalis} SCOP: e.47.1.1 PDB: 1q88_A 1q89_A
Probab=48.12 E-value=50 Score=20.89 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=39.3
Q ss_pred HHHHHhhccCCCCCcccHHHHHHHHHhhcccC--cHHHHHHHhhhh-cCCCCCcccHHHHHHHHHHhCCC
Q 032008 50 VQEMISEVDFDGNGSIDFLEFLTIMGRKMKEN--VSEELKEAFKVF-DRDQDGFISAAELRNVMMNLGER 116 (149)
Q Consensus 50 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~--~~~~~~~~f~~~-D~~~~g~i~~~e~~~~l~~~~~~ 116 (149)
+..+|..+-....|.++.+.|+.......... ..+....+.+.+ -+...-.||..||..++-++|..
T Consensus 39 vi~iW~eiv~~~~i~~~~~~fI~~aa~~F~~~~Q~l~NA~~vI~~IL~~k~t~~iT~~Df~kFlA~FGP~ 108 (221)
T 1q87_A 39 VDEIWFRLTQKTDGTVMRDFLIEKAAEYFKQPEQPKQNAIEVISAIMAPQEEQTKSKADLYKFLAMFGPY 108 (221)
T ss_dssp HHHHHHHHHSSSSSEEEHHHHHHHHHHHHSCTTSCHHHHHHHHHHHSCCSSCCEEEHHHHHHHHHHHCCG
T ss_pred HHHHHHHHhccccccccHHHHHHHHHHHHhccchhhhhHHHHHHHHhcCCCCceeeHHHHHHHHHHhCCc
Confidence 34455555555566788888877665544332 123333444333 34445567888888888888753
No 376
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=47.17 E-value=39 Score=19.43 Aligned_cols=79 Identities=19% Similarity=0.177 Sum_probs=47.1
Q ss_pred CCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccH
Q 032008 24 SDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISA 103 (149)
Q Consensus 24 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~ 103 (149)
-||.++..|...+-..+..+.++..+...+...+. .....+....+...........+...|+..- -||.++.
T Consensus 31 ADG~v~~~E~~~l~~~l~~lgl~~~e~~~l~~~~~-----~~~~~~~~~~~~~~~~e~r~~ll~~L~~IA~--ADG~i~~ 103 (133)
T 2h5n_A 31 ADGKIKPAEIAVMTREFMRFGILQDQVDLLLKASD-----SIEASQAVALIARMDEERKKYVASYLGVIMA--SDGDIDD 103 (133)
T ss_dssp TTSCCCHHHHHHHHHHHGGGTCCHHHHHHHHHHHT-----TSCHHHHHHHHHTSCHHHHHHHHHHHHHHSC--BTTBCCH
T ss_pred HcCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-----hccHHHHHHHHHcCCHHHHHHHHHHHHHHhh--cCCCCCH
Confidence 47889988877765555346677778888887774 2345565554433211111144555566664 4577888
Q ss_pred HHHHHH
Q 032008 104 AELRNV 109 (149)
Q Consensus 104 ~e~~~~ 109 (149)
.|..-+
T Consensus 104 ~E~~lL 109 (133)
T 2h5n_A 104 NELALW 109 (133)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776443
No 377
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=47.13 E-value=43 Score=19.88 Aligned_cols=34 Identities=15% Similarity=0.244 Sum_probs=29.8
Q ss_pred CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q 032008 97 QDGFISAAELRNVMMNLGERLSDEETEQMIREAD 130 (149)
Q Consensus 97 ~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
..+..+.+|+...|...|+.+++.-+..-+..+.
T Consensus 16 ~~~~~tq~eL~~~L~~~G~~VtqaTisRDL~eL~ 49 (149)
T 1b4a_A 16 SNDIETQDELVDRLREAGFNVTQATVSRDIKEMQ 49 (149)
T ss_dssp HSCCCSHHHHHHHHHHTTCCCCHHHHHHHHHHTT
T ss_pred HCCCccHHHHHHHHHHcCCCcCHHHHHHHHHHcC
Confidence 3467899999999999999999999999998764
No 378
>2lbf_B 60S acidic ribosomal protein P2; ribosome, stalk, P1/P2; NMR {Homo sapiens} PDB: 2w1o_A
Probab=46.58 E-value=29 Score=17.72 Aligned_cols=35 Identities=17% Similarity=0.359 Sum_probs=29.3
Q ss_pred CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q 032008 96 DQDGFISAAELRNVMMNLGERLSDEETEQMIREAD 130 (149)
Q Consensus 96 ~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
++...+|.+++..++...|..+.+.-+..+...+.
T Consensus 14 ~g~~~~ta~~I~~il~aaGvevd~~~~~~~~~aL~ 48 (70)
T 2lbf_B 14 GGNSSPSAKDIKKILDSVGIEADDDRLNKVISELN 48 (70)
T ss_dssp HTCSSCCHHHHHHHHHTTTCCCCTTHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHHc
Confidence 34457999999999999999998888888888775
No 379
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=42.33 E-value=15 Score=18.04 Aligned_cols=12 Identities=33% Similarity=0.816 Sum_probs=8.7
Q ss_pred CCceeHHHHHHH
Q 032008 134 DGLVSFEEFARM 145 (149)
Q Consensus 134 ~g~i~~~ef~~~ 145 (149)
||.|+.+||...
T Consensus 7 Dgpit~qeylev 18 (63)
T 2w6a_A 7 DGAVTLQEYLEL 18 (63)
T ss_dssp CCSSCHHHHHHH
T ss_pred CCcchHHHHHHH
Confidence 577888888754
No 380
>1m1e_B ICAT; cell adhesion, cytoskeleton, armadillo repeats, transciption factor, structural protein; 2.10A {Homo sapiens} SCOP: a.161.1.1 PDB: 1luj_B 1t08_B
Probab=40.07 E-value=42 Score=17.70 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCCCHHHHHHH
Q 032008 105 ELRNVMMNLGERLSDEETEQM 125 (149)
Q Consensus 105 e~~~~l~~~~~~~~~~~~~~~ 125 (149)
|+...|+.+|..+++++...+
T Consensus 21 EILtALkKLGe~Ls~eE~~FL 41 (81)
T 1m1e_B 21 RVLLMLRKMGSNLTASEEEFL 41 (81)
T ss_dssp HHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHhcccCCHHHHHHH
Confidence 566678888999998886544
No 381
>4e2i_2 DNA polymerase alpha subunit B; replication initiation, hydrolase-DNA binding complex, hydro binding protein complex; HET: DNA; 5.00A {Homo sapiens}
Probab=39.79 E-value=42 Score=17.59 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=17.0
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHhh
Q 032008 101 ISAAELRNVMMNLGERLSDEETEQMIREA 129 (149)
Q Consensus 101 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 129 (149)
+|.+++.+-|..+|+..+++.++.+...+
T Consensus 3 vs~e~l~~el~~Fgi~c~d~v~eKl~ElC 31 (78)
T 4e2i_2 3 ASAQQLAEELQIFGLDCEEALIEKLVELC 31 (78)
T ss_dssp CCHHHHHHHHHHTTCCCCHHHHHHHHTHH
T ss_pred cCHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 45666666666666666665555554443
No 382
>3izc_v 60S acidic ribosomal protein (P2); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_v
Probab=36.49 E-value=57 Score=18.18 Aligned_cols=30 Identities=13% Similarity=0.410 Sum_probs=26.0
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q 032008 101 ISAAELRNVMMNLGERLSDEETEQMIREAD 130 (149)
Q Consensus 101 i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
+|.+++..+++..|..+.+.-+..+...+.
T Consensus 17 ~tad~I~~ilkAaGveVe~~~~~~f~~aL~ 46 (106)
T 3izc_v 17 PDATKIKAILESVGIEIEDEKVSSVLSALE 46 (106)
T ss_dssp CTTTTHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCcCHHHHHHHHHHcC
Confidence 899999999999999988888888777775
No 383
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=36.10 E-value=25 Score=22.72 Aligned_cols=56 Identities=16% Similarity=0.402 Sum_probs=34.3
Q ss_pred chhhhHHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhc
Q 032008 2 ADALTEDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEV 57 (149)
Q Consensus 2 ~~~l~~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~ 57 (149)
+..++++|++-++.+...+=...+|.++..+..++-.......++..+.+.++..+
T Consensus 90 aT~yt~~Ei~~fk~lle~i~~s~~~~~s~~~~lnl~~~~~~k~l~~~eae~lL~~l 145 (238)
T 3nw0_A 90 ATDFAENELDLFRKALELIIDSETGFASSTNILNLVDQLKGKKMRKKEAEQVLQKF 145 (238)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHSSSSCEEHHHHHGGGTTCSSSCCCHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHhCCCCceeHHHHHHHHhhcccCCCCHHHHHHHHHHH
Confidence 34678899988888877765556678876555443322212345666666665554
No 384
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=35.74 E-value=27 Score=18.42 Aligned_cols=26 Identities=27% Similarity=0.457 Sum_probs=17.4
Q ss_pred CCCCCHHHHHHHHHhhCcCCCCceeHH
Q 032008 114 GERLSDEETEQMIREADLDGDGLVSFE 140 (149)
Q Consensus 114 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ 140 (149)
|..++..+.+.+|..+. +-.|.|+++
T Consensus 63 G~~Lp~~EaeKVFELLN-dFkGsIDwe 88 (95)
T 2k5c_A 63 GKTLPRREAEKVFELLN-DFKGGIDWE 88 (95)
T ss_dssp TTSSCTTTHHHHHHHHH-SCSSSCBTT
T ss_pred cccCChHHHHHHHHHHH-HccCccccc
Confidence 55567777788888776 445667654
No 385
>1bax_A M-PMV MA, M-PMV matrix protein; core protein, polyprotein, myristylation; NMR {Mason-pfizer monkey virus} SCOP: a.61.1.3 PDB: 2f76_X 2f77_X
Probab=33.13 E-value=62 Score=17.62 Aligned_cols=10 Identities=20% Similarity=0.391 Sum_probs=4.2
Q ss_pred HHHHHhhhhc
Q 032008 85 ELKEAFKVFD 94 (149)
Q Consensus 85 ~~~~~f~~~D 94 (149)
.+...|..+|
T Consensus 30 ~L~~Ff~fi~ 39 (94)
T 1bax_A 30 DLLKFFDFVK 39 (94)
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 386
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=32.74 E-value=31 Score=19.36 Aligned_cols=12 Identities=25% Similarity=0.263 Sum_probs=5.6
Q ss_pred CcccHHHHHHHH
Q 032008 63 GSIDFLEFLTIM 74 (149)
Q Consensus 63 g~i~~~ef~~~~ 74 (149)
|.++..+|...+
T Consensus 79 ~~it~ae~Rd~l 90 (121)
T 2pjp_A 79 GSTCAADFRDRL 90 (121)
T ss_dssp SSEEHHHHHHHH
T ss_pred CCccHHHHHHHH
Confidence 344444444444
No 387
>2kzs_A Death-associated protein 6; helical bundle,DHB domain, FAS death-domain associated prote rassf1C interacting domain, apoptosis; NMR {Homo sapiens} PDB: 2kzu_A
Probab=32.44 E-value=50 Score=17.76 Aligned_cols=45 Identities=22% Similarity=0.361 Sum_probs=19.1
Q ss_pred HHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 032008 67 FLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVMMN 112 (149)
Q Consensus 67 ~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
++||+..+.......+ +.+...-.....-..-+++..||+..|..
T Consensus 17 feEFv~~C~~~t~d~P-eV~~fL~~r~~kas~~fL~SveF~n~L~r 61 (94)
T 2kzs_A 17 FEEFLELCKMQTADHP-EVVPFLYNRQQRAHSLFLASAEFCNILSR 61 (94)
T ss_dssp HHHHHHHHHHHCTTCT-THHHHHHHHHHTBCHHHHTSHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCc-HHHHHHHHHhccCCchhhhHHHHHHHHHH
Confidence 4555555543322221 33333333333333344555555555443
No 388
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=31.96 E-value=61 Score=17.21 Aligned_cols=66 Identities=15% Similarity=0.065 Sum_probs=27.6
Q ss_pred CCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcHHHHHHHhhhhcCCCCCcccHHHHHHHH
Q 032008 44 HPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVSEELKEAFKVFDRDQDGFISAAELRNVM 110 (149)
Q Consensus 44 ~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~l 110 (149)
..+.+-+.+++...-.+.+-+|+-+-..-. ..++..-..+.+.++-..-...+++.|+.+++.+++
T Consensus 12 ~i~~~li~ril~~~F~~~kTkIs~dAl~l~-aeyl~iFV~EAv~RA~~~a~~e~~~~le~e~LEki~ 77 (84)
T 4dra_E 12 GFRKELVSRLLHLHFKDDKTKVSGDALQLM-VELLKVFVVEAAVRGVRQAQAEDALRVDVDQLEKVL 77 (84)
T ss_dssp CCCHHHHHHHHHTTCSSTTCEECHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCccccHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHH
Confidence 344445555555444444555554443211 111111111222222222223456667766666554
No 389
>3dxl_A Allergen AED A 2; odorant-binding protein, all-helical, secreted; 1.30A {Aedes aegypti} PDB: 3dy9_A 3dye_A* 3dzt_A*
Probab=30.39 E-value=97 Score=20.90 Aligned_cols=56 Identities=5% Similarity=0.193 Sum_probs=36.2
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhCcC--CCCceeHHHHHHHHh
Q 032008 88 EAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREADLD--GDGLVSFEEFARMMM 147 (149)
Q Consensus 88 ~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~--~~g~i~~~ef~~~l~ 147 (149)
..+..++ .+|.|..+++...|...+.+ +..+..+++....+ .+....-.+|..+|.
T Consensus 195 k~~g~~~--~~G~i~~~~I~~dl~~v~~~--~~~v~~~l~~C~~~k~~~~~~kA~~fykCll 252 (303)
T 3dxl_A 195 KGIRYIT--KDNQLDVEEVKRDFKLVNKD--TKALEEVLNDCKSKEPSNAKEKSWHYYKCLV 252 (303)
T ss_dssp HHTTSBC--TTSCBCHHHHHHHHHHTTCC--SHHHHHHHHHHHHTCCSSGGGHHHHHHHHHH
T ss_pred hhcceeC--CCCCCcHHHHHHHHHHhCcC--cHHHHHHHHhcccccCCCccccHHHHHHHHh
Confidence 3344554 67789999999999988865 55666777766543 223345556665553
No 390
>2k6x_A Sigma-A, RNA polymerase sigma factor RPOD; DNA-binding, transcription, transcription regulation; NMR {Thermotoga maritima}
Probab=30.05 E-value=41 Score=16.99 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=22.4
Q ss_pred CCCccHHHHHHHHHHhcCCC--CCHHHHHHHHhhccC
Q 032008 25 DGLITMKDLATVIQSAQDEH--PRKEEVQEMISEVDF 59 (149)
Q Consensus 25 ~g~i~~~e~~~~l~~~~~~~--~~~~~~~~~~~~~d~ 59 (149)
.|+|+++++...+.. .. ++.+++..++..+..
T Consensus 21 ~G~lTy~EI~d~l~~---~~~~ld~e~id~i~~~L~~ 54 (72)
T 2k6x_A 21 KGYITYEDIDKAFPP---DFEGFDTNLIERIHEELEK 54 (72)
T ss_dssp HSSCBHHHHHHHCSC---SCSSCCHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHhCcc---ccccCCHHHHHHHHHHHHH
Confidence 478999999877642 23 577788888766643
No 391
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=29.45 E-value=55 Score=15.89 Aligned_cols=31 Identities=13% Similarity=0.274 Sum_probs=28.1
Q ss_pred cccHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q 032008 100 FISAAELRNVMMNLGERLSDEETEQMIREAD 130 (149)
Q Consensus 100 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
.+|.+++..+++..|..+.+.-...+...+.
T Consensus 16 ~~t~~~I~~il~aaGveve~~~~~~~~~~L~ 46 (58)
T 3a1y_A 16 EINEENLKAVLQAAGVEPEEARIKALVAALE 46 (58)
T ss_dssp CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHcCCCccHHHHHHHHHHHC
Confidence 7999999999999999999988888888875
No 392
>2jg6_A DNA-3-methyladenine glycosidase; 3-methyladenine-DNA-glycosylase-I, hydrolase; 1.70A {Staphylococcus aureus} PDB: 4aia_A* 4ai5_A* 4ai4_A
Probab=29.05 E-value=37 Score=21.09 Aligned_cols=46 Identities=11% Similarity=0.324 Sum_probs=37.9
Q ss_pred HHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhh
Q 032008 10 IAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISE 56 (149)
Q Consensus 10 ~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 56 (149)
.+.++++|..+|+..--..+.+++.+++... ++..++..++.+...
T Consensus 53 Re~fR~AF~~FD~~~VA~~~e~dve~Ll~d~-gIIRnr~KI~A~i~N 98 (186)
T 2jg6_A 53 KEAYEEAFYDFEPEKVAQMTAQDIDRLMTFP-NIVHHRKKLEAIVNQ 98 (186)
T ss_dssp HHHHHHHTGGGCHHHHTTCCHHHHHHHTTCT-TSCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc-cchhhHHHHHHHHHH
Confidence 4568899999999888888999999999888 888888877666543
No 393
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=28.56 E-value=35 Score=21.62 Aligned_cols=72 Identities=13% Similarity=0.168 Sum_probs=46.7
Q ss_pred CchhhhHHHHHHHH---HHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHhhccCCCCCc--ccHHHHHHHHH
Q 032008 1 MADALTEDQIAEFQ---EAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMISEVDFDGNGS--IDFLEFLTIMG 75 (149)
Q Consensus 1 ~~~~l~~~~~~~l~---~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~g~--i~~~ef~~~~~ 75 (149)
|.+.+|...++++- +....+...+-..|+..++.+.+ .++..++++=+..+..-|... -+-+++...+.
T Consensus 3 ~~~~ip~~ti~RL~~Y~r~l~~l~~~g~~~isS~ela~~~------gv~~~qiRkDls~fg~~G~~g~GY~V~~L~~~i~ 76 (212)
T 3keo_A 3 MDKSIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADAL------GIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFA 76 (212)
T ss_dssp ---CCCHHHHTTHHHHHHHHHHHHHTTCCEECHHHHHHHH------TSCHHHHHHHHHTTGGGTTTSSSEEHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHCCCeEECHHHHHHHH------CCCHHHHHHHHHHHhhcCCCCCCEEHHHHHHHHH
Confidence 34557778887765 44456666788899999999976 356778888887776544322 45566666555
Q ss_pred hhc
Q 032008 76 RKM 78 (149)
Q Consensus 76 ~~~ 78 (149)
..+
T Consensus 77 ~~L 79 (212)
T 3keo_A 77 EIL 79 (212)
T ss_dssp HHT
T ss_pred HHh
Confidence 543
No 394
>2ofk_A 3-methyladenine DNA glycosylase I, constitutive; DNA repair, base excision, helix-hairpin-helix, hydrolase; HET: PGE; 1.50A {Salmonella typhi} PDB: 2ofi_A* 1lmz_A 1nku_A 1p7m_A*
Probab=28.28 E-value=12 Score=23.26 Aligned_cols=42 Identities=14% Similarity=0.266 Sum_probs=32.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHH
Q 032008 84 EELKEAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQM 125 (149)
Q Consensus 84 ~~~~~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~ 125 (149)
+.++.+|.-||+..--..+.+++..++...|+--+..-++.+
T Consensus 54 e~fr~AF~~Fd~~~VA~~~e~~ve~Ll~d~~IIRnr~KI~A~ 95 (183)
T 2ofk_A 54 ENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRHRGKIQAI 95 (183)
T ss_dssp HHHHHHTGGGCHHHHHTCCHHHHHHHTTCTTSCCCHHHHHHH
T ss_pred HHHHHHHcCCCHHHHcCCCHHHHHHHhcCCcchhhHHHHHHH
Confidence 678999999999888888899999888887765554444443
No 395
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=26.72 E-value=41 Score=15.18 Aligned_cols=15 Identities=27% Similarity=0.346 Sum_probs=10.2
Q ss_pred hhhHHHHHHHHHHHh
Q 032008 4 ALTEDQIAEFQEAFC 18 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~ 18 (149)
.|+++|.+++.++|.
T Consensus 2 gLT~~EA~EfH~~~~ 16 (41)
T 1nkz_B 2 TLTAEQSEELHKYVI 16 (41)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 466777777776664
No 396
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=26.59 E-value=1.1e+02 Score=18.58 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=27.3
Q ss_pred cccHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q 032008 100 FISAAELRNVMMNLGERLSDEETEQMIREAD 130 (149)
Q Consensus 100 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
.=|.+|+...|...|+.+++.-+..-++.+.
T Consensus 34 I~tQeEL~~~L~~~Gi~vTQATlSRDikEL~ 64 (170)
T 3lap_A 34 VRSQNELAALLAAEGIEVTQATLSRDLEELG 64 (170)
T ss_dssp CCSHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHcCCCcCchhHHHHHHHcC
Confidence 4588999999999999999999988888775
No 397
>3nhi_A D7 protein; all helical, odorant-binding protein, ligand-binding protein transport protein; HET: EAH; 1.43A {Anopheles stephensi} PDB: 3ngv_A* 3nht_A*
Probab=26.55 E-value=1.2e+02 Score=20.33 Aligned_cols=85 Identities=9% Similarity=0.126 Sum_probs=51.8
Q ss_pred CCCCHHHHHHHHhhccCCCCCcccHHHHHHHHHhh-c-c-----------cCcH------HHHHHHhhhhcCCCCCcccH
Q 032008 43 EHPRKEEVQEMISEVDFDGNGSIDFLEFLTIMGRK-M-K-----------ENVS------EELKEAFKVFDRDQDGFISA 103 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~-~-----------~~~~------~~~~~~f~~~D~~~~g~i~~ 103 (149)
+..+.+....+|..........-.+.+|..--... . . ...+ ..+-+.+..+| ++| |..
T Consensus 131 f~g~~~~~~~~y~~~~~vK~k~~~~~~~Ce~~~~~~s~k~~lC~iR~y~~~~~~~~k~~~dCvfk~~g~md--~~G-i~~ 207 (296)
T 3nhi_A 131 YHGTVEGAAKIYAAMPEIKQKGESFHAYCEKRAWKGNKQSEWKNGRRYKLTGSPELKDAIDCIFRGLRYMD--DTG-LKV 207 (296)
T ss_dssp TTCSHHHHHHHHHHCTTSCCTTBCHHHHHHHHHSCSSSCCTTTTSCCCCCCCCHHHHHHHHHHHHHTTSEE--TTE-ECH
T ss_pred HcCCHHHHHHHHHhCcchhhccchHHHHHHhhccCcccHHHHHHHHccCCCCCccHHHHHhhHhhhcccee--CCC-CCH
Confidence 34456666777776655555556666665433221 0 0 0000 22334455555 556 999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHhhC
Q 032008 104 AELRNVMMNLGERLSDEETEQMIREAD 130 (149)
Q Consensus 104 ~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
+++..-+...|.+-.+.++..++....
T Consensus 208 ~~I~~dl~~v~~~~~~~~v~~~l~~C~ 234 (296)
T 3nhi_A 208 DEIVRDFNLINKSELEPEVRSVLASCK 234 (296)
T ss_dssp HHHHHHHHHTTCGGGHHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCCcchHHHHHHHHhcc
Confidence 999999999997655778888887776
No 398
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=26.51 E-value=71 Score=16.18 Aligned_cols=41 Identities=7% Similarity=0.102 Sum_probs=31.7
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHhhC
Q 032008 88 EAFKVFDRDQDGFISAAELRNVMMNLGERLSDEETEQMIREAD 130 (149)
Q Consensus 88 ~~f~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (149)
.++-..|. + ..+|.+++..+++..|..+.+.-...+...+.
T Consensus 12 AAllL~~~-g-~~~ta~~I~~il~AaGveve~~~~~lf~~aL~ 52 (69)
T 2lbf_A 12 SALILHDD-E-VTVTEDKINALIKAAGVNVEPFWPGLFAKALA 52 (69)
T ss_dssp HHHHHHHH-T-CCCCHHHHHHHHHHHTCCCCTHHHHHHHHHTT
T ss_pred HHHHHHcC-C-CCCCHHHHHHHHHHcCCCccHHHHHHHHHHHC
Confidence 34444454 3 37999999999999999998888888877774
No 399
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=25.98 E-value=49 Score=20.35 Aligned_cols=26 Identities=27% Similarity=0.336 Sum_probs=19.9
Q ss_pred hhhhcCCCCCcccHHHHHHHHHHhCC
Q 032008 90 FKVFDRDQDGFISAAELRNVMMNLGE 115 (149)
Q Consensus 90 f~~~D~~~~g~i~~~e~~~~l~~~~~ 115 (149)
+|-+...+.+.|...|+++++..+|.
T Consensus 11 LRGINVGG~nkv~MadLr~~l~~lGf 36 (183)
T 2hiy_A 11 VRGINVGGKNKVVMAELRQELTNLGL 36 (183)
T ss_dssp CSSCSCC-CCCCCHHHHHHHHHHHTC
T ss_pred ccceecCCCCcccHHHHHHHHHHcCC
Confidence 45666777788999999999998754
No 400
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=25.64 E-value=78 Score=20.48 Aligned_cols=35 Identities=17% Similarity=0.394 Sum_probs=19.1
Q ss_pred CCCccHHHHHHHHHHhcC---CCCCHHHHHHHHhhccC
Q 032008 25 DGLITMKDLATVIQSAQD---EHPRKEEVQEMISEVDF 59 (149)
Q Consensus 25 ~g~i~~~e~~~~l~~~~~---~~~~~~~~~~~~~~~d~ 59 (149)
.|.|+..++...+....| ..++++++.+....+..
T Consensus 92 GGli~L~el~~~~~r~Rg~~~~~IS~dDi~rAik~L~~ 129 (234)
T 3cuq_A 92 GGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKA 129 (234)
T ss_dssp SSEEEHHHHHHHHHHTTTTCCSSCCHHHHHHHHHHHGG
T ss_pred CCeeEHHHHHHHHHHhcCCccCccCHHHHHHHHHHHHh
Confidence 466666666666655433 34555555555544433
No 401
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=25.44 E-value=15 Score=27.43 Aligned_cols=48 Identities=17% Similarity=0.235 Sum_probs=0.0
Q ss_pred hcCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHhhCcCCCCceeHHHHH
Q 032008 93 FDRDQDGFISAAELRNVMMNL-GERLSDEETEQMIREADLDGDGLVSFEEFA 143 (149)
Q Consensus 93 ~D~~~~g~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~ 143 (149)
=|.|++|.|+.-++..+-+.+ |. .. ....-....|.|+||.|+--+|.
T Consensus 548 GDvN~Dg~vn~~D~~~lk~yllg~-~~--~~~~~~~~aDvn~dg~in~~D~~ 596 (611)
T 2yik_A 548 GDLNGDQKVTSTDYTMLKRYLMKS-ID--RFNTSEQAADLNRDGKINSTDLT 596 (611)
T ss_dssp ----------------------------------------------------
T ss_pred eccCCCCcccHHHHHHHHHHHcCC-CC--CccccccccccCCCCcccHHHHH
Confidence 367788888777765443322 21 11 01111456788889988777764
No 402
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=25.26 E-value=86 Score=16.76 Aligned_cols=29 Identities=28% Similarity=0.287 Sum_probs=21.2
Q ss_pred cccHHHHHHHHHHhCCCCCHHHHHHHHHh
Q 032008 100 FISAAELRNVMMNLGERLSDEETEQMIRE 128 (149)
Q Consensus 100 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~~ 128 (149)
.|+.+++..+-+-....++++++..+...
T Consensus 5 ~i~~e~V~~iA~LArL~l~eeE~~~~~~~ 33 (92)
T 3kfu_G 5 ELSPELLRKLETLAKIRLSPEEEALLLQD 33 (92)
T ss_dssp CCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 47888888888877778887776555443
No 403
>1nha_A TFIIF-alpha, transcription initiation factor IIF, alpha subunit; transcription factor, human general transcription factor TFIIF, RAP74; NMR {Homo sapiens} SCOP: a.4.5.30 PDB: 1onv_A
Probab=25.19 E-value=84 Score=16.60 Aligned_cols=16 Identities=13% Similarity=0.216 Sum_probs=9.0
Q ss_pred CCCcccHHHHHHHHHH
Q 032008 97 QDGFISAAELRNVMMN 112 (149)
Q Consensus 97 ~~g~i~~~e~~~~l~~ 112 (149)
.++.|+.++++.+|.+
T Consensus 15 ~~~~iTEe~VRryL~r 30 (82)
T 1nha_A 15 GDVQVTEDAVRRYLTR 30 (82)
T ss_dssp -CCCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHh
Confidence 3455666666666663
No 404
>2lz1_A Nuclear factor erythroid 2-related factor 2; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=24.85 E-value=89 Score=16.78 Aligned_cols=8 Identities=13% Similarity=0.339 Sum_probs=4.0
Q ss_pred CCCccHHH
Q 032008 25 DGLITMKD 32 (149)
Q Consensus 25 ~g~i~~~e 32 (149)
++..+.+|
T Consensus 18 ~~~~srDE 25 (90)
T 2lz1_A 18 EAHLTRDE 25 (90)
T ss_dssp CCCCCHHH
T ss_pred hhccchhH
Confidence 34555555
No 405
>3h0l_C Glutamyl-tRNA(Gln) amidotransferase subunit C; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_C 3h0r_C*
Probab=24.70 E-value=89 Score=16.74 Aligned_cols=28 Identities=14% Similarity=0.146 Sum_probs=19.3
Q ss_pred ccHHHHHHHHHHhCCCCCHHHHHHHHHh
Q 032008 101 ISAAELRNVMMNLGERLSDEETEQMIRE 128 (149)
Q Consensus 101 i~~~e~~~~l~~~~~~~~~~~~~~~~~~ 128 (149)
|+.+++..+-+-....++++++..+...
T Consensus 2 i~~e~v~~iA~LArL~l~eee~~~~~~~ 29 (94)
T 3h0l_C 2 VDREWVLKIAKLARLELKEEEIEVFQKQ 29 (94)
T ss_dssp CCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 6777888777777777887776555433
No 406
>1c52_A Cytochrome-C552; electron transport protein, MAD, thermostability; HET: HEM; 1.28A {Thermus thermophilus} SCOP: a.3.1.1 PDB: 1qyz_A* 1r0q_A* 2fwl_A* 1foc_A* 1dt1_A*
Probab=23.83 E-value=1e+02 Score=17.22 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=24.3
Q ss_pred hhhHHHHHHHHHHHhhhcCCC-----CCCccHHHHHHHHHHhcCCCCCHHHHHHHHh
Q 032008 4 ALTEDQIAEFQEAFCMIDKDS-----DGLITMKDLATVIQSAQDEHPRKEEVQEMIS 55 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~~~d~~~-----~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~ 55 (149)
.|+++++..+...+...-.+. ...++.+++..+- ....+..++.+.-.
T Consensus 74 ~Lsd~ei~~l~~Yl~~~~~~~~~~~~~~~~t~~~v~~~r----~~~~~~~~~~~~r~ 126 (131)
T 1c52_A 74 QLKDEEIAAVLNHIATAWGDAKKVKGFKPFTAEEVKKLR----AKKLTPQQVLAERK 126 (131)
T ss_dssp TSCHHHHHHHHHHHHHTTSTGGGSTTCCCCCHHHHHHHT----TSCCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHcCCccCCCCCCCCCHHHHHHHH----hccCCHHHHHHHHH
Confidence 356666666665555543332 3456666655533 23344444444433
No 407
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=23.49 E-value=91 Score=16.39 Aligned_cols=15 Identities=7% Similarity=0.178 Sum_probs=8.2
Q ss_pred CCCCcccHHHHHHHH
Q 032008 96 DQDGFISAAELRNVM 110 (149)
Q Consensus 96 ~~~g~i~~~e~~~~l 110 (149)
++.+.|..+++.+++
T Consensus 59 e~~~~le~~~LEki~ 73 (81)
T 3b0b_C 59 EDLEKVDIEHVEKVL 73 (81)
T ss_dssp TTCSEECHHHHHHHH
T ss_pred CCCCeecHHHHHHHH
Confidence 455566666555543
No 408
>1lva_A Selenocysteine-specific elongation factor; winged-helix, translation; 2.12A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35 a.4.5.35 a.4.5.35 PDB: 2uwm_A 2ply_A 1wsu_A
Probab=23.49 E-value=1.6e+02 Score=19.08 Aligned_cols=12 Identities=8% Similarity=0.290 Sum_probs=6.0
Q ss_pred CCccHHHHHHHH
Q 032008 26 GLITMKDLATVI 37 (149)
Q Consensus 26 g~i~~~e~~~~l 37 (149)
|.|+..+|+..+
T Consensus 215 ~~it~a~~Rd~l 226 (258)
T 1lva_A 215 GPFGLAEARDAL 226 (258)
T ss_dssp SCBCHHHHHHHH
T ss_pred CCcCHHHHHHHh
Confidence 455555555544
No 409
>3v2l_A AGAP005208-PA; odorant binding olfaction, general odorant binding protein, transport, secreted, odorant-binding protein; HET: PG4; 1.80A {Anopheles gambiae} PDB: 4f7f_A* 3vb1_A
Probab=23.45 E-value=1e+02 Score=16.84 Aligned_cols=83 Identities=10% Similarity=0.129 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhhhcCCCCCCccHHHHHHHHHHhcCCCCCHH---HHHHHHhhccCCCCCcccHHHHHHHHHhhcccCcH
Q 032008 7 EDQIAEFQEAFCMIDKDSDGLITMKDLATVIQSAQDEHPRKE---EVQEMISEVDFDGNGSIDFLEFLTIMGRKMKENVS 83 (149)
Q Consensus 7 ~~~~~~l~~~f~~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~---~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 83 (149)
.+++.+..+.++.-.....| ++.+.+..+.. . ..+.++. .+.-++..+..-.+|.+..+..+..+....+....
T Consensus 3 ~eq~~~~~~~~~~~C~~e~g-v~~e~i~~~~~-~-~~p~d~~~kC~~~C~~~k~g~~~d~~~~~~~~~~~~~~~~~~~~~ 79 (120)
T 3v2l_A 3 VEQMMKSGEMIRSVCLGKTK-VAEELVNGLRE-S-KFADVKELKCYVNCVMEMMQTMKKGKLNYDASVKQIDTIMPDELA 79 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCHHHHHHTTT-T-CCCCCHHHHHHHHHHHHHTTSEETTEECHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhC-cCHHHHHHHHc-C-CCCCCcccchHHHHHHHHhCCccCCCccHHHHHHHHHHhccchhH
Confidence 34444444444333332232 45555555432 1 2222222 23445555544345667776666655544433222
Q ss_pred HHHHHHhhh
Q 032008 84 EELKEAFKV 92 (149)
Q Consensus 84 ~~~~~~f~~ 92 (149)
+.+..+...
T Consensus 80 ~~~~~~~~~ 88 (120)
T 3v2l_A 80 GPMRAALDI 88 (120)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 334444433
No 410
>2krk_A 26S protease regulatory subunit 8; structural genomics, northeast structural genomics consortium (NESG), target HR3102A, PSI-2; NMR {Homo sapiens}
Probab=22.86 E-value=92 Score=16.23 Aligned_cols=12 Identities=0% Similarity=0.230 Sum_probs=5.4
Q ss_pred cccHHHHHHHHH
Q 032008 100 FISAAELRNVMM 111 (149)
Q Consensus 100 ~i~~~e~~~~l~ 111 (149)
.|+.++|...+.
T Consensus 68 ~I~~~df~~Al~ 79 (86)
T 2krk_A 68 HVTQEDFEMAVA 79 (86)
T ss_dssp EECHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 444444444443
No 411
>1s29_A LA protein; winged helix-turn-helix, autoantigen, RNA-binding, RNA binding protein; 1.60A {Trypanosoma brucei} SCOP: a.4.5.46
Probab=22.50 E-value=1e+02 Score=16.59 Aligned_cols=36 Identities=19% Similarity=0.358 Sum_probs=19.1
Q ss_pred hhcCCCCCCccHHHHHHHHHHhcCCCCCHHHHHHHHh
Q 032008 19 MIDKDSDGLITMKDLATVIQSAQDEHPRKEEVQEMIS 55 (149)
Q Consensus 19 ~~d~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~ 55 (149)
.+..+.+|+|+...+..+=+.- .+..+.+.+...++
T Consensus 36 ~m~~~~~G~Vpl~~i~sF~r~k-~lt~d~~~i~~al~ 71 (92)
T 1s29_A 36 KMAENAEGFVSLETLLTFKRVN-SVTTDVKEVVEAIR 71 (92)
T ss_dssp HHTTSTTCCEEHHHHTTSHHHH-TTCSCHHHHHHHHT
T ss_pred HhccCCCCCEEhHHHhCChhHH-HHcCCHHHHHHHHh
Confidence 3444667777777666533222 45555544544443
No 412
>3ip4_C Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: a.137.12.1 PDB: 2df4_C 2dqn_C* 2g5h_C 2g5i_C* 2f2a_C
Probab=21.78 E-value=1.1e+02 Score=16.65 Aligned_cols=28 Identities=25% Similarity=0.293 Sum_probs=19.7
Q ss_pred cccHHHHHHHHHHhCCCCCHHHHHHHHH
Q 032008 100 FISAAELRNVMMNLGERLSDEETEQMIR 127 (149)
Q Consensus 100 ~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 127 (149)
.|+.+++..+-+-....++++++..+..
T Consensus 3 ~i~~e~v~~iA~LArL~l~eeE~~~~~~ 30 (100)
T 3ip4_C 3 KVTREEVEHIANLARLQISPEETEEMAN 30 (100)
T ss_dssp CCCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 3677888888777777788777655533
No 413
>1dx7_A Light-harvesting protein B-875-beta chain; bacteriochlorophyll binding, membrane protein, photosynthesis; NMR {Rhodobacter sphaeroides} SCOP: f.3.1.1 PDB: 1jo5_A
Probab=21.70 E-value=64 Score=15.10 Aligned_cols=15 Identities=27% Similarity=0.565 Sum_probs=11.7
Q ss_pred hhhHHHHHHHHHHHh
Q 032008 4 ALTEDQIAEFQEAFC 18 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~ 18 (149)
.|+++|.+++..+|.
T Consensus 10 GLT~~EA~EfH~~~~ 24 (48)
T 1dx7_A 10 GLTDEQAQELHSVYM 24 (48)
T ss_dssp HHHHHHHHHHTHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 478888888887775
No 414
>3nph_B Phycobilisome 32.1 kDa linker polypeptide, phycoc associated, ROD 2; PFAM00427 domain, linker protein, phycobiliprotein, photosyn; 1.85A {Synechocystis SP} PDB: 2l3w_A
Probab=21.08 E-value=54 Score=19.52 Aligned_cols=14 Identities=21% Similarity=0.401 Sum_probs=10.7
Q ss_pred CCceeHHHHHHHHh
Q 032008 134 DGLVSFEEFARMMM 147 (149)
Q Consensus 134 ~g~i~~~ef~~~l~ 147 (149)
+|.||..||++.|-
T Consensus 47 nG~ItVReFVR~La 60 (148)
T 3nph_B 47 GREISVRDFVRAVA 60 (148)
T ss_dssp TTSSCHHHHHHHHH
T ss_pred cCCccHHHHHHHHH
Confidence 57788888888664
No 415
>1lgh_B LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=20.91 E-value=63 Score=14.89 Aligned_cols=15 Identities=27% Similarity=0.477 Sum_probs=11.3
Q ss_pred hhhHHHHHHHHHHHh
Q 032008 4 ALTEDQIAEFQEAFC 18 (149)
Q Consensus 4 ~l~~~~~~~l~~~f~ 18 (149)
.|+++|.+++.++|.
T Consensus 7 GLT~~EA~EfH~~~~ 21 (45)
T 1lgh_B 7 GLTEEEAIAVHDQFK 21 (45)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 477888888877765
No 416
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=20.82 E-value=1.6e+02 Score=18.19 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=27.5
Q ss_pred cccHHHHHHHHHHhCCCC-CHHHHHHHHHhhC
Q 032008 100 FISAAELRNVMMNLGERL-SDEETEQMIREAD 130 (149)
Q Consensus 100 ~i~~~e~~~~l~~~~~~~-~~~~~~~~~~~~d 130 (149)
.=|.+|+...|...|+.+ +++-+.+-++.+.
T Consensus 47 I~TQeEL~~~L~~~Gi~viTQATvSRDIkELg 78 (180)
T 3v4g_A 47 FGSQGEIVEALKQEGFENINQSKVSRMLTKFG 78 (180)
T ss_dssp CCSHHHHHHHHHHTTCTTCCHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHCCCcccCHHHHHHHHHHcC
Confidence 458899999999999998 9999999888875
No 417
>3kw6_A 26S protease regulatory subunit 8; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Homo sapiens}
Probab=20.80 E-value=94 Score=15.57 Aligned_cols=12 Identities=0% Similarity=0.230 Sum_probs=5.2
Q ss_pred cccHHHHHHHHH
Q 032008 100 FISAAELRNVMM 111 (149)
Q Consensus 100 ~i~~~e~~~~l~ 111 (149)
.|+.++|...+.
T Consensus 60 ~i~~~d~~~Al~ 71 (78)
T 3kw6_A 60 HVTQEDFEMAVA 71 (78)
T ss_dssp EECHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 344444444443
Done!