BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032010
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUA5|VIT1_ARATH Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2
SV=1
Length = 250
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/141 (76%), Positives = 120/141 (85%), Gaps = 3/141 (2%)
Query: 9 PEKQKPLLELEEHEEKHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGI 68
PEKQ L+ H EKHFT+ EIVRDIIIGVSDGLTVPFALAAGLSGA+ SSI+L AGI
Sbjct: 15 PEKQT---LLDHHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGI 71
Query: 69 AEVAAGAVSMGLGGYLAAKSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHE 128
AEVAAGA+SMGLGGYLAAKSE DHY RE+KREQEEI+ P+ EAAE AEILAQYG EPHE
Sbjct: 72 AEVAAGAISMGLGGYLAAKSEEDHYAREMKREQEEIVAVPETEAAEVAEILAQYGIEPHE 131
Query: 129 YEGVVNALKRNPKHWLDFMMK 149
Y VVNAL++NP+ WLDFMM+
Sbjct: 132 YSPVVNALRKNPQAWLDFMMR 152
>sp|Q6ERE5|VIT12_ORYSJ Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica
GN=VIT1.2 PE=3 SV=2
Length = 246
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 120/140 (85%), Gaps = 2/140 (1%)
Query: 10 EKQKPLLELEEHEEKHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIA 69
EKQ+ L L+EH EKHFT+ E+VRDIIIGVSDGLTVPFALAAGLSGA+ PS+++L AG+A
Sbjct: 10 EKQR--LLLDEHTEKHFTAGEVVRDIIIGVSDGLTVPFALAAGLSGANAPSALVLTAGLA 67
Query: 70 EVAAGAVSMGLGGYLAAKSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEY 129
EVAAGA+SMGLGGYLAAKS+ADHY REL+REQEEI PD EAAE A+IL+QYG P EY
Sbjct: 68 EVAAGAISMGLGGYLAAKSDADHYHRELQREQEEIDTVPDTEAAEIADILSQYGLGPEEY 127
Query: 130 EGVVNALKRNPKHWLDFMMK 149
VVN+L+ NPK WL+FMMK
Sbjct: 128 GPVVNSLRSNPKAWLEFMMK 147
>sp|Q6MWE5|VIT11_ORYSJ Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica
GN=VIT1.1 PE=2 SV=1
Length = 252
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/127 (76%), Positives = 112/127 (88%)
Query: 23 EKHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGG 82
E+HFTS E+VRD+I+GVSDGLTVPFALAAGLSGA PSS++L AG+AEVAAGA+SMGLGG
Sbjct: 27 ERHFTSGEVVRDVIMGVSDGLTVPFALAAGLSGASAPSSLVLTAGLAEVAAGAISMGLGG 86
Query: 83 YLAAKSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNALKRNPKH 142
YLAAKSEADHY RE+KREQEEII PD EAAE EI++QYG EPHEY VV+ L+RNP+
Sbjct: 87 YLAAKSEADHYQREMKREQEEIIAVPDTEAAEIGEIMSQYGLEPHEYGPVVDGLRRNPQA 146
Query: 143 WLDFMMK 149
WLDFMM+
Sbjct: 147 WLDFMMR 153
>sp|P47818|CCC1_YEAST Protein CCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=CCC1 PE=1 SV=1
Length = 322
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 81/123 (65%), Gaps = 5/123 (4%)
Query: 30 EIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGYLAAKSE 89
++ D+IIG+SDGLTVPFAL AGLS + +++ G AE+ +GA+SMGLGGYL AKSE
Sbjct: 99 RVISDLIIGLSDGLTVPFALTAGLSSLG-DAKLVITGGFAELISGAISMGLGGYLGAKSE 157
Query: 90 ADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNALK---RNPKHWLDF 146
+D+Y E+K+E+ + + ++ E +IL + + E +V+ +K R P+ +DF
Sbjct: 158 SDYYHAEVKKEKRKFYDNSNLINREIEDILLEINPNFSD-ETIVSFIKDLQRTPELMVDF 216
Query: 147 MMK 149
+++
Sbjct: 217 IIR 219
>sp|Q9M2C3|VITH3_ARATH Vacuolar iron transporter homolog 3 OS=Arabidopsis thaliana
GN=At3g43630 PE=3 SV=1
Length = 200
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 16 LELEEHEEKHFTSS---EIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVA 72
L++E+ +EK F S + +R ++G +DGL +L G+ I+++ G A +
Sbjct: 9 LDMEKDQEKAFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQNVKIMILTGFAGLV 68
Query: 73 AGAVSMGLGGYLAAKSEADHYVRELKRE 100
AGA SM +G +++ S+ D V ++KRE
Sbjct: 69 AGACSMAIGEFVSVYSQYDIEVAQMKRE 96
>sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4 OS=Arabidopsis thaliana
GN=At3g43660 PE=2 SV=1
Length = 198
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 16 LELEEHEEKHFTSS---EIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVA 72
L++E+ +E F S + +R ++G +DGL +L G+ I+L+ G A +
Sbjct: 10 LDMEKDQETTFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDVRIMLLTGFAGLV 69
Query: 73 AGAVSMGLGGYLAAKSEADHYVRELKRE 100
AGA SM +G +++ S+ D V ++KRE
Sbjct: 70 AGACSMAIGEFISVYSQYDIEVAQMKRE 97
>sp|Q9LPU9|VITH1_ARATH Vacuolar iron transporter homolog 1 OS=Arabidopsis thaliana
GN=At1g21140 PE=2 SV=1
Length = 200
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 16 LELEEHEEKHFTSS---EIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVA 72
L++E +EK F S + +R ++G +DGL +L G+ +++++G A +
Sbjct: 12 LDMEMDQEKAFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDVKVMILSGFAGLV 71
Query: 73 AGAVSMGLGGYLAAKSEADHYVRELKREQ 101
AGA SM +G +++ S+ D V ++KRE
Sbjct: 72 AGACSMAIGEFVSVYSQYDIEVAQMKREN 100
>sp|Q9P6J2|PCL1_SCHPO Fe(2+)/Mn(2+) transporter pcl1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pcl1 PE=1 SV=1
Length = 242
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 32 VRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGYLAAKSEAD 91
+R ++G +DG+ L G+ A+ +ILI G+A + +GA+SM +G Y++ S+AD
Sbjct: 21 LRASVLGANDGILSLSGLLVGVVAANADIKVILITGVAGLMSGALSMAVGEYVSVSSQAD 80
Query: 92 HYVRELKREQEEIINAPDIEAAECAEI 118
+L+ E+ E+ D E E A I
Sbjct: 81 LEDADLQLERREMDADWDAEVDELAAI 107
>sp|Q9LSF6|VTH21_ARATH Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana
GN=At3g25190 PE=2 SV=1
Length = 219
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 4 SSYTAPEKQKPLLELEEHEEKHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSII 63
S +P QK E+ E + ++ +R ++G +DGL +L G+ +
Sbjct: 8 SETNSPRNQKTRPRAEKEEVDYMQRAQWLRAALLGANDGLVTVASLMMGVGSIKEDVKAM 67
Query: 64 LIAGIAEVAAGAVSMGLGGYLAAKSEADHYVRELKREQE 102
L+ G A + AGA SM +G +++ ++ D ++KR E
Sbjct: 68 LLVGFAGLVAGACSMAIGEFVSVCTQRDIETAQMKRAIE 106
>sp|P16313|NO21_SOYBN Nodulin-21 OS=Glycine max PE=2 SV=1
Length = 206
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 13 KPLLELEEHEE-KHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEV 71
K L E+H + ++ +R I+G +DGL +L G+ + +L+AG A +
Sbjct: 37 KQTLATEDHTSIDYLQRAQWLRAAILGANDGLVSVASLMMGVGAVKRDAKAMLLAGFAGL 96
Query: 72 AAGAVSMGLGGYLAAKSEADHYVRELKREQE 102
AGA M +G ++A ++ + V ++KR+
Sbjct: 97 VAGACGMAIGEFVAVYTQYEVEVGQMKRDMN 127
>sp|Q9SRD3|VITH2_ARATH Vacuolar iron transporter homolog 2 OS=Arabidopsis thaliana
GN=At1g76800 PE=2 SV=1
Length = 196
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%)
Query: 16 LELEEHEEKHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGA 75
+E E + S+ +R ++G +DGL +L G+ ++++G A + AGA
Sbjct: 12 IEKESTTFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILSGFAGMVAGA 71
Query: 76 VSMGLGGYLAAKSEADHYVRELKREQEEI 104
SM +G +++ S+ D V +++R+ EI
Sbjct: 72 CSMAIGEFVSVYSQYDIEVAQMERDSVEI 100
>sp|Q6H658|VITH1_ORYSJ Vacuolar iron transporter homolog 1 OS=Oryza sativa subsp. japonica
GN=Os02g0644200 PE=2 SV=1
Length = 232
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 44/78 (56%)
Query: 24 KHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGY 83
+ ++ +R ++G +DGL +L G+ A+ +L++G+A + AGA SM +G +
Sbjct: 50 NYVARAQWLRAAVLGANDGLVSVASLMVGVGAANGTRRAMLVSGLAGLVAGACSMAIGEF 109
Query: 84 LAAKSEADHYVRELKREQ 101
++ ++ D +++R +
Sbjct: 110 VSVYAQCDIQAAQIERAR 127
>sp|Q7XTL7|VITH5_ORYSJ Vacuolar iron transporter homolog 5 OS=Oryza sativa subsp. japonica
GN=Os04g0686800 PE=2 SV=3
Length = 208
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%)
Query: 32 VRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGYLAAKSEAD 91
+R ++G +DGL +L G+ + ++I+G A + AGA SM +G +++ S+ D
Sbjct: 38 LRAAVLGANDGLVSTASLMLGVGAVKAEARAMVISGFAGLLAGACSMAIGEFVSVCSQRD 97
Query: 92 HYVRELKREQEE 103
+ +L+R+ +
Sbjct: 98 VELAQLERDGKR 109
>sp|B7F138|VITH2_ORYSJ Vacuolar iron transporter homolog 2 OS=Oryza sativa subsp.
japonica GN=Os04g0538400 PE=2 SV=1
Length = 189
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 43/71 (60%)
Query: 29 SEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGYLAAKS 88
++ +R ++G +DGL +L G+ + + +L++G+A + AGA SM +G +++ +
Sbjct: 4 AQWLRAAVLGANDGLVSVASLMIGIGAVNENNKAMLVSGLAGLVAGACSMAIGEFVSVYA 63
Query: 89 EADHYVRELKR 99
+ D V +++R
Sbjct: 64 QYDIEVTQIER 74
>sp|Q53PN2|VITH4_ORYSJ Vacuolar iron transporter homolog 4 OS=Oryza sativa subsp.
japonica GN=Os11g0161900 PE=3 SV=2
Length = 216
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 28 SSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSI--ILIAGIAEVAAGAVSMGLGGYLA 85
SS+ +R ++G SDGL AL G+ GA P+ +L++G+A + AGA SM +G Y++
Sbjct: 31 SSQWLRAAVLGASDGLVSTAALMLGI-GAARPADARAVLLSGLAGLVAGACSMAIGEYVS 89
Query: 86 AKSEAD 91
+ D
Sbjct: 90 VHVQLD 95
>sp|A8XY95|METH_CAEBR Probable methionine synthase OS=Caenorhabditis briggsae GN=nos-1 PE=3
SV=2
Length = 1273
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 19 EEHEEKHFTSSEIVRDIIIGVSDGLTVPFALAAGL 53
EH++ HF S+ +R + IGV D FA AGL
Sbjct: 1070 REHDQSHFCLSDFIRPLKIGVPDDYLGLFACTAGL 1104
>sp|Q40251|VDE_LACSA Violaxanthin de-epoxidase, chloroplastic OS=Lactuca sativa GN=VDE1
PE=1 SV=1
Length = 473
Score = 33.5 bits (75), Expect = 0.46, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 80 LGGYLAAKSEADHYVRELKREQEEIINAPDIEAAECAEILAQ 121
L G+ + + +++VREL +E++EI+N +EA E ++ +
Sbjct: 424 LEGFKELQQDEENFVRELSKEEKEILNELQMEATEVEKLFGR 465
>sp|Q84ZM7|VITH3_ORYSJ Vacuolar iron transporter homolog 3 OS=Oryza sativa subsp. japonica
GN=Os08g0153300 PE=3 SV=1
Length = 249
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 36/63 (57%)
Query: 29 SEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGYLAAKS 88
++ +R ++G +DGL +L G+ +L++G+A + AGA SM +G +++ +
Sbjct: 68 AQWLRAAVLGANDGLVSVASLMIGVGAVSESGRAMLVSGVAGLVAGACSMAIGEFVSVYA 127
Query: 89 EAD 91
+ D
Sbjct: 128 QYD 130
>sp|Q3IGT7|SYP_PSEHT Proline--tRNA ligase OS=Pseudoalteromonas haloplanktis (strain TAC
125) GN=proS PE=3 SV=2
Length = 574
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 79 GLGGYLAAKSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEP 126
G+ G +A DH + ELK E+ ++++P +E A A+I+A GA+P
Sbjct: 291 GVRGLVALVLRGDHDLNELKAEKHPLVDSP-LEMATEADIVAAIGAKP 337
>sp|D3ZZL9|GCC2_RAT GRIP and coiled-coil domain-containing protein 2 OS=Rattus
norvegicus GN=Gcc2 PE=1 SV=1
Length = 1679
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 87 KSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNALKRN 139
+ A HY +++ QEEI+ E E+++Q E+E VN LK N
Sbjct: 223 EDNAQHYQKDINTFQEEIVQLRATHKEEVNELMSQMETLAKEHEAAVNKLKEN 275
>sp|Q9CDA7|EMBC_MYCLE Probable arabinosyltransferase C OS=Mycobacterium leprae (strain
TN) GN=embC PE=3 SV=1
Length = 1070
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 27 TSSEIVRDIIIG-VSDGL--TVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGL 80
++ E V +IG V+ GL TVP A AAGL+G +L++ + + A AV GL
Sbjct: 47 STFESVEAPLIGYVATGLNVTVPCAAAAGLTGPQSAGQTVLLSTVPKQAPKAVDRGL 103
>sp|Q91ZT9|ASB8_MOUSE Ankyrin repeat and SOCS box protein 8 OS=Mus musculus GN=Asb8 PE=2
SV=1
Length = 288
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 34/120 (28%)
Query: 32 VRDIIIGVSD-----GLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGYLAA 86
V D+I G +D G P A +S AD +L+ AEV A L GY
Sbjct: 37 VEDLIRGGADVNCTHGTLKPLHCACMVSDADCVE--LLLEKGAEVNA------LDGY--- 85
Query: 87 KSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNALKRNPKHWLDF 146
A HY E R++ C E+L +YGA P+ +G + P HW F
Sbjct: 86 NRTALHYAAE--RDEA------------CVEVLLEYGANPNALDGN----RDTPLHWAAF 127
>sp|P10046|DCTD_RHILE C4-dicarboxylate transport transcriptional regulatory protein DctD
OS=Rhizobium leguminosarum GN=dctD PE=3 SV=1
Length = 448
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 31 IVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEV--AAGAVSMGLGGYLAAKS 88
+V DI + DGL L A L G DV +IL+ G ++ A A+ G ++A
Sbjct: 52 VVTDIRMPEIDGLQ----LFATLQGMDVDLPVILMTGHGDIPMAVQAIQDGAYDFIAKPF 107
Query: 89 EADHYVRELKREQEE 103
AD V+ ++R E+
Sbjct: 108 AADRLVQSVRRASEK 122
>sp|Q8CHG3|GCC2_MOUSE GRIP and coiled-coil domain-containing protein 2 OS=Mus musculus
GN=Gcc2 PE=1 SV=2
Length = 1679
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 87 KSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNALKRN 139
+ +A HY +++ Q EI+ E E+++Q E+E +N LK N
Sbjct: 223 EDKAQHYQKDINTFQAEILQLRATHKEEVTELMSQIETSAKEHEAEINKLKEN 275
>sp|Q9W0T5|PYX_DROME Transient receptor potential channel pyrexia OS=Drosophila
melanogaster GN=pyx PE=2 SV=2
Length = 956
Score = 30.4 bits (67), Expect = 4.5, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 107 APDIEAAECAEILAQYGAEPH 127
A D+ A +C EIL +YGA+P+
Sbjct: 206 AIDVNAVDCVEILLKYGADPN 226
>sp|Q89ER4|SSUB_BRAJA Aliphatic sulfonates import ATP-binding protein SsuB
OS=Bradyrhizobium japonicum (strain USDA 110) GN=ssuB
PE=3 SV=1
Length = 278
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 23 EKHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMG 79
K F +E++R I + + G F G SG + + LIAG+ ++ AG +S+G
Sbjct: 46 RKSFGDNEVLRGIDLHIPAG---QFVAIVGKSGCGKSTLLRLIAGLDKIDAGTISLG 99
>sp|Q21XJ9|SSUB_RHOFD Aliphatic sulfonates import ATP-binding protein SsuB
OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118) GN=ssuB PE=3 SV=1
Length = 278
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 1 MAASSYTAPEKQKPLLELEEHEEKHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPS 60
M +S T+ + +PL+ K F + E++R+ + V G F G SG +
Sbjct: 1 MTTNSVTSGRRGEPLVL--RDLSKRFGAREVLRNTQLRVEPG---QFIAIVGRSGCGKST 55
Query: 61 SIILIAGIAEVAAGAVSM 78
+ L+AG+ +AG++++
Sbjct: 56 LLRLVAGLETASAGSITV 73
>sp|Q08E43|ASB8_BOVIN Ankyrin repeat and SOCS box protein 8 OS=Bos taurus GN=ASB8 PE=2
SV=1
Length = 288
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 46/120 (38%), Gaps = 34/120 (28%)
Query: 32 VRDIIIGVSD-----GLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGYLAA 86
V D+I G +D G P A +S AD +L+ AEV A L GY
Sbjct: 37 VEDLIRGGADVNCTHGTLKPLHCACMVSDADCVE--LLLEKGAEVNA------LDGY--- 85
Query: 87 KSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNALKRNPKHWLDF 146
A HY E + C E+L +YGA P+ +G + P HW F
Sbjct: 86 NRTALHYAAE--------------KDEACVEVLLEYGANPNALDGN----RDTPLHWAAF 127
>sp|Q5R6D7|ASB8_PONAB Ankyrin repeat and SOCS box protein 8 OS=Pongo abelii GN=ASB8 PE=2
SV=1
Length = 288
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 46/120 (38%), Gaps = 34/120 (28%)
Query: 32 VRDIIIGVSD-----GLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGYLAA 86
V D+I G +D G P A +S AD +L+ AEV A L GY
Sbjct: 37 VEDLIRGGADVNCTHGTLKPLHCACMVSDADCVE--LLLEKGAEVNA------LDGY--- 85
Query: 87 KSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNALKRNPKHWLDF 146
A HY E + C E+L +YGA P+ +G + P HW F
Sbjct: 86 NRTALHYAAE--------------KDEACVEVLLEYGANPNALDGN----RDTPLHWAAF 127
>sp|Q9H765|ASB8_HUMAN Ankyrin repeat and SOCS box protein 8 OS=Homo sapiens GN=ASB8 PE=2
SV=1
Length = 288
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 46/120 (38%), Gaps = 34/120 (28%)
Query: 32 VRDIIIGVSD-----GLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSMGLGGYLAA 86
V D+I G +D G P A +S AD +L+ AEV A L GY
Sbjct: 37 VEDLIRGGADVNCTHGTLKPLHCACMVSDADCVE--LLLEKGAEVNA------LDGY--- 85
Query: 87 KSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNALKRNPKHWLDF 146
A HY E + C E+L +YGA P+ +G + P HW F
Sbjct: 86 NRTALHYAAE--------------KDEACVEVLLEYGANPNALDGN----RDTPLHWAAF 127
>sp|Q8IWJ2|GCC2_HUMAN GRIP and coiled-coil domain-containing protein 2 OS=Homo sapiens
GN=GCC2 PE=1 SV=4
Length = 1684
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 87 KSEADHYVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNAL 136
++ + HY + + QEE++ I E E++ Q A E+E +N L
Sbjct: 224 EANSQHYQKNINSLQEELLQLKAIHQEEVKELMCQIEASAKEHEAEINKL 273
>sp|Q2GE74|SYC_NEOSM Cysteine--tRNA ligase OS=Neorickettsia sennetsu (strain Miyayama)
GN=cysS PE=3 SV=1
Length = 507
Score = 29.6 bits (65), Expect = 6.9, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 93 YVRELKREQEEIINAPDIEAAECAEILAQYGAEPHEYEGVVNAL 136
YVR + ++II A + +C ++ Y HE+ G++N L
Sbjct: 64 YVRNITDVDDKIITAASVRGVKCDKVALHYEHIFHEHLGLLNCL 107
>sp|Q6D000|RSMB_ERWCT Ribosomal RNA small subunit methyltransferase B OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=rsmB PE=3 SV=1
Length = 429
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 66 AGIAEVAAGAVSMGLGGYLAAKSEADHYVRELKREQEEIINAPDIEAAEC---AEILAQY 122
A +AE GAV++ K + +R+ +R+QEE++ ++ + +LA+
Sbjct: 97 AALAETVEGAVALKRP---QLKGLINGVLRQFQRQQEELLQREATHSSHYLHPSWLLARI 153
Query: 123 -GAEPHEYEGVVNALKRNPKHWL 144
A P+ + G+V A + P WL
Sbjct: 154 EHAYPNNWRGIVEANNQRPPMWL 176
>sp|Q1QE80|POTA_PSYCK Spermidine/putrescine import ATP-binding protein PotA
OS=Psychrobacter cryohalolentis (strain K5) GN=potA
PE=3 SV=1
Length = 402
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 23 EKHFTSSEIVRDIIIGVSDGLTVPFALAAGLSGADVPSSIILIAGIAEVAAGAVSM 78
+K + ++E+++DI + + G F G SG + + LIAG + +AGA+ +
Sbjct: 28 KKTYDNTEVLKDINLDIKHG---EFITLLGPSGCGKTTLLRLIAGFEQPSAGAIYL 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,517,087
Number of Sequences: 539616
Number of extensions: 2149274
Number of successful extensions: 6933
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 6900
Number of HSP's gapped (non-prelim): 60
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)