Your job contains 1 sequence.
>032009
MATSSSTQLENRPEEEDEMMFGAESGWVEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQH
PSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLNAQVIPQL
RPVYETAYILKFGEAPPIHIGEHPKVEDQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032009
(149 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|G8JYB7 - symbol:hda-6 "Protein HDA-6, isoform d... 244 1.0e-20 1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 244 1.9e-19 1
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 244 1.9e-19 1
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 244 1.9e-19 1
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 243 3.0e-19 1
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"... 240 6.6e-19 1
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 235 2.5e-18 1
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 235 2.5e-18 1
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 232 4.7e-18 1
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"... 228 1.3e-17 1
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 227 1.7e-17 1
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 224 3.4e-17 1
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 224 3.4e-17 1
DICTYBASE|DDB_G0283917 - symbol:sir2A "UBP-type zinc fing... 187 8.7e-14 1
UNIPROTKB|F8VRW0 - symbol:USP44 "Ubiquitin carboxyl-termi... 161 6.4e-12 1
UNIPROTKB|F8VVD6 - symbol:USP44 "Ubiquitin carboxyl-termi... 161 6.4e-12 1
UNIPROTKB|F8VRI7 - symbol:USP44 "Ubiquitin carboxyl-termi... 161 5.3e-11 1
UNIPROTKB|Q9H0E7 - symbol:USP44 "Ubiquitin carboxyl-termi... 161 9.5e-11 1
ZFIN|ZDB-GENE-040426-774 - symbol:usp44 "ubiquitin specif... 157 2.5e-10 1
UNIPROTKB|E2R0T7 - symbol:USP44 "Ubiquitin carboxyl-termi... 155 3.8e-10 1
UNIPROTKB|I3LA47 - symbol:USP44 "Ubiquitin carboxyl-termi... 155 4.1e-10 1
UNIPROTKB|E2R0W7 - symbol:USP44 "Ubiquitin carboxyl-termi... 155 4.2e-10 1
UNIPROTKB|F1P4C5 - symbol:USP44 "Ubiquitin carboxyl-termi... 155 4.2e-10 1
UNIPROTKB|E1BLZ0 - symbol:USP44 "Ubiquitin carboxyl-termi... 154 5.3e-10 1
UNIPROTKB|D2HBJ8 - symbol:USP44 "Ubiquitin carboxyl-termi... 154 5.3e-10 1
UNIPROTKB|Q0V9G5 - symbol:usp44 "Ubiquitin carboxyl-termi... 151 9.9e-10 1
UNIPROTKB|Q5XGZ2 - symbol:usp44-b "Ubiquitin carboxyl-ter... 151 1.1e-09 1
UNIPROTKB|Q6NTR6 - symbol:usp44-a "Ubiquitin carboxyl-ter... 151 1.1e-09 1
RGD|1308216 - symbol:Usp44 "ubiquitin specific peptidase ... 148 1.3e-09 1
DICTYBASE|DDB_G0270200 - symbol:DDB_G0270200 "BRCA1-assoc... 149 1.7e-09 1
TAIR|locus:2046951 - symbol:AT2G14830 species:3702 "Arabi... 146 1.9e-09 1
MGI|MGI:3045318 - symbol:Usp44 "ubiquitin specific peptid... 146 3.8e-09 1
UNIPROTKB|E1BGQ9 - symbol:USP49 "Ubiquitin carboxyl-termi... 144 5.9e-09 1
UNIPROTKB|I3LRM6 - symbol:I3LRM6 "Ubiquitin carboxyl-term... 143 6.7e-09 1
UNIPROTKB|E2RP15 - symbol:USP49 "Ubiquitin carboxyl-termi... 143 7.6e-09 1
UNIPROTKB|F1RUW2 - symbol:USP49 "Ubiquitin carboxyl-termi... 143 7.6e-09 1
MGI|MGI:2685391 - symbol:Usp49 "ubiquitin specific peptid... 142 9.8e-09 1
UNIPROTKB|I3L5N8 - symbol:BRAP "Uncharacterized protein" ... 130 1.2e-08 1
RGD|1310513 - symbol:Usp49 "ubiquitin specific peptidase ... 141 1.2e-08 1
UNIPROTKB|Q5T3E1 - symbol:USP49 "Ubiquitin carboxyl-termi... 140 1.3e-08 1
UNIPROTKB|Q70CQ1 - symbol:USP49 "Ubiquitin carboxyl-termi... 140 1.6e-08 1
DICTYBASE|DDB_G0268872 - symbol:DDB_G0268872 "putative ub... 145 1.8e-08 1
ZFIN|ZDB-GENE-050208-484 - symbol:usp49 "ubiquitin specif... 139 1.9e-08 1
WB|WBGene00013506 - symbol:usp-3 species:6239 "Caenorhabd... 138 1.9e-08 1
POMBASE|SPBC6B1.06c - symbol:ubp14 "ubiquitin C-terminal ... 136 5.1e-08 1
UNIPROTKB|F8VZK5 - symbol:BRAP "BRCA1-associated protein"... 130 5.6e-08 1
UNIPROTKB|B4DRM1 - symbol:BRAP "cDNA FLJ50182, highly sim... 130 8.7e-08 1
UNIPROTKB|F1NJH4 - symbol:BRAP "Uncharacterized protein" ... 130 1.4e-07 1
UNIPROTKB|B4DV65 - symbol:USP3 "cDNA FLJ60902, highly sim... 120 1.4e-07 1
UNIPROTKB|J3KNN7 - symbol:BRAP "BRCA1-associated protein"... 130 1.4e-07 1
ZFIN|ZDB-GENE-040718-168 - symbol:brap "BRCA1 associated ... 130 1.5e-07 1
UNIPROTKB|F1NR06 - symbol:BRAP "Uncharacterized protein" ... 130 1.5e-07 1
MGI|MGI:1919649 - symbol:Brap "BRCA1 associated protein" ... 130 1.5e-07 1
UNIPROTKB|A6H716 - symbol:BRAP "BRAP protein" species:991... 130 1.5e-07 1
UNIPROTKB|F1PGI5 - symbol:BRAP "Uncharacterized protein" ... 130 1.5e-07 1
UNIPROTKB|Q7Z569 - symbol:BRAP "BRCA1-associated protein"... 130 1.5e-07 1
FB|FBgn0038686 - symbol:CG5555 species:7227 "Drosophila m... 128 2.3e-07 1
SGD|S000001002 - symbol:ETP1 "Putative protein of unknown... 124 6.7e-07 1
ASPGD|ASPL0000042460 - symbol:AN10251 species:162425 "Eme... 123 6.9e-07 1
RGD|1308852 - symbol:Usp3 "ubiquitin specific peptidase 3... 123 7.2e-07 1
UNIPROTKB|I3LCU7 - symbol:I3LCU7 "Uncharacterized protein... 113 7.8e-07 1
CGD|CAL0005604 - symbol:orf19.1576 species:5476 "Candida ... 122 1.2e-06 1
UNIPROTKB|E2QZQ0 - symbol:USP3 "Ubiquitin carboxyl-termin... 120 1.5e-06 1
UNIPROTKB|Q9Y6I4 - symbol:USP3 "Ubiquitin carboxyl-termin... 120 1.5e-06 1
POMBASE|SPAC16E8.13 - symbol:SPAC16E8.13 "ubiquitin-prote... 120 1.6e-06 1
FB|FBgn0029763 - symbol:CG4165 species:7227 "Drosophila m... 123 2.0e-06 1
UNIPROTKB|G4MXB0 - symbol:MGG_08270 "Ubiquitin carboxyl-t... 120 2.7e-06 1
MGI|MGI:2152450 - symbol:Usp3 "ubiquitin specific peptida... 116 4.1e-06 1
ZFIN|ZDB-GENE-050227-1 - symbol:fbxl22 "F-box and leucine... 104 4.4e-06 2
UNIPROTKB|F1N0I6 - symbol:USP3 "Ubiquitin carboxyl-termin... 115 5.3e-06 1
WB|WBGene00017144 - symbol:EEED8.16 species:6239 "Caenorh... 114 8.0e-06 1
TAIR|locus:2060045 - symbol:BRIZ1 "AT2G42160" species:370... 110 1.6e-05 1
UNIPROTKB|H0YL81 - symbol:USP3 "Ubiquitin carboxyl-termin... 99 2.4e-05 1
UNIPROTKB|H0YMP6 - symbol:USP3 "Ubiquitin carboxyl-termin... 99 2.4e-05 1
UNIPROTKB|F1NQJ6 - symbol:USP3 "Ubiquitin carboxyl-termin... 108 5.9e-05 1
UNIPROTKB|J9P676 - symbol:USP45 "Ubiquitin carboxyl-termi... 107 0.00019 1
UNIPROTKB|E2QWZ1 - symbol:USP45 "Ubiquitin carboxyl-termi... 107 0.00020 1
UNIPROTKB|F1N2B1 - symbol:USP16 "Ubiquitin carboxyl-termi... 107 0.00021 1
UNIPROTKB|Q08DA3 - symbol:USP16 "Ubiquitin carboxyl-termi... 107 0.00021 1
UNIPROTKB|J9NW59 - symbol:USP33 "Ubiquitin carboxyl-termi... 107 0.00023 1
UNIPROTKB|F1P6Y2 - symbol:USP33 "Ubiquitin carboxyl-termi... 107 0.00024 1
UNIPROTKB|Q5ZMP4 - symbol:USP45 "Uncharacterized protein"... 102 0.00029 1
TAIR|locus:2057469 - symbol:BRIZ2 "AT2G26000" species:370... 105 0.00033 1
CGD|CAL0005412 - symbol:orf19.1516 species:5476 "Candida ... 106 0.00042 1
MGI|MGI:1921362 - symbol:Usp16 "ubiquitin specific peptid... 106 0.00044 1
UNIPROTKB|I3LMC2 - symbol:USP16 "Ubiquitin carboxyl-termi... 106 0.00044 1
UNIPROTKB|Q9Y5T5 - symbol:USP16 "Ubiquitin carboxyl-termi... 105 0.00067 1
UNIPROTKB|H0YNX9 - symbol:USP3 "Ubiquitin carboxyl-termin... 85 0.00072 1
>UNIPROTKB|G8JYB7 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform d" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 PANTHER:PTHR10625 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 GO:GO:0033558
RefSeq:NP_001255270.1 ProteinModelPortal:G8JYB7 SMR:G8JYB7
EnsemblMetazoa:F41H10.6d WormBase:F41H10.6d Uniprot:G8JYB7
Length = 138
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 52/136 (38%), Positives = 73/136 (53%)
Query: 2 ATSSSTQLENRPEEEDEMMFGAESGWVEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHP 61
++S S+ RP E+M + V PL +C HL A I T C+ CQ
Sbjct: 6 SSSGSSSSSTRPSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIG 64
Query: 62 SENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLR 121
+E W CL C + C RFVN+H + H+L ++H +ALS +DLSVWC+ CD+Y++ P L
Sbjct: 65 AEVWTCLTCYKYNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHN---PALI 121
Query: 122 PVYETAYILKFGEAPP 137
A+ KFGE P
Sbjct: 122 GAKSAAHESKFGETMP 137
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 244 (91.0 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 52/136 (38%), Positives = 73/136 (53%)
Query: 2 ATSSSTQLENRPEEEDEMMFGAESGWVEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHP 61
++S S+ RP E+M + V PL +C HL A I T C+ CQ
Sbjct: 823 SSSGSSSSSTRPSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIG 881
Query: 62 SENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLR 121
+E W CL C + C RFVN+H + H+L ++H +ALS +DLSVWC+ CD+Y++ P L
Sbjct: 882 AEVWTCLTCYKYNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHN---PALI 938
Query: 122 PVYETAYILKFGEAPP 137
A+ KFGE P
Sbjct: 939 GAKSAAHESKFGETMP 954
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 244 (91.0 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 52/136 (38%), Positives = 73/136 (53%)
Query: 2 ATSSSTQLENRPEEEDEMMFGAESGWVEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHP 61
++S S+ RP E+M + V PL +C HL A I T C+ CQ
Sbjct: 825 SSSGSSSSSTRPSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIG 883
Query: 62 SENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLR 121
+E W CL C + C RFVN+H + H+L ++H +ALS +DLSVWC+ CD+Y++ P L
Sbjct: 884 AEVWTCLTCYKYNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHN---PALI 940
Query: 122 PVYETAYILKFGEAPP 137
A+ KFGE P
Sbjct: 941 GAKSAAHESKFGETMP 956
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 244 (91.0 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 52/136 (38%), Positives = 73/136 (53%)
Query: 2 ATSSSTQLENRPEEEDEMMFGAESGWVEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHP 61
++S S+ RP E+M + V PL +C HL A I T C+ CQ
Sbjct: 825 SSSGSSSSSTRPSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIG 883
Query: 62 SENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLR 121
+E W CL C + C RFVN+H + H+L ++H +ALS +DLSVWC+ CD+Y++ P L
Sbjct: 884 AEVWTCLTCYKYNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHN---PALI 940
Query: 122 PVYETAYILKFGEAPP 137
A+ KFGE P
Sbjct: 941 GAKSAAHESKFGETMP 956
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 243 (90.6 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 46/112 (41%), Positives = 69/112 (61%)
Query: 28 VEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHY 87
V+PL C HL + I PC C +ENW+CL C +VLC R+VN+HM+ H
Sbjct: 973 VDPLPWCPHLESVRPVPAGGIDVFQ-PCEECGGEAENWICLFCYKVLCGRYVNQHMVTHG 1031
Query: 88 LETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLRPVYETAYILKFGEAPPIH 139
E+ H V LS++DLSVWC+ C++Y++ +V+ + + A+++KFGE IH
Sbjct: 1032 QESGHPVVLSFADLSVWCYACESYVHNKVLHEAK---NAAHLVKFGEG--IH 1078
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 240 (89.5 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 49/130 (37%), Positives = 71/130 (54%)
Query: 8 QLENRPEEEDEMMFGAESGWVEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHPSENWLC 67
Q+ + D+ MF A V PL C H+VA A + PC C ENW+C
Sbjct: 1006 QVFGNQADTDQAMFYA----VSPLLWCPHVVAVRPVPEAGLDVTQ-PCQDCGALQENWVC 1060
Query: 68 LCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLRPVYETA 127
L C +V C R++N HMLQH+ + H + LSY+DLS WC+ C AY++ + + ++ + A
Sbjct: 1061 LSCYQVCCGRYINAHMLQHHESSGHPMVLSYADLSTWCYPCQAYVHHEALLAVKNI---A 1117
Query: 128 YILKFGEAPP 137
+ KFGE P
Sbjct: 1118 HQNKFGEGVP 1127
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 235 (87.8 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 46/110 (41%), Positives = 62/110 (56%)
Query: 28 VEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHY 87
V PL C HLVA A + PC C ENW+CL C +V C R++N HMLQH+
Sbjct: 1107 VTPLPWCPHLVAVCPIPAAGLDVTQ-PCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHH 1165
Query: 88 LETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLRPVYETAYILKFGEAPP 137
+ H + LSY DLS WC+ C AY++ Q + ++ + A+ KFGE P
Sbjct: 1166 GNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKNI---AHQNKFGEDMP 1212
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 235 (87.8 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 46/110 (41%), Positives = 62/110 (56%)
Query: 28 VEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHY 87
V PL C HLVA A + PC C ENW+CL C +V C R++N HMLQH+
Sbjct: 1121 VTPLPWCPHLVAVCPIPAAGLDVTQ-PCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHH 1179
Query: 88 LETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLRPVYETAYILKFGEAPP 137
+ H + LSY DLS WC+ C AY++ Q + ++ + A+ KFGE P
Sbjct: 1180 GNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKNI---AHQNKFGEDMP 1226
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 232 (86.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 50/123 (40%), Positives = 66/123 (53%)
Query: 15 EEDEMMFGAESGWVEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVL 74
+ DE+MF A V PL C HL A + PC C ENW+CL C +V
Sbjct: 1011 DTDEVMFYA----VRPLLWCPHLAAVCPIPETGLNVTQ-PCQDCGTLQENWVCLSCYQVY 1065
Query: 75 CSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLRPVYETAYILKFGE 134
C R++N HMLQH+ + H + LSY+DLS WC+ C AY++ + L V A+ KFGE
Sbjct: 1066 CGRYINAHMLQHHEGSGHPLVLSYADLSAWCYHCQAYVHHK---DLLAVKNIAHQNKFGE 1122
Query: 135 APP 137
P
Sbjct: 1123 DIP 1125
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 228 (85.3 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 44/110 (40%), Positives = 63/110 (57%)
Query: 28 VEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHY 87
V PL C HLVA + + PC C ENW+CL C +V C R+++ HML H+
Sbjct: 1049 VTPLPWCPHLVAVCPIPESGLDVTQ-PCQDCGVLQENWVCLSCYQVYCGRYISAHMLHHH 1107
Query: 88 LETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLRPVYETAYILKFGEAPP 137
++ H + LSY DLS WC+ C+AY++ Q + ++ V A+ KFGE P
Sbjct: 1108 EDSGHPLVLSYVDLSTWCYNCEAYVHHQALLDVKNV---AHQNKFGEDMP 1154
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 227 (85.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 46/113 (40%), Positives = 63/113 (55%)
Query: 28 VEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHY 87
V PL+ C HL+A A + PC C ENW+CL C +V CSR+VN HM+ H+
Sbjct: 1047 VTPLSWCPHLMAVCPIPAAGLDVSQ-PCKTCGSVQENWVCLTCYQVYCSRYVNAHMVCHH 1105
Query: 88 LETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLRPVYETAYILKFGEAPPIHI 140
+ H + LS DLS WC+ C AY++ + L+ V A+ KFGE P H+
Sbjct: 1106 EASEHPLVLSCVDLSTWCYLCQAYVHHE---DLQDVKNAAHQNKFGEGMP-HL 1154
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 224 (83.9 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 46/127 (36%), Positives = 65/127 (51%)
Query: 3 TSSSTQLENRPEEEDEMMFGAESGWVEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHPS 62
T S EN+ E MF V PL +C HL + C+ C
Sbjct: 970 TLSDYLAENKEALEQSEMFA-----VYPLKTCPHLRLLRPEEAPRSLDSGAECSVCGSTG 1024
Query: 63 ENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLN-AQVIPQLR 121
ENW+CL C+ V C R+VN HM QH +E H +A+S +DLSVWC+ C AY++ ++ L
Sbjct: 1025 ENWVCLSCRHVACGRYVNAHMEQHSVEEQHPLAMSTADLSVWCYACSAYVDHPRLYAYLN 1084
Query: 122 PVYETAY 128
P++E +
Sbjct: 1085 PLHEDKF 1091
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 224 (83.9 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 45/110 (40%), Positives = 61/110 (55%)
Query: 28 VEPLTSCDHLVASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHY 87
V PL+ C HL+A A + PC C ENW+CL C +V CSR+VN HM+ H+
Sbjct: 1041 VTPLSWCPHLMAVCPIPAAGLDVSQ-PCKTCGTVQENWVCLTCYQVYCSRYVNAHMVCHH 1099
Query: 88 LETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLRPVYETAYILKFGEAPP 137
+ H + LS DLS WC+ C AY++ + L+ V A+ KFGE P
Sbjct: 1100 EASEHPLVLSCVDLSTWCYVCQAYVHHE---DLQDVKNAAHQNKFGEDMP 1146
>DICTYBASE|DDB_G0283917 [details] [associations]
symbol:sir2A "UBP-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0070403 "NAD+
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001607
InterPro:IPR003000 Pfam:PF02146 Pfam:PF02148 PROSITE:PS50271
dictyBase:DDB_G0283917 GenomeReviews:CM000153_GR GO:GO:0070403
GO:GO:0046872 GO:GO:0008270 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AAFI02000058 eggNOG:COG0846
Gene3D:3.30.1600.10 InterPro:IPR026591 InterPro:IPR026590
PANTHER:PTHR11085 PROSITE:PS50305 RefSeq:XP_638798.1
ProteinModelPortal:Q54QE6 SMR:Q54QE6 EnsemblProtists:DDB0216430
GeneID:8624322 KEGG:ddi:DDB_G0283917 InParanoid:Q54QE6 KO:K11412
OMA:CNDESEN Uniprot:Q54QE6
Length = 512
Score = 187 (70.9 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 53 TPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYL 112
T C+ C SENW+C+ C V CSR VN H +H+ T H ++ S+SD S WC+TCD Y+
Sbjct: 32 TKCHACNDESENWICMTCGVVSCSRHVNGHAGEHFENTKHPISASFSDHSFWCYTCDTYV 91
Query: 113 N 113
+
Sbjct: 92 H 92
>UNIPROTKB|F8VRW0 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018475 HGNC:HGNC:20064 IPI:IPI01022557
ProteinModelPortal:F8VRW0 SMR:F8VRW0 Ensembl:ENST00000551837
ArrayExpress:F8VRW0 Bgee:F8VRW0 Uniprot:F8VRW0
Length = 164
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 31/103 (30%), Positives = 52/103 (50%)
Query: 31 LTSCDHL-VASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ +C H+ L+ D + + C C W CL C V C R++ +H L+H+ E
Sbjct: 4 MDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
++H VAL +++ V+C+ CD Y LN L+ + T +K
Sbjct: 64 SSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106
>UNIPROTKB|F8VVD6 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018475 HGNC:HGNC:20064 IPI:IPI01021117
ProteinModelPortal:F8VVD6 SMR:F8VVD6 Ensembl:ENST00000549639
ArrayExpress:F8VVD6 Bgee:F8VVD6 Uniprot:F8VVD6
Length = 111
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 31/103 (30%), Positives = 52/103 (50%)
Query: 31 LTSCDHL-VASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ +C H+ L+ D + + C C W CL C V C R++ +H L+H+ E
Sbjct: 4 MDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
++H VAL +++ V+C+ CD Y LN L+ + T +K
Sbjct: 64 SSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106
>UNIPROTKB|F8VRI7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AC018475 HGNC:HGNC:20064
IPI:IPI01022768 ProteinModelPortal:F8VRI7 SMR:F8VRI7
Ensembl:ENST00000552440 ArrayExpress:F8VRI7 Bgee:F8VRI7
Uniprot:F8VRI7
Length = 496
Score = 161 (61.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 31/103 (30%), Positives = 52/103 (50%)
Query: 31 LTSCDHL-VASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ +C H+ L+ D + + C C W CL C V C R++ +H L+H+ E
Sbjct: 4 MDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
++H VAL +++ V+C+ CD Y LN L+ + T +K
Sbjct: 64 SSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106
>UNIPROTKB|Q9H0E7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IMP] [GO:0090231 "regulation of spindle
checkpoint" evidence=IMP] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0090266 "regulation of mitotic cell cycle spindle assembly
checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5077 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 OMA:AIKSQNY HOVERGEN:HBG018027
EMBL:AL136825 EMBL:AK315697 EMBL:AC018475 EMBL:BC030704
IPI:IPI00030306 RefSeq:NP_001035862.1 RefSeq:NP_115523.2
UniGene:Hs.646421 ProteinModelPortal:Q9H0E7 SMR:Q9H0E7
IntAct:Q9H0E7 STRING:Q9H0E7 MEROPS:C19.057 PhosphoSite:Q9H0E7
DMDM:300669621 PaxDb:Q9H0E7 PRIDE:Q9H0E7 DNASU:84101
Ensembl:ENST00000258499 Ensembl:ENST00000393091
Ensembl:ENST00000537435 GeneID:84101 KEGG:hsa:84101 UCSC:uc001teg.3
GeneCards:GC12M095910 H-InvDB:HIX0010895 HGNC:HGNC:20064
HPA:HPA026543 MIM:610993 neXtProt:NX_Q9H0E7 PharmGKB:PA134931457
InParanoid:Q9H0E7 OrthoDB:EOG4XGZZK PhylomeDB:Q9H0E7
GenomeRNAi:84101 NextBio:73349 ArrayExpress:Q9H0E7 Bgee:Q9H0E7
CleanEx:HS_USP44 Genevestigator:Q9H0E7 GermOnline:ENSG00000136014
Uniprot:Q9H0E7
Length = 712
Score = 161 (61.7 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 31/103 (30%), Positives = 52/103 (50%)
Query: 31 LTSCDHL-VASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ +C H+ L+ D + + C C W CL C V C R++ +H L+H+ E
Sbjct: 4 MDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
++H VAL +++ V+C+ CD Y LN L+ + T +K
Sbjct: 64 SSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106
>ZFIN|ZDB-GENE-040426-774 [details] [associations]
symbol:usp44 "ubiquitin specific peptidase 44"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0051322 "anaphase" evidence=ISS] [GO:0090231 "regulation of
spindle checkpoint" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 ZFIN:ZDB-GENE-040426-774 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0021551 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 CTD:84101 HOGENOM:HOG000015084 KO:K11834
EMBL:BC048060 IPI:IPI00512839 RefSeq:NP_956551.1 UniGene:Dr.78996
ProteinModelPortal:Q7ZUM8 MEROPS:C19.073 PRIDE:Q7ZUM8 GeneID:393227
KEGG:dre:393227 HOVERGEN:HBG018027 InParanoid:Q7ZUM8
NextBio:20814291 ArrayExpress:Q7ZUM8 Uniprot:Q7ZUM8
Length = 695
Score = 157 (60.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 34 CDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+ L+ D + + C C W CL C V C R++ +H LQH+ E +H
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALQHFKEQHH 63
Query: 93 SVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
+AL ++L V+C+ CD Y LN L+ + T +K
Sbjct: 64 PLALEVNELYVYCYLCDDYVLNDNATGDLKLLRSTLSAIK 103
>UNIPROTKB|E2R0T7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 EMBL:AAEX03009951
Ensembl:ENSCAFT00000010306 Uniprot:E2R0T7
Length = 668
Score = 155 (59.6 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 31 LTSCDHL-VASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ C H+ L+ D + + C C W CL C V C R++ +H L+H+ E
Sbjct: 4 MDKCKHIGQLQLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLR 121
++H VAL +++ V+C+ CD Y LN L+
Sbjct: 64 SSHPVALEVNEMYVFCYLCDDYVLNDNATGDLK 96
>UNIPROTKB|I3LA47 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0090266 "regulation of mitotic cell
cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
GeneTree:ENSGT00690000101718 KO:K11834 OMA:AIKSQNY EMBL:FP340372
RefSeq:XP_003126758.2 Ensembl:ENSSSCT00000025589 GeneID:100516911
KEGG:ssc:100516911 Uniprot:I3LA47
Length = 709
Score = 155 (59.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 31 LTSCDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ C H+ L+ D + + C C W CL C V C R++ +H L+H+ E
Sbjct: 4 MDKCKHIGRLQLAHDHSILNPQKWHCVDCNTTESIWACLSCPHVACGRYIEEHALKHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
++H VAL +++ V+C+ CD Y LN L+ + T +K
Sbjct: 64 SSHPVALEVNEMYVFCYFCDDYVLNDNATGDLKLLRSTLSAIK 106
>UNIPROTKB|E2R0W7 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0090266 "regulation of
mitotic cell cycle spindle assembly checkpoint" evidence=IEA]
[GO:0060564 "negative regulation of mitotic anaphase-promoting
complex activity" evidence=IEA] [GO:0051322 "anaphase"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
OMA:AIKSQNY EMBL:AAEX03009951 RefSeq:XP_532654.1
ProteinModelPortal:E2R0W7 Ensembl:ENSCAFT00000010298 GeneID:475430
KEGG:cfa:475430 NextBio:20851273 Uniprot:E2R0W7
Length = 711
Score = 155 (59.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 31 LTSCDHL-VASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ C H+ L+ D + + C C W CL C V C R++ +H L+H+ E
Sbjct: 4 MDKCKHIGQLQLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLR 121
++H VAL +++ V+C+ CD Y LN L+
Sbjct: 64 SSHPVALEVNEMYVFCYLCDDYVLNDNATGDLK 96
>UNIPROTKB|F1P4C5 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051322 "anaphase" evidence=IEA] [GO:0060564 "negative
regulation of mitotic anaphase-promoting complex activity"
evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 EMBL:AADN02005945
IPI:IPI00600923 Ensembl:ENSGALT00000018595 Uniprot:F1P4C5
Length = 717
Score = 155 (59.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 31 LTSCDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ C H+ L+ D + + C C W CL C V C R++ +H L+H+ E
Sbjct: 4 MDKCKHIGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALKHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
H VAL ++L V+C+ CD Y LN ++ + T +K
Sbjct: 64 NGHPVALEVNELYVFCYLCDDYVLNDNATGDIKLLRSTLSAIK 106
>UNIPROTKB|E1BLZ0 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0090266 "regulation of mitotic cell
cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834 OMA:AIKSQNY
EMBL:DAAA02012807 IPI:IPI00703062 RefSeq:NP_001192766.1
UniGene:Bt.36835 PRIDE:E1BLZ0 Ensembl:ENSBTAT00000026571
GeneID:517022 KEGG:bta:517022 NextBio:20872356 Uniprot:E1BLZ0
Length = 709
Score = 154 (59.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 31 LTSCDHL-VASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ C H+ L+ D + C C W CL C V C R++ +H L H+ E
Sbjct: 4 MDKCQHIGQLRLAQDHPILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALGHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
++H VAL +++ V+C+ CD Y LN L+ + T +K
Sbjct: 64 SSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRSTLSAIK 106
>UNIPROTKB|D2HBJ8 [details] [associations]
symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:9646 "Ailuropoda melanoleuca" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051322 "anaphase"
evidence=ISS] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=ISS] [GO:0090231
"regulation of spindle checkpoint" evidence=ISS] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
GO:GO:0051322 GO:GO:0060564 GeneTree:ENSGT00690000101718
EMBL:GL192660 RefSeq:XP_002919284.1 Ensembl:ENSAMET00000002387
GeneID:100470180 KEGG:aml:100470180 CTD:84101 HOGENOM:HOG000015084
KO:K11834 OMA:AIKSQNY Uniprot:D2HBJ8
Length = 711
Score = 154 (59.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 31 LTSCDHL-VASLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ C H+ L+ D + + C C W CL C V C R++ +H L+H+ E
Sbjct: 4 MDKCKHIGQLRLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQE 63
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLR 121
++H VAL +++ V+C+ CD Y LN L+
Sbjct: 64 SSHPVALEVNEMYVFCYLCDDYVLNDNATGDLK 96
>UNIPROTKB|Q0V9G5 [details] [associations]
symbol:usp44 "Ubiquitin carboxyl-terminal hydrolase 44"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0051322 "anaphase" evidence=ISS] [GO:0060564
"negative regulation of mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0090231 "regulation of spindle
checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0090231
eggNOG:COG5533 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 EMBL:BC121579
RefSeq:NP_001072389.1 UniGene:Str.5094 ProteinModelPortal:Q0V9G5
GeneID:779843 KEGG:xtr:779843 Xenbase:XB-GENE-1014112
Uniprot:Q0V9G5
Length = 652
Score = 151 (58.2 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 31 LTSCDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ C H+ L+ D + + C C W CL C V C R++ +H L+H+ +
Sbjct: 1 MDKCKHVGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQD 60
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
+ H +AL ++L V+C+ CD Y LN L+ + T +K
Sbjct: 61 SKHPLALEVNELYVFCYLCDDYVLNDNTTGDLKLLRSTLSAIK 103
>UNIPROTKB|Q5XGZ2 [details] [associations]
symbol:usp44-b "Ubiquitin carboxyl-terminal hydrolase 44-B"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC084285
RefSeq:NP_001088277.1 UniGene:Xl.49566 ProteinModelPortal:Q5XGZ2
GeneID:495110 KEGG:xla:495110 CTD:495110 Xenbase:XB-GENE-6254317
Uniprot:Q5XGZ2
Length = 690
Score = 151 (58.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 31 LTSCDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ C H+ L+ D + + C C W CL C V C R++ +H L+H+ +
Sbjct: 1 MDKCKHVGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQD 60
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
+ H +AL ++L V+C+ CD Y LN L+ + T +K
Sbjct: 61 SKHPLALEVNELYVFCYLCDDYVLNDNTTGDLKLLRSTLSAIK 103
>UNIPROTKB|Q6NTR6 [details] [associations]
symbol:usp44-a "Ubiquitin carboxyl-terminal hydrolase 44-A"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0060564 "negative regulation of
mitotic anaphase-promoting complex activity" evidence=ISS]
[GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC068889
RefSeq:NP_001084641.1 UniGene:Xl.6668 ProteinModelPortal:Q6NTR6
GeneID:414600 KEGG:xla:414600 CTD:414600 Xenbase:XB-GENE-1014118
Uniprot:Q6NTR6
Length = 690
Score = 151 (58.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 31 LTSCDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE 89
+ C H+ L+ D + + C C W CL C V C R++ +H L+H+ +
Sbjct: 1 MDKCKHVGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQD 60
Query: 90 TNHSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILK 131
+ H +AL ++L V+C+ CD Y LN L+ + T +K
Sbjct: 61 SKHPLALEVNELYVFCYLCDDYVLNDNTTGDLKLLRSTLSAIK 103
>RGD|1308216 [details] [associations]
symbol:Usp44 "ubiquitin specific peptidase 44" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051322 "anaphase"
evidence=IEA] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=IEA] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 RGD:1308216
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0090231 EMBL:CH473960 GO:GO:0051322
GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
OrthoDB:EOG4XGZZK IPI:IPI00870073 RefSeq:NP_001101553.1
UniGene:Rn.64954 Ensembl:ENSRNOT00000007465 GeneID:314746
KEGG:rno:314746 UCSC:RGD:1308216 NextBio:668165 Uniprot:D4A251
Length = 481
Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 55 CNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAY-LN 113
C C W CL C V C +++ +H L+H+ E++H VA +D+ V+C+ C+ Y LN
Sbjct: 26 CMVCNTTESIWACLSCSHVACGQYIQEHALKHFEESSHPVAFEVNDMYVFCYLCNDYVLN 85
Query: 114 AQVIPQLRPVYETAYILKFGEAPP 137
L+ + T +K G++ P
Sbjct: 86 DNTAGDLKSLRSTLSAIK-GKSYP 108
>DICTYBASE|DDB_G0270200 [details] [associations]
symbol:DDB_G0270200 "BRCA1-associated protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184
SMART:SM00290 dictyBase:DDB_G0270200 EMBL:AAFI02000005
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG272422 KO:K10632 InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 OMA:CLDRLDS RefSeq:XP_646613.1
ProteinModelPortal:Q55C68 EnsemblProtists:DDB0190874 GeneID:8617585
KEGG:ddi:DDB_G0270200 InParanoid:Q55C68 ProtClustDB:CLSZ2497295
Uniprot:Q55C68
Length = 687
Score = 149 (57.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 55 CNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLN 113
C+ CQ W+C+ C +V CSR+VN H QHY ET H+ AL VW + D Y++
Sbjct: 441 CSTCQSTESLWICIICGQVGCSRYVNSHANQHYQETMHTFALELETQRVWDYAGDGYVH 499
>TAIR|locus:2046951 [details] [associations]
symbol:AT2G14830 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004705 InterPro:IPR005061
Pfam:PF03398 IPI:IPI00520833 PIR:T02593 RefSeq:NP_179090.1
UniGene:At.40489 ProteinModelPortal:O80969 SMR:O80969
EnsemblPlants:AT2G14830.1 GeneID:815971 KEGG:ath:AT2G14830
TAIR:At2g14830 eggNOG:NOG259124 HOGENOM:HOG000115150
InParanoid:O80969 OMA:KAMHVHP PhylomeDB:O80969
ProtClustDB:CLSN2683466 ArrayExpress:O80969 Genevestigator:O80969
Uniprot:O80969
Length = 454
Score = 146 (56.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 2 ATSSSTQLENRPEEEDEMMFGAESGWVEPLTSCDHLVASLSSDLAHIPTPDTPCNR 57
++SSS+ + +E + + GA SGWVE +CDHL +LS DL H+PTPDTPC+R
Sbjct: 8 SSSSSSPPKEVADETQDWILGAGSGWVEARKTCDHL-NTLSPDLLHLPTPDTPCSR 62
>MGI|MGI:3045318 [details] [associations]
symbol:Usp44 "ubiquitin specific peptidase 44" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051322 "anaphase"
evidence=ISO] [GO:0060564 "negative regulation of mitotic
anaphase-promoting complex activity" evidence=ISO] [GO:0090231
"regulation of spindle checkpoint" evidence=ISO] [GO:0090266
"regulation of mitotic cell cycle spindle assembly checkpoint"
evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS50271
MGI:MGI:3045318 GO:GO:0005634 GO:GO:0043161 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0090266 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0051322 GO:GO:0060564 CTD:84101
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
EMBL:AK088109 EMBL:CJ236846 EMBL:AC124686 EMBL:BC111886
IPI:IPI00224757 RefSeq:NP_001193780.1 UniGene:Mm.276331
ProteinModelPortal:Q8C2S0 SMR:Q8C2S0 STRING:Q8C2S0
PhosphoSite:Q8C2S0 GeneID:327799 KEGG:mmu:327799 UCSC:uc011xlw.1
eggNOG:KOG1867 InParanoid:Q8C2S0 NextBio:397964 Bgee:Q8C2S0
Genevestigator:Q8C2S0 Uniprot:Q8C2S0
Length = 711
Score = 146 (56.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 34 CDHLVASLSSDLAH-IPTPDT-PCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETN 91
C H V L H I P C C W CL C V C +++ +H L+H+ E++
Sbjct: 4 CKH-VEQLQLAQGHSILDPQKWYCMVCNTTESIWACLSCSHVACGKYIQEHALKHFQESS 62
Query: 92 HSVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILKFGEAP 136
H VA +D+ +C+ C+ Y LN L+ + T +K + P
Sbjct: 63 HPVAFEVNDMYAFCYLCNDYVLNDNAAGDLKSLRSTLSTIKSKKYP 108
>UNIPROTKB|E1BGQ9 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862
OMA:VRGQKQD EMBL:DAAA02055061 IPI:IPI00716640 RefSeq:XP_002697284.1
RefSeq:XP_595518.4 ProteinModelPortal:E1BGQ9
Ensembl:ENSBTAT00000011820 GeneID:517349 KEGG:bta:517349
NextBio:20872416 Uniprot:E1BGQ9
Length = 683
Score = 144 (55.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 33/112 (29%), Positives = 52/112 (46%)
Query: 34 CDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+ L+ D + + C C W CL C V C R++ H L+H+ ET H
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWYCRECATTESVWACLKCSHVACGRYIEDHALKHFEETRH 63
Query: 93 SVALSYSDLSVWCFTCDAY-LNAQVIPQLRPVYETAYILKFGEA--PPIHIG 141
+A+ DL V+C+ C Y LN L+ + + ++ G+ PP+ G
Sbjct: 64 PLAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVR-GQTQDPPLRRG 114
>UNIPROTKB|I3LRM6 [details] [associations]
symbol:I3LRM6 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:VRGQKQD EMBL:CU468691
Ensembl:ENSSSCT00000023974 Uniprot:I3LRM6
Length = 628
Score = 143 (55.4 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 34 CDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+ L+ D + + C C W CL C V C R++ H L+H+ ET H
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63
Query: 93 SVALSYSDLSVWCFTCDAYL 112
+A+ DL V+C+ C Y+
Sbjct: 64 PLAMEVRDLYVFCYLCKDYV 83
>UNIPROTKB|E2RP15 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 OMA:VRGQKQD
EMBL:AAEX03008323 RefSeq:XP_532134.3 Ensembl:ENSCAFT00000002525
GeneID:474899 KEGG:cfa:474899 NextBio:20850836 Uniprot:E2RP15
Length = 681
Score = 143 (55.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 34 CDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+ L+ D + + C C W CL C V C R++ H L+H+ ET H
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63
Query: 93 SVALSYSDLSVWCFTCDAYL 112
+A+ DL V+C+ C Y+
Sbjct: 64 PLAMEVRDLYVFCYLCKDYV 83
>UNIPROTKB|F1RUW2 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 EMBL:CU914409
RefSeq:XP_003128438.3 Ensembl:ENSSSCT00000001812 GeneID:100520499
KEGG:ssc:100520499 OMA:INCKISE Uniprot:F1RUW2
Length = 682
Score = 143 (55.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 34 CDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+ L+ D + + C C W CL C V C R++ H L+H+ ET H
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63
Query: 93 SVALSYSDLSVWCFTCDAYL 112
+A+ DL V+C+ C Y+
Sbjct: 64 PLAMEVRDLYVFCYLCKDYV 83
>MGI|MGI:2685391 [details] [associations]
symbol:Usp49 "ubiquitin specific peptidase 49" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 MGI:MGI:2685391 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 UniGene:Mm.59393
GeneTree:ENSGT00690000101718 HOGENOM:HOG000015084 KO:K11834
MEROPS:C19.073 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK CTD:25862
OMA:VRGQKQD EMBL:BC060712 IPI:IPI00420459 RefSeq:NP_940813.1
ProteinModelPortal:Q6P9L4 SMR:Q6P9L4 STRING:Q6P9L4
PhosphoSite:Q6P9L4 PRIDE:Q6P9L4 Ensembl:ENSMUST00000024779
GeneID:224836 KEGG:mmu:224836 UCSC:uc008cvv.1 InParanoid:Q6P9L4
NextBio:377415 Bgee:Q6P9L4 CleanEx:MM_USP49 Genevestigator:Q6P9L4
GermOnline:ENSMUSG00000023984 Uniprot:Q6P9L4
Length = 685
Score = 142 (55.0 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 34 CDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+ L+ D + + C +C W CL C V C R++ H L+H+ ET H
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWCCLQCATTESAWACLKCSHVACGRYIEDHALKHFEETGH 63
Query: 93 SVALSYSDLSVWCFTCDAYL 112
+A+ DL V+C+ C Y+
Sbjct: 64 PLAMEVRDLYVFCYLCKDYV 83
>UNIPROTKB|I3L5N8 [details] [associations]
symbol:BRAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00500000044909 Ensembl:ENSSSCT00000027806 OMA:GVENDEK
Uniprot:I3L5N8
Length = 185
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 56 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 115
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 116 DNYVHRLV 123
>RGD|1310513 [details] [associations]
symbol:Usp49 "ubiquitin specific peptidase 49" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
RGD:1310513 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834
OrthoDB:EOG4XGZZK CTD:25862 OMA:VRGQKQD EMBL:AC129162
IPI:IPI00371730 RefSeq:NP_001129942.1 UniGene:Rn.147913
Ensembl:ENSRNOT00000018550 GeneID:316211 KEGG:rno:316211
UCSC:RGD:1310513 NextBio:670532 Uniprot:D3ZJ49
Length = 685
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 34 CDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+ L+ D + + C C W CL C V C R++ H L+H+ ET H
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWCCLECATTESAWACLKCSHVACGRYIEDHALKHFEETGH 63
Query: 93 SVALSYSDLSVWCFTCDAYL 112
+A+ DL V+C+ C Y+
Sbjct: 64 PLAMEVRDLYVFCYLCKDYV 83
>UNIPROTKB|Q5T3E1 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
EMBL:AL160163 EMBL:AL365205 HOGENOM:HOG000015084 HOVERGEN:HBG018027
UniGene:Hs.665742 HGNC:HGNC:20078 IPI:IPI00639902 SMR:Q5T3E1
STRING:Q5T3E1 Ensembl:ENST00000373010 Uniprot:Q5T3E1
Length = 585
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 34 CDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+ L+ D + + C C W CL C V C R++ H L+H+ ET H
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63
Query: 93 SVALSYSDLSVWCFTCDAYL 112
+A+ DL V+C+ C Y+
Sbjct: 64 PLAMEVRDLYVFCYLCKDYV 83
>UNIPROTKB|Q70CQ1 [details] [associations]
symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
GO:GO:0005634 GO:GO:0005737 EMBL:CH471081 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 EMBL:AL365205
HOGENOM:HOG000015084 KO:K11834 MEROPS:C19.073 HOVERGEN:HBG018027
OrthoDB:EOG4XGZZK EMBL:AJ586139 EMBL:BC014176 IPI:IPI00156871
IPI:IPI00455818 RefSeq:NP_061031.2 UniGene:Hs.665742
ProteinModelPortal:Q70CQ1 SMR:Q70CQ1 IntAct:Q70CQ1 STRING:Q70CQ1
PhosphoSite:Q70CQ1 DMDM:52000871 PaxDb:Q70CQ1 PRIDE:Q70CQ1
DNASU:25862 Ensembl:ENST00000297229 Ensembl:ENST00000373006
Ensembl:ENST00000373009 Ensembl:ENST00000394253 GeneID:25862
KEGG:hsa:25862 UCSC:uc003ori.3 CTD:25862 GeneCards:GC06M041762
H-InvDB:HIX0164985 HGNC:HGNC:20078 HPA:HPA030254 HPA:HPA030255
neXtProt:NX_Q70CQ1 PharmGKB:PA134954570 InParanoid:Q70CQ1
OMA:VRGQKQD GenomeRNAi:25862 NextBio:47231 ArrayExpress:Q70CQ1
Bgee:Q70CQ1 CleanEx:HS_USP49 Genevestigator:Q70CQ1
GermOnline:ENSG00000164663 Uniprot:Q70CQ1
Length = 688
Score = 140 (54.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 34 CDHLVA-SLSSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+ L+ D + + C C W CL C V C R++ H L+H+ ET H
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63
Query: 93 SVALSYSDLSVWCFTCDAYL 112
+A+ DL V+C+ C Y+
Sbjct: 64 PLAMEVRDLYVFCYLCKDYV 83
>DICTYBASE|DDB_G0268872 [details] [associations]
symbol:DDB_G0268872 "putative ubiquitin
carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 dictyBase:DDB_G0268872 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 EMBL:AAFI02000004 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5560
RefSeq:XP_647029.1 ProteinModelPortal:Q55EJ1
EnsemblProtists:DDB0237744 GeneID:8616724 KEGG:ddi:DDB_G0268872
Uniprot:Q55EJ1
Length = 2125
Score = 145 (56.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 17 DEMMFGAESGWVEPLTS--CDHLV----ASLSSDLAHIPTPDTPCNRCQHPSENWLCLCC 70
D+++ G E+G++ ++ C HL S++ L++ P + C C + +LCL C
Sbjct: 899 DDLIIGVENGYINIYSTERCPHLTHLRYESINEKLSN-PN-EWKCTDCHYTHPLFLCLTC 956
Query: 71 KEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYL 112
++ C F +KH+ HY +NH + D +CF C ++
Sbjct: 957 NKITCGTFKHKHVSAHYKSSNHPLVFGIKDKFCYCFICKKFV 998
>ZFIN|ZDB-GENE-050208-484 [details] [associations]
symbol:usp49 "ubiquitin specific peptidase 49"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
ZFIN:ZDB-GENE-050208-484 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
eggNOG:COG5077 EMBL:AL645789 GeneTree:ENSGT00690000101718
HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
CTD:25862 OMA:VRGQKQD EMBL:BC171546 EMBL:BC171548 IPI:IPI00503837
RefSeq:NP_001038361.1 UniGene:Dr.13979 Ensembl:ENSDART00000037069
GeneID:559473 KEGG:dre:559473 InParanoid:Q1MTK1 NextBio:20882985
Uniprot:Q1MTK1
Length = 649
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 30/90 (33%), Positives = 40/90 (44%)
Query: 34 CDHLVASLSSDLAHIPTPDT-PCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H+V I P C C W CL C V C R++ +H HY +T H
Sbjct: 4 CKHVVRFRLGHGHSILNPQMWRCVDCDTTESVWACLKCTHVACGRYMEEHSRSHYQQTQH 63
Query: 93 SVALSYSDLSVWCFTCDAY-LNAQVIPQLR 121
+A+ +L V+CF C Y LN V L+
Sbjct: 64 PLAMDVRELDVFCFACGDYVLNDNVEGDLK 93
>WB|WBGene00013506 [details] [associations]
symbol:usp-3 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004221 EMBL:AL132902 GeneTree:ENSGT00690000102047
MEROPS:C19.026 RefSeq:NP_493434.3 ProteinModelPortal:Q9GRV2
SMR:Q9GRV2 PaxDb:Q9GRV2 EnsemblMetazoa:Y71A12B.9 GeneID:190579
KEGG:cel:CELE_Y71A12B.9 UCSC:Y71A12B.9 CTD:190579
WormBase:Y71A12B.9 HOGENOM:HOG000020065 NextBio:946258
Uniprot:Q9GRV2
Length = 550
Score = 138 (53.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 27/97 (27%), Positives = 50/97 (51%)
Query: 53 TPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYL 112
T C+ C + +++ +CL C +LC R + H L H+ ET+H V + ++C++CD +
Sbjct: 51 TFCDECDNCNKSLMCLTCGRILCGRNDSGHALHHFEETSHPVVIDCISFELYCYSCDDEV 110
Query: 113 NAQVIPQLRPVYETAYILKFGEAPPIHIGEHPKVEDQ 149
+ P L V ++ +L F + G+ P + Q
Sbjct: 111 SLDFEPSLYGVLKSLKLL-FDREDVMEGGDGPTIPAQ 146
>POMBASE|SPBC6B1.06c [details] [associations]
symbol:ubp14 "ubiquitin C-terminal hydrolase Ubp14"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 PomBase:SPBC6B1.06c GO:GO:0005654 GO:GO:0043161
GO:GO:0046872 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
GO:GO:0008270 GenomeReviews:CU329671_GR InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 EMBL:D83659 KO:K11836 eggNOG:COG5207
HOGENOM:HOG000162311 OMA:DDMVEDP PIR:T40647 RefSeq:NP_596085.1
ProteinModelPortal:Q11119 STRING:Q11119 MEROPS:C19.A65
EnsemblFungi:SPBC6B1.06c.1 GeneID:2541157 KEGG:spo:SPBC6B1.06c
OrthoDB:EOG470XRN NextBio:20802270 Uniprot:Q11119
Length = 775
Score = 136 (52.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 25 SGWVEPLTSCDHLVASLSSDLAHIPTPDTP-CNRCQHPSENWLCLCCKEVLCSRFV---- 79
+ W LT+CDH++ +L + ++ D C++C W+CL C + C R
Sbjct: 144 TAWENELTTCDHII-NLPENETYVTNLDNATCSKCDLAENLWMCLTCGALSCGRKQYGGG 202
Query: 80 --NKHMLQHYLETNHSVALSYSDLS------VWCFTCD 109
N H L HY +T H +A+ +S ++C++CD
Sbjct: 203 GGNGHALSHYDDTGHPLAVKLKSISPDGQADIYCYSCD 240
>UNIPROTKB|F8VZK5 [details] [associations]
symbol:BRAP "BRCA1-associated protein" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0046872 GO:GO:0008270 EMBL:AC002996 Gene3D:3.30.40.10
InterPro:IPR013083 HGNC:HGNC:1099 ChiTaRS:BRAP InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 EMBL:AC137055 IPI:IPI01022318
ProteinModelPortal:F8VZK5 SMR:F8VZK5 Ensembl:ENST00000547043
ArrayExpress:F8VZK5 Bgee:F8VZK5 Uniprot:F8VZK5
Length = 328
Score = 130 (50.8 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 93 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 152
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 153 DNYVHRLV 160
>UNIPROTKB|B4DRM1 [details] [associations]
symbol:BRAP "cDNA FLJ50182, highly similar to
BRCA1-associated protein (EC 6.3.2.-)" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 EMBL:AC002996 Gene3D:3.30.40.10 InterPro:IPR013083
UniGene:Hs.530940 HGNC:HGNC:1099 HOVERGEN:HBG050729 ChiTaRS:BRAP
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
HOGENOM:HOG000190616 EMBL:AC137055 EMBL:AK299326 IPI:IPI00908635
SMR:B4DRM1 STRING:B4DRM1 Ensembl:ENST00000539060 UCSC:uc010syh.2
Uniprot:B4DRM1
Length = 413
Score = 130 (50.8 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 132 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 191
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 192 DNYVHRLV 199
>UNIPROTKB|F1NJH4 [details] [associations]
symbol:BRAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 GeneTree:ENSGT00500000044909
EMBL:AADN02034921 IPI:IPI00810579 Ensembl:ENSGALT00000007407
ArrayExpress:F1NJH4 Uniprot:F1NJH4
Length = 556
Score = 130 (50.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 276 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 335
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 336 DNYVHRLV 343
>UNIPROTKB|B4DV65 [details] [associations]
symbol:USP3 "cDNA FLJ60902, highly similar to Ubiquitin
carboxyl-terminal hydrolase 3 (EC 3.1.2.15)" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 GO:GO:0008270 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC118274 EMBL:AC007950 UniGene:Hs.458499
HGNC:HGNC:12626 ChiTaRS:USP3 EMBL:AK300948 IPI:IPI01009992
SMR:B4DV65 STRING:B4DV65 Ensembl:ENST00000536001 Uniprot:B4DV65
Length = 156
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 34 CDHLVAS--LSSDLAHIP--TPDT-PCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYL 88
C HL +S ++ D A P +P + C+ C+ W+CL C V C R+VN H +HY
Sbjct: 3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62
Query: 89 E-----TNH-----------SVALSYSDLSVWCFTCDAYL 112
+ TNH +V + S S +C+ CD ++
Sbjct: 63 DAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFV 102
>UNIPROTKB|J3KNN7 [details] [associations]
symbol:BRAP "BRCA1-associated protein" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
EMBL:AC002996 Gene3D:3.30.40.10 InterPro:IPR013083 HGNC:HGNC:1099
ChiTaRS:BRAP InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
EMBL:AC137055 ProteinModelPortal:J3KNN7 Ensembl:ENST00000327551
Uniprot:J3KNN7
Length = 562
Score = 130 (50.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 281 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 340
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 341 DNYVHRLV 348
>ZFIN|ZDB-GENE-040718-168 [details] [associations]
symbol:brap "BRCA1 associated protein" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001607
InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290
ZFIN:ZDB-GENE-040718-168 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 Gene3D:3.30.40.10 InterPro:IPR013083 CTD:8315
eggNOG:NOG272422 HOVERGEN:HBG050729 KO:K10632 OrthoDB:EOG4HHP1Z
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
HOGENOM:HOG000190616 EMBL:BC076350 IPI:IPI00491025
RefSeq:NP_001002466.1 UniGene:Dr.80255 ProteinModelPortal:Q6DGJ4
STRING:Q6DGJ4 PRIDE:Q6DGJ4 GeneID:436739 KEGG:dre:436739
InParanoid:Q6DGJ4 NextBio:20831178 ArrayExpress:Q6DGJ4 Bgee:Q6DGJ4
Uniprot:Q6DGJ4
Length = 578
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 295 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 354
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 355 DNYVHRLV 362
>UNIPROTKB|F1NR06 [details] [associations]
symbol:BRAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000165 "MAPK cascade" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0008139 "nuclear
localization sequence binding" evidence=IEA] [GO:0009968 "negative
regulation of signal transduction" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0005737 GO:GO:0000165 GO:GO:0007265 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0009968
OMA:CLQRWED GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 GeneTree:ENSGT00500000044909 EMBL:AADN02034921
IPI:IPI00820070 Ensembl:ENSGALT00000039032 ArrayExpress:F1NR06
Uniprot:F1NR06
Length = 585
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 305 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 364
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 365 DNYVHRLV 372
>MGI|MGI:1919649 [details] [associations]
symbol:Brap "BRCA1 associated protein" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0000165 "MAPK cascade" evidence=ISO] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0007265 "Ras protein signal transduction" evidence=ISO]
[GO:0008139 "nuclear localization sequence binding" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009968 "negative
regulation of signal transduction" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001607
InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 UniPathway:UPA00143
MGI:MGI:1919649 Prosite:PS00518 GO:GO:0005737 GO:GO:0000165
GO:GO:0007265 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GO:GO:0009968 CTD:8315 eggNOG:NOG272422
HOVERGEN:HBG050729 KO:K10632 OMA:CLQRWED OrthoDB:EOG4HHP1Z
GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
EMBL:AF321920 EMBL:AF321921 EMBL:BC038490 EMBL:AK013885
EMBL:AK034212 IPI:IPI00117933 IPI:IPI00453542 IPI:IPI00453543
RefSeq:NP_082503.2 UniGene:Mm.153372 ProteinModelPortal:Q99MP8
SMR:Q99MP8 STRING:Q99MP8 PhosphoSite:Q99MP8 PaxDb:Q99MP8
PRIDE:Q99MP8 Ensembl:ENSMUST00000031414 Ensembl:ENSMUST00000111765
Ensembl:ENSMUST00000127703 GeneID:72399 KEGG:mmu:72399
UCSC:uc008zkc.1 UCSC:uc008zkd.1 GeneTree:ENSGT00500000044909
HOGENOM:HOG000190616 InParanoid:Q99MP8 NextBio:336190 Bgee:Q99MP8
CleanEx:MM_BRAP Genevestigator:Q99MP8 GermOnline:ENSMUSG00000029458
Uniprot:Q99MP8
Length = 591
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 310 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 369
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 370 DNYVHRLV 377
>UNIPROTKB|A6H716 [details] [associations]
symbol:BRAP "BRAP protein" species:9913 "Bos taurus"
[GO:0009968 "negative regulation of signal transduction"
evidence=IEA] [GO:0008139 "nuclear localization sequence binding"
evidence=IEA] [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000165 "MAPK
cascade" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
GO:GO:0005737 GO:GO:0000165 GO:GO:0007265 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0009968
CTD:8315 eggNOG:NOG272422 HOVERGEN:HBG050729 KO:K10632 OMA:CLQRWED
OrthoDB:EOG4HHP1Z GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 GeneTree:ENSGT00500000044909 HOGENOM:HOG000190616
EMBL:DAAA02045293 EMBL:BC146079 IPI:IPI00854454
RefSeq:NP_001092478.1 UniGene:Bt.103041 STRING:A6H716
Ensembl:ENSBTAT00000001552 GeneID:518844 KEGG:bta:518844
InParanoid:A6H716 NextBio:20872746 Uniprot:A6H716
Length = 592
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 311 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 370
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 371 DNYVHRLV 378
>UNIPROTKB|F1PGI5 [details] [associations]
symbol:BRAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0009968 "negative regulation of signal
transduction" evidence=IEA] [GO:0008139 "nuclear localization
sequence binding" evidence=IEA] [GO:0007265 "Ras protein signal
transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000165 "MAPK cascade" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001607 InterPro:IPR012677
Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271
SMART:SM00184 SMART:SM00290 GO:GO:0005737 GO:GO:0000165
GO:GO:0007265 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GO:GO:0009968 CTD:8315 KO:K10632
OMA:CLQRWED GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 GeneTree:ENSGT00500000044909 EMBL:AAEX03014674
RefSeq:XP_543397.3 Ensembl:ENSCAFT00000013670 GeneID:486271
KEGG:cfa:486271 Uniprot:F1PGI5
Length = 592
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 311 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 370
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 371 DNYVHRLV 378
>UNIPROTKB|Q7Z569 [details] [associations]
symbol:BRAP "BRCA1-associated protein" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009968 "negative regulation
of signal transduction" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=IDA] [GO:0007265
"Ras protein signal transduction" evidence=IDA] [GO:0008139
"nuclear localization sequence binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0000165
GO:GO:0007265 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 EMBL:CH471054 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0009968
EMBL:AF035620 EMBL:AY332222 EMBL:BC136698 EMBL:BC136699
EMBL:AF035950 IPI:IPI00396089 RefSeq:NP_006759.3 UniGene:Hs.530940
ProteinModelPortal:Q7Z569 SMR:Q7Z569 IntAct:Q7Z569 STRING:Q7Z569
PhosphoSite:Q7Z569 DMDM:296434410 PaxDb:Q7Z569 PRIDE:Q7Z569
Ensembl:ENST00000419234 GeneID:8315 KEGG:hsa:8315 UCSC:uc001tsn.4
CTD:8315 GeneCards:GC12M112080 H-InvDB:HIX0036684 HGNC:HGNC:1099
HPA:HPA040357 MIM:604986 neXtProt:NX_Q7Z569 PharmGKB:PA25410
eggNOG:NOG272422 HOVERGEN:HBG050729 InParanoid:Q7Z569 KO:K10632
OMA:CLQRWED OrthoDB:EOG4HHP1Z PhylomeDB:Q7Z569 ChiTaRS:BRAP
GenomeRNAi:8315 NextBio:31141 ArrayExpress:Q7Z569 Bgee:Q7Z569
CleanEx:HS_BRAP Genevestigator:Q7Z569 GermOnline:ENSG00000089234
GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
Uniprot:Q7Z569
Length = 592
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 49 PTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTC 108
P + C C W+CL C + C R+V++H +H+ ET H+ A+ ++ VW +
Sbjct: 311 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 370
Query: 109 DAYLNAQV 116
D Y++ V
Sbjct: 371 DNYVHRLV 378
>FB|FBgn0038686 [details] [associations]
symbol:CG5555 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K10632 OMA:CLQRWED InterPro:IPR011422 Pfam:PF07576
ProDom:PD017029 GeneTree:ENSGT00500000044909 eggNOG:COG5207
EMBL:AY047557 RefSeq:NP_650789.1 UniGene:Dm.4649 SMR:Q9VDZ1
IntAct:Q9VDZ1 MINT:MINT-759759 STRING:Q9VDZ1
EnsemblMetazoa:FBtr0083746 GeneID:42302 KEGG:dme:Dmel_CG5555
UCSC:CG5555-RA FlyBase:FBgn0038686 InParanoid:Q9VDZ1
OrthoDB:EOG4R7SS3 GenomeRNAi:42302 NextBio:828132 Uniprot:Q9VDZ1
Length = 555
Score = 128 (50.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 47 HIPTP----DTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLS 102
H+ TP D+ C C+ W+CL C V C R+ H H+ TNH+ A+ S
Sbjct: 289 HVQTPGLVEDSVCMECEGTDSLWICLICGHVGCGRYQGGHAAAHFRATNHTFAMQLGTSS 348
Query: 103 VWCFTCDAYLN 113
VW + D +++
Sbjct: 349 VWDYAGDNFVH 359
>SGD|S000001002 [details] [associations]
symbol:ETP1 "Putative protein of unknown function required
for growth on ethanol" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=IMP] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008139 "nuclear
localization sequence binding" evidence=IDA] [GO:0043130 "ubiquitin
binding" evidence=IDA] InterPro:IPR001841 InterPro:IPR001607
Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271
SMART:SM00184 SMART:SM00290 SGD:S000001002 Prosite:PS00518
GO:GO:0005737 GO:GO:0045471 GO:GO:0046872 EMBL:BK006934
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:U11582
GO:GO:0043130 eggNOG:NOG272422 KO:K10632 GO:GO:0008139
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
GeneTree:ENSGT00500000044909 HOGENOM:HOG000190616 OrthoDB:EOG4H75M9
EMBL:AY558115 PIR:S46825 RefSeq:NP_011853.1
ProteinModelPortal:P38748 SMR:P38748 DIP:DIP-2987N IntAct:P38748
MINT:MINT-436947 STRING:P38748 EnsemblFungi:YHL010C GeneID:856376
KEGG:sce:YHL010C CYGD:YHL010c OMA:CDHSFQC NextBio:981864
Genevestigator:P38748 GermOnline:YHL010C Uniprot:P38748
Length = 585
Score = 124 (48.7 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 27/84 (32%), Positives = 38/84 (45%)
Query: 34 CDHLVASLSSDLAHIPTPDTP-CNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNH 92
C H LS + D+ C C W+CL C V C R+ +KH ++HY ET H
Sbjct: 279 CRHSSLRLSRESLLKQAGDSAHCATCGSTDNLWICLICGNVGCGRYNSKHAIKHYEETLH 338
Query: 93 SVALSYSDLSVWCFTCDAYLNAQV 116
A+ VW + D Y++ V
Sbjct: 339 CFAMDIRTQRVWDYAGDNYVHRLV 362
>ASPGD|ASPL0000042460 [details] [associations]
symbol:AN10251 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0008139 "nuclear localization sequence binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045471 "response
to ethanol" evidence=IEA] InterPro:IPR001841 InterPro:IPR001607
Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271
SMART:SM00184 SMART:SM00290 GO:GO:0046872 EMBL:BN001307
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
HOGENOM:HOG000190616 EnsemblFungi:CADANIAT00008666 OMA:AHAFAHY
Uniprot:C8VLC6
Length = 503
Score = 123 (48.4 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 55 CNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLN 113
C+ C W+CL C V C R+ H HY +T+H+ A+ S VW + DAY++
Sbjct: 234 CSVCHSDVNLWVCLICGNVGCGRYDGAHAFAHYSQTSHAFAMDLSTQRVWDYIGDAYVH 292
>RGD|1308852 [details] [associations]
symbol:Usp3 "ubiquitin specific peptidase 3" species:10116
"Rattus norvegicus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISO] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0016578 "histone deubiquitination"
evidence=ISO] [GO:0031647 "regulation of protein stability"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 RGD:1308852 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 MEROPS:C19.026 CTD:9960
HOVERGEN:HBG103589 KO:K11986 IPI:IPI00366664 EMBL:DQ076481
RefSeq:NP_001020595.1 UniGene:Rn.164920 ProteinModelPortal:Q4JL29
GeneID:363084 KEGG:rno:363084 UCSC:RGD:1308852 NextBio:682386
Genevestigator:Q4JL29 Uniprot:Q4JL29
Length = 520
Score = 123 (48.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 30/100 (30%), Positives = 47/100 (47%)
Query: 34 CDHLVAS--LSSDLAHIP--TPDT-PCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYL 88
C HL +S ++ D A P +P + C+ C+ W+CL C VLC R+VN H +HY
Sbjct: 3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVLCGRYVNGHAKKHYE 62
Query: 89 ETN----------------HSVALSYSDLSVWCFTCDAYL 112
+ H+V + S S +C+ CD ++
Sbjct: 63 DAQIPLLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 102
>UNIPROTKB|I3LCU7 [details] [associations]
symbol:I3LCU7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CU914208
Ensembl:ENSSSCT00000028774 Uniprot:I3LCU7
Length = 95
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 28/89 (31%), Positives = 41/89 (46%)
Query: 34 CDHLVAS--LSSDLAHIP--TPDT-PCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYL 88
C HL +S ++ D A P +P + C+ C+ W+CL C V C R+VN H +HY
Sbjct: 3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62
Query: 89 E-----TNHSVALSYSDLS-VWCFTCDAY 111
+ TNH + C C +Y
Sbjct: 63 DAQIPLTNHKKSEKQEKAQHTVCMDCSSY 91
>CGD|CAL0005604 [details] [associations]
symbol:orf19.1576 species:5476 "Candida albicans" [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0008139 "nuclear localization
sequence binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 CGD:CAL0005604
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AACQ01000008 EMBL:AACQ01000007 eggNOG:NOG272422 KO:K10632
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029 RefSeq:XP_722477.1
RefSeq:XP_722618.1 ProteinModelPortal:Q5ALK2 STRING:Q5ALK2
GeneID:3635818 GeneID:3635931 KEGG:cal:CaO19.1576
KEGG:cal:CaO19.9149 Uniprot:Q5ALK2
Length = 622
Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 55 CNRCQHPSENWLCLCCKEVLCSRFV-NKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLN 113
C C W+CL C + CSR+ +H L+H+++T H A+ + VW + D Y++
Sbjct: 329 CMECDETENLWICLICGNIGCSRYAPEQHSLKHFVDTGHCFAMEIATSRVWDYAGDKYVH 388
Query: 114 AQV 116
V
Sbjct: 389 RLV 391
>UNIPROTKB|E2QZQ0 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0042393 "histone binding"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
GeneTree:ENSGT00690000102047 CTD:9960 KO:K11986 OMA:DCLRSFT
EMBL:AAEX03016202 EMBL:AAEX03016201 RefSeq:XP_544715.3
Ensembl:ENSCAFT00000026918 GeneID:487590 KEGG:cfa:487590
NextBio:20861160 Uniprot:E2QZQ0
Length = 520
Score = 120 (47.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 34 CDHLVAS--LSSDLAHIP--TPDT-PCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYL 88
C HL +S ++ D A P +P + C+ C+ W+CL C V C R+VN H +HY
Sbjct: 3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62
Query: 89 E-----TNH-----------SVALSYSDLSVWCFTCDAYL 112
+ TNH +V + S S +C+ CD ++
Sbjct: 63 DAQVPLTNHKKSEKQDKPQHTVCMDCSSYSTYCYRCDDFV 102
>UNIPROTKB|Q9Y6I4 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0042393 "histone binding" evidence=IPI]
[GO:0016578 "histone deubiquitination" evidence=IDA] [GO:0031647
"regulation of protein stability" evidence=IDA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0004843
"ubiquitin-specific protease activity" evidence=TAS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0031647 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 EMBL:CH471082 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5533
EMBL:AC118274 HOGENOM:HOG000231498 EMBL:AF073344 EMBL:BT007269
EMBL:AK301236 EMBL:AC007950 EMBL:BC018113 EMBL:BC065300
EMBL:BC107137 EMBL:BC107138 IPI:IPI00002330 IPI:IPI01008797
RefSeq:NP_001243631.1 RefSeq:NP_006528.2 UniGene:Hs.458499
ProteinModelPortal:Q9Y6I4 SMR:Q9Y6I4 IntAct:Q9Y6I4 STRING:Q9Y6I4
MEROPS:C19.026 PhosphoSite:Q9Y6I4 PaxDb:Q9Y6I4 PRIDE:Q9Y6I4
DNASU:9960 Ensembl:ENST00000380324 Ensembl:ENST00000540797
GeneID:9960 KEGG:hsa:9960 UCSC:uc002amf.3 CTD:9960
GeneCards:GC15P063796 H-InvDB:HIX0012328 HGNC:HGNC:12626 MIM:604728
neXtProt:NX_Q9Y6I4 PharmGKB:PA37251 HOVERGEN:HBG103589
InParanoid:Q9Y6I4 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
ChiTaRS:USP3 GenomeRNAi:9960 NextBio:37582 ArrayExpress:Q9Y6I4
Bgee:Q9Y6I4 CleanEx:HS_USP3 Genevestigator:Q9Y6I4
GermOnline:ENSG00000140455 Uniprot:Q9Y6I4
Length = 520
Score = 120 (47.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 34 CDHLVAS--LSSDLAHIP--TPDT-PCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYL 88
C HL +S ++ D A P +P + C+ C+ W+CL C V C R+VN H +HY
Sbjct: 3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62
Query: 89 E-----TNH-----------SVALSYSDLSVWCFTCDAYL 112
+ TNH +V + S S +C+ CD ++
Sbjct: 63 DAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFV 102
>POMBASE|SPAC16E8.13 [details] [associations]
symbol:SPAC16E8.13 "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005829
"cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
PomBase:SPAC16E8.13 Prosite:PS00518 GO:GO:0005829 EMBL:CU329670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:NOG272422 KO:K10632 InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 HOGENOM:HOG000190616 PIR:T37793
RefSeq:NP_594226.1 ProteinModelPortal:O13747 STRING:O13747
EnsemblFungi:SPAC16E8.13.1 GeneID:2542333 KEGG:spo:SPAC16E8.13
OMA:CLDRLDS OrthoDB:EOG4H75M9 NextBio:20803394 Uniprot:O13747
Length = 547
Score = 120 (47.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 55 CNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLN 113
C C + + W+CL C + C R+ + H QHY++T H A+ VW + D Y++
Sbjct: 262 CTVCCYDKDLWICLICGNIGCGRYHDAHAKQHYVDTAHCYAMELETQRVWDYAGDNYVH 320
>FB|FBgn0029763 [details] [associations]
symbol:CG4165 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 EMBL:AE014298
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 KO:K11844
GeneTree:ENSGT00690000102047 EMBL:AY051846 RefSeq:NP_572220.1
RefSeq:NP_726993.1 RefSeq:NP_726994.1 RefSeq:NP_726995.1
UniGene:Dm.7220 SMR:Q9W4C3 MINT:MINT-901982
EnsemblMetazoa:FBtr0070772 EnsemblMetazoa:FBtr0070773
EnsemblMetazoa:FBtr0070774 EnsemblMetazoa:FBtr0070775 GeneID:31458
KEGG:dme:Dmel_CG4165 UCSC:CG4165-RA FlyBase:FBgn0029763
InParanoid:Q9W4C3 OMA:GLLYECS OrthoDB:EOG476HF7 GenomeRNAi:31458
NextBio:773741 Uniprot:Q9W4C3
Length = 1126
Score = 123 (48.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 65 WLCLCCKEVLCSRFVNKHMLQHYL---ETNHSVALSYSDLSVWCFTCDAYLNAQVIPQLR 121
WLCL C LC R +KH L+HY +H++A++ +WC+ CD + + + L
Sbjct: 109 WLCLKCGSQLCGRARHKHALEHYQTPHSDSHALAMNTRSFDIWCYECDMKICSNLRKNLL 168
Query: 122 PVYETAYILKFGEAPP 137
E + K + PP
Sbjct: 169 ECVEL--VKKLAQKPP 182
>UNIPROTKB|G4MXB0 [details] [associations]
symbol:MGG_08270 "Ubiquitin carboxyl-terminal hydrolase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000449
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR009060
InterPro:IPR016652 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00627
Pfam:PF02148 PIRSF:PIRSF016308 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:CM001232 SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221 KO:K11836
RefSeq:XP_003715815.1 ProteinModelPortal:G4MXB0
EnsemblFungi:MGG_08270T0 GeneID:2678560 KEGG:mgr:MGG_08270
Uniprot:G4MXB0
Length = 787
Score = 120 (47.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 27 WVEPLTSCDHLVASLSSDLAHIPTPDT-PCNRCQHPSENWLCLCCKEVLCSRFV------ 79
W + LTSC+H++ + I + + C++C WLCL C + C R
Sbjct: 145 WEQELTSCEHILTLQQDEPRQIASNELGTCSKCDLNENLWLCLQCGALGCGRAQFGGVSG 204
Query: 80 NKHMLQHYLETNHSVALSYSDLS------VWCFTCD 109
+ H L H E+ H VA+ ++ V+C++CD
Sbjct: 205 HSHALAHATESGHGVAVKLGSITPEGTADVYCYSCD 240
>MGI|MGI:2152450 [details] [associations]
symbol:Usp3 "ubiquitin specific peptidase 3" species:10090
"Mus musculus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016578 "histone deubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031647 "regulation of
protein stability" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2152450 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5560
HOGENOM:HOG000231498 GeneTree:ENSGT00690000102047 MEROPS:C19.026
CTD:9960 HOVERGEN:HBG103589 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
EMBL:AK031141 EMBL:BC017156 IPI:IPI00127231 RefSeq:NP_659186.1
UniGene:Mm.38976 ProteinModelPortal:Q91W36 SMR:Q91W36
PhosphoSite:Q91W36 PaxDb:Q91W36 PRIDE:Q91W36
Ensembl:ENSMUST00000127569 GeneID:235441 KEGG:mmu:235441
UCSC:uc009qey.1 InParanoid:Q91W36 NextBio:382674 Bgee:Q91W36
CleanEx:MM_USP3 Genevestigator:Q91W36 GermOnline:ENSMUSG00000032376
Uniprot:Q91W36
Length = 520
Score = 116 (45.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 29/100 (29%), Positives = 46/100 (46%)
Query: 34 CDHLVAS--LSSDLAHIP--TPDT-PCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYL 88
C HL +S ++ D A P +P + C+ C+ W+CL C V C R+VN H +HY
Sbjct: 3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62
Query: 89 ETN----------------HSVALSYSDLSVWCFTCDAYL 112
+ H+V + S S +C+ CD ++
Sbjct: 63 DAQIPLLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 102
>ZFIN|ZDB-GENE-050227-1 [details] [associations]
symbol:fbxl22 "F-box and leucine-rich repeat protein
22" species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 ZFIN:ZDB-GENE-050227-1
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00390000003748 EMBL:CR391977 IPI:IPI00495297
Ensembl:ENSDART00000088884 Bgee:E7FC36 Uniprot:E7FC36
Length = 527
Score = 104 (41.7 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 34 CDHLVAS--LSSDLAHIP--TPDT-PCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYL 88
C HL +S ++ DL P +P + C+ C+ W+CL C V C R+VN H +H+
Sbjct: 3 CPHLNSSVCMTVDLTRFPNGSPSSWCCSVCRSNKSPWVCLTCMNVHCGRYVNGHAKKHFE 62
Query: 89 E 89
E
Sbjct: 63 E 63
Score = 50 (22.7 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 92 HSVALSYSDLSVWCFTCDAYL 112
HSV + + S +C+ CD ++
Sbjct: 86 HSVCMDCNSYSTFCYKCDEFV 106
>UNIPROTKB|F1N0I6 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0042393 "histone binding"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
GeneTree:ENSGT00690000102047 OMA:DCLRSFT EMBL:DAAA02028746
IPI:IPI00715279 Ensembl:ENSBTAT00000011598 Uniprot:F1N0I6
Length = 521
Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 34 CDHLVAS--LSSDLAHIP--TPDTPCNR--CQHPSENWLCLCCKEVLCSRFVNKHMLQHY 87
C HL +S ++ D A P +P + C C+ W+CL C V C R+VN H +HY
Sbjct: 3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSAVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHY 62
Query: 88 LE-----TNH-----------SVALSYSDLSVWCFTCDAYL 112
+ TNH +V + S S +C+ CD ++
Sbjct: 63 EDAQIPLTNHKKSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 103
>WB|WBGene00017144 [details] [associations]
symbol:EEED8.16 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50271 SMART:SM00184 SMART:SM00290 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG272422 KO:K10632 OMA:CLQRWED InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 GeneTree:ENSGT00500000044909
HOGENOM:HOG000190616 EMBL:FO081042 RefSeq:NP_495016.1
ProteinModelPortal:Q95QN6 SMR:Q95QN6 DIP:DIP-24711N IntAct:Q95QN6
MINT:MINT-1123262 STRING:Q95QN6 PaxDb:Q95QN6
EnsemblMetazoa:EEED8.16.1 EnsemblMetazoa:EEED8.16.2 GeneID:173917
KEGG:cel:CELE_EEED8.16 UCSC:EEED8.16 CTD:173917 WormBase:EEED8.16
InParanoid:Q95QN6 NextBio:881657 Uniprot:Q95QN6
Length = 590
Score = 114 (45.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 55 CNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLN 113
CN C ++ W+CL C + C R+ +H +H+ T+H+ +L VW + D Y++
Sbjct: 310 CNDCGMSNDLWICLICGNIGCGRYAEQHAQRHWELTSHTYSLKVGGERVWDYAGDNYVH 368
>TAIR|locus:2060045 [details] [associations]
symbol:BRIZ1 "AT2G42160" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IC] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010029 "regulation of seed germination"
evidence=IMP] [GO:0046982 "protein heterodimerization activity"
evidence=IDA] InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
EMBL:CP002685 GO:GO:0046872 GO:GO:0008270 GO:GO:0016787
GO:GO:0046982 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029
GO:GO:0004842 GO:GO:0000151 KO:K10632 InterPro:IPR011422
Pfam:PF07576 ProDom:PD017029 OMA:CDHSFQC EMBL:HQ127733
IPI:IPI00541428 RefSeq:NP_181746.2 UniGene:At.42743
UniGene:At.42745 ProteinModelPortal:E5KGE0 SMR:E5KGE0 PRIDE:E5KGE0
EnsemblPlants:AT2G42160.1 GeneID:818816 KEGG:ath:AT2G42160
Uniprot:E5KGE0
Length = 488
Score = 110 (43.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 55 CNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLN 113
C+ C W CL C V C R+ H ++H+ ET+H +L +W + D+Y++
Sbjct: 225 CSICGKTENVWACLVCGFVGCGRYKEGHSIRHWKETHHCYSLDLRTQQIWDYVGDSYVH 283
>UNIPROTKB|H0YL81 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC118274
EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3 Ensembl:ENST00000559771
Bgee:H0YL81 Uniprot:H0YL81
Length = 126
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 58 CQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE-----TNH-----------SVALSYSDL 101
C+ W+CL C V C R+VN H +HY + TNH +V + S
Sbjct: 10 CRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCSSY 69
Query: 102 SVWCFTCDAYL 112
S +C+ CD ++
Sbjct: 70 STYCYRCDDFV 80
>UNIPROTKB|H0YMP6 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC118274
EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3 Ensembl:ENST00000561442
Bgee:H0YMP6 Uniprot:H0YMP6
Length = 132
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 42 SSDLAHIPTPDTPCNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE-----TNH---- 92
SS+L + C+ W+CL C V C R+VN H +HY + TNH
Sbjct: 47 SSNLPASASQSVGTTVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSE 106
Query: 93 -------SVALSYSDLSVWCFTCDAY 111
+V + S S +C+ CD +
Sbjct: 107 KQDKVQHTVCMDCSSYSTYCYRCDDF 132
>UNIPROTKB|F1NQJ6 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0008234 GO:GO:0031647 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0016578
GO:GO:0004221 GO:GO:0000278 GeneTree:ENSGT00690000102047
OMA:DCLRSFT EMBL:AADN02040443 IPI:IPI00579359
Ensembl:ENSGALT00000005420 Uniprot:F1NQJ6
Length = 521
Score = 108 (43.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 51 PDTPCNR-CQHPSENWLCLCCKEVLCSRFVNKHMLQHYLE-----TNH-----------S 93
P + CN C+ W+CL C V C R+VN H +HY + TNH +
Sbjct: 23 PSSFCNSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQEKVQHT 82
Query: 94 VALSYSDLSVWCFTCDAYL 112
V + S S +C+ CD ++
Sbjct: 83 VCMDCSSYSTYCYRCDDFV 101
>UNIPROTKB|J9P676 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 KO:K11844 GeneTree:ENSGT00690000102047
CTD:85015 EMBL:AAEX03008557 RefSeq:XP_539054.3
Ensembl:ENSCAFT00000045531 GeneID:481933 KEGG:cfa:481933
Uniprot:J9P676
Length = 778
Score = 107 (42.7 bits), Expect = 0.00019, P = 0.00019
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 61 PSENWLCLCCKEVLCSR-FVNKHMLQHYLET---NHSVALSYSDLSVWCFTCDAYLN 113
PS+ WLCL C C R N H L+HY +H + +S S +WC+ CD L+
Sbjct: 79 PSDVWLCLKCGFQGCGRNSENHHSLRHYKSRRTESHCITISLSTWVIWCYECDEKLS 135
>UNIPROTKB|E2QWZ1 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000102047
OMA:CEEKCET EMBL:AAEX03008557 Ensembl:ENSCAFT00000005638
Uniprot:E2QWZ1
Length = 798
Score = 107 (42.7 bits), Expect = 0.00020, P = 0.00020
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 61 PSENWLCLCCKEVLCSR-FVNKHMLQHYLET---NHSVALSYSDLSVWCFTCDAYLN 113
PS+ WLCL C C R N H L+HY +H + +S S +WC+ CD L+
Sbjct: 79 PSDVWLCLKCGFQGCGRNSENHHSLRHYKSRRTESHCITISLSTWVIWCYECDEKLS 135
>UNIPROTKB|F1N2B1 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0045901 "positive regulation
of translational elongation" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0045893 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004197 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 IPI:IPI00706867 UniGene:Bt.51616
GeneTree:ENSGT00690000102047 OMA:CKNVAEE EMBL:DAAA02000173
EMBL:DAAA02000172 Ensembl:ENSBTAT00000026801 Uniprot:F1N2B1
Length = 826
Score = 107 (42.7 bits), Expect = 0.00021, P = 0.00021
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 59 QHPSENWLCLCCKEVLCSR-FVNKHMLQHYLETN---HSVALSYSDLSVWCFTCDA---Y 111
++PS WLCL C C R +H L+HY++ H + LS + SVWC+ CD Y
Sbjct: 67 ENPSV-WLCLKCGHQGCGRNSQEQHALKHYMKPRSEPHCLVLSLDNWSVWCYLCDDEVHY 125
Query: 112 LNAQVIPQL 120
N+ + Q+
Sbjct: 126 CNSNRLGQV 134
>UNIPROTKB|Q08DA3 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase 16"
species:9913 "Bos taurus" [GO:0051289 "protein homotetramerization"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS] [GO:0016578 "histone deubiquitination" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0043130 "ubiquitin binding"
evidence=ISS] [GO:0007067 "mitosis" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0051301 "cell division"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0045893 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003713 GO:GO:0051289
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0042393
GO:GO:0043130 GO:GO:0004197 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 eggNOG:COG5207 EMBL:BC123861 IPI:IPI00706867
RefSeq:NP_001070335.1 UniGene:Bt.51616 ProteinModelPortal:Q08DA3
SMR:Q08DA3 MEROPS:C19.021 PRIDE:Q08DA3 GeneID:519992
KEGG:bta:519992 CTD:10600 HOGENOM:HOG000154755 HOVERGEN:HBG062704
InParanoid:Q08DA3 KO:K11844 OrthoDB:EOG495ZRD NextBio:20872996
Uniprot:Q08DA3
Length = 826
Score = 107 (42.7 bits), Expect = 0.00021, P = 0.00021
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 59 QHPSENWLCLCCKEVLCSR-FVNKHMLQHYLETN---HSVALSYSDLSVWCFTCDA---Y 111
++PS WLCL C C R +H L+HY++ H + LS + SVWC+ CD Y
Sbjct: 67 ENPSV-WLCLKCGHQGCGRNSQEQHALKHYMKPRSEPHCLVLSLDNWSVWCYLCDDEVHY 125
Query: 112 LNAQVIPQL 120
N+ + Q+
Sbjct: 126 CNSNRLGQV 134
>UNIPROTKB|J9NW59 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
EMBL:AAEX03004889 Ensembl:ENSCAFT00000045024 Uniprot:J9NW59
Length = 912
Score = 107 (42.7 bits), Expect = 0.00023, P = 0.00023
Identities = 31/106 (29%), Positives = 49/106 (46%)
Query: 34 CDHL--VASLSS-DLAHIPTPDTPCNRCQHPSEN-WLCL--CCKEVLCSRFVNKHMLQHY 87
C HL V ++ DL I C C+ N W CL C V C H H
Sbjct: 8 CPHLDSVGEITKEDL--IQKSHGTCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIHS 65
Query: 88 LETNHSVALSYSDLSVWCFTC--DAYLNAQV-----IPQLRPVYET 126
ET H + ++ + L VWC+ C + +L+ ++ +P +RP+++T
Sbjct: 66 QETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPPLPHVRPLHQT 111
>UNIPROTKB|F1P6Y2 [details] [associations]
symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0008277 "regulation of G-protein coupled receptor protein
signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:AAEX03004889
Ensembl:ENSCAFT00000032445 Uniprot:F1P6Y2
Length = 947
Score = 107 (42.7 bits), Expect = 0.00024, P = 0.00024
Identities = 31/106 (29%), Positives = 49/106 (46%)
Query: 34 CDHL--VASLSS-DLAHIPTPDTPCNRCQHPSEN-WLCL--CCKEVLCSRFVNKHMLQHY 87
C HL V ++ DL I C C+ N W CL C V C H H
Sbjct: 39 CPHLDSVGEITKEDL--IQKSHGTCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIHS 96
Query: 88 LETNHSVALSYSDLSVWCFTC--DAYLNAQV-----IPQLRPVYET 126
ET H + ++ + L VWC+ C + +L+ ++ +P +RP+++T
Sbjct: 97 QETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPPLPHVRPLHQT 142
>UNIPROTKB|Q5ZMP4 [details] [associations]
symbol:USP45 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 InterPro:IPR018200 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS50271 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5560 KO:K11844
GeneTree:ENSGT00690000102047 CTD:85015 HOGENOM:HOG000138193
HOVERGEN:HBG056331 EMBL:AADN02002249 EMBL:AADN02002250
EMBL:AADN02002251 EMBL:AJ719340 IPI:IPI00588998
RefSeq:NP_001026250.1 UniGene:Gga.22454 Ensembl:ENSGALT00000024962
GeneID:421793 KEGG:gga:421793 NextBio:20824512 Uniprot:Q5ZMP4
Length = 223
Score = 102 (41.0 bits), Expect = 0.00029, P = 0.00029
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 61 PSENWLCLCCKEVLCSR-FVNKHMLQHYLETN---HSVALSYSDLSVWCFTCDAYLN 113
PS+ WLCL C CS+ +H L+H+ H + +S S +WC+ CD L+
Sbjct: 83 PSDIWLCLKCGSQGCSKNSEGQHSLKHFQTARTEPHCIVISLSTWIIWCYECDEELS 139
>TAIR|locus:2057469 [details] [associations]
symbol:BRIZ2 "AT2G26000" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0010029 "regulation of seed
germination" evidence=IMP] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA] InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184
SMART:SM00290 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0046982 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0010029 GO:GO:0004842 GO:GO:0000151 GO:GO:0043130
EMBL:AC004747 eggNOG:NOG272422 KO:K10632 OMA:CLQRWED
InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
HOGENOM:HOG000190616 EMBL:BT015082 EMBL:BT015905 EMBL:HQ127734
IPI:IPI00657531 PIR:T02623 RefSeq:NP_001031419.1 UniGene:At.50100
ProteinModelPortal:O80996 SMR:O80996 STRING:O80996 PRIDE:O80996
EnsemblPlants:AT2G26000.2 GeneID:817141 KEGG:ath:AT2G26000
TAIR:At2g26000 PhylomeDB:O80996 ProtClustDB:CLSN2681167
ArrayExpress:O80996 Genevestigator:O80996 Uniprot:O80996
Length = 479
Score = 105 (42.0 bits), Expect = 0.00033, P = 0.00033
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 55 CNRCQHPSENWLCLCCKEVLCSRFVNKHMLQHYLETNHSVALSYSDLSVWCFTCDAYLN 113
C CQ W+C+ C V C R+ H +H+ ET H +L VW + D Y++
Sbjct: 218 CCVCQTTENLWMCVICGVVGCGRYKEGHARRHWEETEHCYSLELETQRVWDYAGDNYVH 276
>CGD|CAL0005412 [details] [associations]
symbol:orf19.1516 species:5476 "Candida albicans" [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA]
InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
SMART:SM00290 CGD:CAL0005412 GO:GO:0046872 GO:GO:0008270
GO:GO:0008234 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
EMBL:AACQ01000007 SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221
KO:K11836 RefSeq:XP_722561.1 ProteinModelPortal:Q5AM59
STRING:Q5AM59 GeneID:3635769 KEGG:cal:CaO19.1516 Uniprot:Q5AM59
Length = 794
Score = 106 (42.4 bits), Expect = 0.00042, P = 0.00042
Identities = 33/108 (30%), Positives = 45/108 (41%)
Query: 27 WVEPLTSCDHLVASLSSDLAHIPTPD---TPCNRCQHPSENWLCLCCKEVLCSRFV---- 79
W + + C H S D+ T + T C++C W+CL C + C R
Sbjct: 157 WEQEIVPCPH-----SIDVEQFETDNLDLTKCSQCDLRENLWICLHCGALGCGRQQYGST 211
Query: 80 ---NKHMLQHYLETNHSVALSYSDLSVWCFTCDAYL---NAQV-IPQL 120
N H L HY H VA+ LS +CDAY N +V +P L
Sbjct: 212 LKGNGHALAHYELAQHPVAIKLGSLSADSESCDAYCYQCNDEVKVPHL 259
>MGI|MGI:1921362 [details] [associations]
symbol:Usp16 "ubiquitin specific peptidase 16" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0042393 "histone binding" evidence=ISO] [GO:0043130 "ubiquitin
binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045901 "positive
regulation of translational elongation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISO] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:1921362
GO:GO:0005634 GO:GO:0045893 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0006974
GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0042393 GO:GO:0043130 GO:GO:0004197
GO:GO:0004843 GO:GO:0004221 GO:GO:0070537 GO:GO:0045901 HSSP:P40818
eggNOG:COG5207 CTD:10600 HOGENOM:HOG000154755 HOVERGEN:HBG062704
KO:K11844 OrthoDB:EOG495ZRD EMBL:AK160038 EMBL:BC003278
EMBL:BC004577 IPI:IPI00116875 RefSeq:NP_077220.2 UniGene:Mm.152941
ProteinModelPortal:Q99LG0 SMR:Q99LG0 STRING:Q99LG0 MEROPS:C19.050
PhosphoSite:Q99LG0 PaxDb:Q99LG0 PRIDE:Q99LG0 GeneID:74112
KEGG:mmu:74112 UCSC:uc007zuk.2 InParanoid:Q99LG0 NextBio:339808
Genevestigator:Q99LG0 Uniprot:Q99LG0
Length = 825
Score = 106 (42.4 bits), Expect = 0.00044, P = 0.00044
Identities = 24/62 (38%), Positives = 30/62 (48%)
Query: 52 DTPCNRCQHPSENWLCLCCKEVLCSR-FVNKHMLQHYLETN---HSVALSYSDLSVWCFT 107
D P + PS WLCL C C R +H L+HY H + LS + SVWC+
Sbjct: 59 DKPEEEAEDPSV-WLCLKCGHQGCGRDSQEQHALKHYTTPRSEPHYLVLSLDNWSVWCYK 117
Query: 108 CD 109
CD
Sbjct: 118 CD 119
>UNIPROTKB|I3LMC2 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0045901 "positive regulation
of translational elongation" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0045893 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004197 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 GeneTree:ENSGT00690000102047 OMA:CKNVAEE
EMBL:FP236679 Ensembl:ENSSSCT00000029188 Uniprot:I3LMC2
Length = 827
Score = 106 (42.4 bits), Expect = 0.00044, P = 0.00044
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 59 QHPSENWLCLCCKEVLCSR-FVNKHMLQHYLETN---HSVALSYSDLSVWCFTCD---AY 111
++PS WLCL C C R +H L+HY+ H + LS + SVWC+ CD Y
Sbjct: 66 ENPSV-WLCLKCGHQGCGRDSQEQHALKHYMTPRSEPHCLVLSLDNWSVWCYLCDDEVQY 124
Query: 112 LNAQVIPQL 120
N+ + Q+
Sbjct: 125 CNSNRLGQV 133
>UNIPROTKB|Q9Y5T5 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase 16"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0007067 "mitosis" evidence=IDA] [GO:0051289 "protein
homotetramerization" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0016578 "histone deubiquitination" evidence=IDA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IMP]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IDA]
[GO:0045901 "positive regulation of translational elongation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0007049
"cell cycle" evidence=TAS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 EMBL:CH471079 GO:GO:0006351
GO:GO:0006974 GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0042393 GO:GO:0043130
GO:GO:0004197 GO:GO:0004843 GO:GO:0004221 EMBL:AL163249
GO:GO:0070537 GO:GO:0045901 EMBL:AF129075 eggNOG:COG5560
MEROPS:C19.021 CTD:10600 HOVERGEN:HBG062704 KO:K11844 OMA:CKNVAEE
EMBL:AF126736 EMBL:AY333928 EMBL:AK023247 EMBL:AK302247
EMBL:AK294284 EMBL:AK222681 EMBL:AK222884 EMBL:BC030777
EMBL:AF113219 IPI:IPI00001780 IPI:IPI00428464 IPI:IPI00792644
IPI:IPI00923398 IPI:IPI00923450 RefSeq:NP_001001992.1
RefSeq:NP_001027582.1 RefSeq:NP_006438.1 UniGene:Hs.99819 PDB:2I50
PDBsum:2I50 ProteinModelPortal:Q9Y5T5 SMR:Q9Y5T5 IntAct:Q9Y5T5
STRING:Q9Y5T5 PhosphoSite:Q9Y5T5 DMDM:6686071 PaxDb:Q9Y5T5
PRIDE:Q9Y5T5 DNASU:10600 Ensembl:ENST00000334352
Ensembl:ENST00000399975 Ensembl:ENST00000399976 GeneID:10600
KEGG:hsa:10600 UCSC:uc002ymw.3 UCSC:uc002ymx.3 UCSC:uc011acm.2
GeneCards:GC21P030396 H-InvDB:HIX0023011 HGNC:HGNC:12614
HPA:HPA021140 MIM:604735 neXtProt:NX_Q9Y5T5 PharmGKB:PA37240
InParanoid:Q9Y5T5 PhylomeDB:Q9Y5T5 ChiTaRS:USP16
EvolutionaryTrace:Q9Y5T5 GenomeRNAi:10600 NextBio:40254
ArrayExpress:Q9Y5T5 Bgee:Q9Y5T5 CleanEx:HS_USP16
Genevestigator:Q9Y5T5 GermOnline:ENSG00000156256 Uniprot:Q9Y5T5
Length = 823
Score = 105 (42.0 bits), Expect = 0.00067, P = 0.00067
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 59 QHPSENWLCLCCKEVLCSR-FVNKHMLQHYLETN---HSVALSYSDLSVWCFTCD 109
+ PS WLCL C C R +H L+HYL H + LS + SVWC+ CD
Sbjct: 67 EKPSV-WLCLKCGHQGCGRNSQEQHALKHYLTPRSEPHCLVLSLDNWSVWCYVCD 120
>UNIPROTKB|H0YNX9 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC118274
EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3 Ensembl:ENST00000559276
Bgee:H0YNX9 Uniprot:H0YNX9
Length = 39
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 58 CQHPSENWLCLCCKEVLCSRFVNKHMLQHY 87
C+ W+CL C V C R+VN H +HY
Sbjct: 10 CRSNKSPWVCLTCSSVHCGRYVNGHAKKHY 39
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 149 149 0.00078 104 3 11 22 0.47 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 88
No. of states in DFA: 610 (65 KB)
Total size of DFA: 175 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.13u 0.08s 16.21t Elapsed: 00:00:01
Total cpu time: 16.14u 0.08s 16.22t Elapsed: 00:00:01
Start: Fri May 10 11:12:42 2013 End: Fri May 10 11:12:43 2013