Query 032013
Match_columns 149
No_of_seqs 241 out of 1563
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 13:24:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032013.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032013hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kbb_A Phosphorylated carbohyd 99.9 3E-23 1E-27 154.9 10.0 90 47-139 83-182 (216)
2 3l8h_A Putative haloacid dehal 99.9 1E-22 3.6E-27 149.0 11.3 119 22-141 1-145 (179)
3 4g9b_A Beta-PGM, beta-phosphog 99.9 2E-22 6.7E-27 154.8 10.2 90 47-141 94-193 (243)
4 2ah5_A COG0546: predicted phos 99.9 1.7E-22 6E-27 151.2 7.3 92 47-140 83-180 (210)
5 4gib_A Beta-phosphoglucomutase 99.9 8.4E-22 2.9E-26 151.7 10.0 92 47-141 115-214 (250)
6 2wm8_A MDP-1, magnesium-depend 99.9 1.5E-21 5E-26 144.7 10.5 119 20-141 25-164 (187)
7 3ib6_A Uncharacterized protein 99.9 3.4E-21 1.2E-25 143.1 11.8 120 22-142 3-143 (189)
8 2oda_A Hypothetical protein ps 99.9 1.6E-21 5.4E-26 146.8 9.7 119 20-140 4-131 (196)
9 2pr7_A Haloacid dehalogenase/e 99.8 2.1E-21 7.1E-26 135.2 7.9 110 22-142 2-119 (137)
10 2gmw_A D,D-heptose 1,7-bisphos 99.8 4.1E-20 1.4E-24 139.7 11.3 118 19-140 22-175 (211)
11 3m9l_A Hydrolase, haloacid deh 99.8 3.3E-20 1.1E-24 137.5 8.2 121 21-142 5-172 (205)
12 3e58_A Putative beta-phosphogl 99.8 5.4E-20 1.8E-24 134.9 9.2 94 48-142 89-190 (214)
13 2g80_A Protein UTR4; YEL038W, 99.8 3E-20 1E-24 145.2 8.2 91 47-142 124-232 (253)
14 2fpr_A Histidine biosynthesis 99.8 4.3E-20 1.5E-24 136.4 8.3 119 19-142 11-161 (176)
15 3kzx_A HAD-superfamily hydrola 99.8 6.7E-20 2.3E-24 137.5 9.4 95 46-141 101-204 (231)
16 3mc1_A Predicted phosphatase, 99.8 4.4E-20 1.5E-24 137.6 8.2 94 47-141 85-186 (226)
17 1zrn_A L-2-haloacid dehalogena 99.8 9E-20 3.1E-24 136.9 9.5 94 47-141 94-195 (232)
18 3dv9_A Beta-phosphoglucomutase 99.8 1.4E-19 4.7E-24 136.3 10.5 93 47-141 107-209 (247)
19 2hi0_A Putative phosphoglycola 99.8 8.7E-20 3E-24 138.9 9.2 92 47-140 109-208 (240)
20 2p9j_A Hypothetical protein AQ 99.8 5.9E-20 2E-24 132.6 7.6 115 22-140 9-126 (162)
21 3um9_A Haloacid dehalogenase, 99.8 2.7E-19 9.1E-24 133.5 11.3 96 46-142 94-197 (230)
22 3qxg_A Inorganic pyrophosphata 99.8 1.5E-19 5.1E-24 137.0 9.6 93 47-141 108-210 (243)
23 4ex6_A ALNB; modified rossman 99.8 9.3E-20 3.2E-24 137.0 8.4 96 45-141 101-204 (237)
24 2no4_A (S)-2-haloacid dehaloge 99.8 1.8E-19 6.3E-24 136.2 10.1 93 48-141 105-205 (240)
25 2nyv_A Pgpase, PGP, phosphogly 99.8 2E-19 6.7E-24 135.6 9.8 95 45-140 80-182 (222)
26 2pib_A Phosphorylated carbohyd 99.8 2.1E-19 7.3E-24 131.8 9.5 91 47-138 83-181 (216)
27 3s6j_A Hydrolase, haloacid deh 99.8 2.9E-19 9.9E-24 133.3 9.7 94 47-141 90-191 (233)
28 3e8m_A Acylneuraminate cytidyl 99.8 2.1E-19 7E-24 130.0 8.2 117 20-140 2-121 (164)
29 3umb_A Dehalogenase-like hydro 99.8 3.5E-19 1.2E-23 133.3 9.3 95 47-142 98-200 (233)
30 1k1e_A Deoxy-D-mannose-octulos 99.8 3.8E-19 1.3E-23 131.3 8.5 116 21-140 7-125 (180)
31 3cnh_A Hydrolase family protei 99.8 4.6E-19 1.6E-23 130.4 8.7 94 47-142 85-186 (200)
32 1qq5_A Protein (L-2-haloacid d 99.8 1.1E-18 3.8E-23 133.5 10.5 93 47-142 92-192 (253)
33 2hsz_A Novel predicted phospha 99.8 9.2E-19 3.1E-23 133.8 10.0 94 47-141 113-214 (243)
34 3nas_A Beta-PGM, beta-phosphog 99.8 7.8E-19 2.7E-23 131.6 8.9 90 49-141 93-190 (233)
35 3m1y_A Phosphoserine phosphata 99.8 2.5E-19 8.6E-24 133.0 5.7 90 47-139 74-183 (217)
36 2o2x_A Hypothetical protein; s 99.8 9.8E-19 3.4E-23 132.3 9.0 119 20-140 29-181 (218)
37 2p11_A Hypothetical protein; p 99.8 2.2E-19 7.4E-24 136.1 5.2 93 47-141 95-191 (231)
38 2w43_A Hypothetical 2-haloalka 99.8 7.2E-19 2.5E-23 129.9 7.9 92 48-142 74-171 (201)
39 3ddh_A Putative haloacid dehal 99.8 8.1E-19 2.8E-23 130.2 8.0 93 47-140 104-201 (234)
40 3mn1_A Probable YRBI family ph 99.8 1.3E-18 4.4E-23 129.8 9.0 115 21-139 18-135 (189)
41 3sd7_A Putative phosphatase; s 99.8 9.8E-19 3.3E-23 132.0 8.4 94 47-141 109-211 (240)
42 2hoq_A Putative HAD-hydrolase 99.8 5.7E-19 2E-23 133.8 7.1 92 48-140 94-194 (241)
43 4eek_A Beta-phosphoglucomutase 99.8 5.8E-19 2E-23 134.9 6.9 95 46-141 108-212 (259)
44 3nuq_A Protein SSM1, putative 99.8 3.6E-18 1.2E-22 132.5 11.3 91 47-138 141-246 (282)
45 2hcf_A Hydrolase, haloacid deh 99.8 9.4E-19 3.2E-23 130.8 7.6 93 47-140 92-196 (234)
46 3l5k_A Protein GS1, haloacid d 99.8 2.1E-19 7.1E-24 136.7 3.7 95 46-141 110-217 (250)
47 2gfh_A Haloacid dehalogenase-l 99.8 1.3E-18 4.4E-23 135.0 7.8 93 47-141 120-222 (260)
48 3ed5_A YFNB; APC60080, bacillu 99.8 2.5E-18 8.6E-23 128.5 8.9 94 47-142 102-205 (238)
49 3k1z_A Haloacid dehalogenase-l 99.8 2.8E-18 9.5E-23 132.5 9.3 94 47-142 105-207 (263)
50 3mmz_A Putative HAD family hyd 99.8 3.4E-18 1.1E-22 126.2 9.2 114 20-139 10-127 (176)
51 2om6_A Probable phosphoserine 99.8 3.3E-18 1.1E-22 127.4 9.1 93 49-142 100-204 (235)
52 3ij5_A 3-deoxy-D-manno-octulos 99.8 2.2E-18 7.4E-23 131.5 8.3 115 20-140 47-166 (211)
53 4dcc_A Putative haloacid dehal 99.8 1.3E-18 4.4E-23 131.1 6.9 93 48-142 112-218 (229)
54 2hdo_A Phosphoglycolate phosph 99.7 1.1E-18 3.8E-23 129.2 6.4 94 46-141 81-182 (209)
55 2fi1_A Hydrolase, haloacid deh 99.7 5.4E-18 1.8E-22 123.3 9.9 93 48-142 82-180 (190)
56 2b82_A APHA, class B acid phos 99.7 1.9E-19 6.6E-24 136.9 2.2 117 21-142 36-186 (211)
57 2i6x_A Hydrolase, haloacid deh 99.7 1E-18 3.5E-23 129.3 6.1 92 48-141 89-194 (211)
58 2wf7_A Beta-PGM, beta-phosphog 99.7 4.9E-18 1.7E-22 125.6 9.5 92 47-141 90-189 (221)
59 3i28_A Epoxide hydrolase 2; ar 99.7 1E-18 3.6E-23 143.9 6.2 95 47-142 99-205 (555)
60 3iru_A Phoshonoacetaldehyde hy 99.7 9.6E-18 3.3E-22 128.2 10.7 94 47-141 110-213 (277)
61 3nvb_A Uncharacterized protein 99.7 2.6E-18 8.8E-23 142.0 8.0 122 18-140 218-356 (387)
62 3n07_A 3-deoxy-D-manno-octulos 99.7 6.5E-18 2.2E-22 127.3 9.5 116 21-140 24-142 (195)
63 3smv_A S-(-)-azetidine-2-carbo 99.7 2.8E-18 9.7E-23 127.9 7.3 92 47-142 98-201 (240)
64 3n1u_A Hydrolase, HAD superfam 99.7 3.7E-18 1.3E-22 127.7 7.7 115 20-140 17-136 (191)
65 3qnm_A Haloacid dehalogenase-l 99.7 5.2E-18 1.8E-22 126.7 8.4 94 47-142 106-208 (240)
66 3u26_A PF00702 domain protein; 99.7 7.4E-18 2.5E-22 125.9 8.4 93 47-141 99-200 (234)
67 2b0c_A Putative phosphatase; a 99.7 1.3E-18 4.4E-23 128.1 3.4 95 47-142 90-193 (206)
68 1nnl_A L-3-phosphoserine phosp 99.7 1E-18 3.6E-23 131.1 2.9 92 47-140 85-196 (225)
69 3fvv_A Uncharacterized protein 99.7 1.7E-17 5.7E-22 124.9 8.7 92 48-140 92-204 (232)
70 1te2_A Putative phosphatase; s 99.7 1.7E-17 5.8E-22 122.6 8.6 93 47-140 93-193 (226)
71 2r8e_A 3-deoxy-D-manno-octulos 99.7 1.9E-17 6.6E-22 123.0 8.4 116 21-140 25-143 (188)
72 3d6j_A Putative haloacid dehal 99.7 3.5E-17 1.2E-21 120.8 8.9 93 47-140 88-188 (225)
73 2go7_A Hydrolase, haloacid deh 99.7 4.4E-17 1.5E-21 118.4 9.2 93 47-141 84-184 (207)
74 3umg_A Haloacid dehalogenase; 99.7 4.3E-17 1.5E-21 122.7 9.4 92 47-142 115-214 (254)
75 4eze_A Haloacid dehalogenase-l 99.7 9.7E-18 3.3E-22 134.9 6.2 118 19-139 105-287 (317)
76 2qlt_A (DL)-glycerol-3-phospha 99.7 2E-17 7E-22 128.5 7.7 93 46-140 112-220 (275)
77 1l7m_A Phosphoserine phosphata 99.7 1.3E-17 4.4E-22 122.5 5.9 91 47-138 75-183 (211)
78 2pke_A Haloacid delahogenase-l 99.7 2.9E-17 9.8E-22 125.1 7.9 92 47-140 111-206 (251)
79 3umc_A Haloacid dehalogenase; 99.7 5.2E-17 1.8E-21 122.8 8.7 92 47-142 119-218 (254)
80 3vay_A HAD-superfamily hydrola 99.7 3.3E-17 1.1E-21 122.3 7.1 89 47-142 104-201 (230)
81 3kd3_A Phosphoserine phosphohy 99.7 5.4E-17 1.9E-21 119.3 7.8 92 47-140 81-189 (219)
82 2zg6_A Putative uncharacterize 99.7 3.1E-18 1E-22 128.7 0.8 93 47-142 94-193 (220)
83 1swv_A Phosphonoacetaldehyde h 99.7 1.3E-16 4.4E-21 122.1 9.8 93 47-140 102-204 (267)
84 3ewi_A N-acylneuraminate cytid 99.7 9.7E-17 3.3E-21 118.5 8.7 113 20-140 7-125 (168)
85 3zvl_A Bifunctional polynucleo 99.7 2.2E-16 7.5E-21 131.1 10.0 119 20-141 56-218 (416)
86 2fea_A 2-hydroxy-3-keto-5-meth 99.7 6.6E-17 2.2E-21 123.1 6.1 90 47-140 76-189 (236)
87 2i33_A Acid phosphatase; HAD s 99.7 7.3E-17 2.5E-21 126.6 6.2 120 19-140 56-214 (258)
88 1rku_A Homoserine kinase; phos 99.7 1.4E-16 4.9E-21 117.9 6.5 92 46-139 67-170 (206)
89 3p96_A Phosphoserine phosphata 99.7 6.4E-17 2.2E-21 133.5 5.1 118 19-139 182-364 (415)
90 1q92_A 5(3)-deoxyribonucleotid 99.6 7.3E-19 2.5E-23 131.1 -6.4 86 46-142 73-165 (197)
91 2fdr_A Conserved hypothetical 99.6 1.4E-16 4.9E-21 118.5 6.1 92 47-142 86-188 (229)
92 2i7d_A 5'(3')-deoxyribonucleot 99.6 4.7E-18 1.6E-22 126.1 -4.2 87 46-142 71-163 (193)
93 1ltq_A Polynucleotide kinase; 99.6 3.6E-15 1.2E-19 117.4 11.3 115 21-140 158-296 (301)
94 2ho4_A Haloacid dehalogenase-l 99.6 3.9E-15 1.3E-19 113.3 11.1 45 20-74 5-49 (259)
95 4ap9_A Phosphoserine phosphata 99.6 1E-16 3.5E-21 116.9 2.0 91 47-139 78-175 (201)
96 1qyi_A ZR25, hypothetical prot 99.6 1.5E-15 5.2E-20 125.4 8.7 94 47-141 214-342 (384)
97 2hhl_A CTD small phosphatase-l 99.6 2.1E-16 7.1E-21 119.5 1.7 117 20-140 26-163 (195)
98 1yns_A E-1 enzyme; hydrolase f 99.6 5E-15 1.7E-19 115.2 9.4 93 47-142 129-232 (261)
99 3skx_A Copper-exporting P-type 99.6 1.4E-15 4.7E-20 116.9 4.6 80 48-138 144-229 (280)
100 1vjr_A 4-nitrophenylphosphatas 99.6 2.3E-14 7.8E-19 110.4 11.1 58 20-88 15-75 (271)
101 1yv9_A Hydrolase, haloacid deh 99.6 2.6E-14 8.8E-19 109.9 10.5 47 21-77 4-50 (264)
102 2x4d_A HLHPP, phospholysine ph 99.5 2.8E-14 9.6E-19 108.5 10.6 60 21-87 11-73 (271)
103 3n28_A Phosphoserine phosphata 99.5 3E-15 1E-19 120.0 5.0 93 46-139 176-286 (335)
104 3bwv_A Putative 5'(3')-deoxyri 99.5 9.1E-15 3.1E-19 107.0 7.0 105 22-141 4-152 (180)
105 2c4n_A Protein NAGD; nucleotid 99.5 1.1E-15 3.6E-20 114.5 0.6 44 97-140 174-220 (250)
106 3qgm_A P-nitrophenyl phosphata 99.5 1.3E-13 4.5E-18 106.1 11.2 56 21-87 7-65 (268)
107 3epr_A Hydrolase, haloacid deh 99.5 1.1E-13 3.9E-18 106.8 9.8 57 21-88 4-63 (264)
108 3pdw_A Uncharacterized hydrola 99.5 1E-13 3.4E-18 106.8 9.5 57 21-88 5-64 (266)
109 2ght_A Carboxy-terminal domain 99.5 4.7E-15 1.6E-19 110.5 1.5 114 21-138 14-148 (181)
110 1wr8_A Phosphoglycolate phosph 99.5 5.9E-13 2E-17 101.2 11.1 58 22-89 3-60 (231)
111 1zjj_A Hypothetical protein PH 99.4 9.3E-14 3.2E-18 107.4 6.6 46 22-77 1-46 (263)
112 3a1c_A Probable copper-exporti 99.4 1.8E-13 6.1E-18 107.5 8.0 106 22-138 143-248 (287)
113 2oyc_A PLP phosphatase, pyrido 99.4 5.8E-13 2E-17 105.1 10.4 42 22-73 21-62 (306)
114 1l6r_A Hypothetical protein TA 99.4 5.1E-13 1.7E-17 102.0 8.0 61 21-91 4-64 (227)
115 3fzq_A Putative hydrolase; YP_ 99.4 9.4E-13 3.2E-17 101.1 8.3 57 21-87 4-60 (274)
116 3dnp_A Stress response protein 99.3 4.1E-12 1.4E-16 98.7 9.8 58 22-89 6-63 (290)
117 4dw8_A Haloacid dehalogenase-l 99.3 5.2E-12 1.8E-16 97.6 10.1 57 22-88 5-61 (279)
118 3mpo_A Predicted hydrolase of 99.3 3.2E-12 1.1E-16 98.8 8.1 58 22-89 5-62 (279)
119 3gyg_A NTD biosynthesis operon 99.3 1.2E-12 4.2E-17 102.0 2.1 90 49-139 123-252 (289)
120 3pct_A Class C acid phosphatas 99.2 4.3E-11 1.5E-15 94.1 6.6 113 23-137 59-204 (260)
121 3r4c_A Hydrolase, haloacid deh 99.2 5.5E-11 1.9E-15 91.3 6.9 49 20-76 10-58 (268)
122 3pgv_A Haloacid dehalogenase-l 99.1 7.9E-11 2.7E-15 91.8 7.1 62 20-91 19-80 (285)
123 3ocu_A Lipoprotein E; hydrolas 99.1 3E-11 1E-15 95.1 4.3 109 20-129 56-188 (262)
124 2obb_A Hypothetical protein; s 99.1 1.6E-10 5.5E-15 83.2 7.6 95 22-126 3-101 (142)
125 1xvi_A MPGP, YEDP, putative ma 99.1 2E-10 6.7E-15 89.6 7.7 65 22-96 9-74 (275)
126 1rkq_A Hypothetical protein YI 99.1 1.8E-10 6.3E-15 89.9 7.3 60 21-90 4-63 (282)
127 2b30_A Pvivax hypothetical pro 99.1 1.2E-10 4.3E-15 92.1 5.9 59 21-89 26-88 (301)
128 1nf2_A Phosphatase; structural 99.1 2.7E-10 9.4E-15 88.2 7.4 58 22-90 2-59 (268)
129 1nrw_A Hypothetical protein, h 99.1 2.7E-10 9.3E-15 89.0 7.2 61 21-91 3-63 (288)
130 3dao_A Putative phosphatse; st 99.0 2.2E-10 7.4E-15 89.3 5.5 62 20-90 19-80 (283)
131 2pq0_A Hypothetical conserved 99.0 7E-10 2.4E-14 84.9 7.1 59 22-90 3-61 (258)
132 2zos_A MPGP, mannosyl-3-phosph 99.0 5.2E-10 1.8E-14 86.0 6.4 63 22-96 2-64 (249)
133 1rlm_A Phosphatase; HAD family 99.0 2.1E-10 7.3E-15 88.8 4.0 62 22-93 3-65 (271)
134 3qle_A TIM50P; chaperone, mito 99.0 5.3E-11 1.8E-15 90.5 0.3 113 20-138 32-153 (204)
135 2yj3_A Copper-transporting ATP 98.5 5.9E-11 2E-15 92.3 0.0 89 47-139 135-223 (263)
136 1xpj_A Hypothetical protein; s 99.0 2.5E-09 8.6E-14 74.8 8.1 52 22-76 1-52 (126)
137 3l7y_A Putative uncharacterize 98.9 5.9E-10 2E-14 87.7 4.0 59 21-89 36-95 (304)
138 3f9r_A Phosphomannomutase; try 98.9 2.8E-09 9.6E-14 82.3 6.4 52 22-83 4-55 (246)
139 2hx1_A Predicted sugar phospha 98.9 1.7E-10 5.8E-15 89.6 -0.8 88 52-141 149-253 (284)
140 2hx1_A Predicted sugar phospha 98.9 4.5E-09 1.5E-13 81.5 7.1 61 21-92 13-77 (284)
141 1u02_A Trehalose-6-phosphate p 98.8 2.8E-09 9.5E-14 81.6 4.5 59 22-86 1-59 (239)
142 3kc2_A Uncharacterized protein 98.8 1.3E-08 4.4E-13 82.9 8.4 102 20-139 11-117 (352)
143 3zx4_A MPGP, mannosyl-3-phosph 98.8 8.5E-09 2.9E-13 79.1 6.1 56 24-94 2-57 (259)
144 2rbk_A Putative uncharacterize 98.8 2.5E-09 8.7E-14 82.1 2.5 55 23-87 3-57 (261)
145 2fue_A PMM 1, PMMH-22, phospho 98.7 6.3E-09 2.2E-13 80.4 4.1 53 21-84 12-64 (262)
146 2amy_A PMM 2, phosphomannomuta 98.7 1.7E-08 5.7E-13 77.0 6.0 47 21-77 5-51 (246)
147 3ef0_A RNA polymerase II subun 98.6 2.4E-08 8.2E-13 82.0 5.1 100 22-125 18-155 (372)
148 1s2o_A SPP, sucrose-phosphatas 98.5 3.1E-08 1.1E-12 75.8 3.2 55 23-89 4-58 (244)
149 3shq_A UBLCP1; phosphatase, hy 98.3 9.7E-08 3.3E-12 77.0 1.0 115 21-139 139-272 (320)
150 4fe3_A Cytosolic 5'-nucleotida 98.1 3.8E-06 1.3E-10 65.7 5.7 44 46-90 139-182 (297)
151 4as2_A Phosphorylcholine phosp 97.8 1.4E-05 4.6E-10 64.5 4.4 38 48-86 143-180 (327)
152 3j08_A COPA, copper-exporting 97.7 9.9E-05 3.4E-09 64.3 8.1 102 22-134 437-538 (645)
153 2rbk_A Putative uncharacterize 97.5 0.00019 6.5E-09 54.5 6.1 90 49-139 86-228 (261)
154 1y8a_A Hypothetical protein AF 97.4 7.4E-06 2.5E-10 65.1 -2.7 40 21-75 20-59 (332)
155 3j09_A COPA, copper-exporting 97.4 0.00067 2.3E-08 59.7 8.8 103 21-134 514-616 (723)
156 2jc9_A Cytosolic purine 5'-nuc 97.3 0.00026 8.9E-09 60.7 5.8 95 47-143 245-393 (555)
157 3rfu_A Copper efflux ATPase; a 97.3 0.00039 1.3E-08 61.5 6.8 103 22-134 534-636 (736)
158 1y8a_A Hypothetical protein AF 97.1 0.00034 1.2E-08 55.4 4.1 90 48-139 103-250 (332)
159 3ar4_A Sarcoplasmic/endoplasmi 96.8 0.0072 2.5E-07 54.9 10.2 87 48-135 603-717 (995)
160 3ef1_A RNA polymerase II subun 96.7 0.0023 7.8E-08 53.5 6.0 102 21-125 25-163 (442)
161 1rlm_A Phosphatase; HAD family 96.7 0.00089 3E-08 51.2 3.3 77 60-139 142-232 (271)
162 2pq0_A Hypothetical conserved 96.6 0.0066 2.3E-07 45.6 7.2 30 110-139 195-224 (258)
163 4gxt_A A conserved functionall 96.3 0.0026 8.9E-08 52.1 3.4 43 46-89 219-261 (385)
164 1yns_A E-1 enzyme; hydrolase f 96.0 0.0012 4E-08 50.6 0.2 16 21-36 9-24 (261)
165 3kc2_A Uncharacterized protein 95.6 0.0081 2.8E-07 48.6 3.5 30 113-142 289-319 (352)
166 3a1c_A Probable copper-exporti 95.0 0.0091 3.1E-07 46.0 2.1 17 22-38 32-48 (287)
167 3dao_A Putative phosphatse; st 94.7 0.1 3.4E-06 39.8 7.2 40 100-139 211-252 (283)
168 3ixz_A Potassium-transporting 94.4 0.16 5.6E-06 46.3 8.9 41 48-89 604-644 (1034)
169 3l7y_A Putative uncharacterize 94.1 0.09 3.1E-06 40.5 5.8 39 101-139 229-269 (304)
170 2zxe_A Na, K-ATPase alpha subu 93.5 0.3 1E-05 44.6 8.9 41 48-89 599-639 (1028)
171 1mhs_A Proton pump, plasma mem 93.1 0.33 1.1E-05 43.9 8.4 42 48-90 535-576 (920)
172 1qyi_A ZR25, hypothetical prot 92.9 0.037 1.3E-06 45.2 1.7 19 22-40 1-19 (384)
173 1nf2_A Phosphatase; structural 92.5 0.068 2.3E-06 40.5 2.7 41 99-139 189-231 (268)
174 4g63_A Cytosolic IMP-GMP speci 92.2 0.17 5.8E-06 42.5 4.9 56 50-108 188-252 (470)
175 1nrw_A Hypothetical protein, h 91.6 0.12 4.1E-06 39.5 3.2 30 110-139 228-257 (288)
176 3pgv_A Haloacid dehalogenase-l 90.5 0.16 5.5E-06 38.6 2.9 41 99-139 208-250 (285)
177 4fak_A Ribosomal RNA large sub 88.9 1.3 4.3E-05 32.0 6.4 88 7-111 60-148 (163)
178 3b8c_A ATPase 2, plasma membra 87.6 0.39 1.3E-05 43.3 3.6 41 48-89 488-528 (885)
179 2yj3_A Copper-transporting ATP 87.3 0.11 3.8E-06 39.5 0.0 20 19-38 25-44 (263)
180 2kln_A Probable sulphate-trans 86.0 5.1 0.00017 26.7 8.0 69 21-102 47-115 (130)
181 1rkq_A Hypothetical protein YI 85.9 0.57 1.9E-05 35.6 3.3 40 100-139 198-239 (282)
182 3dzc_A UDP-N-acetylglucosamine 85.1 4.4 0.00015 32.4 8.4 86 54-140 42-141 (396)
183 2b30_A Pvivax hypothetical pro 84.6 0.62 2.1E-05 36.0 3.0 40 100-139 224-265 (301)
184 3luf_A Two-component system re 83.7 6.6 0.00023 29.3 8.5 68 55-128 65-138 (259)
185 2c4n_A Protein NAGD; nucleotid 82.1 9.9 0.00034 26.8 8.6 102 22-138 3-107 (250)
186 1ns5_A Hypothetical protein YB 81.8 2.8 9.4E-05 29.9 5.3 86 8-111 54-139 (155)
187 1to0_A Hypothetical UPF0247 pr 81.0 4.8 0.00016 29.0 6.4 87 8-111 57-144 (167)
188 2jc9_A Cytosolic purine 5'-nuc 78.0 1.3 4.4E-05 37.9 2.9 39 19-66 62-102 (555)
189 3jte_A Response regulator rece 77.1 12 0.00042 24.2 7.5 55 20-92 48-104 (143)
190 3n28_A Phosphoserine phosphata 75.9 3.1 0.00011 32.2 4.4 42 48-90 43-95 (335)
191 4gxt_A A conserved functionall 75.7 1.1 3.7E-05 36.4 1.7 15 22-36 40-54 (385)
192 2yx0_A Radical SAM enzyme; pre 75.4 4.8 0.00016 31.4 5.4 38 49-87 155-192 (342)
193 1s2o_A SPP, sucrose-phosphatas 74.6 1.6 5.3E-05 32.4 2.3 41 99-139 161-203 (244)
194 1o6d_A Hypothetical UPF0247 pr 73.1 3.6 0.00012 29.6 3.7 87 8-111 52-138 (163)
195 1zjj_A Hypothetical protein PH 73.0 2.4 8.4E-05 31.4 3.0 92 47-141 129-230 (263)
196 3zx4_A MPGP, mannosyl-3-phosph 73.0 2.4 8.2E-05 31.4 3.0 41 99-139 175-219 (259)
197 3c8f_A Pyruvate formate-lyase 72.2 12 0.0004 27.0 6.6 77 50-138 83-164 (245)
198 2ho4_A Haloacid dehalogenase-l 72.2 0.18 6.2E-06 37.1 -3.5 92 48-142 122-225 (259)
199 3kht_A Response regulator; PSI 71.8 13 0.00044 24.2 6.2 54 21-92 51-108 (144)
200 3ot5_A UDP-N-acetylglucosamine 71.3 12 0.00041 29.9 7.0 85 54-139 44-143 (403)
201 3t6k_A Response regulator rece 70.7 19 0.00063 23.3 6.9 54 21-92 48-105 (136)
202 2qxy_A Response regulator; reg 70.7 15 0.00052 23.7 6.4 53 21-92 48-102 (142)
203 3hzh_A Chemotaxis response reg 70.5 14 0.00049 24.5 6.4 54 21-92 83-138 (157)
204 1yv9_A Hydrolase, haloacid deh 69.9 3.2 0.00011 30.5 3.0 93 47-141 125-228 (264)
205 3l86_A Acetylglutamate kinase; 69.5 13 0.00045 28.7 6.6 58 22-93 36-93 (279)
206 3llo_A Prestin; STAS domain, c 69.2 17 0.00059 24.3 6.5 60 21-93 63-122 (143)
207 3gt7_A Sensor protein; structu 68.1 22 0.00076 23.5 6.9 54 21-92 51-108 (154)
208 1k68_A Phytochrome response re 67.6 19 0.00066 22.8 6.3 55 20-92 54-112 (140)
209 2ka5_A Putative anti-sigma fac 67.3 13 0.00045 24.5 5.5 60 21-93 51-110 (125)
210 3hdg_A Uncharacterized protein 64.9 23 0.00078 22.6 6.3 54 21-92 51-106 (137)
211 4dgh_A Sulfate permease family 64.9 12 0.0004 24.8 4.8 68 20-100 47-114 (130)
212 3gyg_A NTD biosynthesis operon 64.5 8.7 0.0003 28.7 4.6 58 20-89 20-85 (289)
213 1sbo_A Putative anti-sigma fac 63.6 11 0.00039 23.6 4.4 57 23-93 45-102 (110)
214 3drn_A Peroxiredoxin, bacterio 63.5 5.8 0.0002 27.0 3.2 39 50-89 49-87 (161)
215 2zay_A Response regulator rece 62.6 28 0.00095 22.5 6.5 54 21-92 52-109 (147)
216 3f6p_A Transcriptional regulat 62.6 24 0.00081 22.1 6.0 54 21-92 46-100 (120)
217 2f9f_A First mannosyl transfer 61.0 15 0.0005 25.3 4.9 86 51-141 36-128 (177)
218 4dgf_A Sulfate transporter sul 60.7 13 0.00046 24.8 4.6 70 20-102 50-119 (135)
219 3iix_A Biotin synthetase, puta 60.7 22 0.00075 27.4 6.4 78 51-137 117-194 (348)
220 1tv8_A MOAA, molybdenum cofact 60.6 37 0.0013 26.1 7.7 82 49-137 79-162 (340)
221 3hv2_A Response regulator/HD d 59.0 34 0.0012 22.3 6.5 54 21-92 58-114 (153)
222 4dad_A Putative pilus assembly 58.3 19 0.00066 23.3 5.0 54 20-91 66-121 (146)
223 2oyc_A PLP phosphatase, pyrido 56.5 6.2 0.00021 29.9 2.5 93 47-141 155-260 (306)
224 3gl9_A Response regulator; bet 56.2 17 0.00059 23.0 4.4 38 54-92 62-103 (122)
225 3to5_A CHEY homolog; alpha(5)b 56.0 19 0.00066 24.3 4.7 38 54-92 73-114 (134)
226 3ilh_A Two component response 55.3 38 0.0013 21.6 7.1 55 20-92 59-120 (146)
227 3mm4_A Histidine kinase homolo 54.8 52 0.0018 23.1 7.2 54 21-92 119-179 (206)
228 3can_A Pyruvate-formate lyase- 54.7 13 0.00045 25.9 3.9 29 47-75 14-43 (182)
229 3cz5_A Two-component response 54.5 40 0.0014 21.9 6.2 38 54-92 67-106 (153)
230 4e7p_A Response regulator; DNA 54.3 42 0.0014 21.8 6.5 54 21-92 66-121 (150)
231 3m6m_D Sensory/regulatory prot 54.1 42 0.0014 21.7 7.0 65 21-108 58-128 (143)
232 1x92_A APC5045, phosphoheptose 54.0 18 0.0006 25.6 4.5 29 49-77 125-153 (199)
233 2z2u_A UPF0026 protein MJ0257; 53.9 30 0.001 26.3 6.0 36 49-88 141-176 (311)
234 1ybd_A Uridylate kinase; alpha 53.7 29 0.001 25.4 5.8 30 55-85 201-230 (239)
235 2a1f_A Uridylate kinase; PYRH, 52.6 19 0.00066 26.7 4.7 38 55-93 202-239 (247)
236 2iw1_A Lipopolysaccharide core 51.6 11 0.00039 28.6 3.3 85 51-141 209-301 (374)
237 3sho_A Transcriptional regulat 51.6 19 0.00063 25.1 4.2 28 50-77 100-127 (187)
238 3c48_A Predicted glycosyltrans 51.5 20 0.00069 27.9 4.8 85 52-141 260-356 (438)
239 2xbl_A Phosphoheptose isomeras 51.4 18 0.00061 25.4 4.1 28 50-77 129-156 (198)
240 1qkk_A DCTD, C4-dicarboxylate 51.1 39 0.0013 22.1 5.7 54 21-92 47-102 (155)
241 1z9d_A Uridylate kinase, UK, U 50.6 41 0.0014 25.0 6.2 32 55-87 202-233 (252)
242 2xhz_A KDSD, YRBH, arabinose 5 50.4 17 0.0006 25.2 3.9 29 49-77 108-136 (183)
243 1xvi_A MPGP, YEDP, putative ma 50.4 8.5 0.00029 28.8 2.3 41 99-139 188-233 (275)
244 3t6o_A Sulfate transporter/ant 50.1 19 0.00064 23.4 3.8 60 21-93 47-107 (121)
245 1m3s_A Hypothetical protein YC 49.4 22 0.00076 24.7 4.4 28 50-77 92-119 (186)
246 4do4_A Alpha-N-acetylgalactosa 48.8 27 0.00093 27.6 5.2 59 5-72 36-104 (400)
247 2yva_A DNAA initiator-associat 48.6 16 0.00055 25.7 3.5 29 49-77 121-149 (196)
248 3hcz_A Possible thiol-disulfid 48.3 27 0.00091 22.5 4.4 42 48-90 48-90 (148)
249 3heb_A Response regulator rece 47.9 37 0.0013 22.1 5.1 55 20-92 58-116 (152)
250 3h1g_A Chemotaxis protein CHEY 47.9 27 0.00094 22.1 4.3 39 53-92 66-108 (129)
251 2jjm_A Glycosyl transferase, g 47.8 47 0.0016 25.4 6.4 84 52-141 228-315 (394)
252 2c0d_A Thioredoxin peroxidase 47.1 23 0.00078 25.9 4.2 36 50-86 76-111 (221)
253 1tk9_A Phosphoheptose isomeras 46.8 15 0.00051 25.6 3.1 28 50-77 123-150 (188)
254 1p2f_A Response regulator; DRR 46.5 61 0.0021 22.6 6.4 38 54-92 59-98 (220)
255 3lua_A Response regulator rece 46.4 37 0.0013 21.7 4.9 39 53-92 66-108 (140)
256 3r0j_A Possible two component 46.3 60 0.002 23.3 6.5 54 21-92 67-122 (250)
257 1vim_A Hypothetical protein AF 45.9 21 0.00071 25.5 3.8 29 49-77 101-129 (200)
258 1xzo_A BSSCO, hypothetical pro 45.7 36 0.0012 22.8 4.9 66 22-89 14-97 (174)
259 1dz3_A Stage 0 sporulation pro 45.3 54 0.0018 20.5 6.1 38 54-92 64-104 (130)
260 2qzs_A Glycogen synthase; glyc 44.9 24 0.00081 28.1 4.3 84 52-141 309-397 (485)
261 3kh7_A Thiol:disulfide interch 43.9 61 0.0021 22.1 5.9 69 19-90 34-113 (176)
262 1jx7_A Hypothetical protein YC 43.4 43 0.0015 21.2 4.8 44 24-73 38-81 (117)
263 2pln_A HP1043, response regula 43.1 35 0.0012 21.7 4.3 37 54-91 74-112 (137)
264 1i3c_A Response regulator RCP1 43.1 43 0.0015 21.8 4.8 38 54-92 77-118 (149)
265 1jeo_A MJ1247, hypothetical pr 42.7 19 0.00064 25.0 3.0 27 50-76 95-121 (180)
266 3cnb_A DNA-binding response re 42.7 41 0.0014 21.3 4.6 38 54-92 70-111 (143)
267 1a04_A Nitrate/nitrite respons 42.7 82 0.0028 21.8 7.1 38 54-92 67-106 (215)
268 2pwj_A Mitochondrial peroxired 42.5 17 0.00057 25.3 2.7 38 50-88 64-102 (171)
269 4hyl_A Stage II sporulation pr 42.4 51 0.0017 20.9 5.0 56 24-93 44-100 (117)
270 3kto_A Response regulator rece 42.2 46 0.0016 21.2 4.8 39 53-92 67-107 (136)
271 1rzu_A Glycogen synthase 1; gl 41.8 25 0.00087 27.9 4.0 82 53-141 309-396 (485)
272 3gkn_A Bacterioferritin comigr 41.5 50 0.0017 21.9 5.1 40 49-89 54-93 (163)
273 3eod_A Protein HNR; response r 41.4 48 0.0016 20.7 4.8 38 54-92 67-106 (130)
274 2wfc_A Peroxiredoxin 5, PRDX5; 41.1 38 0.0013 23.3 4.5 39 50-89 52-91 (167)
275 1tp9_A Peroxiredoxin, PRX D (t 41.1 38 0.0013 22.9 4.4 39 50-89 56-95 (162)
276 2x6q_A Trehalose-synthase TRET 40.7 55 0.0019 25.3 5.8 86 52-141 248-346 (416)
277 2gs3_A PHGPX, GPX-4, phospholi 40.2 37 0.0013 23.4 4.3 68 19-89 27-114 (185)
278 1srr_A SPO0F, sporulation resp 40.1 57 0.002 20.1 4.9 38 54-92 63-102 (124)
279 3trj_A Phosphoheptose isomeras 40.1 21 0.00071 25.7 3.0 29 49-77 126-154 (201)
280 2i2w_A Phosphoheptose isomeras 39.7 17 0.00057 26.2 2.4 28 50-77 144-171 (212)
281 2r25_B Osmosensing histidine p 39.7 70 0.0024 20.2 5.4 38 54-92 68-108 (133)
282 2q5c_A NTRC family transcripti 39.6 59 0.002 23.4 5.4 18 54-71 84-101 (196)
283 1dbw_A Transcriptional regulat 39.4 53 0.0018 20.4 4.7 38 54-92 63-102 (126)
284 2p31_A CL683, glutathione pero 39.4 31 0.0011 23.8 3.7 67 20-89 28-115 (181)
285 2obi_A PHGPX, GPX-4, phospholi 38.6 33 0.0011 23.6 3.8 68 19-89 25-112 (183)
286 3oy2_A Glycosyltransferase B73 38.3 54 0.0018 25.2 5.4 84 54-141 203-304 (413)
287 3hdv_A Response regulator; PSI 38.2 53 0.0018 20.7 4.6 39 53-92 67-108 (136)
288 3cg0_A Response regulator rece 38.0 74 0.0025 19.9 6.1 38 54-92 71-109 (140)
289 2buf_A Acetylglutamate kinase; 37.9 68 0.0023 24.5 5.8 58 23-92 27-84 (300)
290 3b2n_A Uncharacterized protein 37.9 63 0.0021 20.4 4.9 38 54-92 65-104 (133)
291 3lte_A Response regulator; str 37.8 72 0.0025 19.8 6.5 53 21-92 50-106 (132)
292 3snk_A Response regulator CHEY 37.7 26 0.0009 22.3 3.0 37 55-92 76-114 (135)
293 1tmy_A CHEY protein, TMY; chem 37.6 58 0.002 19.9 4.6 38 54-92 63-102 (120)
294 4g2e_A Peroxiredoxin; redox pr 37.5 17 0.0006 24.6 2.1 39 50-89 50-88 (157)
295 2zos_A MPGP, mannosyl-3-phosph 37.3 11 0.00038 27.7 1.1 41 99-139 178-221 (249)
296 3grc_A Sensor protein, kinase; 36.9 26 0.0009 22.4 2.9 25 53-77 65-93 (140)
297 3s2u_A UDP-N-acetylglucosamine 36.8 56 0.0019 25.4 5.3 89 49-140 16-121 (365)
298 2oqr_A Sensory transduction pr 36.2 1.1E+02 0.0037 21.3 6.4 55 21-93 48-103 (230)
299 3ixr_A Bacterioferritin comigr 35.8 48 0.0017 22.8 4.3 39 50-89 71-109 (179)
300 1qv9_A F420-dependent methylen 35.8 24 0.00083 27.2 2.7 41 48-89 75-115 (283)
301 2iuy_A Avigt4, glycosyltransfe 35.6 94 0.0032 23.1 6.2 90 49-141 173-272 (342)
302 2v5h_A Acetylglutamate kinase; 35.5 61 0.0021 25.2 5.3 59 23-93 50-108 (321)
303 1r30_A Biotin synthase; SAM ra 35.4 81 0.0028 24.6 6.0 76 51-137 134-210 (369)
304 1k66_A Phytochrome response re 35.3 41 0.0014 21.4 3.7 38 54-92 78-119 (149)
305 3fxa_A SIS domain protein; str 35.2 25 0.00086 24.8 2.7 28 50-77 105-132 (201)
306 3ny7_A YCHM protein, sulfate t 35.0 54 0.0018 21.2 4.2 64 21-98 45-108 (118)
307 1jbe_A Chemotaxis protein CHEY 34.9 52 0.0018 20.4 4.1 38 54-92 65-106 (128)
308 4g63_A Cytosolic IMP-GMP speci 34.9 16 0.00054 30.6 1.7 18 19-36 14-31 (470)
309 3etn_A Putative phosphosugar i 34.8 49 0.0017 24.0 4.4 28 50-77 119-148 (220)
310 1jfu_A Thiol:disulfide interch 34.6 33 0.0011 23.5 3.2 66 21-89 40-119 (186)
311 2pl1_A Transcriptional regulat 34.5 71 0.0024 19.4 4.7 38 54-92 60-99 (121)
312 3nwy_A Uridylate kinase; allos 34.3 93 0.0032 23.9 6.0 30 55-85 243-272 (281)
313 2xvl_A Alpha-xylosidase, putat 34.2 1.2E+02 0.0042 27.8 7.5 47 22-71 464-510 (1020)
314 1p6q_A CHEY2; chemotaxis, sign 34.2 48 0.0016 20.6 3.8 38 54-92 67-108 (129)
315 2rjn_A Response regulator rece 33.9 95 0.0032 20.0 5.9 40 21-77 51-92 (154)
316 1nm3_A Protein HI0572; hybrid, 33.6 75 0.0026 22.9 5.2 39 50-89 54-93 (241)
317 3nsx_A Alpha-glucosidase; stru 33.6 1.2E+02 0.0041 26.2 7.2 45 22-71 194-238 (666)
318 3cu5_A Two component transcrip 33.5 55 0.0019 21.0 4.1 23 54-76 65-89 (141)
319 3crn_A Response regulator rece 33.3 84 0.0029 19.7 5.0 38 54-92 63-102 (132)
320 1we0_A Alkyl hydroperoxide red 33.2 46 0.0016 22.9 3.8 37 49-86 50-86 (187)
321 3uma_A Hypothetical peroxiredo 33.1 46 0.0016 23.5 3.8 39 50-89 77-116 (184)
322 1f2r_I Inhibitor of caspase-ac 33.1 77 0.0026 20.7 4.6 37 3-39 38-75 (100)
323 3kts_A Glycerol uptake operon 32.8 1.3E+02 0.0044 21.9 6.3 82 55-138 20-105 (192)
324 4f82_A Thioredoxin reductase; 32.4 78 0.0027 22.5 5.0 39 50-89 68-107 (176)
325 2v1m_A Glutathione peroxidase; 32.3 51 0.0017 21.8 3.9 40 49-89 49-97 (169)
326 3i42_A Response regulator rece 32.2 71 0.0024 19.7 4.4 40 21-77 47-90 (127)
327 3jx9_A Putative phosphoheptose 32.2 32 0.0011 24.6 2.8 28 50-77 90-118 (170)
328 3nhm_A Response regulator; pro 32.1 30 0.001 21.8 2.5 25 53-77 62-90 (133)
329 1qo0_D AMIR; binding protein, 32.1 1.2E+02 0.0041 20.6 6.0 36 56-92 69-106 (196)
330 3fw2_A Thiol-disulfide oxidore 32.1 33 0.0011 22.5 2.8 40 49-89 53-94 (150)
331 1uas_A Alpha-galactosidase; TI 31.9 96 0.0033 24.3 5.9 38 51-89 74-125 (362)
332 2va1_A Uridylate kinase; UMPK, 31.7 92 0.0032 23.1 5.5 29 55-84 218-246 (256)
333 3mng_A Peroxiredoxin-5, mitoch 31.6 54 0.0019 22.8 4.0 38 51-89 65-103 (173)
334 1nri_A Hypothetical protein HI 31.3 43 0.0015 25.7 3.7 29 49-77 152-180 (306)
335 2bmx_A Alkyl hydroperoxidase C 31.2 91 0.0031 21.5 5.2 37 49-86 64-100 (195)
336 3cfy_A Putative LUXO repressor 31.1 93 0.0032 19.7 4.9 38 54-92 64-103 (137)
337 2bty_A Acetylglutamate kinase; 30.8 94 0.0032 23.4 5.5 69 10-92 11-79 (282)
338 1xhf_A DYE resistance, aerobic 30.7 89 0.003 19.1 4.7 38 54-92 63-101 (123)
339 4gqc_A Thiol peroxidase, perox 30.4 48 0.0016 22.6 3.5 36 22-62 122-157 (164)
340 2vup_A Glutathione peroxidase- 30.4 35 0.0012 23.7 2.8 40 49-89 66-114 (190)
341 3qhp_A Type 1 capsular polysac 30.3 1.1E+02 0.0039 19.9 5.9 83 51-140 15-105 (166)
342 2qzj_A Two-component response 30.2 81 0.0028 20.0 4.5 38 54-92 64-102 (136)
343 1mb3_A Cell division response 30.1 42 0.0014 20.7 2.9 38 54-92 61-102 (124)
344 3imk_A Putative molybdenum car 29.9 1.2E+02 0.0042 21.4 5.5 54 26-89 71-130 (158)
345 3kij_A Probable glutathione pe 29.8 29 0.001 23.8 2.3 66 22-90 19-105 (180)
346 1sen_A Thioredoxin-like protei 29.8 89 0.0031 21.1 4.8 15 21-35 104-118 (164)
347 2lrn_A Thiol:disulfide interch 29.7 59 0.002 21.2 3.8 39 50-89 48-87 (152)
348 3lor_A Thiol-disulfide isomera 29.7 45 0.0015 21.9 3.2 39 50-89 50-95 (160)
349 1th8_B Anti-sigma F factor ant 29.6 55 0.0019 20.5 3.5 57 22-92 43-100 (116)
350 3j08_A COPA, copper-exporting 29.5 20 0.00069 30.8 1.6 20 20-39 324-343 (645)
351 4hwg_A UDP-N-acetylglucosamine 29.3 1.2E+02 0.0039 24.0 6.0 82 55-140 27-123 (385)
352 3ia7_A CALG4; glycosysltransfe 29.1 1.8E+02 0.0063 21.9 8.9 34 52-89 20-53 (402)
353 2ap9_A NAG kinase, acetylgluta 29.0 97 0.0033 23.6 5.3 58 23-92 26-83 (299)
354 3lwa_A Secreted thiol-disulfid 29.0 34 0.0012 23.3 2.5 40 49-89 77-124 (183)
355 3n53_A Response regulator rece 28.9 20 0.00068 23.1 1.2 40 21-77 46-89 (140)
356 3tsa_A SPNG, NDP-rhamnosyltran 28.9 1.7E+02 0.0057 22.2 6.8 33 53-89 18-50 (391)
357 3raz_A Thioredoxin-related pro 28.6 14 0.00047 24.5 0.3 39 50-89 43-81 (151)
358 3cvj_A Putative phosphoheptose 28.4 36 0.0012 24.9 2.7 26 49-74 120-145 (243)
359 2p5q_A Glutathione peroxidase 28.4 38 0.0013 22.5 2.6 65 22-89 13-98 (170)
360 1f0k_A MURG, UDP-N-acetylgluco 28.3 1.2E+02 0.0039 22.7 5.7 76 54-141 203-281 (364)
361 2qvg_A Two component response 28.3 53 0.0018 20.8 3.3 54 20-91 58-115 (143)
362 3u5r_E Uncharacterized protein 28.3 27 0.00094 25.0 1.9 40 49-89 77-124 (218)
363 2a9o_A Response regulator; ess 28.1 1E+02 0.0034 18.6 4.5 38 54-92 61-99 (120)
364 3eua_A Putative fructose-amino 28.1 72 0.0025 24.6 4.5 29 49-77 86-114 (329)
365 2jjx_A Uridylate kinase, UMP k 28.0 95 0.0033 23.0 5.0 66 20-89 10-75 (255)
366 3utn_X Thiosulfate sulfurtrans 28.0 52 0.0018 25.8 3.6 63 20-90 72-141 (327)
367 2qsj_A DNA-binding response re 27.9 88 0.003 20.1 4.4 55 20-92 49-105 (154)
368 2pju_A Propionate catabolism o 27.7 1.5E+02 0.005 21.9 6.0 19 122-140 142-160 (225)
369 1kgs_A DRRD, DNA binding respo 27.6 84 0.0029 21.8 4.5 40 21-77 46-87 (225)
370 3l4y_A Maltase-glucoamylase, i 27.5 1.8E+02 0.0061 26.1 7.4 45 22-71 321-365 (875)
371 3fro_A GLGA glycogen synthase; 27.4 58 0.002 25.0 3.8 84 51-140 268-360 (439)
372 1z9d_A Uridylate kinase, UK, U 27.4 85 0.0029 23.2 4.6 49 22-73 7-55 (252)
373 2e9y_A Carbamate kinase; trans 27.3 52 0.0018 25.5 3.5 63 23-92 5-72 (316)
374 2g3m_A Maltase, alpha-glucosid 27.2 1.5E+02 0.0053 25.6 6.8 46 22-72 206-251 (693)
375 1vjr_A 4-nitrophenylphosphatas 27.2 39 0.0013 24.4 2.7 91 48-141 137-240 (271)
376 1h4x_A SPOIIAA, anti-sigma F f 27.2 66 0.0022 20.2 3.5 57 22-92 42-99 (117)
377 2rd5_A Acetylglutamate kinase- 27.1 99 0.0034 23.5 5.1 59 22-92 36-94 (298)
378 2gwr_A DNA-binding response re 27.1 95 0.0032 22.0 4.8 38 54-92 65-103 (238)
379 2eel_A Cell death activator CI 27.0 61 0.0021 20.9 3.2 33 3-36 29-61 (91)
380 2bfw_A GLGA glycogen synthase; 27.0 74 0.0025 21.6 4.0 84 51-141 53-146 (200)
381 3rqi_A Response regulator prot 26.5 1E+02 0.0036 20.8 4.8 38 54-92 67-106 (184)
382 3t7v_A Methylornithine synthas 26.4 1.2E+02 0.0042 23.2 5.6 78 51-137 126-204 (350)
383 1zof_A Alkyl hydroperoxide-red 26.2 57 0.0019 22.7 3.3 36 49-85 52-87 (198)
384 2l5o_A Putative thioredoxin; s 26.2 1.3E+02 0.0045 19.2 5.1 39 50-89 47-87 (153)
385 3pnx_A Putative sulfurtransfer 25.9 55 0.0019 23.1 3.1 24 50-73 101-124 (160)
386 2zj3_A Glucosamine--fructose-6 25.8 81 0.0028 24.9 4.5 29 49-77 119-147 (375)
387 1tzb_A Glucose-6-phosphate iso 25.6 57 0.0019 24.9 3.4 26 49-74 91-116 (302)
388 1j5x_A Glucosamine-6-phosphate 25.5 78 0.0027 24.6 4.3 29 49-77 112-140 (342)
389 2poc_A D-fructose-6- PH, isome 25.4 78 0.0027 24.8 4.3 29 49-77 109-137 (367)
390 2ayx_A Sensor kinase protein R 25.3 1.6E+02 0.0055 21.3 5.8 54 21-92 173-228 (254)
391 1zgz_A Torcad operon transcrip 25.2 1.2E+02 0.0041 18.4 5.5 38 54-92 62-100 (122)
392 2ywr_A Phosphoribosylglycinami 25.1 1.2E+02 0.004 22.2 4.9 39 52-91 14-55 (216)
393 2a4v_A Peroxiredoxin DOT5; yea 25.0 94 0.0032 20.5 4.2 38 50-89 55-92 (159)
394 2qr3_A Two-component system re 25.0 59 0.002 20.4 3.0 38 54-92 68-107 (140)
395 3fj1_A Putative phosphosugar i 25.0 78 0.0027 24.7 4.2 29 49-77 103-131 (344)
396 1jei_A Emerin; membrane protei 24.8 25 0.00086 20.4 0.9 32 54-86 9-40 (53)
397 1zh2_A KDP operon transcriptio 24.7 1.1E+02 0.0037 18.5 4.2 38 54-92 61-99 (121)
398 1mvo_A PHOP response regulator 24.7 77 0.0026 19.8 3.5 38 54-92 63-102 (136)
399 3bre_A Probable two-component 24.6 1.5E+02 0.0053 22.2 5.8 38 54-92 79-120 (358)
400 2r37_A Glutathione peroxidase 24.5 1.5E+02 0.0052 21.1 5.4 66 20-89 16-108 (207)
401 1ybd_A Uridylate kinase; alpha 24.3 1.3E+02 0.0043 21.8 5.1 61 22-89 7-70 (239)
402 1yio_A Response regulatory pro 24.1 81 0.0028 21.6 3.8 38 54-92 64-103 (208)
403 3eyt_A Uncharacterized protein 24.0 23 0.00079 23.4 0.8 39 50-89 48-93 (158)
404 2hqr_A Putative transcriptiona 24.0 94 0.0032 21.6 4.2 38 54-92 56-95 (223)
405 1qmv_A Human thioredoxin perox 23.8 49 0.0017 23.0 2.6 36 50-86 54-89 (197)
406 3lpp_A Sucrase-isomaltase; gly 23.8 2.3E+02 0.0077 25.6 7.3 46 22-72 349-394 (898)
407 2h01_A 2-Cys peroxiredoxin; th 23.8 55 0.0019 22.6 2.8 37 49-86 50-86 (192)
408 2a3n_A Putative glucosamine-fr 23.6 91 0.0031 24.3 4.3 29 49-77 114-142 (355)
409 3rsc_A CALG2; TDP, enediyne, s 23.4 2.5E+02 0.0085 21.4 8.1 32 53-88 37-68 (415)
410 3p7x_A Probable thiol peroxida 23.2 70 0.0024 21.4 3.2 37 21-62 129-165 (166)
411 3g68_A Putative phosphosugar i 23.2 66 0.0022 25.2 3.4 29 49-77 94-122 (352)
412 3fkf_A Thiol-disulfide oxidore 23.1 58 0.002 20.8 2.7 40 49-89 51-92 (148)
413 2j07_A Deoxyribodipyrimidine p 23.0 53 0.0018 26.6 2.9 44 48-92 49-92 (420)
414 3zxn_A RSBS, anti-sigma-factor 23.0 1.6E+02 0.0055 19.1 5.8 57 20-89 41-97 (123)
415 3gl3_A Putative thiol:disulfid 22.8 61 0.0021 20.9 2.8 40 49-89 46-86 (152)
416 3fkj_A Putative phosphosugar i 22.8 74 0.0025 24.9 3.7 29 49-77 101-129 (347)
417 3fk8_A Disulphide isomerase; A 22.6 50 0.0017 21.1 2.3 17 19-35 90-106 (133)
418 2r60_A Glycosyl transferase, g 22.6 73 0.0025 25.4 3.7 62 75-141 321-389 (499)
419 1n8j_A AHPC, alkyl hydroperoxi 22.6 1.2E+02 0.0041 20.9 4.4 36 50-86 50-85 (186)
420 2lpm_A Two-component response 22.6 29 0.00099 23.1 1.1 24 54-77 69-92 (123)
421 3ghf_A Septum site-determining 22.5 1.7E+02 0.0059 19.3 5.2 38 52-90 62-99 (120)
422 3ira_A Conserved protein; meth 22.4 2E+02 0.007 20.0 5.7 44 18-63 102-145 (173)
423 2we5_A Carbamate kinase 1; arg 22.1 81 0.0028 24.2 3.7 62 23-92 3-68 (310)
424 1ass_A Thermosome; chaperonin, 22.1 1.5E+02 0.0052 20.5 4.9 36 53-89 61-96 (159)
425 3tov_A Glycosyl transferase fa 22.0 2.3E+02 0.008 21.7 6.4 82 50-139 203-285 (349)
426 2xry_A Deoxyribodipyrimidine p 21.9 56 0.0019 26.8 2.9 44 48-92 89-132 (482)
427 1psq_A Probable thiol peroxida 21.8 89 0.0031 20.8 3.5 37 21-62 126-162 (163)
428 3knz_A Putative sugar binding 21.8 76 0.0026 25.1 3.5 29 49-77 109-137 (366)
429 3hba_A Putative phosphosugar i 21.4 77 0.0026 24.7 3.5 29 49-77 102-130 (334)
430 3oti_A CALG3; calicheamicin, T 21.1 2.5E+02 0.0085 21.4 6.4 75 52-140 251-325 (398)
431 2f8a_A Glutathione peroxidase 21.1 55 0.0019 23.4 2.4 68 19-89 24-118 (208)
432 2jk1_A HUPR, hydrogenase trans 21.0 1.3E+02 0.0046 18.8 4.2 39 54-92 60-100 (139)
433 3ph9_A Anterior gradient prote 20.9 1.6E+02 0.0054 20.0 4.7 43 20-62 100-142 (151)
434 3lrk_A Alpha-galactosidase 1; 20.9 2E+02 0.0068 24.0 6.0 60 5-73 47-116 (479)
435 2ywi_A Hypothetical conserved 20.9 43 0.0015 23.0 1.7 40 49-89 64-111 (196)
436 3tsm_A IGPS, indole-3-glycerol 20.9 2.8E+02 0.0096 21.0 8.9 85 52-141 157-249 (272)
437 4fnq_A Alpha-galactosidase AGA 20.8 2.2E+02 0.0074 24.8 6.5 49 21-72 359-413 (729)
438 4fo5_A Thioredoxin-like protei 20.8 22 0.00077 23.1 0.2 36 53-89 54-90 (143)
439 2ij9_A Uridylate kinase; struc 20.8 1.1E+02 0.0039 21.8 4.1 53 25-89 3-58 (219)
440 3c3m_A Response regulator rece 20.8 1.2E+02 0.004 19.2 3.8 23 54-76 63-89 (138)
441 4eo3_A Bacterioferritin comigr 20.6 64 0.0022 25.0 2.8 34 22-62 103-136 (322)
442 2qs7_A Uncharacterized protein 20.5 32 0.0011 23.5 1.0 23 51-73 85-108 (144)
443 3av3_A Phosphoribosylglycinami 20.2 1.6E+02 0.0055 21.3 4.9 37 53-90 17-56 (212)
444 2jba_A Phosphate regulon trans 20.2 36 0.0012 21.1 1.1 24 54-77 62-89 (127)
445 2p5x_A ASMTL, N-acetylserotoni 20.1 46 0.0016 25.0 1.8 23 64-89 3-25 (230)
No 1
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=99.89 E-value=3e-23 Score=154.92 Aligned_cols=90 Identities=24% Similarity=0.234 Sum_probs=79.3
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH----hhCCCcc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL----FFFSISA 116 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~----~~~~~~~ 116 (149)
.++.||+.++++.|+++|++++++||+++.. +...++.+|+.++|+.+. ..||+| .+|.. .+++|++
T Consensus 83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~-~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p--~~~~~a~~~lg~~p~e 159 (216)
T 3kbb_A 83 LKENPGVREALEFVKSKRIKLALATSTPQRE-ALERLRRLDLEKYFDVMVFGDQVKNGKPDP--EIYLLVLERLNVVPEK 159 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCGGGCSEEECGGGSSSCTTST--HHHHHHHHHHTCCGGG
T ss_pred cccCccHHHHHHHHHHcCCCcccccCCcHHH-HHHHHHhcCCCccccccccccccCCCcccH--HHHHHHHHhhCCCccc
Confidence 4688999999999999999999999999988 799999999999998652 347777 55554 6788999
Q ss_pred eEEEeehHhHHHHHHHhCCchhh
Q 032013 117 FILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 117 ~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
|++++||+++|++|++|||++|.
T Consensus 160 ~l~VgDs~~Di~aA~~aG~~~i~ 182 (216)
T 3kbb_A 160 VVVFEDSKSGVEAAKSAGIERIY 182 (216)
T ss_dssp EEEEECSHHHHHHHHHTTCCCEE
T ss_pred eEEEecCHHHHHHHHHcCCcEEE
Confidence 99999999999999999999874
No 2
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=99.89 E-value=1e-22 Score=149.00 Aligned_cols=119 Identities=13% Similarity=0.108 Sum_probs=94.5
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCc---------------hHHHHHHHHHc
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA---------------PDIAKTFLHKL 86 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~---------------~~i~~~~l~~~ 86 (149)
+|+++||+||||++....+....+..+++||+.++|++|+++|++++|+||++. .. +...++.+
T Consensus 1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 79 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDK-MHRALAQM 79 (179)
T ss_dssp CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHH-HHHHHHHT
T ss_pred CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHH-HHHHHHhC
Confidence 478999999999985322223334568999999999999999999999999986 45 57888899
Q ss_pred C--CCCCccc-------ccccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhhh
Q 032013 87 G--IHSMFVP-------MVRLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 87 g--l~~~f~~-------~~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
| +..+|.. ....||+|..+..+. .+++|++|++++|++++|.+|++|||+++.+.
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 145 (179)
T 3l8h_A 80 GGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQ 145 (179)
T ss_dssp TCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEES
T ss_pred CCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEEC
Confidence 9 7776632 134588885544443 66888999999999999999999999988764
No 3
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=99.88 E-value=2e-22 Score=154.82 Aligned_cols=90 Identities=22% Similarity=0.136 Sum_probs=76.5
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH----hhCCCcc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL----FFFSISA 116 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~----~~~~~~~ 116 (149)
..++||+.++++.|+++|++++++||+.. +...++.+|+..+|+.+. ..||+| ++|+. .+++|++
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~---~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p--~~~~~a~~~lg~~p~e 168 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN---APTILAALELREFFTFCADASQLKNSKPDP--EIFLAACAGLGVPPQA 168 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT---HHHHHHHTTCGGGCSEECCGGGCSSCTTST--HHHHHHHHHHTSCGGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc---hhhhhhhhhhccccccccccccccCCCCcH--HHHHHHHHHcCCChHH
Confidence 35789999999999999999999999764 356799999999998762 347777 55554 6788999
Q ss_pred eEEEeehHhHHHHHHHhCCchhhhh
Q 032013 117 FILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 117 ~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
|++++||++||+||++|||++|.+.
T Consensus 169 ~l~VgDs~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 169 CIGIEDAQAGIDAINASGMRSVGIG 193 (243)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEES
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 9999999999999999999998653
No 4
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.87 E-value=1.7e-22 Score=151.25 Aligned_cols=92 Identities=18% Similarity=0.182 Sum_probs=77.2
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccc----cCCChhHHHHHH--hhCCCcceEEE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVR----LSCCIMCIIFFL--FFFSISAFILF 120 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~----~~p~p~~~i~~~--~~~~~~~~l~~ 120 (149)
..++||+.++|+.|++ |++++++||++... ++..++.+|+..+|+.+.. .||+|.++..+. .+++|++|++|
T Consensus 83 ~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSS-SYPLYITTTKDTST-AQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp CEECTTHHHHHHHHHT-TSCEEEEEEEEHHH-HHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCCHHHHHHHHHc-CCeEEEEeCCCHHH-HHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 4678999999999999 99999999999888 6899999999999987532 366664333333 56888999999
Q ss_pred eehHhHHHHHHHhCCchhhh
Q 032013 121 VDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 121 eDs~~gi~aa~~ag~~~~~~ 140 (149)
+||++||++|++|||+++.+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v 180 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAI 180 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHHCCCcEEEE
Confidence 99999999999999998754
No 5
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=99.86 E-value=8.4e-22 Score=151.68 Aligned_cols=92 Identities=16% Similarity=0.079 Sum_probs=75.7
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++||+.++++.|+++|++++++|++. . +...++.+|+.++|+.+. ..||+|.++..+. .+++|++|+
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~-~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 191 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--N-AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCI 191 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--T-HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred cccchhHHHHHHHHHhcccccccccccc--h-hhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeE
Confidence 4578999999999999999999887764 3 467899999999998762 3477774443333 678899999
Q ss_pred EEeehHhHHHHHHHhCCchhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+++||+++|+||++|||++|.+.
T Consensus 192 ~VGDs~~Di~aA~~aG~~~i~v~ 214 (250)
T 4gib_A 192 GIEDASAGIDAINSANMFSVGVG 214 (250)
T ss_dssp EEESSHHHHHHHHHTTCEEEEES
T ss_pred EECCCHHHHHHHHHcCCEEEEEC
Confidence 99999999999999999998653
No 6
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=99.86 E-value=1.5e-21 Score=144.72 Aligned_cols=119 Identities=29% Similarity=0.421 Sum_probs=95.3
Q ss_pred CCccEEEEecCCccccccccc---------------cccCCCCccCccHHHHHHHHHHCCceEEEEeCCC-chHHHHHHH
Q 032013 20 NLPRLVVFDLDYTLWPFYCEC---------------CYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP-APDIAKTFL 83 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~---------------~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~-~~~i~~~~l 83 (149)
.++++|+||+||||++.+... ....+...+.||+.++|++|+++|++++|+||++ +.. ++..+
T Consensus 25 ~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~-~~~~l 103 (187)
T 2wm8_A 25 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEG-ANQLL 103 (187)
T ss_dssp TSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHH-HHHHH
T ss_pred hccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHH-HHHHH
Confidence 358999999999999643210 0012335789999999999999999999999998 577 79999
Q ss_pred HHcCCCCCccccc-ccCCChhHHHHHH----hhCCCcceEEEeehHhHHHHHHHhCCchhhhh
Q 032013 84 HKLGIHSMFVPMV-RLSCCIMCIIFFL----FFFSISAFILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 84 ~~~gl~~~f~~~~-~~~p~p~~~i~~~----~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+.+|+..+|+.+. ..+|+| ..|.. .+++|++|++++|+++++.+|++||++++.+.
T Consensus 104 ~~~gl~~~f~~~~~~~~~k~--~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~ 164 (187)
T 2wm8_A 104 ELFDLFRYFVHREIYPGSKI--THFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQ 164 (187)
T ss_dssp HHTTCTTTEEEEEESSSCHH--HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECS
T ss_pred HHcCcHhhcceeEEEeCchH--HHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEEC
Confidence 9999999998753 335555 44443 56888999999999999999999999988654
No 7
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=99.86 E-value=3.4e-21 Score=143.10 Aligned_cols=120 Identities=18% Similarity=0.095 Sum_probs=96.2
Q ss_pred ccEEEEecCCcccccccc-----ccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCc---hHHHHHHHHHcCCCCCcc
Q 032013 22 PRLVVFDLDYTLWPFYCE-----CCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA---PDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~-----~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~---~~i~~~~l~~~gl~~~f~ 93 (149)
+++|+||+||||++.... .........++||+.++|++|+++|++++|+||++. .. +...++.+|+..+|+
T Consensus 3 ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~-~~~~l~~~gl~~~fd 81 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEV-IKRVLTNFGIIDYFD 81 (189)
T ss_dssp CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHH-HHHHHHHTTCGGGEE
T ss_pred ceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHH-HHHHHHhcCchhheE
Confidence 789999999999873221 112233468999999999999999999999999987 66 799999999999988
Q ss_pred ccc----------ccCCChhHHHHHH--hhCCCcceEEEeeh-HhHHHHHHHhCCchhhhhh
Q 032013 94 PMV----------RLSCCIMCIIFFL--FFFSISAFILFVDL-FCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 94 ~~~----------~~~p~p~~~i~~~--~~~~~~~~l~~eDs-~~gi~aa~~ag~~~~~~~~ 142 (149)
.+. ..||+|..+..+. .+++|++|++++|+ .+++.+|++|||+++.+.+
T Consensus 82 ~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~ 143 (189)
T 3ib6_A 82 FIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQN 143 (189)
T ss_dssp EEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECC
T ss_pred EEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECC
Confidence 762 2266764433333 56888999999999 7999999999999998765
No 8
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=99.86 E-value=1.6e-21 Score=146.81 Aligned_cols=119 Identities=17% Similarity=0.060 Sum_probs=83.2
Q ss_pred CCccEEEEecCCcccccccccccc----CCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYE----DEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM 95 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~----~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~ 95 (149)
+.+++|+||+||||++........ .+...++||+.++|++|+++|++++|+||++... +...++ ..+..++...
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~-~~~~~~-~~~d~v~~~~ 81 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEAL-STPLAA-PVNDWMIAAP 81 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHH-HHHHHT-TTTTTCEECC
T ss_pred CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHH-HHHhcC-ccCCEEEECC
Confidence 457899999999999832110000 1224689999999999999999999999998776 444333 1111122212
Q ss_pred --cccCCChhHHHHHH--hhCCC-cceEEEeehHhHHHHHHHhCCchhhh
Q 032013 96 --VRLSCCIMCIIFFL--FFFSI-SAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 96 --~~~~p~p~~~i~~~--~~~~~-~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
...||+|..+..+. .++.+ ++|++++||++||++|++|||++|.+
T Consensus 82 ~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v 131 (196)
T 2oda_A 82 RPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGL 131 (196)
T ss_dssp CCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEE
T ss_pred cCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEE
Confidence 24577774444444 44554 78999999999999999999998865
No 9
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=99.85 E-value=2.1e-21 Score=135.16 Aligned_cols=110 Identities=14% Similarity=0.046 Sum_probs=92.2
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc-----
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV----- 96 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~----- 96 (149)
+++++||+||||++. ..++||+.++|++|+++|++++++||++... +...++.+|+..+|+.+.
T Consensus 2 ~k~i~~D~DgtL~~~----------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~-~~~~l~~~~l~~~f~~i~~~~~~ 70 (137)
T 2pr7_A 2 MRGLIVDYAGVLDGT----------DEDQRRWRNLLAAAKKNGVGTVILSNDPGGL-GAAPIRELETNGVVDKVLLSGEL 70 (137)
T ss_dssp CCEEEECSTTTTSSC----------HHHHHHHHHHHHHHHHTTCEEEEEECSCCGG-GGHHHHHHHHTTSSSEEEEHHHH
T ss_pred CcEEEEeccceecCC----------CccCccHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHCChHhhccEEEEeccC
Confidence 578999999999652 3588999999999999999999999999988 688999999988887652
Q ss_pred -ccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhhhh
Q 032013 97 -RLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 97 -~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
..||+|.....+. .+++|++|++++|+++++.+|+++|++++.+.+
T Consensus 71 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~ 119 (137)
T 2pr7_A 71 GVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQ 119 (137)
T ss_dssp SCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSC
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCC
Confidence 3577774443333 557778999999999999999999999987754
No 10
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=99.83 E-value=4.1e-20 Score=139.73 Aligned_cols=118 Identities=12% Similarity=-0.043 Sum_probs=91.5
Q ss_pred CCCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCc---------------hHHHHHHH
Q 032013 19 ENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA---------------PDIAKTFL 83 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~---------------~~i~~~~l 83 (149)
..++++++||+||||++...+ ....+...++||+.++|++|+++|++++|+||++. .. +...+
T Consensus 22 ~~~~k~v~~D~DGTL~~~~~~-~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~-~~~~l 99 (211)
T 2gmw_A 22 AKSVPAIFLDRDGTINVDHGY-VHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEW-MDWSL 99 (211)
T ss_dssp --CBCEEEECSBTTTBCCCSS-CCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHH-HHHHH
T ss_pred hhcCCEEEEcCCCCeECCCCc-ccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHH-HHHHH
Confidence 344789999999999985322 12233457899999999999999999999999983 56 68889
Q ss_pred HHcCCCCCcccc------------------cccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCch-hhh
Q 032013 84 HKLGIHSMFVPM------------------VRLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDL-YVY 140 (149)
Q Consensus 84 ~~~gl~~~f~~~------------------~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~-~~~ 140 (149)
+.+|+. |+.+ ...||+|.....+. .++++++|++++|++++|.+|++|||++ +.+
T Consensus 100 ~~~gl~--f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v 175 (211)
T 2gmw_A 100 ADRDVD--LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLV 175 (211)
T ss_dssp HHTTCC--CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred HHcCCc--eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEE
Confidence 999986 3321 23578885544443 5678899999999999999999999998 654
No 11
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=99.81 E-value=3.3e-20 Score=137.54 Aligned_cols=121 Identities=16% Similarity=0.106 Sum_probs=96.5
Q ss_pred CccEEEEecCCcccccccccc--------------------------------------ccCCCCccCccHHHHHHHHHH
Q 032013 21 LPRLVVFDLDYTLWPFYCECC--------------------------------------YEDEIPYLYPHAKGILEALKE 62 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~--------------------------------------~~~~~~~~~pg~~e~L~~Lk~ 62 (149)
++|+|+||+||||++....|. .......++|++.++|++|++
T Consensus 5 ~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 84 (205)
T 3m9l_A 5 EIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAG 84 (205)
T ss_dssp GCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECTTHHHHHHHHHH
T ss_pred cCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHh
Confidence 479999999999998533211 001234688999999999999
Q ss_pred CCceEEEEeCCCchHHHHHHHHHcCCCCCc--ccc-----cccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHh
Q 032013 63 KGIHVAVASRSPAPDIAKTFLHKLGIHSMF--VPM-----VRLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYV 133 (149)
Q Consensus 63 ~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f--~~~-----~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~a 133 (149)
+|++++++||++... +...++.+|+..+| +.+ ...||+|.+...+. .++++++|++|.|+.+++.+|++|
T Consensus 85 ~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~a 163 (205)
T 3m9l_A 85 RGYRLGILTRNAREL-AHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAA 163 (205)
T ss_dssp TTCEEEEECSSCHHH-HHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHH
T ss_pred cCCeEEEEeCCchHH-HHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHc
Confidence 999999999999888 79999999999888 443 23477775554444 567779999999999999999999
Q ss_pred CCchhhhhh
Q 032013 134 GCDLYVYKR 142 (149)
Q Consensus 134 g~~~~~~~~ 142 (149)
|++++.+.+
T Consensus 164 G~~~i~v~~ 172 (205)
T 3m9l_A 164 GTRTVLVNL 172 (205)
T ss_dssp TCEEEECSS
T ss_pred CCEEEEEeC
Confidence 998877643
No 12
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=99.81 E-value=5.4e-20 Score=134.87 Aligned_cols=94 Identities=15% Similarity=0.187 Sum_probs=80.6
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceEE
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFIL 119 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l~ 119 (149)
.++|++.++|++|+++|++++++||++... ++..++.+|+..+|+.+. ..||+|.+...+. .++++++|++
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 167 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKAD-IFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALI 167 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHH-HHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEE
Confidence 688999999999999999999999999888 799999999999888652 3477775544443 6688899999
Q ss_pred EeehHhHHHHHHHhCCchhhhhh
Q 032013 120 FVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 120 ~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
|.|+++++.+|++||++++.+.+
T Consensus 168 iGD~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 168 IEDSEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp EECSHHHHHHHHHTTCEEEEECC
T ss_pred EeccHhhHHHHHHCCCEEEEECC
Confidence 99999999999999999987654
No 13
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=99.81 E-value=3e-20 Score=145.16 Aligned_cols=91 Identities=18% Similarity=0.063 Sum_probs=72.7
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc--C-------------CCCCccccc-ccCCChhHHHHHH-
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL--G-------------IHSMFVPMV-RLSCCIMCIIFFL- 109 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~--g-------------l~~~f~~~~-~~~p~p~~~i~~~- 109 (149)
.+++||+.++|++ |++++|+||+++.. ++..++.+ | +..+|+... +.||+|.++..+.
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~-~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~ 198 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKA-QKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILR 198 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHH-HHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHH-HHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHH
Confidence 3567888888877 99999999999988 68888887 5 555666544 5688884444433
Q ss_pred -hhCCCcceEEEeehHhHHHHHHHhCCchhhhhh
Q 032013 110 -FFFSISAFILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 110 -~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
.+++|++|+++|||++||+||++|||+++.+.+
T Consensus 199 ~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 199 DIGAKASEVLFLSDNPLELDAAAGVGIATGLASR 232 (253)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred HcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence 678889999999999999999999999987654
No 14
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=99.81 E-value=4.3e-20 Score=136.38 Aligned_cols=119 Identities=13% Similarity=0.024 Sum_probs=92.0
Q ss_pred CCCccEEEEecCCcccccc--ccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC---------------CchHHHHH
Q 032013 19 ENLPRLVVFDLDYTLWPFY--CECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS---------------PAPDIAKT 81 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~~--~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~---------------~~~~i~~~ 81 (149)
.+.+++++||+||||++.. .++....+..+++||+.++|++|+++|++++|+||+ +... +..
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~-~~~ 89 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNL-MMQ 89 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHH-HHH
T ss_pred CCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHH-HHH
Confidence 4568999999999999852 122222344679999999999999999999999998 4555 688
Q ss_pred HHHHcCCCCCcccc-----------cccCCChhHHHHHH----hhCCCcceEEEeehHhHHHHHHHhCCchhhhhh
Q 032013 82 FLHKLGIHSMFVPM-----------VRLSCCIMCIIFFL----FFFSISAFILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 82 ~l~~~gl~~~f~~~-----------~~~~p~p~~~i~~~----~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
.++.+|+. |+.+ ...||+| .+|.. .+++|++|++++|+++++.+|++|||+++.+.+
T Consensus 90 ~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p--~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~ 161 (176)
T 2fpr_A 90 IFTSQGVQ--FDEVLICPHLPADECDCRKPKV--KLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDR 161 (176)
T ss_dssp HHHHTTCC--EEEEEEECCCGGGCCSSSTTSC--GGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBT
T ss_pred HHHHcCCC--eeEEEEcCCCCcccccccCCCH--HHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcC
Confidence 99999986 5433 1347777 55554 467889999999999999999999999987765
No 15
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=99.81 E-value=6.7e-20 Score=137.51 Aligned_cols=95 Identities=19% Similarity=0.211 Sum_probs=81.0
Q ss_pred CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCc-c
Q 032013 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSIS-A 116 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~-~ 116 (149)
...+.|++.++|++|+++|++++++||++... +...++.+|+..+|+.+. ..||+|.+...+. .+++++ +
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 179 (231)
T 3kzx_A 101 NFMLNDGAIELLDTLKENNITMAIVSNKNGER-LRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKE 179 (231)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTT
T ss_pred cceECcCHHHHHHHHHHCCCeEEEEECCCHHH-HHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccC
Confidence 46789999999999999999999999999888 799999999999888652 3477775544444 667888 9
Q ss_pred eEEEeehHhHHHHHHHhCCchhhhh
Q 032013 117 FILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 117 ~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
|++|+|+++++.+|++||+.++.+.
T Consensus 180 ~v~vGD~~~Di~~a~~aG~~~v~~~ 204 (231)
T 3kzx_A 180 VFFIGDSISDIQSAIEAGCLPIKYG 204 (231)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred EEEEcCCHHHHHHHHHCCCeEEEEC
Confidence 9999999999999999999988764
No 16
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=99.81 E-value=4.4e-20 Score=137.64 Aligned_cols=94 Identities=20% Similarity=0.204 Sum_probs=79.5
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++||+.++|+.|+++|++++++||+.... ++..++.+|+..+|+.+. ..||+|.+...+. .+++|++|+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i 163 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVF-SKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAI 163 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHH-HHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence 5689999999999999999999999998888 799999999999888762 2366664444443 668889999
Q ss_pred EEeehHhHHHHHHHhCCchhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+|+|+++++.+|++||++++.+.
T Consensus 164 ~iGD~~~Di~~a~~aG~~~i~v~ 186 (226)
T 3mc1_A 164 MIGDREYDVIGALKNNLPSIGVT 186 (226)
T ss_dssp EEESSHHHHHHHHTTTCCEEEES
T ss_pred EECCCHHHHHHHHHCCCCEEEEc
Confidence 99999999999999999887653
No 17
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=99.81 E-value=9e-20 Score=136.87 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=79.2
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++|++.++|++|+++|++++++||++... +...++.+|+..+|+.+. ..||+|.+...+. .+++|++|+
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 172 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQS-IDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL 172 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 3577999999999999999999999999888 689999999988887652 3477774444443 568889999
Q ss_pred EEeehHhHHHHHHHhCCchhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+|.|+.+++.+|++||+.++.+.
T Consensus 173 ~iGD~~~Di~~a~~aG~~~~~~~ 195 (232)
T 1zrn_A 173 FVASNAWDATGARYFGFPTCWIN 195 (232)
T ss_dssp EEESCHHHHHHHHHHTCCEEEEC
T ss_pred EEeCCHHHHHHHHHcCCEEEEEc
Confidence 99999999999999999988754
No 18
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=99.81 E-value=1.4e-19 Score=136.35 Aligned_cols=93 Identities=15% Similarity=0.029 Sum_probs=75.7
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc--ccc------cccCCChhHHHHHH--hhCCCcc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF--VPM------VRLSCCIMCIIFFL--FFFSISA 116 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f--~~~------~~~~p~p~~~i~~~--~~~~~~~ 116 (149)
..++||+.++|++|+++|++++++||++... +...++. ++..+| +.+ ...||+|.+...+. .+++|++
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 184 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTS-LLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNE 184 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC----CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHH-HHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhh
Confidence 5788999999999999999999999999887 6888888 999988 544 23577775444443 6788899
Q ss_pred eEEEeehHhHHHHHHHhCCchhhhh
Q 032013 117 FILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 117 ~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
|++|.|+++++.+|++||+.++.+.
T Consensus 185 ~i~vGD~~~Di~~a~~aG~~~i~v~ 209 (247)
T 3dv9_A 185 ALVIENAPLGVQAGVAAGIFTIAVN 209 (247)
T ss_dssp EEEEECSHHHHHHHHHTTSEEEEEC
T ss_pred eEEEeCCHHHHHHHHHCCCeEEEEc
Confidence 9999999999999999999987654
No 19
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=99.81 E-value=8.7e-20 Score=138.86 Aligned_cols=92 Identities=15% Similarity=0.092 Sum_probs=77.5
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++||+.++|+.|+++|++++++||++... ++..++.+|+. +|+.+. ..||+|.+...+. .+++|++|+
T Consensus 109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~ 186 (240)
T 2hi0_A 109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEA-VQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCV 186 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 4578999999999999999999999998887 68999999988 887642 3477775544444 668889999
Q ss_pred EEeehHhHHHHHHHhCCchhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
+|+||++++.+|++||++++.+
T Consensus 187 ~vGDs~~Di~~a~~aG~~~v~v 208 (240)
T 2hi0_A 187 YIGDSEIDIQTARNSEMDEIAV 208 (240)
T ss_dssp EEESSHHHHHHHHHTTCEEEEE
T ss_pred EEcCCHHHHHHHHHCCCeEEEE
Confidence 9999999999999999997654
No 20
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=99.80 E-value=5.9e-20 Score=132.63 Aligned_cols=115 Identities=17% Similarity=0.080 Sum_probs=90.5
Q ss_pred ccEEEEecCCccccccccccccCC-CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDE-IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~-~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p 100 (149)
+++++||+||||+++...+....+ ...+.|+..++|++|+++|++++|+||++... ++..++.+|+..+|+. .+|
T Consensus 9 ~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~l~~~gl~~~~~~---~kp 84 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAP-LITRLKELGVEEIYTG---SYK 84 (162)
T ss_dssp CCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHH-HHHHHHHTTCCEEEEC---C--
T ss_pred eeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHH-HHHHHHHcCCHhhccC---CCC
Confidence 789999999999985433221111 11345778899999999999999999999998 7999999999887764 678
Q ss_pred ChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 101 CIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 101 ~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
+|.....+. .++++++|+++.|+++++.+|++||+.+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~ 126 (162)
T 2p9j_A 85 KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR 126 (162)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec
Confidence 885544443 5577899999999999999999999998764
No 21
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=99.80 E-value=2.7e-19 Score=133.45 Aligned_cols=96 Identities=13% Similarity=0.155 Sum_probs=81.2
Q ss_pred CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcce
Q 032013 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAF 117 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~ 117 (149)
...+.|++.++|+.|+++|++++++||++... +...++.+|+..+|+.+. ..||+|.....+. .++++++|
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHS-IRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHH-HHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 45789999999999999999999999999888 699999999998887652 3477775544443 66888999
Q ss_pred EEEeehHhHHHHHHHhCCchhhhhh
Q 032013 118 ILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 118 l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
++|.|+++++.+|++||+.++.+.+
T Consensus 173 ~~iGD~~~Di~~a~~aG~~~~~~~~ 197 (230)
T 3um9_A 173 LFVSCNSWDATGAKYFGYPVCWINR 197 (230)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECT
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeC
Confidence 9999999999999999999988543
No 22
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=99.80 E-value=1.5e-19 Score=136.98 Aligned_cols=93 Identities=15% Similarity=0.003 Sum_probs=78.6
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc--ccc------cccCCChhHHHHHH--hhCCCcc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF--VPM------VRLSCCIMCIIFFL--FFFSISA 116 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f--~~~------~~~~p~p~~~i~~~--~~~~~~~ 116 (149)
..++|++.++|++|+++|++++++||++... +...++. ++..+| +.+ ...||+|.++..+. .+++|++
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 185 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLS-LLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADE 185 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHH-HHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGG
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHH-HHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 5789999999999999999999999999888 6888888 999999 544 23577775544444 5678899
Q ss_pred eEEEeehHhHHHHHHHhCCchhhhh
Q 032013 117 FILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 117 ~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
|++|+|+++++.+|++||+.++.+.
T Consensus 186 ~i~vGD~~~Di~~a~~aG~~~i~v~ 210 (243)
T 3qxg_A 186 AVVIENAPLGVEAGHKAGIFTIAVN 210 (243)
T ss_dssp EEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred eEEEeCCHHHHHHHHHCCCEEEEEe
Confidence 9999999999999999999988753
No 23
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=99.80 E-value=9.3e-20 Score=136.99 Aligned_cols=96 Identities=14% Similarity=0.080 Sum_probs=81.2
Q ss_pred CCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcc
Q 032013 45 EIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISA 116 (149)
Q Consensus 45 ~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~ 116 (149)
....++||+.++|+.|+++|++++++||+.... ++..++.+|+..+|+.+. ..||+|.+...+. .++++++
T Consensus 101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 179 (237)
T 4ex6_A 101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKA-ARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPER 179 (237)
T ss_dssp GGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHH-HHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred cCCccCCCHHHHHHHHHhCCCcEEEEcCCChHH-HHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 345689999999999999999999999999888 799999999998888652 3577775544444 6688899
Q ss_pred eEEEeehHhHHHHHHHhCCchhhhh
Q 032013 117 FILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 117 ~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
|++|+|+++++.+|++||++++.+.
T Consensus 180 ~i~vGD~~~Di~~a~~aG~~~i~v~ 204 (237)
T 4ex6_A 180 CVVIGDGVPDAEMGRAAGMTVIGVS 204 (237)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEES
T ss_pred eEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 9999999999999999999887653
No 24
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=99.80 E-value=1.8e-19 Score=136.24 Aligned_cols=93 Identities=16% Similarity=0.067 Sum_probs=78.8
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceEE
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFIL 119 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l~ 119 (149)
.++||+.++|++|+++|++++++||++... +...++.+|+..+|+.+. ..||+|.+...+. .+++|++|++
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 183 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEM-LQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCF 183 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 567999999999999999999999999888 799999999998887642 3477774444443 5688899999
Q ss_pred EeehHhHHHHHHHhCCchhhhh
Q 032013 120 FVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 120 ~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
|.|+.+++.+|++||+.++.+.
T Consensus 184 iGD~~~Di~~a~~aG~~~~~v~ 205 (240)
T 2no4_A 184 VSSNAWDLGGAGKFGFNTVRIN 205 (240)
T ss_dssp EESCHHHHHHHHHHTCEEEEEC
T ss_pred EeCCHHHHHHHHHCCCEEEEEC
Confidence 9999999999999999988754
No 25
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=99.80 E-value=2e-19 Score=135.60 Aligned_cols=95 Identities=22% Similarity=0.142 Sum_probs=79.8
Q ss_pred CCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcc
Q 032013 45 EIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISA 116 (149)
Q Consensus 45 ~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~ 116 (149)
....++||+.++|+.|+++|++++++||++... ++..++.+|+..+|+.+. ..||+|.+...+. .++++++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 158 (222)
T 2nyv_A 80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEEL-SKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEK 158 (222)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGG
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHH-HHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchh
Confidence 346789999999999999999999999998887 689999999988887653 3467775444443 5678899
Q ss_pred eEEEeehHhHHHHHHHhCCchhhh
Q 032013 117 FILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 117 ~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
|++++||.+++.+|++||+.++.+
T Consensus 159 ~~~vGD~~~Di~~a~~aG~~~i~v 182 (222)
T 2nyv_A 159 ALIVGDTDADIEAGKRAGTKTALA 182 (222)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEE
T ss_pred EEEECCCHHHHHHHHHCCCeEEEE
Confidence 999999999999999999997754
No 26
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=99.80 E-value=2.1e-19 Score=131.81 Aligned_cols=91 Identities=23% Similarity=0.209 Sum_probs=79.0
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..+.|++.++|++|+++|++++++||++... +...++.+|+..+|+.+. ..||+|.+...+. .+++|++|+
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 161 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQRE-ALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVV 161 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEE
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHh-HHHHHHhcChHHhcCEEeecccCCCCCcCcHHHHHHHHHcCCCCceEE
Confidence 5789999999999999999999999999888 799999999999887652 3477775544443 668889999
Q ss_pred EEeehHhHHHHHHHhCCchh
Q 032013 119 LFVDLFCFMYAAAYVGCDLY 138 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~ 138 (149)
+|.|+++++.+|++||++++
T Consensus 162 ~iGD~~~Di~~a~~aG~~~i 181 (216)
T 2pib_A 162 VFEDSKSGVEAAKSAGIERI 181 (216)
T ss_dssp EEECSHHHHHHHHHTTCCEE
T ss_pred EEeCcHHHHHHHHHcCCcEE
Confidence 99999999999999999988
No 27
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=99.79 E-value=2.9e-19 Score=133.26 Aligned_cols=94 Identities=16% Similarity=0.030 Sum_probs=80.3
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..+.|++.++|++|+++|++++++||+.... +...++.+|+..+|+.+. ..||+|.+...+. .++++++|+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i 168 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDT-ATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECL 168 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHH-HHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhh-HHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEE
Confidence 5789999999999999999999999999888 799999999999887652 3577775544444 567789999
Q ss_pred EEeehHhHHHHHHHhCCchhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+|.|+++++.+|++||++++.+.
T Consensus 169 ~iGD~~~Di~~a~~aG~~~i~v~ 191 (233)
T 3s6j_A 169 VIGDAIWDMLAARRCKATGVGLL 191 (233)
T ss_dssp EEESSHHHHHHHHHTTCEEEEEG
T ss_pred EEeCCHHhHHHHHHCCCEEEEEe
Confidence 99999999999999999888764
No 28
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=99.79 E-value=2.1e-19 Score=130.02 Aligned_cols=117 Identities=11% Similarity=-0.066 Sum_probs=89.7
Q ss_pred CCccEEEEecCCccccccccccccCCCCc-cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccccc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPY-LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRL 98 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~-~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~ 98 (149)
.++++++||+||||+++...+....+... ....-..+|++|+++|++++++||++... ++..++.+|+..+|...
T Consensus 2 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~~~~~gl~~~~~~~--- 77 (164)
T 3e8m_A 2 KEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEI-VRRRAEKLKVDYLFQGV--- 77 (164)
T ss_dssp CCCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHHTTCCEEEECSSCCHH-HHHHHHHTTCSEEECSC---
T ss_pred CcceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHHCCCEEEEEeCCChHH-HHHHHHHcCCCEeeccc---
Confidence 35899999999999996433222211111 11111236999999999999999999998 79999999998888764
Q ss_pred CCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 99 SCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 99 ~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
+|+|.....+. .++++++|+++.|+.+++.+|++||+.+++.
T Consensus 78 kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 121 (164)
T 3e8m_A 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA 121 (164)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC
Confidence 78885554444 5677899999999999999999999988773
No 29
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=99.79 E-value=3.5e-19 Score=133.26 Aligned_cols=95 Identities=13% Similarity=0.178 Sum_probs=80.3
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++|++.++|+.|+++|++++++||++... +...++.+|+..+|+.+. ..||+|.....+. .++++++|+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQM-LEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL 176 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHH-HHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHH-HHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence 5678999999999999999999999999888 799999999999988652 3477774444433 678889999
Q ss_pred EEeehHhHHHHHHHhCCchhhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
+|.|+.+++.+|++||+.++.+.+
T Consensus 177 ~vGD~~~Di~~a~~~G~~~~~v~~ 200 (233)
T 3umb_A 177 FVSSNGWDACGATWHGFTTFWINR 200 (233)
T ss_dssp EEESCHHHHHHHHHHTCEEEEECT
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcC
Confidence 999999999999999999987543
No 30
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=99.78 E-value=3.8e-19 Score=131.34 Aligned_cols=116 Identities=18% Similarity=0.038 Sum_probs=92.1
Q ss_pred CccEEEEecCCccccccccccccCCC-CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEI-PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLS 99 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~-~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~ 99 (149)
++++++||+||||++....+...++. ..+.+...++|++|+++|++++++||++... +...++.+|+..+|. ..+
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~-~~~~~~~lgl~~~~~---~~k 82 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPI-LRRRIADLGIKLFFL---GKL 82 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHH-HHHHHHHHTCCEEEE---SCS
T ss_pred CCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHH-HHHHHHHcCCceeec---CCC
Confidence 47999999999999853322211110 1245678899999999999999999999998 799999999988774 357
Q ss_pred CChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 100 CCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 100 p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
|+|...-.+. .++++++|+.+.|+.+++.++++||+.+++.
T Consensus 83 ~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 125 (180)
T 1k1e_A 83 EKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA 125 (180)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC
Confidence 7775544443 5688899999999999999999999988764
No 31
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=99.78 E-value=4.6e-19 Score=130.43 Aligned_cols=94 Identities=10% Similarity=0.011 Sum_probs=78.7
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..+.|++.++|+.|+++| +++++||++... +...++.+|+..+|+.+. ..||+|.....+. .++++++|+
T Consensus 85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~-~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 162 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDL-NEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162 (200)
T ss_dssp CCBCHHHHHHHHHHTTTS-EEEEEECCCHHH-HHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CccCccHHHHHHHHHHcC-CEEEEeCCcHHH-HHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 457899999999999999 999999999888 689999999988887652 3577774443333 568889999
Q ss_pred EEeehHhHHHHHHHhCCchhhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
+++|+++++.+|++||++++.+.+
T Consensus 163 ~vgD~~~Di~~a~~aG~~~~~~~~ 186 (200)
T 3cnh_A 163 MVDDRLQNVQAARAVGMHAVQCVD 186 (200)
T ss_dssp EEESCHHHHHHHHHTTCEEEECSC
T ss_pred EeCCCHHHHHHHHHCCCEEEEECC
Confidence 999999999999999999987653
No 32
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=99.78 E-value=1.1e-18 Score=133.49 Aligned_cols=93 Identities=13% Similarity=0.086 Sum_probs=78.2
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++||+.++|+.|+ |++++++||++... +...++.+|+..+|+.+. ..||+|.+...+. .+++|++|+
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 168 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDM-LQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHH-HHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCcCHHH-HHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 367899999999999 99999999999888 789999999998887652 3477774444443 567889999
Q ss_pred EEeehHhHHHHHHHhCCchhhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
+|.|+.++|.+|++||+.++.+.+
T Consensus 169 ~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 169 FVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp EEESCHHHHHHHHHHTCEEEEECC
T ss_pred EEeCChhhHHHHHHCCCEEEEECC
Confidence 999999999999999999987654
No 33
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=99.78 E-value=9.2e-19 Score=133.75 Aligned_cols=94 Identities=26% Similarity=0.403 Sum_probs=79.5
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++||+.++|++|+++|++++++||++... ++..++.+|+..+|+.+. ..||+|.+...+. .++++++|+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 191 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKH-VQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQIL 191 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHH-HHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEE
Confidence 4677999999999999999999999999887 799999999988887652 3477775554444 567889999
Q ss_pred EEeehHhHHHHHHHhCCchhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+++|+++++.+|++||+.++.+.
T Consensus 192 ~vGD~~~Di~~a~~aG~~~i~v~ 214 (243)
T 2hsz_A 192 FVGDSQNDIFAAHSAGCAVVGLT 214 (243)
T ss_dssp EEESSHHHHHHHHHHTCEEEEES
T ss_pred EEcCCHHHHHHHHHCCCeEEEEc
Confidence 99999999999999999987653
No 34
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=99.77 E-value=7.8e-19 Score=131.60 Aligned_cols=90 Identities=21% Similarity=0.103 Sum_probs=73.5
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceEEE
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFILF 120 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l~~ 120 (149)
++||+.++|+.|+++|++++++||++. +...++.+|+..+|+.+. ..||+|.+...+. .+++|++|++|
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v 169 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN---APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI 169 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh---HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence 799999999999999999999999854 478899999999988752 3477775554444 67888999999
Q ss_pred eehHhHHHHHHHhCCchhhhh
Q 032013 121 VDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 121 eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+|++++|.+|++||+.++.+.
T Consensus 170 GDs~~Di~~a~~aG~~~~~~~ 190 (233)
T 3nas_A 170 EDAEAGISAIKSAGMFAVGVG 190 (233)
T ss_dssp ECSHHHHHHHHHTTCEEEECC
T ss_pred eCCHHHHHHHHHcCCEEEEEC
Confidence 999999999999999988764
No 35
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=99.77 E-value=2.5e-19 Score=132.97 Aligned_cols=90 Identities=14% Similarity=0.050 Sum_probs=77.0
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc----------------ccCCChhHHHHHH-
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV----------------RLSCCIMCIIFFL- 109 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~----------------~~~p~p~~~i~~~- 109 (149)
.++.|++.++|+.|+++|++++++||++... ++..++.+|+..+|+... ..+|+| .+|..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~--~~~~~~ 150 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLA-TNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKG--EMLLVL 150 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHH-HHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHH--HHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhH-HHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChH--HHHHHH
Confidence 5789999999999999999999999999888 799999999998887652 235555 55554
Q ss_pred ---hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 110 ---FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 110 ---~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.++++++|++|.||++++.+|++||+.+.+
T Consensus 151 ~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 151 QRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp HHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred HHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 578889999999999999999999998765
No 36
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=99.77 E-value=9.8e-19 Score=132.26 Aligned_cols=119 Identities=13% Similarity=0.027 Sum_probs=92.2
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCc---------------hHHHHHHHH
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA---------------PDIAKTFLH 84 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~---------------~~i~~~~l~ 84 (149)
.++++++||+||||++...+. .......++||+.++|++|+++|++++|+||++. .. +...++
T Consensus 29 ~~~k~i~~D~DGtl~~~~~y~-~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~-~~~~l~ 106 (218)
T 2o2x_A 29 PHLPALFLDRDGTINVDTDYP-SDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGR-VLELLR 106 (218)
T ss_dssp SSCCCEEECSBTTTBCCCSCT-TCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHH-HHHHHH
T ss_pred hcCCEEEEeCCCCcCCCCccc-CCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHH-HHHHHH
Confidence 457899999999999853221 1223357899999999999999999999999987 56 688899
Q ss_pred HcCCC--CCccc--------------ccccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCch-hhh
Q 032013 85 KLGIH--SMFVP--------------MVRLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDL-YVY 140 (149)
Q Consensus 85 ~~gl~--~~f~~--------------~~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~-~~~ 140 (149)
.+|+. .+|.. ....||+|.....+. .++++++|+++.|+.++|.+|++||+++ +.+
T Consensus 107 ~~gl~~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v 181 (218)
T 2o2x_A 107 EEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 181 (218)
T ss_dssp HTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred HcCCceeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEE
Confidence 99964 33322 134578885544443 5678899999999999999999999998 654
No 37
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=99.77 E-value=2.2e-19 Score=136.14 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=76.8
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc-ccCCChhHHHHHHhhCCCcceEEEeehHh
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV-RLSCCIMCIIFFLFFFSISAFILFVDLFC 125 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~-~~~p~p~~~i~~~~~~~~~~~l~~eDs~~ 125 (149)
..++||+.++|++|+++| +++|+||++... +...++.+|+.++|+... ...++|...-.+..+++|++|++++||++
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~-~~~~l~~~gl~~~f~~~~~~~~~K~~~~~~~~~~~~~~~~~~vgDs~~ 172 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVF-QPRKIARSGLWDEVEGRVLIYIHKELMLDQVMECYPARHYVMVDDKLR 172 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSH-HHHHHHHTTHHHHTTTCEEEESSGGGCHHHHHHHSCCSEEEEECSCHH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHH-HHHHHHHcCcHHhcCeeEEecCChHHHHHHHHhcCCCceEEEEcCccc
Confidence 578999999999999999 999999999988 799999999998887653 23444522222234789999999999999
Q ss_pred ---HHHHHHHhCCchhhhh
Q 032013 126 ---FMYAAAYVGCDLYVYK 141 (149)
Q Consensus 126 ---gi~aa~~ag~~~~~~~ 141 (149)
++.+|++|||+++.+.
T Consensus 173 d~~di~~A~~aG~~~i~v~ 191 (231)
T 2p11_A 173 ILAAMKKAWGARLTTVFPR 191 (231)
T ss_dssp HHHHHHHHHGGGEEEEEEC
T ss_pred hhhhhHHHHHcCCeEEEeC
Confidence 9999999999988653
No 38
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=99.77 E-value=7.2e-19 Score=129.87 Aligned_cols=92 Identities=17% Similarity=0.145 Sum_probs=76.8
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHHhhCCCcceEEEe
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFLFFFSISAFILFV 121 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~~~~~~~~~l~~e 121 (149)
.++||+.+ |+.|+++ ++++++||++... ++..++.+|+..+|+.+. ..||+|.+...+...+++++|++++
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~vG 150 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINE-VKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIGAKEAFLVS 150 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHH-HHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCSCCEEEE
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHH-HHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcCCCcEEEEe
Confidence 67899999 9999999 9999999999887 689999999998887642 3477775555444444499999999
Q ss_pred ehHhHHHHHHHhCCchhhhhh
Q 032013 122 DLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 122 Ds~~gi~aa~~ag~~~~~~~~ 142 (149)
|+++++.+|++||+.++.+.+
T Consensus 151 D~~~Di~~a~~aG~~~~~~~~ 171 (201)
T 2w43_A 151 SNAFDVIGAKNAGMRSIFVNR 171 (201)
T ss_dssp SCHHHHHHHHHTTCEEEEECS
T ss_pred CCHHHhHHHHHCCCEEEEECC
Confidence 999999999999999887543
No 39
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=8.1e-19 Score=130.19 Aligned_cols=93 Identities=19% Similarity=0.188 Sum_probs=80.7
Q ss_pred CccCccHHHHHHHHHHCC-ceEEEEeCCCchHHHHHHHHHcCCCCCccccc-ccCCChhHHHHHH--hhCCCcceEEEee
Q 032013 47 PYLYPHAKGILEALKEKG-IHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV-RLSCCIMCIIFFL--FFFSISAFILFVD 122 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~G-i~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~-~~~p~p~~~i~~~--~~~~~~~~l~~eD 122 (149)
..++|++.++|+.|+++| ++++++||++... +...++.+++..+|+.+. ..+|+|.+...+. .+++|++|++|.|
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~-~~~~l~~~~~~~~f~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD 182 (234)
T 3ddh_A 104 IELLPGVKETLKTLKETGKYKLVVATKGDLLD-QENKLERSGLSPYFDHIEVMSDKTEKEYLRLLSILQIAPSELLMVGN 182 (234)
T ss_dssp CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHH-HHHHHHHHTCGGGCSEEEEESCCSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred CCcCccHHHHHHHHHhCCCeEEEEEeCCchHH-HHHHHHHhCcHhhhheeeecCCCCHHHHHHHHHHhCCCcceEEEECC
Confidence 468999999999999999 9999999998887 689999999999998764 4578885554444 6788899999999
Q ss_pred hH-hHHHHHHHhCCchhhh
Q 032013 123 LF-CFMYAAAYVGCDLYVY 140 (149)
Q Consensus 123 s~-~gi~aa~~ag~~~~~~ 140 (149)
++ |++.+|++||+.++.+
T Consensus 183 ~~~~Di~~a~~aG~~~v~v 201 (234)
T 3ddh_A 183 SFKSDIQPVLSLGGYGVHI 201 (234)
T ss_dssp CCCCCCHHHHHHTCEEEEC
T ss_pred CcHHHhHHHHHCCCeEEEe
Confidence 97 9999999999999876
No 40
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.77 E-value=1.3e-18 Score=129.81 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=88.4
Q ss_pred CccEEEEecCCccccccccccccCCCCccCc-cHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYP-HAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLS 99 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~p-g~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~ 99 (149)
.+++|+||+||||+|+...+....+....+. .-..+|++|+++|++++|+||++... ++..++.+|+..+|+.. +
T Consensus 18 ~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~~~~lgl~~~f~~~---~ 93 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIASGVTTAIISGRKTAI-VERRAKSLGIEHLFQGR---E 93 (189)
T ss_dssp TCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHHHHTCSEEECSC---S
T ss_pred hCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHHCCCEEEEEECcChHH-HHHHHHHcCCHHHhcCc---C
Confidence 4899999999999997443322221111110 01138999999999999999999998 79999999999988875 6
Q ss_pred CChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 100 CCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 100 p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
++|.....+. .++++++|++++|+.|++.++++||+.+.+
T Consensus 94 ~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~ 135 (189)
T 3mn1_A 94 DKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAV 135 (189)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEe
Confidence 6664444443 567789999999999999999999988765
No 41
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=99.76 E-value=9.8e-19 Score=132.03 Aligned_cols=94 Identities=23% Similarity=0.194 Sum_probs=79.0
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCC-Ccce
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFS-ISAF 117 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~-~~~~ 117 (149)
..++|++.++|++|+++|++++++||++... ++..++.+|+..+|+.+. ..||+|.+...+. .+++ +++|
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~ 187 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVF-AETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKV 187 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHH-HHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcE
Confidence 5689999999999999999999999998888 799999999998888652 2356664433333 6688 9999
Q ss_pred EEEeehHhHHHHHHHhCCchhhhh
Q 032013 118 ILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 118 l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
++|.|+++++.+|++||++++.+.
T Consensus 188 i~vGD~~~Di~~a~~aG~~~i~v~ 211 (240)
T 3sd7_A 188 IMVGDRKYDIIGAKKIGIDSIGVL 211 (240)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEES
T ss_pred EEECCCHHHHHHHHHCCCCEEEEe
Confidence 999999999999999999888654
No 42
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=99.76 E-value=5.7e-19 Score=133.81 Aligned_cols=92 Identities=17% Similarity=0.175 Sum_probs=77.9
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceEE
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFIL 119 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l~ 119 (149)
.++|++.++|++|+++|++++++||++... +...++.+|+..+|+.+. ..||+|.....+. .+++|++|++
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~ 172 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVK-QWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALM 172 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHH-HHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchh-HHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 478999999999999999999999998887 689999999999887652 3477774444433 5688899999
Q ss_pred EeehH-hHHHHHHHhCCchhhh
Q 032013 120 FVDLF-CFMYAAAYVGCDLYVY 140 (149)
Q Consensus 120 ~eDs~-~gi~aa~~ag~~~~~~ 140 (149)
|+|++ |++.+|++||+.++.+
T Consensus 173 iGD~~~~Di~~a~~aG~~~~~v 194 (241)
T 2hoq_A 173 VGDRLYSDIYGAKRVGMKTVWF 194 (241)
T ss_dssp EESCTTTTHHHHHHTTCEEEEE
T ss_pred ECCCchHhHHHHHHCCCEEEEE
Confidence 99998 9999999999998875
No 43
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=99.76 E-value=5.8e-19 Score=134.86 Aligned_cols=95 Identities=17% Similarity=0.029 Sum_probs=80.1
Q ss_pred CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccc-c------c-ccCCChhHHHHHH--hhCCCc
Q 032013 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVP-M------V-RLSCCIMCIIFFL--FFFSIS 115 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~-~------~-~~~p~p~~~i~~~--~~~~~~ 115 (149)
...++|++.++|++|+++|++++++||++... ++..++.+|+..+|+. + . ..||+|.+...+. .+++++
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 186 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGR-LHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPE 186 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHH-HHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGG
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHH
Confidence 46789999999999999999999999999888 7999999999888876 3 2 4577775444443 567789
Q ss_pred ceEEEeehHhHHHHHHHhCCchhhhh
Q 032013 116 AFILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 116 ~~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+|++|.|+++++.+|++||+.++.+.
T Consensus 187 ~~i~iGD~~~Di~~a~~aG~~~i~v~ 212 (259)
T 4eek_A 187 RCVVIEDSVTGGAAGLAAGATLWGLL 212 (259)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEEEC
T ss_pred HEEEEcCCHHHHHHHHHCCCEEEEEc
Confidence 99999999999999999999987664
No 44
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=99.76 E-value=3.6e-18 Score=132.51 Aligned_cols=91 Identities=12% Similarity=0.008 Sum_probs=77.0
Q ss_pred CccCccHHHHHHHHHHCCc--eEEEEeCCCchHHHHHHHHHcCCCCCccccc----------ccCCChhHHHHHH--hhC
Q 032013 47 PYLYPHAKGILEALKEKGI--HVAVASRSPAPDIAKTFLHKLGIHSMFVPMV----------RLSCCIMCIIFFL--FFF 112 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi--~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~----------~~~p~p~~~i~~~--~~~ 112 (149)
..++||+.++|+.|+++|+ +++++||+.... +...++.+|+..+|+.+. ..||+|.+...+. .++
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~-~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi 219 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNH-AIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGL 219 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHH-HHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTC
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHH-HHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCC
Confidence 5689999999999999999 999999999888 799999999999988753 1266664444443 678
Q ss_pred CC-cceEEEeehHhHHHHHHHhCCchh
Q 032013 113 SI-SAFILFVDLFCFMYAAAYVGCDLY 138 (149)
Q Consensus 113 ~~-~~~l~~eDs~~gi~aa~~ag~~~~ 138 (149)
++ ++|++|.|+++++.+|++||+.+.
T Consensus 220 ~~~~~~i~vGD~~~Di~~a~~aG~~~~ 246 (282)
T 3nuq_A 220 ARYENAYFIDDSGKNIETGIKLGMKTC 246 (282)
T ss_dssp CCGGGEEEEESCHHHHHHHHHHTCSEE
T ss_pred CCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 88 999999999999999999999443
No 45
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=99.76 E-value=9.4e-19 Score=130.78 Aligned_cols=93 Identities=14% Similarity=0.048 Sum_probs=77.4
Q ss_pred CccCccHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHHHcCCCCCccccc-----ccCCChhHHHHHH----hh--CCC
Q 032013 47 PYLYPHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV-----RLSCCIMCIIFFL----FF--FSI 114 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~-Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~-----~~~p~p~~~i~~~----~~--~~~ 114 (149)
..++||+.++|++|+++ |++++|+||++... +...++.+|+..+|+... ..+++|.+.+|.. .+ ++|
T Consensus 92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~ 170 (234)
T 2hcf_A 92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEAS-GRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSP 170 (234)
T ss_dssp EEECTTHHHHHHHHHTCTTEEEEEECSSCHHH-HHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCG
T ss_pred CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHH-HHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999 99999999999887 789999999999987532 2244455566554 45 788
Q ss_pred cceEEEeehHhHHHHHHHhCCchhhh
Q 032013 115 SAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 115 ~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
++|++|+||+|++.+|++||++++.+
T Consensus 171 ~~~i~iGD~~~Di~~a~~aG~~~i~v 196 (234)
T 2hcf_A 171 SQIVIIGDTEHDIRCARELDARSIAV 196 (234)
T ss_dssp GGEEEEESSHHHHHHHHTTTCEEEEE
T ss_pred ccEEEECCCHHHHHHHHHCCCcEEEE
Confidence 99999999999999999999997764
No 46
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=99.76 E-value=2.1e-19 Score=136.73 Aligned_cols=95 Identities=18% Similarity=0.127 Sum_probs=74.5
Q ss_pred CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHH-cCCCCCcccc--------cccCCChhHHHHHH--hhCCC
Q 032013 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK-LGIHSMFVPM--------VRLSCCIMCIIFFL--FFFSI 114 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~-~gl~~~f~~~--------~~~~p~p~~~i~~~--~~~~~ 114 (149)
...+.|++.++|++|+++|++++++||++... +...+.. .++..+|+.+ ...||+|.++..+. .++++
T Consensus 110 ~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~-~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 188 (250)
T 3l5k_A 110 TAALMPGAEKLIIHLRKHGIPFALATSSRSAS-FDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPP 188 (250)
T ss_dssp GCCBCTTHHHHHHHHHHTTCCEEEECSCCHHH-HHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHH-HHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence 35689999999999999999999999998776 5665544 4676666643 23477774444444 55666
Q ss_pred --cceEEEeehHhHHHHHHHhCCchhhhh
Q 032013 115 --SAFILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 115 --~~~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
++|++|+|+.+++.+|++||+.++.+.
T Consensus 189 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 217 (250)
T 3l5k_A 189 AMEKCLVFEDAPNGVEAALAAGMQVVMVP 217 (250)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CcceEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence 999999999999999999999988754
No 47
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=99.75 E-value=1.3e-18 Score=134.99 Aligned_cols=93 Identities=10% Similarity=0.048 Sum_probs=76.3
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++||+.++|++|++ +++++|+||++... +...++.+|+..+|+.+. ..||+|.++..+. .+++|++|+
T Consensus 120 ~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 197 (260)
T 2gfh_A 120 MILADDVKAMLTELRK-EVRLLLLTNGDRQT-QREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 197 (260)
T ss_dssp CCCCHHHHHHHHHHHT-TSEEEEEECSCHHH-HHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCcCHHHHHHHHHc-CCcEEEEECcChHH-HHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 3678999999999998 59999999999888 689999999999998752 3477774433333 568889999
Q ss_pred EEeeh-HhHHHHHHHhCC-chhhhh
Q 032013 119 LFVDL-FCFMYAAAYVGC-DLYVYK 141 (149)
Q Consensus 119 ~~eDs-~~gi~aa~~ag~-~~~~~~ 141 (149)
+++|| .++|++|++||| .++.+.
T Consensus 198 ~vGDs~~~Di~~A~~aG~~~~i~v~ 222 (260)
T 2gfh_A 198 MVGDTLETDIQGGLNAGLKATVWIN 222 (260)
T ss_dssp EEESCTTTHHHHHHHTTCSEEEEEC
T ss_pred EECCCchhhHHHHHHCCCceEEEEc
Confidence 99995 999999999999 676543
No 48
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=99.75 E-value=2.5e-18 Score=128.53 Aligned_cols=94 Identities=12% Similarity=0.136 Sum_probs=79.3
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hh-CCCcce
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FF-FSISAF 117 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~-~~~~~~ 117 (149)
..++|++.++|+.|+++ ++++++||++... +...++.+|+..+|+.+. ..||+|.+...+. .+ ++|++|
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~ 179 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHT-QYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHT 179 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHH-HHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGE
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHH-HHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHe
Confidence 56899999999999999 9999999999888 689999999999887652 4577775554444 55 678999
Q ss_pred EEEeehH-hHHHHHHHhCCchhhhhh
Q 032013 118 ILFVDLF-CFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 118 l~~eDs~-~gi~aa~~ag~~~~~~~~ 142 (149)
++|.|++ +++.+|++||++++.+.+
T Consensus 180 i~vGD~~~~Di~~a~~aG~~~i~~~~ 205 (238)
T 3ed5_A 180 LIIGDSLTADIKGGQLAGLDTCWMNP 205 (238)
T ss_dssp EEEESCTTTTHHHHHHTTCEEEEECT
T ss_pred EEECCCcHHHHHHHHHCCCEEEEECC
Confidence 9999998 999999999999887643
No 49
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=99.75 E-value=2.8e-18 Score=132.48 Aligned_cols=94 Identities=16% Similarity=0.097 Sum_probs=78.2
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++||+.++|++|+++|++++|+||++. . +...++.+|+..+|+.+. ..||+|..+..+. .+++|++|+
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~ 182 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-R-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAA 182 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCT-T-HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcH-H-HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 46899999999999999999999999876 4 588999999999988652 3467774433333 678889999
Q ss_pred EEeehH-hHHHHHHHhCCchhhhhh
Q 032013 119 LFVDLF-CFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 119 ~~eDs~-~gi~aa~~ag~~~~~~~~ 142 (149)
+|.|++ ++|.+|++|||.++.+.+
T Consensus 183 ~vGD~~~~Di~~a~~aG~~~i~~~~ 207 (263)
T 3k1z_A 183 HVGDNYLCDYQGPRAVGMHSFLVVG 207 (263)
T ss_dssp EEESCHHHHTHHHHTTTCEEEEECC
T ss_pred EECCCcHHHHHHHHHCCCEEEEEcC
Confidence 999997 999999999999987654
No 50
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=99.75 E-value=3.4e-18 Score=126.19 Aligned_cols=114 Identities=16% Similarity=0.024 Sum_probs=86.3
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHH--HHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAK--GILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVR 97 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~--e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~ 97 (149)
.++++++||+||||+|....+....+....+ +.. .+|++|+++|++++|+||++... ++..++.+|+. +|..
T Consensus 10 ~~~k~vifD~DGTL~d~~~~~~~~~~~~~~~-~~~~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~~~~lgi~-~~~~--- 83 (176)
T 3mmz_A 10 EDIDAVVLDFDGTQTDDRVLIDSDGREFVSV-HRGDGLGIAALRKSGLTMLILSTEQNPV-VAARARKLKIP-VLHG--- 83 (176)
T ss_dssp GGCSEEEECCTTTTSCSCCEECTTCCEEEEE-EHHHHHHHHHHHHTTCEEEEEESSCCHH-HHHHHHHHTCC-EEES---
T ss_pred hcCCEEEEeCCCCcCcCCEeecCCccHhHhc-ccccHHHHHHHHHCCCeEEEEECcChHH-HHHHHHHcCCe-eEeC---
Confidence 3479999999999999533322211111111 111 26999999999999999999998 79999999998 5544
Q ss_pred cCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 98 LSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 98 ~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.+|+|.....+. .++++++|+++.|+.|++.++++||+.+.+
T Consensus 84 ~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~ 127 (176)
T 3mmz_A 84 IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV 127 (176)
T ss_dssp CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC
Confidence 377776555554 567789999999999999999999988766
No 51
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=99.75 E-value=3.3e-18 Score=127.40 Aligned_cols=93 Identities=16% Similarity=0.119 Sum_probs=77.9
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCC---chHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcce
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSP---APDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAF 117 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~---~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~ 117 (149)
++|++.++|+.|+++|++++++||+. ... +...++.+++..+|+.+. ..||+|.+...+. .+++|++|
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSY-TRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHH-HHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGE
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhH-HHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccce
Confidence 47899999999999999999999998 777 688999999998887652 3477775444443 56778999
Q ss_pred EEEeehH-hHHHHHHHhCCchhhhhh
Q 032013 118 ILFVDLF-CFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 118 l~~eDs~-~gi~aa~~ag~~~~~~~~ 142 (149)
++|+|++ |++.+|++||+.++.+.+
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~ 204 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQ 204 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECT
T ss_pred EEECCChHHHHHHHHHCCCEEEEECC
Confidence 9999999 999999999999887543
No 52
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=99.75 E-value=2.2e-18 Score=131.49 Aligned_cols=115 Identities=17% Similarity=0.043 Sum_probs=89.8
Q ss_pred CCccEEEEecCCccccccccccccCCCCc---cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPY---LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV 96 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~---~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~ 96 (149)
.++++|+||+||||+|+...+....+... +.++ .+|++|+++|++++|+||++... ++.+++.+|+..+|...
T Consensus 47 ~~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~--~~L~~L~~~G~~l~I~T~~~~~~-~~~~l~~lgi~~~f~~~- 122 (211)
T 3ij5_A 47 ANIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDG--YGIRCLITSDIDVAIITGRRAKL-LEDRANTLGITHLYQGQ- 122 (211)
T ss_dssp TTCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHH--HHHHHHHHTTCEEEEECSSCCHH-HHHHHHHHTCCEEECSC-
T ss_pred hCCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchH--HHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCchhhccc-
Confidence 34799999999999997543322221111 1122 27999999999999999999998 79999999999888765
Q ss_pred ccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 97 RLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 97 ~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
+|+|.....+. .++++++|++++|+.|++.++++||+.+.+.
T Consensus 123 --k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~ 166 (211)
T 3ij5_A 123 --SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA 166 (211)
T ss_dssp --SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT
T ss_pred --CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC
Confidence 77775554444 5677899999999999999999999887664
No 53
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=99.75 E-value=1.3e-18 Score=131.11 Aligned_cols=93 Identities=14% Similarity=-0.042 Sum_probs=74.8
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHH------HHcCCCCCcccc------cccCCChhHHHHHH--hhCC
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFL------HKLGIHSMFVPM------VRLSCCIMCIIFFL--FFFS 113 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l------~~~gl~~~f~~~------~~~~p~p~~~i~~~--~~~~ 113 (149)
.+.||+.++|+.|+++ ++++|+||++... +...+ +.+|+..+|+.+ ...||+|..+..+. .+++
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~-~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~ 189 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIH-WKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGID 189 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHH-HHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHH-HHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence 4679999999999999 9999999999887 56444 667887778765 23477774433333 6788
Q ss_pred CcceEEEeehHhHHHHHHHhCCchhhhhh
Q 032013 114 ISAFILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 114 ~~~~l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
|++|++|+|++++|.+|++||++++.+.+
T Consensus 190 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 190 PKETFFIDDSEINCKVAQELGISTYTPKA 218 (229)
T ss_dssp GGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred HHHeEEECCCHHHHHHHHHcCCEEEEECC
Confidence 89999999999999999999999987754
No 54
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=99.75 E-value=1.1e-18 Score=129.16 Aligned_cols=94 Identities=10% Similarity=0.073 Sum_probs=79.1
Q ss_pred CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcce
Q 032013 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAF 117 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~ 117 (149)
...+.|++.++|+.|+++ ++++++||++... ++..++.+|+..+|+.+. ..||+|.+...+. .++++++|
T Consensus 81 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 158 (209)
T 2hdo_A 81 QIELYPGITSLFEQLPSE-LRLGIVTSQRRNE-LESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNA 158 (209)
T ss_dssp GCEECTTHHHHHHHSCTT-SEEEEECSSCHHH-HHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred cCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHH-HHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccE
Confidence 357889999999999999 9999999999887 689999999988887652 3477785554444 56778999
Q ss_pred EEEeehHhHHHHHHHhCCchhhhh
Q 032013 118 ILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 118 l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
++++|+.+++.+|++||+.++.+.
T Consensus 159 i~vGD~~~Di~~a~~aG~~~~~~~ 182 (209)
T 2hdo_A 159 LFIGDSVSDEQTAQAANVDFGLAV 182 (209)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEEG
T ss_pred EEECCChhhHHHHHHcCCeEEEEc
Confidence 999999999999999999988654
No 55
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=99.75 E-value=5.4e-18 Score=123.33 Aligned_cols=93 Identities=17% Similarity=0.204 Sum_probs=76.0
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHHhhCCCcceEEEe
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFLFFFSISAFILFV 121 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~~~~~~~~~l~~e 121 (149)
.+.|++.++|+.|+++|++++++||++. . +...++.+++..+|+... ..+|+|.....+...++.++|++|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~-~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~iG 159 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-Q-VLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISSGLVIG 159 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-H-HHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCSSEEEEE
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-H-HHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCCeEEEEc
Confidence 3889999999999999999999999864 5 688999999988887542 3477775555555444444999999
Q ss_pred ehHhHHHHHHHhCCchhhhhh
Q 032013 122 DLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 122 Ds~~gi~aa~~ag~~~~~~~~ 142 (149)
|++|++.+|++||+.++.+.+
T Consensus 160 D~~~Di~~a~~aG~~~~~~~~ 180 (190)
T 2fi1_A 160 DRPIDIEAGQAAGLDTHLFTS 180 (190)
T ss_dssp SSHHHHHHHHHTTCEEEECSC
T ss_pred CCHHHHHHHHHcCCeEEEECC
Confidence 999999999999999887643
No 56
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=99.75 E-value=1.9e-19 Score=136.87 Aligned_cols=117 Identities=18% Similarity=0.043 Sum_probs=82.1
Q ss_pred CccEEEEecCCcccccccccc-------ccC------------------CCCccCccHHHHHHHHHHCCceEEEEeCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECC-------YED------------------EIPYLYPHAKGILEALKEKGIHVAVASRSPA 75 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~-------~~~------------------~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~ 75 (149)
++++|+||+||||+|+...+. +.. ....+.|++.++|++|+++|++++|+||++.
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~ 115 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP 115 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 489999999999999532110 000 0113567999999999999999999999986
Q ss_pred hHHHHHHHHHcCCCCCccc---------ccccCCChhHHHHHHhhCCCcceEEEeehHhHHHHHHHhCCchhhhhh
Q 032013 76 PDIAKTFLHKLGIHSMFVP---------MVRLSCCIMCIIFFLFFFSISAFILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 76 ~~i~~~~l~~~gl~~~f~~---------~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
.. +...++. +.++|+. ....||+|.....+...++. |++++||+++|++|++|||+++.+.+
T Consensus 116 ~~-~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~--~l~VGDs~~Di~aA~~aG~~~i~v~~ 186 (211)
T 2b82_A 116 TK-TETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI--RIFYGDSDNDITAARDVGARGIRILR 186 (211)
T ss_dssp CS-SCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE--EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred HH-HHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC--EEEEECCHHHHHHHHHCCCeEEEEec
Confidence 54 3444443 2222222 22457777554444455665 99999999999999999999987643
No 57
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=99.75 E-value=1e-18 Score=129.35 Aligned_cols=92 Identities=9% Similarity=0.017 Sum_probs=76.6
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHH------cCCCCCccccc------ccCCChhHHHHHH--hhCC
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK------LGIHSMFVPMV------RLSCCIMCIIFFL--FFFS 113 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~------~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~ 113 (149)
.++|++.++|+.|++ |++++++||++... +...++. +|+..+|+.+. ..||+|.....+. .+++
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~-~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 166 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYV-LDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMK 166 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHH-HHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHH-HHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCC
Confidence 578999999999999 99999999998887 6888888 79888887652 3477774443333 5688
Q ss_pred CcceEEEeehHhHHHHHHHhCCchhhhh
Q 032013 114 ISAFILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 114 ~~~~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
|++|++|+|+++++.+|++||+.++.+.
T Consensus 167 ~~~~~~igD~~~Di~~a~~aG~~~~~~~ 194 (211)
T 2i6x_A 167 PEETLFIDDGPANVATAERLGFHTYCPD 194 (211)
T ss_dssp GGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred hHHeEEeCCCHHHHHHHHHcCCEEEEEC
Confidence 8999999999999999999999998764
No 58
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=99.75 E-value=4.9e-18 Score=125.62 Aligned_cols=92 Identities=18% Similarity=0.115 Sum_probs=76.2
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..+.|++.++|+.|+++|++++++||+ .. +...++.+++..+|+... ..||+|.+...+. .+++|++|+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~-~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i 166 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KN-GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TT-HHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HH-HHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 457899999999999999999999998 44 578889999988887652 3477775555544 567789999
Q ss_pred EEeehHhHHHHHHHhCCchhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+|+|++|++.+|++||+.++.+.
T Consensus 167 ~iGD~~nDi~~a~~aG~~~~~~~ 189 (221)
T 2wf7_A 167 GLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEES
T ss_pred EEeCCHHHHHHHHHCCCEEEEEC
Confidence 99999999999999999988753
No 59
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.74 E-value=1e-18 Score=143.94 Aligned_cols=95 Identities=15% Similarity=0.106 Sum_probs=72.4
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCC--CchHHHHHHHHHc--CCCCCccccc------ccCCChhHHHHHH--hhCCC
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRS--PAPDIAKTFLHKL--GIHSMFVPMV------RLSCCIMCIIFFL--FFFSI 114 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~--~~~~i~~~~l~~~--gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~ 114 (149)
..++||+.++|++|+++|++++|+||+ .... ....+... ++..+|+.+. ..||+|..+..+. .+++|
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~-~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p 177 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRA-ERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP 177 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCST-THHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccc-hhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCCh
Confidence 368899999999999999999999998 2222 12333333 6667787652 3477774443333 67888
Q ss_pred cceEEEeehHhHHHHHHHhCCchhhhhh
Q 032013 115 SAFILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 115 ~~~l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
++|++++||.++|.+|++|||+++.+.+
T Consensus 178 ~~~~~v~D~~~di~~a~~aG~~~~~~~~ 205 (555)
T 3i28_A 178 SEVVFLDDIGANLKPARDLGMVTILVQD 205 (555)
T ss_dssp GGEEEEESCHHHHHHHHHHTCEEEECSS
T ss_pred hHEEEECCcHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999998754
No 60
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=99.74 E-value=9.6e-18 Score=128.19 Aligned_cols=94 Identities=14% Similarity=-0.041 Sum_probs=78.6
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCC-cccc------cccCCChhHHHHHH--hhCCC-cc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM-FVPM------VRLSCCIMCIIFFL--FFFSI-SA 116 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~-f~~~------~~~~p~p~~~i~~~--~~~~~-~~ 116 (149)
..++||+.++|+.|+++|++++++||++... +...++.+++..+ |+.+ ...||+|.+...+. .++++ ++
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 188 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGM-MAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNG 188 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGG
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHH-HHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCcc
Confidence 4688999999999999999999999999887 6889999888777 6654 23477775544444 67888 99
Q ss_pred eEEEeehHhHHHHHHHhCCchhhhh
Q 032013 117 FILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 117 ~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
|++|.|++++|.+|++||++++.+.
T Consensus 189 ~i~vGD~~~Di~~a~~aG~~~v~v~ 213 (277)
T 3iru_A 189 CIKVDDTLPGIEEGLRAGMWTVGVS 213 (277)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred EEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 9999999999999999999987653
No 61
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=99.74 E-value=2.6e-18 Score=141.98 Aligned_cols=122 Identities=16% Similarity=0.123 Sum_probs=98.0
Q ss_pred cCCCccEEEEecCCccccccccccc-------cCCC-CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHH----
Q 032013 18 FENLPRLVVFDLDYTLWPFYCECCY-------EDEI-PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK---- 85 (149)
Q Consensus 18 ~~~~~k~vifDlDGTLld~~~~~~~-------~~~~-~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~---- 85 (149)
..+.+|+++||+|||||++...++. ++.. ..++||+.++|+.|+++|++++|+||++... ++..+++
T Consensus 218 ~~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~-v~~~l~~~~~~ 296 (387)
T 3nvb_A 218 QGKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNRGIIIAVCSKNNEGK-AKEPFERNPEM 296 (387)
T ss_dssp TTCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHTTCEEEEEEESCHHH-HHHHHHHCTTC
T ss_pred HhCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHhhcccc
Confidence 4567999999999999996432110 1111 2578999999999999999999999999988 7999988
Q ss_pred -cCCCCCcccccccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHh--CCchhhh
Q 032013 86 -LGIHSMFVPMVRLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYV--GCDLYVY 140 (149)
Q Consensus 86 -~gl~~~f~~~~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~a--g~~~~~~ 140 (149)
+++.++|......||+|.+...+. .++++++|++++|+++++.++++| |+.++-+
T Consensus 297 ~l~l~~~~~v~~~~KPKp~~l~~al~~Lgl~pee~v~VGDs~~Di~aaraalpgV~vi~~ 356 (387)
T 3nvb_A 297 VLKLDDIAVFVANWENKADNIRTIQRTLNIGFDSMVFLDDNPFERNMVREHVPGVTVPEL 356 (387)
T ss_dssp SSCGGGCSEEEEESSCHHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHHSTTCBCCCC
T ss_pred ccCccCccEEEeCCCCcHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHhcCCCeEEEEc
Confidence 677777776667788886555554 678889999999999999999999 8877643
No 62
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=99.74 E-value=6.5e-18 Score=127.34 Aligned_cols=116 Identities=13% Similarity=0.020 Sum_probs=90.3
Q ss_pred CccEEEEecCCccccccccccccCCC-CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEI-PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLS 99 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~-~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~ 99 (149)
.+++|+||+||||+++...+....+. ....+.....|++|+++|++++|+||++... ++.+++.+|+..+|... +
T Consensus 24 ~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~-~~~~l~~lgi~~~~~~~---k 99 (195)
T 3n07_A 24 QIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQI-VENRMKALGISLIYQGQ---D 99 (195)
T ss_dssp TCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHHHTTCCEEECSC---S
T ss_pred CCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHH-HHHHHHHcCCcEEeeCC---C
Confidence 47999999999999954433222111 1122333455999999999999999999998 79999999999887653 7
Q ss_pred CChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 100 CCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 100 p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
|+|.+...+. .++++++|++|.|+.|++.++++||+.+.+-
T Consensus 100 ~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~ 142 (195)
T 3n07_A 100 DKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA 142 (195)
T ss_dssp SHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred CcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC
Confidence 8886655554 5678899999999999999999999887653
No 63
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=99.74 E-value=2.8e-18 Score=127.90 Aligned_cols=92 Identities=13% Similarity=0.010 Sum_probs=73.2
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHH---H--hhCCCc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFF---L--FFFSIS 115 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~---~--~~~~~~ 115 (149)
..++|++.++|+.|++ |++++++||++... +...++. +..+|+.+. ..||+|..+..+ . .+++|+
T Consensus 98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~-~~~~l~~--l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~ 173 (240)
T 3smv_A 98 WPAFPDTVEALQYLKK-HYKLVILSNIDRNE-FKLSNAK--LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKK 173 (240)
T ss_dssp CCBCTTHHHHHHHHHH-HSEEEEEESSCHHH-HHHHHTT--TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGG
T ss_pred CCCCCcHHHHHHHHHh-CCeEEEEeCCChhH-HHHHHHh--cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCch
Confidence 3688999999999999 89999999999887 5777776 556777652 347777433333 2 468889
Q ss_pred ceEEEeehH-hHHHHHHHhCCchhhhhh
Q 032013 116 AFILFVDLF-CFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 116 ~~l~~eDs~-~gi~aa~~ag~~~~~~~~ 142 (149)
+|++|.|++ +++.+|++||+.++.+.+
T Consensus 174 ~~~~vGD~~~~Di~~a~~aG~~~~~~~~ 201 (240)
T 3smv_A 174 DILHTAESLYHDHIPANDAGLVSAWIYR 201 (240)
T ss_dssp GEEEEESCTTTTHHHHHHHTCEEEEECT
T ss_pred hEEEECCCchhhhHHHHHcCCeEEEEcC
Confidence 999999996 999999999999987653
No 64
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=99.74 E-value=3.7e-18 Score=127.71 Aligned_cols=115 Identities=15% Similarity=0.028 Sum_probs=89.3
Q ss_pred CCccEEEEecCCccccccccccccCCC---CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEI---PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV 96 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~---~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~ 96 (149)
..+++++||+||||+++...+....+. ..+.++ ..|++|+++|++++|+||++... +...++.+|+..+|+..
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~--~~l~~L~~~g~~~~ivTn~~~~~-~~~~l~~lgl~~~~~~~- 92 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDG--MGLKLLMAAGIQVAIITTAQNAV-VDHRMEQLGITHYYKGQ- 92 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHH--HHHHHHHHTTCEEEEECSCCSHH-HHHHHHHHTCCEEECSC-
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccCh--HHHHHHHHCCCeEEEEeCcChHH-HHHHHHHcCCccceeCC-
Confidence 348999999999999954333221110 111111 24999999999999999999998 79999999998887754
Q ss_pred ccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 97 RLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 97 ~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
+|+|.....+. .++++++|+++.|+.+++.++++||+.+.+.
T Consensus 93 --kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 136 (191)
T 3n1u_A 93 --VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS 136 (191)
T ss_dssp --SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred --CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC
Confidence 88886655554 5678899999999999999999999987653
No 65
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.74 E-value=5.2e-18 Score=126.70 Aligned_cols=94 Identities=20% Similarity=0.184 Sum_probs=79.3
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++|++.++|++|+ +|++++++||++... +...++.+|+..+|+.+. ..||+|.+...+. .+++|++|+
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 183 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFREL-QSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESL 183 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHH-HHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHH-HHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 568999999999999 999999999998888 689999999998887652 3477775544444 567789999
Q ss_pred EEeehH-hHHHHHHHhCCchhhhhh
Q 032013 119 LFVDLF-CFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 119 ~~eDs~-~gi~aa~~ag~~~~~~~~ 142 (149)
+|.|++ +++.+|++||+.++.+.+
T Consensus 184 ~iGD~~~~Di~~a~~aG~~~~~~~~ 208 (240)
T 3qnm_A 184 MIGDSWEADITGAHGVGMHQAFYNV 208 (240)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECC
T ss_pred EECCCchHhHHHHHHcCCeEEEEcC
Confidence 999996 999999999999987654
No 66
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=99.73 E-value=7.4e-18 Score=125.87 Aligned_cols=93 Identities=22% Similarity=0.194 Sum_probs=79.0
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++|++.++|+.|+++ ++++++||++... +...++.+|+..+|+.+. ..||+|.....+. .+++|++|+
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~-~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQ-AMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHH-HHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHH-HHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEE
Confidence 46889999999999999 9999999999888 699999999999888752 3577775544443 668889999
Q ss_pred EEeehH-hHHHHHHHhCCchhhhh
Q 032013 119 LFVDLF-CFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~-~gi~aa~~ag~~~~~~~ 141 (149)
+|.|++ |++.+|++||++++.+.
T Consensus 177 ~vGD~~~~Di~~a~~aG~~~~~v~ 200 (234)
T 3u26_A 177 YVGDNPVKDCGGSKNLGMTSILLD 200 (234)
T ss_dssp EEESCTTTTHHHHHTTTCEEEEEC
T ss_pred EEcCCcHHHHHHHHHcCCEEEEEC
Confidence 999998 99999999999988754
No 67
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=99.72 E-value=1.3e-18 Score=128.15 Aligned_cols=95 Identities=20% Similarity=0.095 Sum_probs=74.4
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHH-cCCCCCcccc------cccCCChhHHHHHH--hhCCCcce
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK-LGIHSMFVPM------VRLSCCIMCIIFFL--FFFSISAF 117 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~-~gl~~~f~~~------~~~~p~p~~~i~~~--~~~~~~~~ 117 (149)
..+.|++.++|++|+++|++++++||++... +...++. +|+..+|+.+ ...||+|.....+. .++++++|
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 168 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLH-TTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT 168 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCT-TSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHH-HHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 4678999999999999999999999998776 4555555 5666666654 23477774433333 66888999
Q ss_pred EEEeehHhHHHHHHHhCCchhhhhh
Q 032013 118 ILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 118 l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
+++.|+++++.+|++||++++.+.+
T Consensus 169 ~~vgD~~~Di~~a~~aG~~~~~~~~ 193 (206)
T 2b0c_A 169 VFFDDNADNIEGANQLGITSILVKD 193 (206)
T ss_dssp EEEESCHHHHHHHHTTTCEEEECCS
T ss_pred EEeCCCHHHHHHHHHcCCeEEEecC
Confidence 9999999999999999999987643
No 68
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=99.72 E-value=1e-18 Score=131.09 Aligned_cols=92 Identities=18% Similarity=0.154 Sum_probs=72.5
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC--Ccccc------------cc------cCCChhHHH
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS--MFVPM------------VR------LSCCIMCII 106 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~--~f~~~------------~~------~~p~p~~~i 106 (149)
.+++||+.++|++|+++|++++|+||++... ++..++.+|+.. +|+.. .. .+|+|.+..
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 163 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSI-VEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 163 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHH-HHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHH
Confidence 5689999999999999999999999999888 799999999973 55432 11 124553333
Q ss_pred HHHhhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 107 FFLFFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 107 ~~~~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
.+...+++++|++++||++++.+|++||+ ++.+
T Consensus 164 ~~~~~~~~~~~~~vGDs~~Di~~a~~ag~-~i~~ 196 (225)
T 1nnl_A 164 LLKEKFHFKKIIMIGDGATDMEACPPADA-FIGF 196 (225)
T ss_dssp HHHHHHCCSCEEEEESSHHHHTTTTTSSE-EEEE
T ss_pred HHHHHcCCCcEEEEeCcHHhHHHHHhCCe-EEEe
Confidence 33344566899999999999999999999 6654
No 69
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=99.72 E-value=1.7e-17 Score=124.85 Aligned_cols=92 Identities=8% Similarity=-0.067 Sum_probs=72.3
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc-------ccC-------CChhHHHHHH----
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV-------RLS-------CCIMCIIFFL---- 109 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~-------~~~-------p~p~~~i~~~---- 109 (149)
.++||+.++|++|+++|++++|+||++... ++.+++.+|+..+|.... ..+ +.+.+..+..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFV-TAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 569999999999999999999999999888 799999999986654321 001 1122233322
Q ss_pred hh---CCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 110 FF---FSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 110 ~~---~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
.+ +++++|++++||.+++.++++||+.++|.
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred cCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 45 77899999999999999999999998764
No 70
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=99.72 E-value=1.7e-17 Score=122.63 Aligned_cols=93 Identities=17% Similarity=0.098 Sum_probs=78.8
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..+.|++.++|+.++++|++++++||++... +...++.+++..+|+... ..||+|.+...+. .++++++|+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i 171 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHM-LEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 171 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHH-HHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 4678999999999999999999999998887 688999999988877652 3477776555554 567889999
Q ss_pred EEeehHhHHHHHHHhCCchhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
+|.|++|++.+|++||+.++.+
T Consensus 172 ~iGD~~nDi~~a~~aG~~~~~~ 193 (226)
T 1te2_A 172 ALEDSVNGMIASKAARMRSIVV 193 (226)
T ss_dssp EEESSHHHHHHHHHTTCEEEEC
T ss_pred EEeCCHHHHHHHHHcCCEEEEE
Confidence 9999999999999999998874
No 71
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=99.71 E-value=1.9e-17 Score=123.03 Aligned_cols=116 Identities=16% Similarity=0.052 Sum_probs=89.5
Q ss_pred CccEEEEecCCccccccccccccCCCCccC-ccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLY-PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLS 99 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~-pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~ 99 (149)
.+++++||+||||+++..++...++....+ ..-..+|++|+++|++++|+||++... ++..++.+|+..+|.. .+
T Consensus 25 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~-~~~~l~~lgl~~~~~~---~k 100 (188)
T 2r8e_A 25 NIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKL-VEDRCATLGITHLYQG---QS 100 (188)
T ss_dssp TCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHH-HHHHHHHHTCCEEECS---CS
T ss_pred cCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHH-HHHHHHHcCCceeecC---CC
Confidence 479999999999998654433222211111 112247999999999999999999998 7999999999877754 48
Q ss_pred CChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 100 CCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 100 p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
|+|.....+. .++++++|+++.|+.+++.+|++||+.+++.
T Consensus 101 pk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~ 143 (188)
T 2r8e_A 101 NKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA 143 (188)
T ss_dssp CSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec
Confidence 8885554444 4677899999999999999999999998764
No 72
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=99.70 E-value=3.5e-17 Score=120.83 Aligned_cols=93 Identities=16% Similarity=0.121 Sum_probs=77.5
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..+.|++.++++.++++|++++++||++... +...++.+++..+|+... ..+|+|.+...+. .++++++|+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i 166 (225)
T 3d6j_A 88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFR-ILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVL 166 (225)
T ss_dssp CEECTTHHHHHHHHHHHTCEEEEECSSCHHH-HHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCHHH-HHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeE
Confidence 4568999999999999999999999998887 688999999988877642 2477775544444 567789999
Q ss_pred EEeehHhHHHHHHHhCCchhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
+|.|++|++.+|++||+.++.+
T Consensus 167 ~iGD~~nDi~~~~~aG~~~~~~ 188 (225)
T 3d6j_A 167 YIGDSTVDAGTAAAAGVSFTGV 188 (225)
T ss_dssp EEESSHHHHHHHHHHTCEEEEE
T ss_pred EEcCCHHHHHHHHHCCCeEEEE
Confidence 9999999999999999998773
No 73
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.70 E-value=4.4e-17 Score=118.43 Aligned_cols=93 Identities=17% Similarity=0.177 Sum_probs=77.1
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..+.|++.++|+.++++|++++++||+.... .. .++.+++..+|+... ..||+|.....+. .++++++|+
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~ 161 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNA-FT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY 161 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHH-HH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHH-HH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEE
Confidence 4578999999999999999999999999887 68 889999988877542 3467775544443 667889999
Q ss_pred EEeehHhHHHHHHHhCCchhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+|.|+.|++.+|++||+.++.+.
T Consensus 162 ~iGD~~nDi~~~~~aG~~~i~~~ 184 (207)
T 2go7_A 162 YIGDRTLDVEFAQNSGIQSINFL 184 (207)
T ss_dssp EEESSHHHHHHHHHHTCEEEESS
T ss_pred EECCCHHHHHHHHHCCCeEEEEe
Confidence 99999999999999999976553
No 74
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=99.70 E-value=4.3e-17 Score=122.65 Aligned_cols=92 Identities=13% Similarity=-0.003 Sum_probs=76.2
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccc------cccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM------VRLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~------~~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++|++.++|+.|+++ ++++++||++... +...++.+|+. |+.+ ...||+|.+...+. .++++++|+
T Consensus 115 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~-~~~~l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 190 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAE-YIIGPLSNGNTSL-LLDMAKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVM 190 (254)
T ss_dssp CCBCTTHHHHHHHHHHH-SEEEECSSSCHHH-HHHHHHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred CcCCcCHHHHHHHHHhC-CeEEEEeCCCHHH-HHHHHHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 46789999999999997 9999999999888 68999999985 5443 24577775544444 567889999
Q ss_pred EEeehHhHHHHHHHhCCchhhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
+|.|++|++.+|++||+.++.+.|
T Consensus 191 ~iGD~~~Di~~a~~aG~~~~~~~~ 214 (254)
T 3umg_A 191 LAAAHNGDLEAAHATGLATAFILR 214 (254)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECC
T ss_pred EEeCChHhHHHHHHCCCEEEEEec
Confidence 999999999999999999988764
No 75
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=99.70 E-value=9.7e-18 Score=134.86 Aligned_cols=118 Identities=15% Similarity=0.028 Sum_probs=94.9
Q ss_pred CCCccEEEEecCCcccccccccc---------------------------------------------ccCCCCccCccH
Q 032013 19 ENLPRLVVFDLDYTLWPFYCECC---------------------------------------------YEDEIPYLYPHA 53 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~~~~~~---------------------------------------------~~~~~~~~~pg~ 53 (149)
.+.+++++||+||||++.+.... .-.+..+++||+
T Consensus 105 ~~~~kaviFDlDGTLid~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~~~~~~~~l~pg~ 184 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSPGL 184 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHTCCBCTTH
T ss_pred CCCCCEEEEcCCCCccCCccHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHhCCEECcCH
Confidence 45689999999999999642100 001236799999
Q ss_pred HHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc----------------ccCCChhHHHHHH----hhCC
Q 032013 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV----------------RLSCCIMCIIFFL----FFFS 113 (149)
Q Consensus 54 ~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~----------------~~~p~p~~~i~~~----~~~~ 113 (149)
.++|++|+++|++++|+||+.... ++..++.+|+..+|+... ..+|+| .+|.. .+++
T Consensus 185 ~e~L~~Lk~~G~~v~IvSn~~~~~-~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp--~~~~~~~~~lgv~ 261 (317)
T 4eze_A 185 LTILPVIKAKGFKTAIISGGLDIF-TQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKK--QTLVDLAARLNIA 261 (317)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHH--HHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCCEEEEEeCccHHH-HHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCH--HHHHHHHHHcCCC
Confidence 999999999999999999999888 799999999998887541 124555 55554 5688
Q ss_pred CcceEEEeehHhHHHHHHHhCCchhh
Q 032013 114 ISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 114 ~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
+++|++++||++++.+|++||+.+.+
T Consensus 262 ~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 262 TENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp GGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred cceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 89999999999999999999997765
No 76
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=2e-17 Score=128.52 Aligned_cols=93 Identities=20% Similarity=0.070 Sum_probs=76.5
Q ss_pred CCccCccHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHHHcCCCCCcccc------cccCCChhHHHHHH--hhC----
Q 032013 46 IPYLYPHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM------VRLSCCIMCIIFFL--FFF---- 112 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~-Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~------~~~~p~p~~~i~~~--~~~---- 112 (149)
...+.|++.++|+.|+++ |++++++||+.... +...++.+++.. |+.+ ...+|+|.+...+. .++
T Consensus 112 ~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~-~~~~l~~~~l~~-f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 189 (275)
T 2qlt_A 112 HSIEVPGAVKLCNALNALPKEKWAVATSGTRDM-AKKWFDILKIKR-PEYFITANDVKQGKPHPEPYLKGRNGLGFPINE 189 (275)
T ss_dssp TCEECTTHHHHHHHHHTSCGGGEEEECSSCHHH-HHHHHHHHTCCC-CSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCS
T ss_pred CCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHH-HHHHHHHcCCCc-cCEEEEcccCCCCCCChHHHHHHHHHcCCCccc
Confidence 356889999999999999 99999999999888 789999998863 4433 23477775555444 567
Q ss_pred ---CCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 113 ---SISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 113 ---~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
++++|++|+|++|++.+|++||+.++.+
T Consensus 190 ~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v 220 (275)
T 2qlt_A 190 QDPSKSKVVVFEDAPAGIAAGKAAGCKIVGI 220 (275)
T ss_dssp SCGGGSCEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred cCCCcceEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 7899999999999999999999998874
No 77
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=99.70 E-value=1.3e-17 Score=122.52 Aligned_cols=91 Identities=15% Similarity=0.013 Sum_probs=71.4
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc---------------c-cCCChhHHHHHH-
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV---------------R-LSCCIMCIIFFL- 109 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~---------------~-~~p~p~~~i~~~- 109 (149)
..+.|++.++|++++++|++++++||++... +...++.+++..+|.... . ..++|.+...+.
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIA-VNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHH-HHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHH-HHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 4578999999999999999999999998877 688889999877664321 0 123443344333
Q ss_pred -hhCCCcceEEEeehHhHHHHHHHhCCchh
Q 032013 110 -FFFSISAFILFVDLFCFMYAAAYVGCDLY 138 (149)
Q Consensus 110 -~~~~~~~~l~~eDs~~gi~aa~~ag~~~~ 138 (149)
.++++++|++|+||.|++.+|++||+.+.
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~ 183 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMFKKAGLKIA 183 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred HcCCCHHHEEEEecChhHHHHHHHCCCEEE
Confidence 56788999999999999999999999754
No 78
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=99.70 E-value=2.9e-17 Score=125.09 Aligned_cols=92 Identities=9% Similarity=0.041 Sum_probs=78.8
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc-ccCCChhHHHHHH--hhCCCcceEEEeeh
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV-RLSCCIMCIIFFL--FFFSISAFILFVDL 123 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~-~~~p~p~~~i~~~--~~~~~~~~l~~eDs 123 (149)
..++|++.++|+.|+ +|++++++||++... +...++.+++..+|+.+. ..||+|.+...+. .++++++|++|+|+
T Consensus 111 ~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~-~~~~l~~~~l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~ 188 (251)
T 2pke_A 111 VEVIAGVREAVAAIA-ADYAVVLITKGDLFH-QEQKIEQSGLSDLFPRIEVVSEKDPQTYARVLSEFDLPAERFVMIGNS 188 (251)
T ss_dssp CCBCTTHHHHHHHHH-TTSEEEEEEESCHHH-HHHHHHHHSGGGTCCCEEEESCCSHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred CCcCccHHHHHHHHH-CCCEEEEEeCCCHHH-HHHHHHHcCcHHhCceeeeeCCCCHHHHHHHHHHhCcCchhEEEECCC
Confidence 457899999999999 999999999999887 689999999999988764 4577775554444 56888999999999
Q ss_pred H-hHHHHHHHhCCchhhh
Q 032013 124 F-CFMYAAAYVGCDLYVY 140 (149)
Q Consensus 124 ~-~gi~aa~~ag~~~~~~ 140 (149)
+ |++.+|++||+.++.+
T Consensus 189 ~~~Di~~a~~aG~~~~~v 206 (251)
T 2pke_A 189 LRSDVEPVLAIGGWGIYT 206 (251)
T ss_dssp CCCCCHHHHHTTCEEEEC
T ss_pred chhhHHHHHHCCCEEEEE
Confidence 9 9999999999998876
No 79
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=99.69 E-value=5.2e-17 Score=122.83 Aligned_cols=92 Identities=13% Similarity=0.015 Sum_probs=75.8
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccc------cccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM------VRLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~------~~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++|++.++|+.|+++ ++++++||++... +...++.+|+. |+.+ ...||+|.+...+. .+++|++|+
T Consensus 119 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~-~~~~l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 194 (254)
T 3umc_A 119 LRPWPDTLAGMHALKAD-YWLAALSNGNTAL-MLDVARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVM 194 (254)
T ss_dssp CEECTTHHHHHHHHTTT-SEEEECCSSCHHH-HHHHHHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHH-HHHHHHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEE
Confidence 45689999999999986 9999999999888 68999999985 5543 24577775544443 668889999
Q ss_pred EEeehHhHHHHHHHhCCchhhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
+|.|+.+++.+|++||+.++.+.|
T Consensus 195 ~iGD~~~Di~~a~~aG~~~~~~~~ 218 (254)
T 3umc_A 195 LCAAHNYDLKAARALGLKTAFIAR 218 (254)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECC
T ss_pred EEcCchHhHHHHHHCCCeEEEEec
Confidence 999999999999999999988764
No 80
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=99.69 E-value=3.3e-17 Score=122.26 Aligned_cols=89 Identities=18% Similarity=0.124 Sum_probs=72.5
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHH--hhCCCcceE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~--~~~~~~~~l 118 (149)
..++|++.++|+.|+++ ++++++||++.. ++.+|+..+|+.+. ..||+|.+...+. .+++|++|+
T Consensus 104 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~------l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (230)
T 3vay_A 104 VQIFPEVQPTLEILAKT-FTLGVITNGNAD------VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAV 176 (230)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEESSCCC------GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CccCcCHHHHHHHHHhC-CeEEEEECCchh------hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheE
Confidence 45899999999999998 999999998754 46788888888752 3377774444443 668889999
Q ss_pred EEeehH-hHHHHHHHhCCchhhhhh
Q 032013 119 LFVDLF-CFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 119 ~~eDs~-~gi~aa~~ag~~~~~~~~ 142 (149)
+|.|++ +++.+|++||++++.+.+
T Consensus 177 ~vGD~~~~Di~~a~~aG~~~~~v~~ 201 (230)
T 3vay_A 177 HVGDHPSDDIAGAQQAGMRAIWYNP 201 (230)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECT
T ss_pred EEeCChHHHHHHHHHCCCEEEEEcC
Confidence 999998 999999999999987654
No 81
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=99.69 E-value=5.4e-17 Score=119.35 Aligned_cols=92 Identities=15% Similarity=0.050 Sum_probs=71.1
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC--Cccc------c------cccCCChhHHHHHH---
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS--MFVP------M------VRLSCCIMCIIFFL--- 109 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~--~f~~------~------~~~~p~p~~~i~~~--- 109 (149)
..+.|++.++|++|+++|++++++||++... ++..++.+|+.. +|.. . ...+|+|...+...
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSES-IQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHH-HHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 3588999999999999999999999999888 799999999843 4431 1 22355553333322
Q ss_pred hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 110 FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 110 ~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
.++++++|++|.||.|++.++ ++||.++.+
T Consensus 160 ~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v 189 (219)
T 3kd3_A 160 KGLIDGEVIAIGDGYTDYQLY-EKGYATKFI 189 (219)
T ss_dssp GGGCCSEEEEEESSHHHHHHH-HHTSCSEEE
T ss_pred hCCCCCCEEEEECCHhHHHHH-hCCCCcEEE
Confidence 478899999999999999998 689986543
No 82
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=99.68 E-value=3.1e-18 Score=128.70 Aligned_cols=93 Identities=23% Similarity=0.276 Sum_probs=73.0
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc------ccCCChhHHHHHHhhCCCcceEEE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV------RLSCCIMCIIFFLFFFSISAFILF 120 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~------~~~p~p~~~i~~~~~~~~~~~l~~ 120 (149)
..++||+.++|++|+++|++++++||++. . +...++.+|+..+|+.+. ..||+|..+..+...++... +++
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~-~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~v 170 (220)
T 2zg6_A 94 AFLYDDTLEFLEGLKSNGYKLALVSNASP-R-VKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA-VHV 170 (220)
T ss_dssp EEECTTHHHHHHHHHTTTCEEEECCSCHH-H-HHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSE-EEE
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEeCCcH-H-HHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe-EEE
Confidence 36789999999999999999999999975 5 688999999999987652 34777755555554455544 999
Q ss_pred eehHh-HHHHHHHhCCchhhhhh
Q 032013 121 VDLFC-FMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 121 eDs~~-gi~aa~~ag~~~~~~~~ 142 (149)
+||++ ++.+|++|||+++.+.+
T Consensus 171 gD~~~~Di~~a~~aG~~~i~v~~ 193 (220)
T 2zg6_A 171 GDIYELDYIGAKRSYVDPILLDR 193 (220)
T ss_dssp ESSCCCCCCCSSSCSEEEEEBCT
T ss_pred cCCchHhHHHHHHCCCeEEEECC
Confidence 99999 99999999999987754
No 83
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=99.68 E-value=1.3e-16 Score=122.11 Aligned_cols=93 Identities=10% Similarity=-0.059 Sum_probs=75.9
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc-ccc------cccCCChhHHHHHH--hhCCC-cc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF-VPM------VRLSCCIMCIIFFL--FFFSI-SA 116 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f-~~~------~~~~p~p~~~i~~~--~~~~~-~~ 116 (149)
..++|++.++++.|+++|++++++||++... +...++.+++..+| +.. ...+|+|.+...+. .++++ ++
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 180 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREM-MDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH 180 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHH-HHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHH-HHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcC
Confidence 3568999999999999999999999998887 68888888777665 433 23577876555554 56778 89
Q ss_pred eEEEeehHhHHHHHHHhCCchhhh
Q 032013 117 FILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 117 ~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
|++|.|+.|++.+|++||+.++.+
T Consensus 181 ~i~iGD~~nDi~~a~~aG~~~i~v 204 (267)
T 1swv_A 181 MIKVGDTVSDMKEGRNAGMWTVGV 204 (267)
T ss_dssp EEEEESSHHHHHHHHHTTSEEEEE
T ss_pred EEEEeCCHHHHHHHHHCCCEEEEE
Confidence 999999999999999999987764
No 84
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=99.68 E-value=9.7e-17 Score=118.54 Aligned_cols=113 Identities=18% Similarity=0.040 Sum_probs=85.5
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHH--HHHHHHHHCCceEEEEeCCCchHHHHHHHH--HcCCCCCcccc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAK--GILEALKEKGIHVAVASRSPAPDIAKTFLH--KLGIHSMFVPM 95 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~--e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~--~~gl~~~f~~~ 95 (149)
..+|+++||+||||+++...+.++++....+ .+. ..|++|+++|++++|+||+ .. ++..++ .+++. +|.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f-~~~D~~~L~~Lk~~Gi~~~I~Tg~--~~-~~~~l~~l~lgi~-~~~-- 79 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISY-DVKDAIGISLLKKSGIEVRLISER--AC-SKQTLSALKLDCK-TEV-- 79 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEE-EHHHHHHHHHHHHTTCEEEEECSS--CC-CHHHHHTTCCCCC-EEC--
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEE-ecCcHHHHHHHHHCCCEEEEEeCc--HH-HHHHHHHhCCCcE-EEE--
Confidence 4589999999999999765554444333333 222 4699999999999999999 45 678899 67776 543
Q ss_pred cccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 96 VRLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 96 ~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
+.+++|.+...+. .++++++|+.|.|+.|++.++++||+.+.+.
T Consensus 80 -g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~ 125 (168)
T 3ewi_A 80 -SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA 125 (168)
T ss_dssp -SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT
T ss_pred -CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC
Confidence 3466665554444 5677899999999999999999999887663
No 85
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=99.67 E-value=2.2e-16 Score=131.12 Aligned_cols=119 Identities=18% Similarity=0.154 Sum_probs=87.6
Q ss_pred CCccEEEEecCCcccccccc--ccccC-CCCccCccHHHHHHHHHHCCceEEEEeCCC------------chHHHHHHHH
Q 032013 20 NLPRLVVFDLDYTLWPFYCE--CCYED-EIPYLYPHAKGILEALKEKGIHVAVASRSP------------APDIAKTFLH 84 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~--~~~~~-~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~------------~~~i~~~~l~ 84 (149)
.++++++||+||||++.... +.... ....++||+.++|++|+++|++++|+||++ ... +...++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~-~~~~l~ 134 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGK-VEAVLE 134 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHH-HHHHHH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHH-HHHHHH
Confidence 45799999999999974210 11111 112478999999999999999999999975 222 467888
Q ss_pred HcCCCCCcccc------cccCCChhHHHHHHh--h----CCCcceEEEeehH-----------------hHHHHHHHhCC
Q 032013 85 KLGIHSMFVPM------VRLSCCIMCIIFFLF--F----FSISAFILFVDLF-----------------CFMYAAAYVGC 135 (149)
Q Consensus 85 ~~gl~~~f~~~------~~~~p~p~~~i~~~~--~----~~~~~~l~~eDs~-----------------~gi~aa~~ag~ 135 (149)
.+|+. |+.+ ...||+|.....+.. + +++++|++++|+. +++++|++||+
T Consensus 135 ~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi 212 (416)
T 3zvl_A 135 KLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGL 212 (416)
T ss_dssp HHTSC--CEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTC
T ss_pred HcCCC--EEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCC
Confidence 99974 5543 245888854444443 3 6789999999997 89999999999
Q ss_pred chhhhh
Q 032013 136 DLYVYK 141 (149)
Q Consensus 136 ~~~~~~ 141 (149)
+.+...
T Consensus 213 ~f~~pe 218 (416)
T 3zvl_A 213 PFATPE 218 (416)
T ss_dssp CEECHH
T ss_pred cccCcH
Confidence 976543
No 86
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=99.66 E-value=6.6e-17 Score=123.07 Aligned_cols=90 Identities=13% Similarity=-0.005 Sum_probs=70.2
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccc----cc----------cCCChhH--------
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM----VR----------LSCCIMC-------- 104 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~----~~----------~~p~p~~-------- 104 (149)
.+++||+.++|++|+++|++++|+||++... ++..++ |+..+ +.+ .. .||+|..
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~-~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFF-VYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHH-HHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHH-HHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCc
Confidence 5789999999999999999999999998877 688877 66443 332 11 4566632
Q ss_pred --HHHHHhhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 105 --IIFFLFFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 105 --~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
.+.-..++++++|++++||.+++.+|++||+.++.+
T Consensus 152 K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~ 189 (236)
T 2fea_A 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD 189 (236)
T ss_dssp HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH
T ss_pred HHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech
Confidence 111225688899999999999999999999998643
No 87
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=99.66 E-value=7.3e-17 Score=126.59 Aligned_cols=120 Identities=13% Similarity=0.087 Sum_probs=85.2
Q ss_pred CCCccEEEEecCCcccccccccc----------c------cCCCCccCccHHHHHHHHHHCCceEEEEeCCC---chHHH
Q 032013 19 ENLPRLVVFDLDYTLWPFYCECC----------Y------EDEIPYLYPHAKGILEALKEKGIHVAVASRSP---APDIA 79 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~~~~~~----------~------~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~---~~~i~ 79 (149)
...+++|+||+||||+++..++. . .....+++||+.++|++|+++|++++|+||++ +.. +
T Consensus 56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~-~ 134 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDA-T 134 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHH-H
T ss_pred CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHH-H
Confidence 45689999999999999632110 0 00114789999999999999999999999998 445 5
Q ss_pred HHHHHHcCCC--CCcccccccC--CChhHHHHHHhhCCCcceEEEeehHhHHHHHH-------H---------hCCchhh
Q 032013 80 KTFLHKLGIH--SMFVPMVRLS--CCIMCIIFFLFFFSISAFILFVDLFCFMYAAA-------Y---------VGCDLYV 139 (149)
Q Consensus 80 ~~~l~~~gl~--~~f~~~~~~~--p~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~-------~---------ag~~~~~ 139 (149)
...++.+|+. .+|+.+.... ..|.+...+. ..+...|++++||.+||.+|. + |||++|+
T Consensus 135 ~~~L~~~Gl~~v~~~~vi~~~~~~~K~~~~~~~~-~~~~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~ 213 (258)
T 2i33_A 135 IKNLERVGAPQATKEHILLQDPKEKGKEKRRELV-SQTHDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFII 213 (258)
T ss_dssp HHHHHHHTCSSCSTTTEEEECTTCCSSHHHHHHH-HHHEEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEE
T ss_pred HHHHHHcCCCcCCCceEEECCCCCCCcHHHHHHH-HhCCCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEE
Confidence 7788899998 5665443221 1233333322 223446899999999999993 4 7999887
Q ss_pred h
Q 032013 140 Y 140 (149)
Q Consensus 140 ~ 140 (149)
+
T Consensus 214 l 214 (258)
T 2i33_A 214 F 214 (258)
T ss_dssp C
T ss_pred C
Confidence 5
No 88
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=99.65 E-value=1.4e-16 Score=117.89 Aligned_cols=92 Identities=11% Similarity=0.004 Sum_probs=75.1
Q ss_pred CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc-cc----cc----c-CCChhHHHHHH--hhCC
Q 032013 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV-PM----VR----L-SCCIMCIIFFL--FFFS 113 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~-~~----~~----~-~p~p~~~i~~~--~~~~ 113 (149)
..+++||+.++|++|+++ ++++|+||++... ++..++.+|+..+|. .. .. . +|+|....... .+..
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~-~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~ 144 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEF-SQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHH-HHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChHHH-HHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhc
Confidence 357899999999999999 9999999998887 799999999999884 22 11 1 37774443333 5678
Q ss_pred CcceEEEeehHhHHHHHHHhCCchhh
Q 032013 114 ISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 114 ~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
+++|++++||++++.+|++||+.+++
T Consensus 145 ~~~~~~iGD~~~Di~~a~~aG~~~~~ 170 (206)
T 1rku_A 145 YYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp TCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred CCEEEEEeCChhhHHHHHhcCccEEE
Confidence 89999999999999999999998654
No 89
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.65 E-value=6.4e-17 Score=133.48 Aligned_cols=118 Identities=17% Similarity=0.024 Sum_probs=94.0
Q ss_pred CCCccEEEEecCCcccccccccc---------------------------------------------ccCCCCccCccH
Q 032013 19 ENLPRLVVFDLDYTLWPFYCECC---------------------------------------------YEDEIPYLYPHA 53 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~~~~~~---------------------------------------------~~~~~~~~~pg~ 53 (149)
.+++++++||+||||++.+.... ...+..+++||+
T Consensus 182 ~~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pg~ 261 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQLELMPGA 261 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHHHHCCBCTTH
T ss_pred ccCCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHHHhCccCccH
Confidence 56689999999999999643200 001235789999
Q ss_pred HHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccc--------------c--ccCCChhHHHHHH----hhCC
Q 032013 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM--------------V--RLSCCIMCIIFFL----FFFS 113 (149)
Q Consensus 54 ~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~--------------~--~~~p~p~~~i~~~----~~~~ 113 (149)
.++|++|+++|++++|+||+.... ++..++.+|+..+|... . ..+|+| .+|.. .+++
T Consensus 262 ~e~l~~Lk~~G~~~~ivS~~~~~~-~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~--~~~~~~~~~~gi~ 338 (415)
T 3p96_A 262 RTTLRTLRRLGYACGVVSGGFRRI-IEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKA--TALREFAQRAGVP 338 (415)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHH--HHHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCEEEEEcCCcHHH-HHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchH--HHHHHHHHHcCcC
Confidence 999999999999999999999888 79999999998877532 1 134555 55554 5688
Q ss_pred CcceEEEeehHhHHHHHHHhCCchhh
Q 032013 114 ISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 114 ~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
+++|+++.|+.+++.+|++||+.+.+
T Consensus 339 ~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 339 MAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp GGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred hhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 89999999999999999999998765
No 90
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=99.65 E-value=7.3e-19 Score=131.07 Aligned_cols=86 Identities=9% Similarity=-0.011 Sum_probs=72.7
Q ss_pred CCccCccHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHHHcCCCC-CcccccccCCChhHHHHHHhhCCCcceEEEeeh
Q 032013 46 IPYLYPHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHS-MFVPMVRLSCCIMCIIFFLFFFSISAFILFVDL 123 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~-Gi~i~IaT~~~~~~i~~~~l~~~gl~~-~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs 123 (149)
...++||+.++|++|+++ |++++|+||++... ++..++.+|+.. +|+ . ...-..+++|++|++++||
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~-~~~~l~~~~l~~~~f~--------~--~~~~~l~~~~~~~~~vgDs 141 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMF-KYCPYEKYAWVEKYFG--------P--DFLEQIVLTRDKTVVSADL 141 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCC-SSHHHHHHHHHHHHHC--------G--GGGGGEEECSCSTTSCCSE
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccch-HHHHHHHhchHHHhch--------H--HHHHHhccCCccEEEECcc
Confidence 457899999999999999 99999999999887 688889999877 775 1 1112256888999999999
Q ss_pred HhH----HHHHH-HhCCchhhhhh
Q 032013 124 FCF----MYAAA-YVGCDLYVYKR 142 (149)
Q Consensus 124 ~~g----i~aa~-~ag~~~~~~~~ 142 (149)
.+| +++|+ +|||+++.+.+
T Consensus 142 ~~dD~~~~~~a~~~aG~~~i~~~~ 165 (197)
T 1q92_A 142 LIDDRPDITGAEPTPSWEHVLFTA 165 (197)
T ss_dssp EEESCSCCCCSCSSCSSEEEEECC
T ss_pred cccCCchhhhcccCCCceEEEecC
Confidence 999 99999 99999998753
No 91
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=99.65 E-value=1.4e-16 Score=118.46 Aligned_cols=92 Identities=15% Similarity=0.068 Sum_probs=74.2
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc-ccc------ccc--CCChhHHHHHH--hhCCCc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF-VPM------VRL--SCCIMCIIFFL--FFFSIS 115 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f-~~~------~~~--~p~p~~~i~~~--~~~~~~ 115 (149)
..+.|++.++|+.++. +++++||++... +...++.+++..+| +.+ ... +|+|.+...+. .+++++
T Consensus 86 ~~~~~~~~~~l~~l~~---~~~i~s~~~~~~-~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~ 161 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT---PRCICSNSSSHR-LDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPD 161 (229)
T ss_dssp CCBCTTHHHHHHHCCS---CEEEEESSCHHH-HHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGG
T ss_pred CccCcCHHHHHHHhCC---CEEEEECCChhH-HHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChh
Confidence 4577888888887764 899999998887 68999999998888 543 234 77775555554 668889
Q ss_pred ceEEEeehHhHHHHHHHhCCchhhhhh
Q 032013 116 AFILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 116 ~~l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
+|++|.|++|++.+|++||+.++.+.+
T Consensus 162 ~~i~iGD~~~Di~~a~~aG~~~i~~~~ 188 (229)
T 2fdr_A 162 RVVVVEDSVHGIHGARAAGMRVIGFTG 188 (229)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEEECC
T ss_pred HeEEEcCCHHHHHHHHHCCCEEEEEec
Confidence 999999999999999999999776543
No 92
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=99.62 E-value=4.7e-18 Score=126.13 Aligned_cols=87 Identities=7% Similarity=-0.016 Sum_probs=72.4
Q ss_pred CCccCccHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehH
Q 032013 46 IPYLYPHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLF 124 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~-Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~ 124 (149)
..+++||+.++|++|+++ |++++|+||++... +...++.+|+ |+.+... +..-..+++|++|++++||+
T Consensus 71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~-~~~~l~~~gl---f~~i~~~------~~~~~~~~~~~~~~~vgDs~ 140 (193)
T 2i7d_A 71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKY-HHCVGEKYRW---VEQHLGP------QFVERIILTRDKTVVLGDLL 140 (193)
T ss_dssp TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSC-TTTHHHHHHH---HHHHHCH------HHHTTEEECSCGGGBCCSEE
T ss_pred cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhh-HHHHHHHhCc---hhhhcCH------HHHHHcCCCcccEEEECCch
Confidence 467899999999999999 99999999999888 6888998887 5543321 22223678899999999999
Q ss_pred hH----HHHHH-HhCCchhhhhh
Q 032013 125 CF----MYAAA-YVGCDLYVYKR 142 (149)
Q Consensus 125 ~g----i~aa~-~ag~~~~~~~~ 142 (149)
++ +.+|+ +|||+++.+.+
T Consensus 141 ~dD~~~i~~A~~~aG~~~i~~~~ 163 (193)
T 2i7d_A 141 IDDKDTVRGQEETPSWEHILFTC 163 (193)
T ss_dssp EESSSCCCSSCSSCSSEEEEECC
T ss_pred hhCcHHHhhcccccccceEEEEe
Confidence 99 99999 99999998753
No 93
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=99.61 E-value=3.6e-15 Score=117.41 Aligned_cols=115 Identities=13% Similarity=0.084 Sum_probs=82.8
Q ss_pred CccEEEEecCCcccccccc----ccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchH--HHHHHHHH--------c
Q 032013 21 LPRLVVFDLDYTLWPFYCE----CCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPD--IAKTFLHK--------L 86 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~----~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~--i~~~~l~~--------~ 86 (149)
.++.+++|+|||+.+.... |. ......++||+.++|+.|+++|++++|+||++... .+...++. +
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~~~~~-~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~ 236 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGPYDLE-KCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIA 236 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCTTCGG-GGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTT
T ss_pred ccceEEEeCCCCcccccCCCchhhh-hccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhccccccccc
Confidence 3578999999999874221 11 11224689999999999999999999999998542 03566777 8
Q ss_pred CCCCCccccc-----ccCCChhHHHHHH----hhCCC-cceEEEeehHhHHHHHHHhCCchhhh
Q 032013 87 GIHSMFVPMV-----RLSCCIMCIIFFL----FFFSI-SAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 87 gl~~~f~~~~-----~~~p~p~~~i~~~----~~~~~-~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
|+ +|+.+. ..||+| +++++ .+.++ +.|++++||.+||+||++|||+++.+
T Consensus 237 ~~--~~~~~~~~~~~~~kp~p--~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v 296 (301)
T 1ltq_A 237 GV--PLVMQCQREQGDTRKDD--VVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQV 296 (301)
T ss_dssp CC--CCSEEEECCTTCCSCHH--HHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred CC--CchheeeccCCCCcHHH--HHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEe
Confidence 88 355432 235555 55554 23444 45799999999999999999998753
No 94
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=99.61 E-value=3.9e-15 Score=113.29 Aligned_cols=45 Identities=22% Similarity=0.271 Sum_probs=36.9
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP 74 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~ 74 (149)
.++|+|+||+||||+++ . ...+++.++++.++++|+++.++||+.
T Consensus 5 ~~ik~i~fDlDGTLld~------~----~~~~~~~~ai~~l~~~G~~~~~~t~~~ 49 (259)
T 2ho4_A 5 RALKAVLVDLNGTLHIE------D----AAVPGAQEALKRLRATSVMVRFVTNTT 49 (259)
T ss_dssp -CCCEEEEESSSSSCC-------------CCTTHHHHHHHHHTSSCEEEEEECCS
T ss_pred hhCCEEEEeCcCcEEeC------C----EeCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 35899999999999983 2 345788999999999999999999654
No 95
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=99.61 E-value=1e-16 Score=116.86 Aligned_cols=91 Identities=21% Similarity=0.156 Sum_probs=71.3
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc-------ccCCChhHHHHHHhhCCCcceEE
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV-------RLSCCIMCIIFFLFFFSISAFIL 119 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~-------~~~p~p~~~i~~~~~~~~~~~l~ 119 (149)
..+.|++.++|++|+++|++++++||++... +... +.+|+..++.... ..+|.|.........+++++|++
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l~~~~~i~ 155 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEV-LEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRFRDGFILA 155 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTT-SGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGGTTSCEEE
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHH-HHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhcCcCcEEE
Confidence 5789999999999999999999999998877 6777 8889877633321 22444433334445568899999
Q ss_pred EeehHhHHHHHHHhCCchhh
Q 032013 120 FVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 120 ~eDs~~gi~aa~~ag~~~~~ 139 (149)
|+||+|++.+|++||+.+.+
T Consensus 156 iGD~~~Di~~~~~ag~~v~~ 175 (201)
T 4ap9_A 156 MGDGYADAKMFERADMGIAV 175 (201)
T ss_dssp EECTTCCHHHHHHCSEEEEE
T ss_pred EeCCHHHHHHHHhCCceEEE
Confidence 99999999999999998544
No 96
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=99.61 E-value=1.5e-15 Score=125.37 Aligned_cols=94 Identities=16% Similarity=0.153 Sum_probs=78.8
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc--ccc-----------------ccCCChhHHHH
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV--PMV-----------------RLSCCIMCIIF 107 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~--~~~-----------------~~~p~p~~~i~ 107 (149)
..++||+.++|+.|+++|++++|+||++... +...++.+|+..+|+ .+. ..||+|.++..
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~-~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~ 292 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTE-TVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHH-HHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence 5789999999999999999999999999988 799999999999998 331 15777744443
Q ss_pred HHhh----------------CCCcceEEEeehHhHHHHHHHhCCchhhhh
Q 032013 108 FLFF----------------FSISAFILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 108 ~~~~----------------~~~~~~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
+... ++|++|++++||++||+||++|||+++.+.
T Consensus 293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~ 342 (384)
T 1qyi_A 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL 342 (384)
T ss_dssp HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 3333 568999999999999999999999988653
No 97
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.59 E-value=2.1e-16 Score=119.45 Aligned_cols=117 Identities=15% Similarity=0.017 Sum_probs=89.7
Q ss_pred CCccEEEEecCCcccccccccccc--------------CCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHH
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYE--------------DEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK 85 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~--------------~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~ 85 (149)
...+++++|+||||+++....... .-.+..+||+.++|+++++. ++++|+|++++.. ++.+++.
T Consensus 26 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~-a~~vl~~ 103 (195)
T 2hhl_A 26 YGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKY-ADPVADL 103 (195)
T ss_dssp TTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHH-HHHHHHH
T ss_pred CCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHH-HHHHHHH
Confidence 346789999999999852110000 01246799999999999998 9999999999999 8999999
Q ss_pred cCCCCCccccccc---CCChhHHHHHH----hhCCCcceEEEeehHhHHHHHHHhCCchhhh
Q 032013 86 LGIHSMFVPMVRL---SCCIMCIIFFL----FFFSISAFILFVDLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 86 ~gl~~~f~~~~~~---~p~p~~~i~~~----~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~~ 140 (149)
++...+|+..-.. .... ..|++ ++.++++|+++|||+.|+.++.++|+.+.-|
T Consensus 104 ld~~~~f~~~l~rd~~~~~k--~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~ 163 (195)
T 2hhl_A 104 LDRWGVFRARLFRESCVFHR--GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSW 163 (195)
T ss_dssp HCCSSCEEEEECGGGCEEET--TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCC
T ss_pred hCCcccEEEEEEcccceecC--CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeee
Confidence 9999988765211 0011 34444 5677799999999999999999999987654
No 98
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=99.58 E-value=5e-15 Score=115.21 Aligned_cols=93 Identities=13% Similarity=0.076 Sum_probs=78.1
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc---CCCCCccccc----ccCCChhHHHHHH----hhCCCc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL---GIHSMFVPMV----RLSCCIMCIIFFL----FFFSIS 115 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~---gl~~~f~~~~----~~~p~p~~~i~~~----~~~~~~ 115 (149)
..++||+.++|+.|+++|++++|+||++... ++..++.+ |+..+|+.+. +.||+| .+|.. .+++|+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~-~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p--~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEA-QKLLFGHSTEGDILELVDGHFDTKIGHKVES--ESYRKIADSIGCSTN 205 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHTBTTBCCGGGCSEEECGGGCCTTCH--HHHHHHHHHHTSCGG
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHH-HHHHHHhhcccChHhhccEEEecCCCCCCCH--HHHHHHHHHhCcCcc
Confidence 5789999999999999999999999999887 68888854 5888887642 256666 66654 678889
Q ss_pred ceEEEeehHhHHHHHHHhCCchhhhhh
Q 032013 116 AFILFVDLFCFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 116 ~~l~~eDs~~gi~aa~~ag~~~~~~~~ 142 (149)
+|++++||.++|.+|++|||+++.+.+
T Consensus 206 ~~l~VgDs~~di~aA~~aG~~~i~v~~ 232 (261)
T 1yns_A 206 NILFLTDVTREASAAEEADVHVAVVVR 232 (261)
T ss_dssp GEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred cEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence 999999999999999999999987643
No 99
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.57 E-value=1.4e-15 Score=116.90 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=67.4
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccc------cCCChhHHHHHHhhCCCcceEEEe
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVR------LSCCIMCIIFFLFFFSISAFILFV 121 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~------~~p~p~~~i~~~~~~~~~~~l~~e 121 (149)
.++||+.++|+.|+++|++++++||++... +...++.+|+..+|+.+.. .+|.| .+.+|++|+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~~~~~gl~~~f~~~~~~~k~~~~k~~~----------~~~~~~~vG 212 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFV-AKWVAEELGLDDYFAEVLPHEKAEKVKEVQ----------QKYVTAMVG 212 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCSEEECSCCGGGHHHHHHHHH----------TTSCEEEEE
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCChhHhHhcCHHHHHHHHHHHH----------hcCCEEEEe
Confidence 578999999999999999999999999988 7999999999998876532 23333 223899999
Q ss_pred ehHhHHHHHHHhCCchh
Q 032013 122 DLFCFMYAAAYVGCDLY 138 (149)
Q Consensus 122 Ds~~gi~aa~~ag~~~~ 138 (149)
|+.|++.+|++||+.+.
T Consensus 213 D~~nDi~~~~~Ag~~va 229 (280)
T 3skx_A 213 DGVNDAPALAQADVGIA 229 (280)
T ss_dssp CTTTTHHHHHHSSEEEE
T ss_pred CCchhHHHHHhCCceEE
Confidence 99999999999997543
No 100
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=99.56 E-value=2.3e-14 Score=110.40 Aligned_cols=58 Identities=28% Similarity=0.335 Sum_probs=44.4
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEe---CCCchHHHHHHHHHcCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS---RSPAPDIAKTFLHKLGI 88 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT---~~~~~~i~~~~l~~~gl 88 (149)
.++++++||+||||++. ..+.|++.+++++|+++|++++++| +++... ....++.+|+
T Consensus 15 ~~~~~v~~DlDGTLl~~----------~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~-~~~~~~~lg~ 75 (271)
T 1vjr_A 15 DKIELFILDMDGTFYLD----------DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQD-YVRKLRNMGV 75 (271)
T ss_dssp GGCCEEEECCBTTTEET----------TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHH-HHHHHHHTTC
T ss_pred cCCCEEEEcCcCcEEeC----------CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHH-HHHHHHHcCC
Confidence 34789999999999983 1467899999999999999999999 444444 3444444443
No 101
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=99.55 E-value=2.6e-14 Score=109.88 Aligned_cols=47 Identities=21% Similarity=0.217 Sum_probs=39.9
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
++++|+||+||||+++ . ...+++.+.++.++++|+++.++||++...
T Consensus 4 ~~k~v~fDlDGTL~~~------~----~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~ 50 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLG------K----EPIPAGKRFVERLQEKDLPFLFVTNNTTKS 50 (264)
T ss_dssp SCCEEEECCBTTTEET------T----EECHHHHHHHHHHHHTTCCEEEEECCCSSC
T ss_pred cCCEEEEeCCCeEEeC------C----EECcCHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 5899999999999983 1 245889999999999999999999987543
No 102
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=99.55 E-value=2.8e-14 Score=108.49 Aligned_cols=60 Identities=17% Similarity=0.148 Sum_probs=44.6
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEe---CCCchHHHHHHHHHcC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS---RSPAPDIAKTFLHKLG 87 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT---~~~~~~i~~~~l~~~g 87 (149)
++|+|+||+||||++. .++...+.++..++++.++++|+++.++| +++... +...++.+|
T Consensus 11 ~~k~i~fDlDGTLl~s------~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~-~~~~l~~~g 73 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDS------GAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAE-LVGQLQRLG 73 (271)
T ss_dssp TCCEEEECCBTTTEEC------CTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHH-HHHHHHHTT
T ss_pred cCCEEEEeCCCeEEec------CCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHH-HHHHHHHCC
Confidence 4899999999999983 21122467889999999999999999999 655554 344444443
No 103
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=99.55 E-value=3e-15 Score=119.97 Aligned_cols=93 Identities=14% Similarity=0.032 Sum_probs=76.0
Q ss_pred CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccc--------------c--ccCCChhHHHHHH
Q 032013 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM--------------V--RLSCCIMCIIFFL 109 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~--------------~--~~~p~p~~~i~~~ 109 (149)
..+++||+.++|+.|+++|++++++||+.... ++..++.+|+..+|... . ..+|+|.....+.
T Consensus 176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~-~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~ 254 (335)
T 3n28_A 176 TLPLMPELPELVATLHAFGWKVAIASGGFTYF-SDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLA 254 (335)
T ss_dssp TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHH
T ss_pred hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHH-HHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHH
Confidence 35789999999999999999999999998887 79999999998877642 1 1245553333333
Q ss_pred --hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 110 --FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 110 --~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.++++++|++|.|+.|++.+|++||+.+.+
T Consensus 255 ~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 255 QQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 668889999999999999999999998765
No 104
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=99.54 E-value=9.1e-15 Score=107.03 Aligned_cols=105 Identities=15% Similarity=0.069 Sum_probs=72.0
Q ss_pred ccEEEEecCCcccccccccc-------------------------------------c--cCCCCccCccHHHHHHHHHH
Q 032013 22 PRLVVFDLDYTLWPFYCECC-------------------------------------Y--EDEIPYLYPHAKGILEALKE 62 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~-------------------------------------~--~~~~~~~~pg~~e~L~~Lk~ 62 (149)
.++|+||+||||+|++..+. . ..+..+++||+.++|++|++
T Consensus 4 ~~~viFD~DGtL~Ds~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~ 83 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLGAVVKAVNERADLNIKMESLNGKKLKHMIPEHEGLVMDILKEPGFFRNLDVMPHAQEVVKQLNE 83 (180)
T ss_dssp CCEEEEETBTTTBCHHHHHHHHHHHHSCCCCCGGGCTTCCC--------CHHHHHHHSTTGGGSCCBCTTHHHHHHHHTT
T ss_pred ccEEEEeCCCcccccHHHHHHHHHHHhCCCCCHHHHcCccHHHHCCchHHHHHHHHhCcchhccCCCCcCHHHHHHHHHh
Confidence 47899999999999754210 0 01235789999999999998
Q ss_pred CCceEEEEeCC---CchH-HHHHHHHH-cCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehHhHHHHHHHhCCch
Q 032013 63 KGIHVAVASRS---PAPD-IAKTFLHK-LGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLFCFMYAAAYVGCDL 137 (149)
Q Consensus 63 ~Gi~i~IaT~~---~~~~-i~~~~l~~-~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag~~~ 137 (149)
+ ++++|+||+ +... .....++. ++...+++.+... +.. . .++|+++|||++|+. ++|| ++
T Consensus 84 ~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~--~~~-------~--l~~~l~ieDs~~~i~--~aaG-~~ 148 (180)
T 3bwv_A 84 H-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCG--RKN-------I--ILADYLIDDNPKQLE--IFEG-KS 148 (180)
T ss_dssp T-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECS--CGG-------G--BCCSEEEESCHHHHH--HCSS-EE
T ss_pred c-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeC--CcC-------e--ecccEEecCCcchHH--HhCC-Ce
Confidence 5 999999998 3221 12444555 5665555443322 220 1 178999999999995 4689 88
Q ss_pred hhhh
Q 032013 138 YVYK 141 (149)
Q Consensus 138 ~~~~ 141 (149)
+.+.
T Consensus 149 i~~~ 152 (180)
T 3bwv_A 149 IMFT 152 (180)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8764
No 105
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=99.52 E-value=1.1e-15 Score=114.50 Aligned_cols=44 Identities=11% Similarity=-0.119 Sum_probs=36.1
Q ss_pred ccCCChhHHHHHH--hhCCCcceEEEeeh-HhHHHHHHHhCCchhhh
Q 032013 97 RLSCCIMCIIFFL--FFFSISAFILFVDL-FCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 97 ~~~p~p~~~i~~~--~~~~~~~~l~~eDs-~~gi~aa~~ag~~~~~~ 140 (149)
..+|+|.+...+. .++++++|++|.|+ .|++.+|++||+.++.+
T Consensus 174 ~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v 220 (250)
T 2c4n_A 174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILV 220 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEE
T ss_pred eCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEE
Confidence 4578886655554 66888999999999 69999999999997764
No 106
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=99.51 E-value=1.3e-13 Score=106.10 Aligned_cols=56 Identities=18% Similarity=0.116 Sum_probs=43.6
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC---CchHHHHHHHHHcC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS---PAPDIAKTFLHKLG 87 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~---~~~~i~~~~l~~~g 87 (149)
++|+|+||+||||+++ + .+.|++.++|++++++|++++++||+ +... +...++.+|
T Consensus 7 ~~kli~~DlDGTLl~~------~----~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~-~~~~l~~lg 65 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKS------V----TPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRI-LLERLRSFG 65 (268)
T ss_dssp CCSEEEEECBTTTEET------T----EECHHHHHHHHHHHHTTCEEEEEECCSSSCHHH-HHHHHHHTT
T ss_pred cCCEEEEcCcCcEECC------C----EeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHH-HHHHHHHCC
Confidence 4899999999999983 1 36789999999999999999999994 4343 344444443
No 107
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=99.49 E-value=1.1e-13 Score=106.82 Aligned_cols=57 Identities=21% Similarity=0.332 Sum_probs=44.0
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC---CchHHHHHHHHHcCC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS---PAPDIAKTFLHKLGI 88 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~---~~~~i~~~~l~~~gl 88 (149)
++|+|+||+||||+++ + ...|++.++|++++++|++++++||+ +... +...++.+|+
T Consensus 4 ~~kli~~DlDGTLl~~------~----~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~-~~~~l~~lg~ 63 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKG------K----SRIPAGERFIERLQEKGIPYMLVTNNTTRTPES-VQEMLRGFNV 63 (264)
T ss_dssp CCCEEEECCBTTTEET------T----EECHHHHHHHHHHHHHTCCEEEEECCCSSCHHH-HHHHHHTTTC
T ss_pred CCCEEEEeCCCceEeC------C----EECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHH-HHHHHHHCCC
Confidence 4899999999999983 2 23389999999999999999999954 4444 3555555544
No 108
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.49 E-value=1e-13 Score=106.81 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=44.3
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC---CchHHHHHHHHHcCC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS---PAPDIAKTFLHKLGI 88 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~---~~~~i~~~~l~~~gl 88 (149)
++|+|+||+||||+++ . .+.|++.++|++|+++|++++++||+ +... +...++.+|+
T Consensus 5 ~~kli~~DlDGTLl~~------~----~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~-~~~~l~~lg~ 64 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNG------T----EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQ-VADKLVSFDI 64 (266)
T ss_dssp CCSEEEEECSSSTTCH------H----HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHH-HHHHHHHTTC
T ss_pred cCCEEEEeCcCceEeC------C----EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHH-HHHHHHHcCC
Confidence 4899999999999983 1 35689999999999999999999994 4344 3445555544
No 109
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.48 E-value=4.7e-15 Score=110.54 Aligned_cols=114 Identities=13% Similarity=-0.008 Sum_probs=87.3
Q ss_pred CccEEEEecCCcccccccccccc--------------CCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYE--------------DEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~--------------~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
..+++++|+|+||+++....... ...+..+||+.++|+++++. ++++|+|++++.. ++.+++.+
T Consensus 14 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~-a~~vl~~l 91 (181)
T 2ght_A 14 DKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKY-ADPVADLL 91 (181)
T ss_dssp TSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHH-HHHHHHHH
T ss_pred CCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHH-HHHHHHHH
Confidence 45789999999999852110000 01256899999999999998 9999999999998 89999999
Q ss_pred CCCCCcccccccC---CChhHHHHHH----hhCCCcceEEEeehHhHHHHHHHhCCchh
Q 032013 87 GIHSMFVPMVRLS---CCIMCIIFFL----FFFSISAFILFVDLFCFMYAAAYVGCDLY 138 (149)
Q Consensus 87 gl~~~f~~~~~~~---p~p~~~i~~~----~~~~~~~~l~~eDs~~gi~aa~~ag~~~~ 138 (149)
+...+|...-... ..+ ..|++ .+.++++|+++|||+.++.++.++|+++.
T Consensus 92 d~~~~f~~~~~rd~~~~~k--~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 92 DKWGAFRARLFRESCVFHR--GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp CTTCCEEEEECGGGSEEET--TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCC
T ss_pred CCCCcEEEEEeccCceecC--CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEec
Confidence 9988887652110 011 23433 56777999999999999999999999864
No 110
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=99.45 E-value=5.9e-13 Score=101.24 Aligned_cols=58 Identities=14% Similarity=0.119 Sum_probs=49.2
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
+|+++||+||||++. +. .+.+.+.++|++++++|++++++||++... +..+++.+|+.
T Consensus 3 ~kli~~DlDGTLl~~------~~---~i~~~~~~al~~l~~~G~~v~i~TGR~~~~-~~~~~~~l~~~ 60 (231)
T 1wr8_A 3 IKAISIDIDGTITYP------NR---MIHEKALEAIRRAESLGIPIMLVTGNTVQF-AEAASILIGTS 60 (231)
T ss_dssp CCEEEEESTTTTBCT------TS---CBCHHHHHHHHHHHHTTCCEEEECSSCHHH-HHHHHHHHTCC
T ss_pred eeEEEEECCCCCCCC------CC---cCCHHHHHHHHHHHHCCCEEEEEcCCChhH-HHHHHHHcCCC
Confidence 789999999999983 22 477899999999999999999999999887 57777766653
No 111
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=99.45 E-value=9.3e-14 Score=107.37 Aligned_cols=46 Identities=26% Similarity=0.418 Sum_probs=39.0
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
+++++||+||||+++ . ...|++.++|++++++|++++++||++...
T Consensus 1 ik~i~~D~DGtL~~~------~----~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~ 46 (263)
T 1zjj_A 1 MVAIIFDMDGVLYRG------N----RAIPGVRELIEFLKERGIPFAFLTNNSTKT 46 (263)
T ss_dssp CEEEEEECBTTTEET------T----EECTTHHHHHHHHHHHTCCEEEEESCCSSC
T ss_pred CeEEEEeCcCceEeC------C----EeCccHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 478999999999973 1 245899999999999999999999987643
No 112
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.45 E-value=1.8e-13 Score=107.51 Aligned_cols=106 Identities=13% Similarity=0.001 Sum_probs=85.6
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~ 101 (149)
.+.+++|.|+++... -....+++||+.++|+.|+++|++++|+||++... ++..++.+|+..+|+.+. |.
T Consensus 143 ~~~i~~~~d~~~~~~------~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~l~~~gl~~~f~~i~---~~ 212 (287)
T 3a1c_A 143 KTAVIVARNGRVEGI------IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS-AEAISRELNLDLVIAEVL---PH 212 (287)
T ss_dssp CEEEEEEETTEEEEE------EEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCSEEECSCC---TT
T ss_pred CeEEEEEECCEEEEE------EEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHhCCceeeeecC---hH
Confidence 578999999998762 11124689999999999999999999999999988 799999999998887653 34
Q ss_pred hhHHHHHHhhCCCcceEEEeehHhHHHHHHHhCCchh
Q 032013 102 IMCIIFFLFFFSISAFILFVDLFCFMYAAAYVGCDLY 138 (149)
Q Consensus 102 p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag~~~~ 138 (149)
+.....-..+.. ++|++++||.+++.+|++||+.+.
T Consensus 213 ~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~ 248 (287)
T 3a1c_A 213 QKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIA 248 (287)
T ss_dssp CHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEE
T ss_pred HHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEE
Confidence 422322335666 899999999999999999999743
No 113
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=99.44 E-value=5.8e-13 Score=105.12 Aligned_cols=42 Identities=33% Similarity=0.413 Sum_probs=37.5
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS 73 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~ 73 (149)
+++|+||+||||++. . .+.|++.+++++|+++|++++++||+
T Consensus 21 ~k~i~~D~DGTL~~~------~----~~~~~~~~~l~~l~~~g~~~~~~Tn~ 62 (306)
T 2oyc_A 21 AQGVLFDCDGVLWNG------E----RAVPGAPELLERLARAGKAALFVSNN 62 (306)
T ss_dssp CSEEEECSBTTTEET------T----EECTTHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEECCCCcEecC------C----ccCcCHHHHHHHHHHCCCeEEEEECC
Confidence 789999999999973 1 47789999999999999999999974
No 114
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.41 E-value=5.1e-13 Score=102.01 Aligned_cols=61 Identities=23% Similarity=0.275 Sum_probs=53.1
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~ 91 (149)
++|++++|+||||++. +. .+.|.+.++|++|+++|++++++||++... +...++.+++..+
T Consensus 4 m~kli~~DlDGTLl~~------~~---~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~-~~~~~~~l~~~~~ 64 (227)
T 1l6r_A 4 MIRLAAIDVDGNLTDR------DR---LISTKAIESIRSAEKKGLTVSLLSGNVIPV-VYALKIFLGINGP 64 (227)
T ss_dssp CCCEEEEEHHHHSBCT------TS---CBCHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCCSC
T ss_pred ceEEEEEECCCCCcCC------CC---cCCHHHHHHHHHHHHCCCEEEEECCCCcHH-HHHHHHHhCCCCe
Confidence 3789999999999983 22 477899999999999999999999999988 7899999888653
No 115
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=99.39 E-value=9.4e-13 Score=101.14 Aligned_cols=57 Identities=19% Similarity=0.179 Sum_probs=45.6
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~g 87 (149)
++|+|+||+||||++. .. .+.+.+.++|++++++|++++++||++... +...++.++
T Consensus 4 M~kli~fDlDGTLl~~------~~---~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~~~ 60 (274)
T 3fzq_A 4 LYKLLILDIDGTLRDE------VY---GIPESAKHAIRLCQKNHCSVVICTGRSMGT-IQDDVLSLG 60 (274)
T ss_dssp CCCEEEECSBTTTBBT------TT---BCCHHHHHHHHHHHHTTCEEEEECSSCTTT-SCHHHHTTC
T ss_pred cceEEEEECCCCCCCC------CC---cCCHHHHHHHHHHHHCCCEEEEEeCCChHH-HHHHHHHcC
Confidence 4899999999999983 22 477889999999999999999999998655 344444433
No 116
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.35 E-value=4.1e-12 Score=98.69 Aligned_cols=58 Identities=21% Similarity=0.304 Sum_probs=51.1
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
+|+|+||+||||++. .. .+.+.+.++|++++++|++++++||++... +..+++.+++.
T Consensus 6 ~kli~fDlDGTLl~~------~~---~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~~~~~ 63 (290)
T 3dnp_A 6 KQLLALNIDGALLRS------NG---KIHQATKDAIEYVKKKGIYVTLVTNRHFRS-AQKIAKSLKLD 63 (290)
T ss_dssp CCEEEECCCCCCSCT------TS---CCCHHHHHHHHHHHHTTCEEEEBCSSCHHH-HHHHHHHTTCC
T ss_pred ceEEEEcCCCCCCCC------CC---ccCHHHHHHHHHHHHCCCEEEEECCCChHH-HHHHHHHcCCC
Confidence 799999999999983 22 477899999999999999999999999988 68888888775
No 117
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=99.34 E-value=5.2e-12 Score=97.63 Aligned_cols=57 Identities=26% Similarity=0.367 Sum_probs=50.3
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGI 88 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl 88 (149)
+|+|+||+||||++. .. .+.+.+.++|++++++|++++++||++... +...++.+++
T Consensus 5 ~kli~fDlDGTLl~~------~~---~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~ 61 (279)
T 4dw8_A 5 YKLIVLDLDGTLTNS------KK---EISSRNRETLIRIQEQGIRLVLASGRPTYG-IVPLANELRM 61 (279)
T ss_dssp CCEEEECCCCCCSCT------TS---CCCHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTG
T ss_pred ceEEEEeCCCCCCCC------CC---ccCHHHHHHHHHHHHCCCEEEEEcCCChHH-HHHHHHHhCC
Confidence 799999999999983 32 477899999999999999999999999988 6888888776
No 118
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=99.33 E-value=3.2e-12 Score=98.81 Aligned_cols=58 Identities=24% Similarity=0.393 Sum_probs=42.9
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
+|+|+||+||||++. .. .+.+.+.++|++++++|++++++||++... +..+++.+++.
T Consensus 5 ~kli~~DlDGTLl~~------~~---~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~ 62 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNE------KN---ELAQATIDAVQAAKAQGIKVVLCTGRPLTG-VQPYLDAMDID 62 (279)
T ss_dssp CCEEEECC--------------------CHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCC
T ss_pred eEEEEEcCcCCCCCC------CC---cCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHcCCC
Confidence 799999999999983 22 477899999999999999999999999988 68888887764
No 119
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=99.25 E-value=1.2e-12 Score=102.04 Aligned_cols=90 Identities=12% Similarity=0.062 Sum_probs=70.3
Q ss_pred cCccHHHHHHHHHHC-CceEEEEeCC---------------------CchHHHHHHHHHcCCCCCcccc-----------
Q 032013 49 LYPHAKGILEALKEK-GIHVAVASRS---------------------PAPDIAKTFLHKLGIHSMFVPM----------- 95 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~-Gi~i~IaT~~---------------------~~~~i~~~~l~~~gl~~~f~~~----------- 95 (149)
..+++.++++.++++ |+++++.|+. .... +...++..|+..+|...
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLA-IEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHH-HHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHH-HHHHHHHcCCCEEEEEccccccCCCCce
Confidence 346788999999998 9999999987 4455 57888888887655432
Q ss_pred -----cccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 96 -----VRLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 96 -----~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
...+++|.+..++. .++++++|++|.||.|++.++++||+.+.+
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~ 252 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL 252 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE
Confidence 23366776666665 567789999999999999999999987665
No 120
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=99.16 E-value=4.3e-11 Score=94.11 Aligned_cols=113 Identities=12% Similarity=-0.004 Sum_probs=80.1
Q ss_pred cEEEEecCCccccccccc----------cc-------cCCCCccCccHHHHHHHHHHCCceEEEEeCCCch----HHHHH
Q 032013 23 RLVVFDLDYTLWPFYCEC----------CY-------EDEIPYLYPHAKGILEALKEKGIHVAVASRSPAP----DIAKT 81 (149)
Q Consensus 23 k~vifDlDGTLld~~~~~----------~~-------~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~----~i~~~ 81 (149)
.+|+||+||||+++..+. +. .....+++||+.++|+.|+++|++++++||++.. . +..
T Consensus 59 ~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~-T~~ 137 (260)
T 3pct_A 59 KAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAG-TVD 137 (260)
T ss_dssp EEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHH-HHH
T ss_pred CEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHH-HHH
Confidence 499999999999985442 11 2234689999999999999999999999999754 5 789
Q ss_pred HHHHcCCCCCcc--ccc-ccCCChhHHHHHH-hhCCCcceEEEeehHhHHHH--------HHHhCCch
Q 032013 82 FLHKLGIHSMFV--PMV-RLSCCIMCIIFFL-FFFSISAFILFVDLFCFMYA--------AAYVGCDL 137 (149)
Q Consensus 82 ~l~~~gl~~~f~--~~~-~~~p~p~~~i~~~-~~~~~~~~l~~eDs~~gi~a--------a~~ag~~~ 137 (149)
.|+.+|+..+++ ... ..++...+ .+.+ ...+..-++.+-|+.+.+.+ +++|+.+.
T Consensus 138 ~L~~lGi~~~~~~~Lilr~~~~~K~~-~r~~L~~~gy~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~ 204 (260)
T 3pct_A 138 DMKRLGFTGVNDKTLLLKKDKSNKSV-RFKQVEDMGYDIVLFVGDNLNDFGDATYKKSNAERRDFVAK 204 (260)
T ss_dssp HHHHHTCCCCSTTTEEEESSCSSSHH-HHHHHHTTTCEEEEEEESSGGGGCGGGTTCCHHHHHHHHHH
T ss_pred HHHHcCcCccccceeEecCCCCChHH-HHHHHHhcCCCEEEEECCChHHcCcccccCCHHHHHHHHHH
Confidence 999999987653 121 12333322 3333 22244557888899999987 55655444
No 121
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.15 E-value=5.5e-11 Score=91.31 Aligned_cols=49 Identities=20% Similarity=0.389 Sum_probs=41.2
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCch
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAP 76 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~ 76 (149)
.++|+|+||+||||++. .. ..+.+.+.++|++++++|++++++||++..
T Consensus 10 ~miKli~~DlDGTLl~~-----~~---~~i~~~~~~al~~l~~~G~~~~iaTGR~~~ 58 (268)
T 3r4c_A 10 HMIKVLLLDVDGTLLSF-----ET---HKVSQSSIDALKKVHDSGIKIVIATGRAAS 58 (268)
T ss_dssp SCCCEEEECSBTTTBCT-----TT---CSCCHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CceEEEEEeCCCCCcCC-----CC---CcCCHHHHHHHHHHHHCCCEEEEEcCCChH
Confidence 35899999999999982 12 147788999999999999999999999743
No 122
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=99.14 E-value=7.9e-11 Score=91.81 Aligned_cols=62 Identities=32% Similarity=0.412 Sum_probs=53.3
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~ 91 (149)
.++|+++||+||||++. .. .+.+.+.++|++++++|++++++||++... +..+++.+++..+
T Consensus 19 ~~~kli~~DlDGTLl~~------~~---~i~~~~~~al~~l~~~G~~v~iaTGR~~~~-~~~~~~~l~~~~~ 80 (285)
T 3pgv_A 19 GMYQVVASDLDGTLLSP------DH---FLTPYAKETLKLLTARGINFVFATGRHYID-VGQIRDNLGIRSY 80 (285)
T ss_dssp --CCEEEEECCCCCSCT------TS---CCCHHHHHHHHHHHTTTCEEEEECSSCGGG-GHHHHHHHCSCCE
T ss_pred CcceEEEEeCcCCCCCC------CC---cCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHhcCCCcc
Confidence 34899999999999983 32 477899999999999999999999999999 6999999998754
No 123
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=99.13 E-value=3e-11 Score=95.09 Aligned_cols=109 Identities=11% Similarity=-0.059 Sum_probs=76.2
Q ss_pred CCccEEEEecCCccccccccc----------cc-------cCCCCccCccHHHHHHHHHHCCceEEEEeCCCch---HHH
Q 032013 20 NLPRLVVFDLDYTLWPFYCEC----------CY-------EDEIPYLYPHAKGILEALKEKGIHVAVASRSPAP---DIA 79 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~----------~~-------~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~---~i~ 79 (149)
..+.+|+||+||||+++..++ +. .....+++||+.++|+.|+++|++++++||++.. ..+
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T 135 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGT 135 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHH
Confidence 346799999999999975431 11 1234689999999999999999999999999763 227
Q ss_pred HHHHHHcCCCCCcc--cccc-cCCChhHHHHHH-hhCCCcceEEEeehHhHHHH
Q 032013 80 KTFLHKLGIHSMFV--PMVR-LSCCIMCIIFFL-FFFSISAFILFVDLFCFMYA 129 (149)
Q Consensus 80 ~~~l~~~gl~~~f~--~~~~-~~p~p~~~i~~~-~~~~~~~~l~~eDs~~gi~a 129 (149)
...|+.+|+..+++ .... ..+... ..+.+ ...+-..++.+-|+.+.+.+
T Consensus 136 ~~~L~~lGi~~~~~~~Lilr~~~~~K~-~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 136 IDDMKRLGFNGVEESAFYLKKDKSAKA-ARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp HHHHHHHTCSCCSGGGEEEESSCSCCH-HHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred HHHHHHcCcCcccccceeccCCCCChH-HHHHHHHhcCCCEEEEECCChHHhcc
Confidence 88999999987652 2211 122222 23333 22233457888899999987
No 124
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=99.12 E-value=1.6e-10 Score=83.21 Aligned_cols=95 Identities=15% Similarity=-0.009 Sum_probs=61.7
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCC---chHHHHHHHHHcCCCCCccccccc
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP---APDIAKTFLHKLGIHSMFVPMVRL 98 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~---~~~i~~~~l~~~gl~~~f~~~~~~ 98 (149)
+++|+||+||||+++ ...+-....|++.++|+.|+++|++++++||++ ... +...++..|+..++. .
T Consensus 3 ~k~i~~DlDGTL~~~-----~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~-~~~~l~~~gi~~~~I--~-- 72 (142)
T 2obb_A 3 AMTIAVDFDGTIVEH-----RYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDE-AIEWCRARGLEFYAA--N-- 72 (142)
T ss_dssp CCEEEECCBTTTBCS-----CTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHH-HHHHHHTTTCCCSEE--S--
T ss_pred CeEEEEECcCCCCCC-----CCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHH-HHHHHHHcCCCeEEE--E--
Confidence 678999999999984 111112456899999999999999999999997 345 567778888754322 2
Q ss_pred CCChhHHHHHH-hhCCCcceEEEeehHhH
Q 032013 99 SCCIMCIIFFL-FFFSISAFILFVDLFCF 126 (149)
Q Consensus 99 ~p~p~~~i~~~-~~~~~~~~l~~eDs~~g 126 (149)
.-+|...++.. ..-.+..-+++||-..|
T Consensus 73 ~n~P~~~~~~~~~~rK~~~~~fIDDR~~~ 101 (142)
T 2obb_A 73 KDYPEEERDHQGFSRKLKADLFIDDRNVG 101 (142)
T ss_dssp SSSTTC---CCSCCSSCCCSEEECTTSTT
T ss_pred cCCchhhhcchhhcCCcCCCEEeeccccC
Confidence 23332123211 11223455778887654
No 125
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=99.10 E-value=2e-10 Score=89.64 Aligned_cols=65 Identities=26% Similarity=0.334 Sum_probs=54.0
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC-Cccccc
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS-MFVPMV 96 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~-~f~~~~ 96 (149)
+++|++|+||||++. +. ...+.+.++|++|+++|++++++|||+... +..+++.+++.. ++.+.+
T Consensus 9 ~~li~~DlDGTLl~~------~~---~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~~~~~I~~N 74 (275)
T 1xvi_A 9 PLLVFSDLDGTLLDS------HS---YDWQPAAPWLTRLREANVPVILCSSKTSAE-MLYLQKTLGLQGLPLIAEN 74 (275)
T ss_dssp CEEEEEECTTTTSCS------SC---CSCCTTHHHHHHHHHTTCCEEEECSSCHHH-HHHHHHHTTCTTSCEEEGG
T ss_pred ceEEEEeCCCCCCCC------CC---cCCHHHHHHHHHHHHCCCeEEEEcCCCHHH-HHHHHHHcCCCCCeEEEeC
Confidence 789999999999983 22 345678999999999999999999999998 799999999875 454443
No 126
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=99.09 E-value=1.8e-10 Score=89.89 Aligned_cols=60 Identities=22% Similarity=0.428 Sum_probs=52.7
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~ 90 (149)
++|+++||+||||++. +. .+.+.+.++|++++++|++++++|||+... +..+++.+++..
T Consensus 4 m~kli~~DlDGTLl~~------~~---~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~-~~~~~~~l~l~~ 63 (282)
T 1rkq_A 4 AIKLIAIDMDGTLLLP------DH---TISPAVKNAIAAARARGVNVVLTTGRPYAG-VHNYLKELHMEQ 63 (282)
T ss_dssp CCCEEEECCCCCCSCT------TS---CCCHHHHHHHHHHHHTTCEEEEECSSCGGG-THHHHHHTTCCS
T ss_pred cceEEEEeCCCCCCCC------CC---cCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHhCCCC
Confidence 3799999999999983 22 477899999999999999999999999998 689999998864
No 127
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=99.08 E-value=1.2e-10 Score=92.13 Aligned_cols=59 Identities=17% Similarity=0.203 Sum_probs=51.3
Q ss_pred CccEEEEecCCccccccccccc-cCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHH--HHcC-CC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCY-EDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFL--HKLG-IH 89 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~-~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l--~~~g-l~ 89 (149)
++|+|+||+||||++ . +. .+.+.+.++|++|+++|++++++|||+... +..++ +.++ +.
T Consensus 26 ~ikli~~DlDGTLl~------~~~~---~is~~~~~al~~l~~~Gi~v~iaTGR~~~~-~~~~~~~~~l~~~~ 88 (301)
T 2b30_A 26 DIKLLLIDFDGTLFV------DKDI---KVPSENIDAIKEAIEKGYMVSICTGRSKVG-ILSAFGEENLKKMN 88 (301)
T ss_dssp CCCEEEEETBTTTBC------CTTT---CSCHHHHHHHHHHHHHTCEEEEECSSCHHH-HHHHHCHHHHHHHT
T ss_pred cccEEEEECCCCCcC------CCCC---ccCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHhhHHhhcccc
Confidence 379999999999998 3 22 477889999999999999999999999988 68888 8887 65
No 128
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=99.07 E-value=2.7e-10 Score=88.19 Aligned_cols=58 Identities=22% Similarity=0.099 Sum_probs=50.8
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~ 90 (149)
+|+++||+||||++. ++ .+.+.+.++|++ +++|++++++|||+... +..+++.+++..
T Consensus 2 ikli~~DlDGTLl~~------~~---~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~-~~~~~~~l~~~~ 59 (268)
T 1nf2_A 2 YRVFVFDLDGTLLND------NL---EISEKDRRNIEK-LSRKCYVVFASGRMLVS-TLNVEKKYFKRT 59 (268)
T ss_dssp BCEEEEECCCCCSCT------TS---CCCHHHHHHHHH-HTTTSEEEEECSSCHHH-HHHHHHHHSSSC
T ss_pred ccEEEEeCCCcCCCC------CC---ccCHHHHHHHHH-HhCCCEEEEECCCChHH-HHHHHHHhCCCC
Confidence 789999999999983 22 467889999999 99999999999999998 689999999865
No 129
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=99.06 E-value=2.7e-10 Score=88.96 Aligned_cols=61 Identities=25% Similarity=0.335 Sum_probs=52.0
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~ 91 (149)
++|+|+||+||||++. ++ .+.+...+++++++++|++++++||++... +...++.+++..+
T Consensus 3 mikli~~DlDGTLl~~------~~---~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~~~ 63 (288)
T 1nrw_A 3 AMKLIAIDLDGTLLNS------KH---QVSLENENALRQAQRDGIEVVVSTGRAHFD-VMSIFEPLGIKTW 63 (288)
T ss_dssp -CCEEEEECCCCCSCT------TS---CCCHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHGGGTCCCE
T ss_pred ceEEEEEeCCCCCCCC------CC---ccCHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCCCc
Confidence 4799999999999983 22 467888999999999999999999999988 6888888887653
No 130
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=99.03 E-value=2.2e-10 Score=89.33 Aligned_cols=62 Identities=19% Similarity=0.231 Sum_probs=52.2
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~ 90 (149)
.++|+|+||+||||++. +. ..+.+.+.++|++++++|++++++||++... +..+++.++...
T Consensus 19 ~~~kli~~DlDGTLl~~------~~--~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~-~~~~~~~l~~~~ 80 (283)
T 3dao_A 19 GMIKLIATDIDGTLVKD------GS--LLIDPEYMSVIDRLIDKGIIFVVCSGRQFSS-EFKLFAPIKHKL 80 (283)
T ss_dssp CCCCEEEECCBTTTBST------TC--SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHTGGGGGGC
T ss_pred cCceEEEEeCcCCCCCC------CC--CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHcCCCc
Confidence 44899999999999983 22 1477899999999999999999999999988 688888877653
No 131
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=99.00 E-value=7e-10 Score=84.88 Aligned_cols=59 Identities=29% Similarity=0.338 Sum_probs=50.8
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~ 90 (149)
+|+|+||+||||++. ++ .+.+.+.++|++++++|++++++||++... +...++.+++..
T Consensus 3 ~kli~~DlDGTLl~~------~~---~i~~~~~~al~~l~~~G~~~~~aTGR~~~~-~~~~~~~l~~~~ 61 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDE------QK---QLPLSTIEAVRRLKQSGVYVAIATGRAPFM-FEHVRKQLGIDS 61 (258)
T ss_dssp CCEEEECTBTTTBCT------TS---CCCHHHHHHHHHHHHTTCEEEEECSSCGGG-SHHHHHHHTCCC
T ss_pred ceEEEEeCCCCCcCC------CC---ccCHHHHHHHHHHHHCCCEEEEECCCChHH-HHHHHHhcCCCE
Confidence 689999999999983 22 467889999999999999999999999988 688888887654
No 132
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=99.00 E-value=5.2e-10 Score=85.95 Aligned_cols=63 Identities=25% Similarity=0.331 Sum_probs=51.7
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV 96 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~ 96 (149)
+|+|+||+||||+ . .. .+ +.+.++|++|+++|++++++||++... +...++.+++..++.+.+
T Consensus 2 ikli~~DlDGTLl-~-----~~----~~-~~~~~~l~~l~~~g~~~~i~Tgr~~~~-~~~~~~~~~~~~~~I~~N 64 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P-----GY----EP-DPAKPIIEELKDMGFEIIFNSSKTRAE-QEYYRKELEVETPFISEN 64 (249)
T ss_dssp EEEEEECCSTTTC-T-----TS----CS-GGGHHHHHHHHHTTEEEEEBCSSCHHH-HHHHHHHHTCCSCEEETT
T ss_pred ccEEEEeCCCCcc-C-----CC----Cc-HHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCCccEEEeC
Confidence 6899999999999 4 11 12 458899999999999999999999988 688999999875554443
No 133
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=98.99 E-value=2.1e-10 Score=88.83 Aligned_cols=62 Identities=24% Similarity=0.258 Sum_probs=49.5
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccH-HHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHA-KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~-~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
+|+++||+||||++. ++ .+.+.. .++|++|+++|++++++|||+... +...++.+++..++.
T Consensus 3 ~kli~~DlDGTLl~~------~~---~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~~~~I 65 (271)
T 1rlm_A 3 VKVIVTDMDGTFLND------AK---TYNQPRFMAQYQELKKRGIKFVVASGNQYYQ-LISFFPELKDEISFV 65 (271)
T ss_dssp CCEEEECCCCCCSCT------TS---CCCHHHHHHHHHHHHHHTCEEEEECSSCHHH-HGGGCTTTTTTSEEE
T ss_pred ccEEEEeCCCCCCCC------CC---cCCHHHHHHHHHHHHHCCCEEEEEeCCcHHH-HHHHHHhcCCCCEEE
Confidence 689999999999983 22 366674 899999999999999999999888 577776666544443
No 134
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=98.98 E-value=5.3e-11 Score=90.52 Aligned_cols=113 Identities=12% Similarity=-0.096 Sum_probs=81.5
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC-Cccccc--
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS-MFVPMV-- 96 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~-~f~~~~-- 96 (149)
..+.++++|+|+||+.+.... ..+-.+...||+.++|+++. +++.++|.|++.... ++.+++.++... +|...-
T Consensus 32 ~~~~tLVLDLDeTLvh~~~~~-~~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~~y-a~~vl~~LDp~~~~f~~rl~R 108 (204)
T 3qle_A 32 QRPLTLVITLEDFLVHSEWSQ-KHGWRTAKRPGADYFLGYLS-QYYEIVLFSSNYMMY-SDKIAEKLDPIHAFVSYNLFK 108 (204)
T ss_dssp CCSEEEEEECBTTTEEEEEET-TTEEEEEECTTHHHHHHHHT-TTEEEEEECSSCHHH-HHHHHHHTSTTCSSEEEEECG
T ss_pred CCCeEEEEeccccEEeeeccc-cCceeEEeCCCHHHHHHHHH-hCCEEEEEcCCcHHH-HHHHHHHhCCCCCeEEEEEEe
Confidence 346799999999999852110 01113678999999999998 679999999999998 899999999864 666421
Q ss_pred --ccCCChhHHHHHH----hhCCCcceEEEeehHhHHHHHHHhCCchh
Q 032013 97 --RLSCCIMCIIFFL----FFFSISAFILFVDLFCFMYAAAYVGCDLY 138 (149)
Q Consensus 97 --~~~p~p~~~i~~~----~~~~~~~~l~~eDs~~gi~aa~~ag~~~~ 138 (149)
+.. .+ ..|.+ ++.++++|+++|||+.+.......|+++.
T Consensus 109 ~~c~~-~~--g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~ 153 (204)
T 3qle_A 109 EHCVY-KD--GVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPME 153 (204)
T ss_dssp GGSEE-ET--TEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECC
T ss_pred cceeE-EC--CeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEee
Confidence 110 11 22433 45667999999999998876666666543
No 135
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=98.52 E-value=5.9e-11 Score=92.32 Aligned_cols=89 Identities=17% Similarity=0.129 Sum_probs=72.9
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehHhH
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLFCF 126 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~g 126 (149)
.+++||+.++|++|+++|++++++||++... ++.+++++|+..+|+... |.+...+.-..+..+++|+.+.|+.|+
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~~~~~gl~~~f~~~~---p~~k~~~~~~l~~~~~~~~~VGD~~~D 210 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDK-VKELSKELNIQEYYSNLS---PEDKVRIIEKLKQNGNKVLMIGDGVND 210 (263)
Confidence 4689999999999999999999999999988 799999999998887653 333212222255677899999999999
Q ss_pred HHHHHHhCCchhh
Q 032013 127 MYAAAYVGCDLYV 139 (149)
Q Consensus 127 i~aa~~ag~~~~~ 139 (149)
+.+|++||+.+.+
T Consensus 211 ~~aa~~Agv~va~ 223 (263)
T 2yj3_A 211 AAALALADVSVAM 223 (263)
Confidence 9999999976543
No 136
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=98.96 E-value=2.5e-09 Score=74.76 Aligned_cols=52 Identities=13% Similarity=0.058 Sum_probs=40.3
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCch
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAP 76 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~ 76 (149)
+|+++||+||||++..... -....+.|++.+++++|+++|++++++||++..
T Consensus 1 ik~i~~DlDGTL~~~~~~~---~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSD---YRNVLPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CCEEEECSTTTTBCCCCSC---GGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCEEEEecCCCCCCCCCCc---cccCCCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 4789999999999841100 001246789999999999999999999999863
No 137
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.92 E-value=5.9e-10 Score=87.69 Aligned_cols=59 Identities=20% Similarity=0.244 Sum_probs=49.1
Q ss_pred CccEEEEecCCccccccccccccCCCCccCcc-HHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPH-AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg-~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
++|+|+||+||||++. .. .+.+. +.++|++++++|++++++||++... +...++.++..
T Consensus 36 ~iKli~fDlDGTLld~------~~---~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~ 95 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNS------KG---SYDHNRFQRILKQLQERDIRFVVASSNPYRQ-LREHFPDCHEQ 95 (304)
T ss_dssp CCSEEEECCCCCCSCT------TS---CCCHHHHHHHHHHHHHTTCEEEEECSSCHHH-HHTTCTTTGGG
T ss_pred eeEEEEEeCCCCCCCC------CC---ccCHHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHhCCC
Confidence 4899999999999983 22 35666 7899999999999999999999888 67777766653
No 138
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=98.87 E-value=2.8e-09 Score=82.25 Aligned_cols=52 Identities=21% Similarity=0.232 Sum_probs=43.8
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHH
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFL 83 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l 83 (149)
+|+++||+||||++. ++ .+.+.+.++|++|+++|++++++|||+... +...+
T Consensus 4 ~kli~~DlDGTLl~~------~~---~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~-~~~~l 55 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPP------RL---CQTDEMRALIKRARGAGFCVGTVGGSDFAK-QVEQL 55 (246)
T ss_dssp SEEEEECSBTTTBST------TS---CCCHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHH
T ss_pred ceEEEEeCcCCcCCC------CC---ccCHHHHHHHHHHHHCCCEEEEECCCCHHH-HHHHh
Confidence 789999999999983 32 477899999999999999999999999776 34433
No 139
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=98.86 E-value=1.7e-10 Score=89.64 Aligned_cols=88 Identities=13% Similarity=0.108 Sum_probs=64.0
Q ss_pred cHHHHHHHHHHCCceEEEEeCCCchHHH--H--HHHHHcCCCCCcccc------cccCCChhHHHHHH--h----hCCCc
Q 032013 52 HAKGILEALKEKGIHVAVASRSPAPDIA--K--TFLHKLGIHSMFVPM------VRLSCCIMCIIFFL--F----FFSIS 115 (149)
Q Consensus 52 g~~e~L~~Lk~~Gi~i~IaT~~~~~~i~--~--~~l~~~gl~~~f~~~------~~~~p~p~~~i~~~--~----~~~~~ 115 (149)
...++++.|+++|++ +|+||++... . . ..++..++..+|+.+ ...||+|..+..+. . +++|+
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~-~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~ 226 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTY-PLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKR 226 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEE-ECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccc-cCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence 556777889999999 9999997654 3 2 112344555555543 24588884444433 5 77889
Q ss_pred ceEEEeehH-hHHHHHHHhCCchhhhh
Q 032013 116 AFILFVDLF-CFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 116 ~~l~~eDs~-~gi~aa~~ag~~~~~~~ 141 (149)
+|+.+.|++ ++|.+|++|||+++.+.
T Consensus 227 ~~~~VGD~~~~Di~~A~~aG~~~i~v~ 253 (284)
T 2hx1_A 227 EILMVGDTLHTDILGGNKFGLDTALVL 253 (284)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 999999995 99999999999998764
No 140
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=98.86 E-value=4.5e-09 Score=81.52 Aligned_cols=61 Identities=20% Similarity=0.246 Sum_probs=50.7
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeC---CCchHHHHHHHHHcCCC-CCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASR---SPAPDIAKTFLHKLGIH-SMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~---~~~~~i~~~~l~~~gl~-~~f 92 (149)
++++++||+||||+++ ..+.|++.++|++++++|++++++|| ++... ....++.+|+. ..+
T Consensus 13 ~~k~i~~D~DGtL~~~----------~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~-~~~~l~~lg~~~~~~ 77 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTY----------NGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQ-LADSYHKLGLFSITA 77 (284)
T ss_dssp GCSEEEECSBTTTEET----------TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHH-HHHHHHHTTCTTCCG
T ss_pred cCCEEEEcCcCCcCcC----------CeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHH-HHHHHHHCCcCCCCH
Confidence 4899999999999983 13678999999999999999999998 45556 57888889987 444
No 141
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=98.82 E-value=2.8e-09 Score=81.55 Aligned_cols=59 Identities=22% Similarity=0.259 Sum_probs=46.0
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
++++++|+||||++... ......+.+.+.++|++|+++| +++++|||+... +...++.+
T Consensus 1 ikli~~DlDGTLl~~~~----~~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~-~~~~~~~l 59 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIM----NPEESYADAGLLSLISDLKERF-DTYIVTGRSPEE-ISRFLPLD 59 (239)
T ss_dssp -CEEEEECBTTTBCCCS----CGGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHH-HHHHSCSS
T ss_pred CeEEEEecCCCCcCCCC----CcccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHH-HHHHhccc
Confidence 47899999999998311 1111257789999999999999 999999999888 57776654
No 142
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=98.81 E-value=1.3e-08 Score=82.91 Aligned_cols=102 Identities=18% Similarity=0.105 Sum_probs=67.8
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCc---hHHHHHHHH-HcCCCCCcccc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA---PDIAKTFLH-KLGIHSMFVPM 95 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~---~~i~~~~l~-~~gl~~~f~~~ 95 (149)
.+.++++||+||||+++ ..+.||+.++|++|+++|++++++||++. .. ....+. .+|+. +...
T Consensus 11 ~~~~~~l~D~DGvl~~g----------~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~-~~~~l~~~lgi~--~~~~ 77 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRG----------KKPIAGASDALKLLNRNKIPYILLTNGGGFSERA-RTEFISSKLDVD--VSPL 77 (352)
T ss_dssp -CCEEEEECCBTTTEET----------TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHH-HHHHHHHHHTSC--CCGG
T ss_pred ccCCEEEEECCCeeEcC----------CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchH-HHHHHHHhcCCC--CChh
Confidence 34789999999999984 14789999999999999999999998863 34 344554 68885 3444
Q ss_pred cccCC-ChhHHHHHHhhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 96 VRLSC-CIMCIIFFLFFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 96 ~~~~p-~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
++..+ .++.. |+. ....+.+-=+..-......+|.+.++
T Consensus 78 ~i~ts~~~~~~-~~~----~~~~v~viG~~~l~~~l~~~G~~~v~ 117 (352)
T 3kc2_A 78 QIIQSHTPYKS-LVN----KYSRILAVGTPSVRGVAEGYGFQDVV 117 (352)
T ss_dssp GEECTTGGGGG-GTT----TCSEEEEESSTTHHHHHHHHTCSEEE
T ss_pred hEeehHHHHHH-HHh----cCCEEEEECCHHHHHHHHhCCCeEec
Confidence 44433 44322 322 22333333344445566777988774
No 143
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=98.78 E-value=8.5e-09 Score=79.13 Aligned_cols=56 Identities=27% Similarity=0.327 Sum_probs=45.7
Q ss_pred EEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccc
Q 032013 24 LVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVP 94 (149)
Q Consensus 24 ~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~ 94 (149)
+|+||+||||++. . .+.+.+.++|++++++|++++++||++... +. .+++..++..
T Consensus 2 li~~DlDGTLl~~------~----~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~-~~----~l~~~~~~i~ 57 (259)
T 3zx4_A 2 IVFTDLDGTLLDE------R----GELGPAREALERLRALGVPVVPVTAKTRKE-VE----ALGLEPPFIV 57 (259)
T ss_dssp EEEECCCCCCSCS------S----SSCSTTHHHHHHHHHTTCCEEEBCSSCHHH-HH----HTTCCSSEEE
T ss_pred EEEEeCCCCCcCC------C----cCCHHHHHHHHHHHHCCCeEEEEeCCCHHH-HH----HcCCCCcEEE
Confidence 6899999999983 2 366888999999999999999999999877 44 6776555433
No 144
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=98.75 E-value=2.5e-09 Score=82.09 Aligned_cols=55 Identities=29% Similarity=0.400 Sum_probs=45.0
Q ss_pred cEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcC
Q 032013 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (149)
Q Consensus 23 k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~g 87 (149)
|+++||+||||++. ++ ..+.+.+.++|++++++|++++++|||+ .. +...++.++
T Consensus 3 kli~~DlDGTLl~~------~~--~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~-~~~~~~~l~ 57 (261)
T 2rbk_A 3 KALFFDIDGTLVSF------ET--HRIPSSTIEALEAAHAKGLKIFIATGRP-KA-IINNLSELQ 57 (261)
T ss_dssp CEEEECSBTTTBCT------TT--SSCCHHHHHHHHHHHHTTCEEEEECSSC-GG-GCCSCHHHH
T ss_pred cEEEEeCCCCCcCC------CC--CcCCHHHHHHHHHHHHCCCEEEEECCCh-HH-HHHHHHHhC
Confidence 78999999999983 22 1267889999999999999999999999 77 565555555
No 145
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=98.73 E-value=6.3e-09 Score=80.38 Aligned_cols=53 Identities=25% Similarity=0.330 Sum_probs=43.3
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHH
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLH 84 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~ 84 (149)
.++++++|+||||++ +++ .+.+.+.++|++|+++ ++++++|||+... +...+.
T Consensus 12 ~~kli~~DlDGTLl~------~~~---~is~~~~~al~~l~~~-i~v~iaTGR~~~~-~~~~l~ 64 (262)
T 2fue_A 12 ERVLCLFDVDGTLTP------ARQ---KIDPEVAAFLQKLRSR-VQIGVVGGSDYCK-IAEQLG 64 (262)
T ss_dssp -CEEEEEESBTTTBS------TTS---CCCHHHHHHHHHHTTT-SEEEEECSSCHHH-HHHHHS
T ss_pred CeEEEEEeCccCCCC------CCC---cCCHHHHHHHHHHHhC-CEEEEEcCCCHHH-HHHHHh
Confidence 479999999999998 232 4678999999999999 9999999998776 455443
No 146
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=98.72 E-value=1.7e-08 Score=77.03 Aligned_cols=47 Identities=28% Similarity=0.362 Sum_probs=40.4
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
.+|++++|+||||++ +++ .+.+.+.++|++|+++ ++++++|||+...
T Consensus 5 ~~kli~~DlDGTLl~------~~~---~i~~~~~~al~~l~~~-i~v~iaTGR~~~~ 51 (246)
T 2amy_A 5 GPALCLFDVDGTLTA------PRQ---KITKEMDDFLQKLRQK-IKIGVVGGSDFEK 51 (246)
T ss_dssp CSEEEEEESBTTTBC------TTS---CCCHHHHHHHHHHTTT-SEEEEECSSCHHH
T ss_pred CceEEEEECCCCcCC------CCc---ccCHHHHHHHHHHHhC-CeEEEEcCCCHHH
Confidence 378999999999998 232 4678999999999999 9999999998655
No 147
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=98.64 E-value=2.4e-08 Score=82.03 Aligned_cols=100 Identities=12% Similarity=-0.009 Sum_probs=71.6
Q ss_pred ccEEEEecCCcccccccc-----c-----cc---------------------cCCCCccCccHHHHHHHHHHCCceEEEE
Q 032013 22 PRLVVFDLDYTLWPFYCE-----C-----CY---------------------EDEIPYLYPHAKGILEALKEKGIHVAVA 70 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~-----~-----~~---------------------~~~~~~~~pg~~e~L~~Lk~~Gi~i~Ia 70 (149)
.++++|||||||+++... | ++ ..-.+...||+.++|+++. +++.++|.
T Consensus 18 k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~-~~yeivI~ 96 (372)
T 3ef0_A 18 RLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYELHIY 96 (372)
T ss_dssp CEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH-TTEEEEEE
T ss_pred CCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh-cCcEEEEE
Confidence 578999999999997211 0 00 0112556899999999999 67999999
Q ss_pred eCCCchHHHHHHHHHcCCCC-CcccccccC-CChhHHHHHH----h-hCCCcceEEEeehHh
Q 032013 71 SRSPAPDIAKTFLHKLGIHS-MFVPMVRLS-CCIMCIIFFL----F-FFSISAFILFVDLFC 125 (149)
Q Consensus 71 T~~~~~~i~~~~l~~~gl~~-~f~~~~~~~-p~p~~~i~~~----~-~~~~~~~l~~eDs~~ 125 (149)
|++.... +..+++.++... +|...-... ..+ .+|.+ + +.+++.+++++|++.
T Consensus 97 Tas~~~y-A~~vl~~LDp~~~~f~~ri~sr~~~g--~~~~KdL~~L~~~dl~~viiiDd~~~ 155 (372)
T 3ef0_A 97 TMGTKAY-AKEVAKIIDPTGKLFQDRVLSRDDSG--SLAQKSLRRLFPCDTSMVVVIDDRGD 155 (372)
T ss_dssp CSSCHHH-HHHHHHHHCTTSCSSSSCEECTTTSS--CSSCCCGGGTCSSCCTTEEEEESCSG
T ss_pred eCCcHHH-HHHHHHHhccCCceeeeEEEEecCCC--CcceecHHHhcCCCCceEEEEeCCHH
Confidence 9999998 899999999877 676321111 111 23433 2 456799999999974
No 148
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=98.55 E-value=3.1e-08 Score=75.80 Aligned_cols=55 Identities=20% Similarity=0.226 Sum_probs=44.3
Q ss_pred cEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 23 k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.++++|+||||++. +. ..+.+.++|++++ +|++++++|||+... +..+++.+++.
T Consensus 4 ~li~~DlDGTLl~~------~~----~~~~~~~~l~~~~-~gi~v~iaTGR~~~~-~~~~~~~l~l~ 58 (244)
T 1s2o_A 4 LLLISDLDNTWVGD------QQ----ALEHLQEYLGDRR-GNFYLAYATGRSYHS-ARELQKQVGLM 58 (244)
T ss_dssp EEEEECTBTTTBSC------HH----HHHHHHHHHHTTG-GGEEEEEECSSCHHH-HHHHHHHHTCC
T ss_pred eEEEEeCCCCCcCC------HH----HHHHHHHHHHHhc-CCCEEEEEcCCCHHH-HHHHHHHcCCC
Confidence 48999999999983 21 2256778888866 589999999999998 68899988774
No 149
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=98.33 E-value=9.7e-08 Score=76.95 Aligned_cols=115 Identities=18% Similarity=0.153 Sum_probs=78.4
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccc-----
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM----- 95 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~----- 95 (149)
..+++++|+||||++... ......+...||+.++|+++.+ .|.++|.|++.... +..+++.++....+...
T Consensus 139 ~k~tLVLDLDeTLvh~~~--~~~~~~~~~RP~l~eFL~~l~~-~yeivIfTas~~~y-a~~vld~Ld~~~~~~~~~~~~r 214 (320)
T 3shq_A 139 GKKLLVLDIDYTLFDHRS--PAETGTELMRPYLHEFLTSAYE-DYDIVIWSATSMRW-IEEKMRLLGVASNDNYKVMFYL 214 (320)
T ss_dssp TCEEEEECCBTTTBCSSS--CCSSHHHHBCTTHHHHHHHHHH-HEEEEEECSSCHHH-HHHHHHHTTCTTCSSCCCCEEE
T ss_pred CCcEEEEeccccEEcccc--cCCCcceEeCCCHHHHHHHHHh-CCEEEEEcCCcHHH-HHHHHHHhCCCCCcceeEEEEE
Confidence 357899999999998521 1112235688999999999995 59999999999999 89999998865542110
Q ss_pred -cc--cC--CChhHHHHHH----h-----hCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 96 -VR--LS--CCIMCIIFFL----F-----FFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 96 -~~--~~--p~p~~~i~~~----~-----~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.. .. ....+..|.+ + +.+++++++++||+......-..|+++.=
T Consensus 215 ~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~~ 272 (320)
T 3shq_A 215 DSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRP 272 (320)
T ss_dssp CGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEECCC
T ss_pred cCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEEeCe
Confidence 10 00 0000112222 2 56779999999999877666566655443
No 150
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=98.10 E-value=3.8e-06 Score=65.73 Aligned_cols=44 Identities=16% Similarity=0.168 Sum_probs=40.0
Q ss_pred CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC
Q 032013 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~ 90 (149)
..++.||+.++++.|+++|+++.++|+..... ++.+++++|+..
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~-i~~i~~~~g~~~ 182 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDV-LEEVIRQAGVYH 182 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHH-HHHHHHHTTCCC
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHH-HHHHHHHcCCCc
Confidence 46899999999999999999999999998887 799999999754
No 151
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=97.83 E-value=1.4e-05 Score=64.46 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=34.4
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
.++|++.+++++|+++|+.+.|+|+++... ++.+.+..
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~-v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEEL-VRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHH-HHHHHhhc
Confidence 589999999999999999999999999887 68888764
No 152
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=97.70 E-value=9.9e-05 Score=64.25 Aligned_cols=102 Identities=14% Similarity=0.001 Sum_probs=79.2
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~ 101 (149)
.+.+.+..|+++...-. -..++.|++.+.+++|+++|+++.++||.+... ++.+.+++|+..+|.. ..|.
T Consensus 437 ~~~l~va~~~~~~G~i~------~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~-a~~ia~~lgi~~~~~~---~~P~ 506 (645)
T 3j08_A 437 KTAVIVARNGRVEGIIA------VSDTLKESAKPAVQELKRMGIKVGMITGDNWRS-AEAISRELNLDLVIAE---VLPH 506 (645)
T ss_dssp CCCEEEEETTEEEEEEE------EECCCTTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCSEEECS---CCTT
T ss_pred CeEEEEEECCEEEEEEE------ecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCCEEEEe---CCHH
Confidence 46688888999875211 112588999999999999999999999999998 8999999999765543 2455
Q ss_pred hhHHHHHHhhCCCcceEEEeehHhHHHHHHHhC
Q 032013 102 IMCIIFFLFFFSISAFILFVDLFCFMYAAAYVG 134 (149)
Q Consensus 102 p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag 134 (149)
....+--..+-. ++++.+=|..|++.+.++||
T Consensus 507 ~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~ 538 (645)
T 3j08_A 507 QKSEEVKKLQAK-EVVAFVGDGINDAPALAQAD 538 (645)
T ss_dssp CHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSS
T ss_pred hHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCC
Confidence 544444444444 77888899999999999997
No 153
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=97.48 E-value=0.00019 Score=54.54 Aligned_cols=90 Identities=11% Similarity=0.007 Sum_probs=58.6
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCc------hHHHH-HHHHHcCC-------------CCCccc--------------
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPA------PDIAK-TFLHKLGI-------------HSMFVP-------------- 94 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~------~~i~~-~~l~~~gl-------------~~~f~~-------------- 94 (149)
..+.+.++++.+++.|+++.+.|+... .. .. ..++.+++ ..++..
T Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 164 (261)
T 2rbk_A 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEM-VKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLP 164 (261)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHH-HHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHH-HHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHHHHHHHH
Confidence 347788999999999999999886653 22 12 22222221 111110
Q ss_pred -----------------ccccCCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 95 -----------------MVRLSCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 95 -----------------~~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
....+|+|.+..++. .++++++|++|.||.|++.++++||+.+.+
T Consensus 165 ~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~ 228 (261)
T 2rbk_A 165 SIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM 228 (261)
T ss_dssp GSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred hcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe
Confidence 112245555555554 567789999999999999999999986654
No 154
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=97.42 E-value=7.4e-06 Score=65.12 Aligned_cols=40 Identities=8% Similarity=-0.222 Sum_probs=28.4
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA 75 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~ 75 (149)
++++|+||+||||++. +. . +.+.+++++|+.++++||++.
T Consensus 20 ~~kli~fDlDGTLld~------~~--------~-~~l~~~~~~g~~~~~~tGR~~ 59 (332)
T 1y8a_A 20 QGHMFFTDWEGPWILT------DF--------A-LELCMAVFNNARFFSNLSEYD 59 (332)
T ss_dssp CCCEEEECSBTTTBCC------CH--------H-HHHHHHHHCCHHHHHHHHHHH
T ss_pred CceEEEEECcCCCcCc------cH--------H-HHHHHHHHCCCEEEEEcCCCc
Confidence 4789999999999983 11 1 566666677767777776654
No 155
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=97.35 E-value=0.00067 Score=59.73 Aligned_cols=103 Identities=14% Similarity=-0.003 Sum_probs=78.9
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p 100 (149)
..+.+.+..||+++..-.. . .++.|++.+.+++|+++|+++.++||.+... +..+.+++|+..++.. ..|
T Consensus 514 g~~~~~va~~~~~~G~i~i--~----D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~-a~~ia~~lgi~~~~~~---~~P 583 (723)
T 3j09_A 514 AKTAVIVARNGRVEGIIAV--S----DTLKESAKPAVQELKRMGIKVGMITGDNWRS-AEAISRELNLDLVIAE---VLP 583 (723)
T ss_dssp TCEEEEEEETTEEEEEEEE--E----CCSCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCSEEECS---CCT
T ss_pred CCeEEEEEECCEEEEEEee--c----CCcchhHHHHHHHHHHCCCEEEEECCCCHHH-HHHHHHHcCCcEEEcc---CCH
Confidence 3567888999998752110 1 2588999999999999999999999999998 8999999999765432 245
Q ss_pred ChhHHHHHHhhCCCcceEEEeehHhHHHHHHHhC
Q 032013 101 CIMCIIFFLFFFSISAFILFVDLFCFMYAAAYVG 134 (149)
Q Consensus 101 ~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag 134 (149)
.....+--..+-. +.++.+=|..|++.+.++||
T Consensus 584 ~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~ 616 (723)
T 3j09_A 584 HQKSEEVKKLQAK-EVVAFVGDGINDAPALAQAD 616 (723)
T ss_dssp TCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSS
T ss_pred HHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCC
Confidence 5544444344433 77888889999999999997
No 156
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=97.34 E-value=0.00026 Score=60.67 Aligned_cols=95 Identities=13% Similarity=0.008 Sum_probs=72.0
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc-C-------------CCCCccccc--ccCCChhH------
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL-G-------------IHSMFVPMV--RLSCCIMC------ 104 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~-g-------------l~~~f~~~~--~~~p~p~~------ 104 (149)
+..-|++..+|++|++.| ++.++||++... +...++.+ | +.++|+.+. ..||....
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~y-v~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr 322 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKY-TDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLR 322 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHH-HHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEE
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHH-HHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcce
Confidence 345578889999999999 999999999998 78888887 6 456788742 33555322
Q ss_pred -----------------------------HHHHH-hhCCCcceEEEeehHhH-HHHHH-HhCCchhhhhhh
Q 032013 105 -----------------------------IIFFL-FFFSISAFILFVDLFCF-MYAAA-YVGCDLYVYKRL 143 (149)
Q Consensus 105 -----------------------------~i~~~-~~~~~~~~l~~eDs~~g-i~aa~-~ag~~~~~~~~~ 143 (149)
..+.+ .+...++.+.|=|...| |..++ .+|.+|+.+...
T Consensus 323 ~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 323 QVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp EEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred EeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 22222 56777899999998766 88886 899999987764
No 157
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=97.31 E-value=0.00039 Score=61.47 Aligned_cols=103 Identities=12% Similarity=-0.000 Sum_probs=76.1
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~ 101 (149)
.+.+++..||+++..-.. . -++.|++.+.+++|+++|+++.++||.+... +..+.+++|+.+++.. ..|.
T Consensus 534 ~~vl~va~d~~~~G~i~i--~----D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~-a~~ia~~lgi~~v~a~---~~P~ 603 (736)
T 3rfu_A 534 ASVMFMAVDGKTVALLVV--E----DPIKSSTPETILELQQSGIEIVMLTGDSKRT-AEAVAGTLGIKKVVAE---IMPE 603 (736)
T ss_dssp CEEEEEEETTEEEEEEEE--E----CCBCSSHHHHHHHHHHHTCEEEEECSSCHHH-HHHHHHHHTCCCEECS---CCHH
T ss_pred CeEEEEEECCEEEEEEEe--e----ccchhhHHHHHHHHHHCCCeEEEECCCCHHH-HHHHHHHcCCCEEEEe---cCHH
Confidence 577899999998752110 1 2588999999999999999999999999998 8999999999765432 2333
Q ss_pred hhHHHHHHhhCCCcceEEEeehHhHHHHHHHhC
Q 032013 102 IMCIIFFLFFFSISAFILFVDLFCFMYAAAYVG 134 (149)
Q Consensus 102 p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag 134 (149)
....+--..+-..+..+.+=|..|+..+-++||
T Consensus 604 ~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~Ad 636 (736)
T 3rfu_A 604 DKSRIVSELKDKGLIVAMAGDGVNDAPALAKAD 636 (736)
T ss_dssp HHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSS
T ss_pred HHHHHHHHHHhcCCEEEEEECChHhHHHHHhCC
Confidence 322222223333456777789999999999886
No 158
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=97.12 E-value=0.00034 Score=55.39 Aligned_cols=90 Identities=12% Similarity=0.013 Sum_probs=61.3
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccc-----------------------cccCCC---
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM-----------------------VRLSCC--- 101 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~-----------------------~~~~p~--- 101 (149)
.+.+++.++++.|++ |++++++|+..... +....+.+++.+.+... ....+.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQY-LRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHH-HHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEE-EcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 578999999999999 99999999887555 56666667763332110 000111
Q ss_pred ----------hhHHHHH----------H----hhCCCcc----eEEEeehHhHHHHHHHh----CCchhh
Q 032013 102 ----------IMCIIFF----------L----FFFSISA----FILFVDLFCFMYAAAYV----GCDLYV 139 (149)
Q Consensus 102 ----------p~~~i~~----------~----~~~~~~~----~l~~eDs~~gi~aa~~a----g~~~~~ 139 (149)
..+..|. + .++++++ |++|.|+.|++.++++| |+.+.+
T Consensus 181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam 250 (332)
T 1y8a_A 181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF 250 (332)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe
Confidence 0011222 1 3566788 99999999999999999 986554
No 159
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=96.80 E-value=0.0072 Score=54.89 Aligned_cols=87 Identities=13% Similarity=-0.008 Sum_probs=65.0
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccc----------------------------cccC
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM----------------------------VRLS 99 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~----------------------------~~~~ 99 (149)
++.|++.++++.|++.|+++.++||..... +..+.+++|+....... ....
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~t-a~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~ 681 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGT-AIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 681 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHH-HHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence 588999999999999999999999999988 89999999996532110 0112
Q ss_pred CChhHHHHHHhhCCCcceEEEeehHhHHHHHHHhCC
Q 032013 100 CCIMCIIFFLFFFSISAFILFVDLFCFMYAAAYVGC 135 (149)
Q Consensus 100 p~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag~ 135 (149)
|.....+--..+-.-+.++.+-|..|++.|-++|++
T Consensus 682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Adv 717 (995)
T 3ar4_A 682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEI 717 (995)
T ss_dssp SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTE
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCe
Confidence 443333333333333678899999999999999974
No 160
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=96.74 E-value=0.0023 Score=53.54 Aligned_cols=102 Identities=12% Similarity=-0.028 Sum_probs=68.4
Q ss_pred CccEEEEecCCccccccccc----------cc---------------------cCCCCccCccHHHHHHHHHHCCceEEE
Q 032013 21 LPRLVVFDLDYTLWPFYCEC----------CY---------------------EDEIPYLYPHAKGILEALKEKGIHVAV 69 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~----------~~---------------------~~~~~~~~pg~~e~L~~Lk~~Gi~i~I 69 (149)
....+++|+|.||+...... ++ ..-.+...||+.++|+++. +.|.++|
T Consensus 25 ~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls-~~yEivI 103 (442)
T 3ef1_A 25 KRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYELHI 103 (442)
T ss_dssp TCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHT-TTEEEEE
T ss_pred CCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHh-CCcEEEE
Confidence 35679999999999863210 00 0112566899999999998 5699999
Q ss_pred EeCCCchHHHHHHHHHcCCCC-CcccccccCCChhHHHHHH-----hhCCCcceEEEeehHh
Q 032013 70 ASRSPAPDIAKTFLHKLGIHS-MFVPMVRLSCCIMCIIFFL-----FFFSISAFILFVDLFC 125 (149)
Q Consensus 70 aT~~~~~~i~~~~l~~~gl~~-~f~~~~~~~p~p~~~i~~~-----~~~~~~~~l~~eDs~~ 125 (149)
.|++.... +..+++.++... +|...-....+- +..|.+ .+.+.+..++++|++.
T Consensus 104 fTas~~~Y-A~~Vl~~LDp~~~~f~~Rl~sRd~c-g~~~~KdL~~ll~rdl~~vvIIDd~p~ 163 (442)
T 3ef1_A 104 YTMGTKAY-AKEVAKIIDPTGKLFQDRVLSRDDS-GSLAQKSLRRLFPCDTSMVVVIDDRGD 163 (442)
T ss_dssp ECSSCHHH-HHHHHHHHCTTSTTTTTCEECTTTS-SCSSCCCGGGTCSSCCTTEEEEESCSG
T ss_pred EcCCCHHH-HHHHHHHhccCCccccceEEEecCC-CCceeeehHHhcCCCcceEEEEECCHH
Confidence 99999998 899999998776 565421111111 011222 1345578888888873
No 161
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=96.74 E-value=0.00089 Score=51.21 Aligned_cols=77 Identities=9% Similarity=0.003 Sum_probs=50.5
Q ss_pred HHHCCceEEEEeCCCchHHHHHHHHHcC--CCCCcccc----------cccCCChhHHHHHH--hhCCCcceEEEeehHh
Q 032013 60 LKEKGIHVAVASRSPAPDIAKTFLHKLG--IHSMFVPM----------VRLSCCIMCIIFFL--FFFSISAFILFVDLFC 125 (149)
Q Consensus 60 Lk~~Gi~i~IaT~~~~~~i~~~~l~~~g--l~~~f~~~----------~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~ 125 (149)
+++.+++++++|+... ....++.++ +..+|... ....+++.+.-++. .++++++|++|.||.|
T Consensus 142 ~~~~~~ki~i~~~~~~---~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~n 218 (271)
T 1rlm_A 142 IDDVLFKFSLNLPDEQ---IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN 218 (271)
T ss_dssp CCSCEEEEEEECCGGG---HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred CCCceEEEEEEcCHHH---HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHH
Confidence 3456788998887643 233343332 33323221 23356666655555 5677899999999999
Q ss_pred HHHHHHHhCCchhh
Q 032013 126 FMYAAAYVGCDLYV 139 (149)
Q Consensus 126 gi~aa~~ag~~~~~ 139 (149)
++..++.||+.+.+
T Consensus 219 D~~m~~~ag~~va~ 232 (271)
T 1rlm_A 219 DAEMLKMARYSFAM 232 (271)
T ss_dssp GHHHHHHCSEEEEC
T ss_pred HHHHHHHcCCeEEe
Confidence 99999999987654
No 162
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=96.58 E-value=0.0066 Score=45.64 Aligned_cols=30 Identities=13% Similarity=0.100 Sum_probs=26.8
Q ss_pred hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 110 FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 110 ~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.++++++|++|.||.|++..+++||+.+.+
T Consensus 195 lgi~~~~~ia~GDs~NDi~ml~~ag~~vam 224 (258)
T 2pq0_A 195 LGIDKKDVYAFGDGLNDIEMLSFVGTGVAM 224 (258)
T ss_dssp HTCCGGGEEEECCSGGGHHHHHHSSEEEEE
T ss_pred hCCCHHHEEEECCcHHhHHHHHhCCcEEEe
Confidence 667889999999999999999999987654
No 163
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=96.26 E-value=0.0026 Score=52.08 Aligned_cols=43 Identities=16% Similarity=0.116 Sum_probs=39.0
Q ss_pred CCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 46 ~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
..+++|++.+++++|+++|+++.|+|++.... ++.+.+.+|+.
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~-v~~ia~~lg~~ 261 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDI-VRAFATDTNNN 261 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHCTTSS
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHH-HHHHHHHhCcc
Confidence 36799999999999999999999999999888 79999998763
No 164
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=96.02 E-value=0.0012 Score=50.59 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=14.5
Q ss_pred CccEEEEecCCccccc
Q 032013 21 LPRLVVFDLDYTLWPF 36 (149)
Q Consensus 21 ~~k~vifDlDGTLld~ 36 (149)
++++|+||+||||+|.
T Consensus 9 ~ikaviFDlDGTL~ds 24 (261)
T 1yns_A 9 EVTVILLDIEGTTTPI 24 (261)
T ss_dssp TCCEEEECCBTTTBCH
T ss_pred CCCEEEEecCCCccch
Confidence 4899999999999984
No 165
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=95.58 E-value=0.0081 Score=48.57 Aligned_cols=30 Identities=17% Similarity=0.099 Sum_probs=26.4
Q ss_pred CCcceEEEeehH-hHHHHHHHhCCchhhhhh
Q 032013 113 SISAFILFVDLF-CFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 113 ~~~~~l~~eDs~-~gi~aa~~ag~~~~~~~~ 142 (149)
++++|+++.|++ .+|++|++|||+++.+..
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~ 319 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKT 319 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHHTCEEEECSS
T ss_pred CcceEEEEecCcHHHHHHHHHcCCEEEEEcc
Confidence 568999999999 599999999999987653
No 166
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=95.03 E-value=0.0091 Score=46.04 Aligned_cols=17 Identities=29% Similarity=0.020 Sum_probs=15.0
Q ss_pred ccEEEEecCCccccccc
Q 032013 22 PRLVVFDLDYTLWPFYC 38 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~ 38 (149)
+++|+||+||||+++..
T Consensus 32 i~~viFD~dGTL~ds~~ 48 (287)
T 3a1c_A 32 VTAVIFDKTGTLTKGKP 48 (287)
T ss_dssp CCEEEEECCCCCBCSCC
T ss_pred CCEEEEeCCCCCcCCCE
Confidence 78999999999999644
No 167
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=94.67 E-value=0.1 Score=39.79 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=31.1
Q ss_pred CChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 100 CCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 100 p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
+++.+.-++. .+++++++++|-|+.|++..+++||+-+.+
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam 252 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV 252 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc
Confidence 3444455554 667779999999999999999999976544
No 168
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=94.38 E-value=0.16 Score=46.27 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=38.5
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
++.|++.+++++|+++|+++.++||++... +..+.+++|+.
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~t-A~~ia~~lgi~ 644 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPIT-AKAIAASVGII 644 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHH-HHHHHHHcCCC
Confidence 688999999999999999999999999998 89999999984
No 169
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=94.11 E-value=0.09 Score=40.49 Aligned_cols=39 Identities=10% Similarity=-0.039 Sum_probs=30.4
Q ss_pred ChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 101 CIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 101 ~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
++.+.-++. .+++++++++|.||.|++..+++||+.+.+
T Consensus 229 K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam 269 (304)
T 3l7y_A 229 KGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM 269 (304)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC
T ss_pred HHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc
Confidence 343455554 567789999999999999999999976544
No 170
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=93.51 E-value=0.3 Score=44.55 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=38.7
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
++.|++.+++++|++.|+++.++||..... +..+.+++|+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~t-A~~ia~~lgi~ 639 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPIT-AKAIAKGVGII 639 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTSS
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHH-HHHHHHHcCCC
Confidence 688999999999999999999999999988 89999999986
No 171
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=93.08 E-value=0.33 Score=43.94 Aligned_cols=42 Identities=12% Similarity=0.098 Sum_probs=39.3
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~ 90 (149)
++.|++.+++++|++.|+++.++||-.... +..+.+++|+..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~T-A~aIA~~lGI~~ 576 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGI-ARETSRQLGLGT 576 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHH-HHHHHHHHTSSC
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHH-HHHHHHHcCCCc
Confidence 689999999999999999999999999888 899999999963
No 172
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=92.86 E-value=0.037 Score=45.24 Aligned_cols=19 Identities=16% Similarity=0.114 Sum_probs=15.2
Q ss_pred ccEEEEecCCccccccccc
Q 032013 22 PRLVVFDLDYTLWPFYCEC 40 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~ 40 (149)
+|.|+||+||++++-+.+|
T Consensus 1 ~~~~~fdvdgv~~~~~~~~ 19 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCF 19 (384)
T ss_dssp CCEEEECSBTTTBCSHHHH
T ss_pred CceEEEecCceeechhhhc
Confidence 3679999999999865553
No 173
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=92.51 E-value=0.068 Score=40.50 Aligned_cols=41 Identities=10% Similarity=0.039 Sum_probs=31.9
Q ss_pred CCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 99 SCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 99 ~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.+++.+..++. .++++++|++|.|+.|++.+++.||+.+.+
T Consensus 189 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~ 231 (268)
T 1nf2_A 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM 231 (268)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe
Confidence 34554555554 567889999999999999999999986544
No 174
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=92.18 E-value=0.17 Score=42.54 Aligned_cols=56 Identities=14% Similarity=0.128 Sum_probs=45.6
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc---------CCCCCcccccccCCChhHHHHH
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL---------GIHSMFVPMVRLSCCIMCIIFF 108 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~---------gl~~~f~~~~~~~p~p~~~i~~ 108 (149)
-|.+..+|++|++.|.++.++||++... +...++.+ .+.++||.+....-+| ..|.
T Consensus 188 ~~~l~~~L~~lr~~GKklFLiTNS~~~y-~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP--~FF~ 252 (470)
T 4g63_A 188 EKEVVEGLKHFIRYGKKIFILTNSEYSY-SKLLLDYALSPFLDKGEHWQGLFEFVITLANKP--RFFY 252 (470)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHH-HHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTT--HHHH
T ss_pred CHhHHHHHHHHHHcCCeEEEeeCCCchH-HHHHHHhhcccCCCCCCChhhhcCEEEECCCCC--Cccc
Confidence 4778899999999999999999999988 67777763 4778899887666666 5554
No 175
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=91.64 E-value=0.12 Score=39.49 Aligned_cols=30 Identities=7% Similarity=-0.086 Sum_probs=25.9
Q ss_pred hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 110 FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 110 ~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.++++++|++|.||.|++.++++||+.+.+
T Consensus 228 ~~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 257 (288)
T 1nrw_A 228 LNIPLEETAAVGDSLNDKSMLEAAGKGVAM 257 (288)
T ss_dssp TTCCGGGEEEEESSGGGHHHHHHSSEEEEC
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHcCcEEEE
Confidence 567778999999999999999999985544
No 176
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=90.51 E-value=0.16 Score=38.60 Aligned_cols=41 Identities=12% Similarity=-0.029 Sum_probs=31.8
Q ss_pred CCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 99 SCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 99 ~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.+++.+.-++. .+++++++++|=|+.|.+..++.||+-+.+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm 250 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM 250 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc
Confidence 44555555555 567779999999999999999999966543
No 177
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=88.87 E-value=1.3 Score=32.04 Aligned_cols=88 Identities=8% Similarity=0.024 Sum_probs=62.0
Q ss_pred hHHHHHhhhhccCCCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCc-eEEEEeCCCchHHHHHHHHH
Q 032013 7 VKNEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGI-HVAVASRSPAPDIAKTFLHK 85 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi-~i~IaT~~~~~~i~~~~l~~ 85 (149)
+++++.++.....+.-..|++|..|.-+++ ++..+.|+.+...|. .++++=|++... ...+.++
T Consensus 60 ~~~Eg~~il~~i~~~~~vI~LD~~Gk~~sS--------------~~fA~~l~~~~~~g~~~i~FvIGG~~Gl-~~~v~~r 124 (163)
T 4fak_A 60 KEKEGQRILAKIKPQSTVITLEIQGKMLSS--------------EGLAQELNQRMTQGQSDFVFVIGGSNGL-HKDVLQR 124 (163)
T ss_dssp HHHHHHHHHHTCCTTSEEEEEEEEEEECCH--------------HHHHHHHHHHHHTTCCEEEEEECBTTBC-CHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCCCcCCH--------------HHHHHHHHHHHhcCCcceEEEEECCCcc-CHHHHHh
Confidence 345555554444444568999999999973 567788999988886 799999888765 4666666
Q ss_pred cCCCCCcccccccCCChhHHHHHHhh
Q 032013 86 LGIHSMFVPMVRLSCCIMCIIFFLFF 111 (149)
Q Consensus 86 ~gl~~~f~~~~~~~p~p~~~i~~~~~ 111 (149)
.+. .++.....=||++..+.+.++
T Consensus 125 A~~--~lSlS~mTfpHqL~RliL~EQ 148 (163)
T 4fak_A 125 SNY--ALSFSKMTFPHQMMRVVLIEQ 148 (163)
T ss_dssp CSE--EEESCSSCCCHHHHHHHHHHH
T ss_pred cCc--eEEEecCCCCHHHHHHHHHHH
Confidence 543 244445668999998887643
No 178
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=87.56 E-value=0.39 Score=43.27 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=38.4
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
++.|++.+++++|++.|+++.++||-.... +..+.+++|+.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~t-A~~iA~~lGi~ 528 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAI-GKETGRRLGMG 528 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHH-HTHHHHTTTCT
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHH-HHHHHHHhCCc
Confidence 688999999999999999999999999888 89999999985
No 179
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=87.27 E-value=0.11 Score=39.50 Aligned_cols=20 Identities=15% Similarity=-0.154 Sum_probs=16.4
Q ss_pred CCCccEEEEecCCccccccc
Q 032013 19 ENLPRLVVFDLDYTLWPFYC 38 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~~~ 38 (149)
...+++++||.||||+.+.+
T Consensus 25 l~~i~~v~fDktGTLT~g~~ 44 (263)
T 2yj3_A 25 IKEIDTIIFEKTGTLTYGTP 44 (263)
Confidence 34588999999999998644
No 180
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=86.01 E-value=5.1 Score=26.69 Aligned_cols=69 Identities=12% Similarity=0.008 Sum_probs=46.5
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCC
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p 100 (149)
.++.+++|+-++-.= ++ .-..-..++.++++++|.++.++.-++ . +...++..|+.+.|.....+..
T Consensus 47 ~~~~vvlDls~v~~i-----Ds-----sgl~~L~~~~~~~~~~g~~l~l~~~~~--~-v~~~l~~~gl~~~~~~~~i~~t 113 (130)
T 2kln_A 47 QVEWFVLNAESNVEV-----DL-----TALDALDQLRTELLRRGIVFAMARVKQ--D-LRESLRAASLLDKIGEDHIFMT 113 (130)
T ss_dssp CCEEEEEECSCCSSS-----BC-----STTTHHHHHHHHHHTTTEEEEEECCSS--H-HHHHHHHCTTHHHHCTTEEESC
T ss_pred CceEEEEECCCCChh-----hH-----HHHHHHHHHHHHHHHCCCEEEEEcCCH--H-HHHHHHHcCChhhcCcceeECC
Confidence 468899999876542 12 233455688899999999998776543 4 5788999998766544344433
Q ss_pred Ch
Q 032013 101 CI 102 (149)
Q Consensus 101 ~p 102 (149)
-.
T Consensus 114 ~~ 115 (130)
T 2kln_A 114 LP 115 (130)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 181
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=85.92 E-value=0.57 Score=35.58 Aligned_cols=40 Identities=10% Similarity=-0.063 Sum_probs=30.4
Q ss_pred CChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 100 CCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 100 p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
+++.+.-++. .+++++++++|.|+.|++..++.||+-+.+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 239 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV 239 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe
Confidence 4444444444 567789999999999999999999975433
No 182
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=85.08 E-value=4.4 Score=32.40 Aligned_cols=86 Identities=10% Similarity=-0.006 Sum_probs=51.3
Q ss_pred HHHHHHHHHC-CceE-EEEeCCCchHHHHHHHHHcCCCCCccc-ccccCCChh---HHHHHH-----hhCCCcceEEEee
Q 032013 54 KGILEALKEK-GIHV-AVASRSPAPDIAKTFLHKLGIHSMFVP-MVRLSCCIM---CIIFFL-----FFFSISAFILFVD 122 (149)
Q Consensus 54 ~e~L~~Lk~~-Gi~i-~IaT~~~~~~i~~~~l~~~gl~~~f~~-~~~~~p~p~---~~i~~~-----~~~~~~~~l~~eD 122 (149)
..+++.|+++ ++.+ .++||..... ....++.+++..-++. +........ +..... ....|.-.+++.|
T Consensus 42 a~li~~l~~~~~~~~~~~~tG~h~~~-~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~ 120 (396)
T 3dzc_A 42 APLVQQLCQDNRFVAKVCVTGQHREM-LDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGD 120 (396)
T ss_dssp HHHHHHHHHCTTEEEEEEECCSSSHH-HHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETT
T ss_pred HHHHHHHHhCCCCcEEEEEecccHHH-HHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 4678888886 7877 4777777654 5777888998422221 111111111 111111 3367777777776
Q ss_pred hHh---HHHHHHHhCCchhhh
Q 032013 123 LFC---FMYAAAYVGCDLYVY 140 (149)
Q Consensus 123 s~~---gi~aa~~ag~~~~~~ 140 (149)
-.. +..+|+..|++++.+
T Consensus 121 ~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 121 TATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp SHHHHHHHHHHHTTTCCEEEE
T ss_pred chhHHHHHHHHHHhCCCEEEE
Confidence 544 567788889997654
No 183
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=84.60 E-value=0.62 Score=35.97 Aligned_cols=40 Identities=13% Similarity=0.009 Sum_probs=30.7
Q ss_pred CChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 100 CCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 100 p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
+++.+.-++. .+++++++++|-|+.|++..+++||+.+.+
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 265 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV 265 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEE
Confidence 4444455544 567779999999999999999999986543
No 184
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=83.71 E-value=6.6 Score=29.28 Aligned_cols=68 Identities=10% Similarity=0.089 Sum_probs=43.1
Q ss_pred HHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCChhHHHHHHh------hCCCcceEEEeehHhHHH
Q 032013 55 GILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLF------FFSISAFILFVDLFCFMY 128 (149)
Q Consensus 55 e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~------~~~~~~~l~~eDs~~gi~ 128 (149)
++++++++.+.+++++|+..... .....-..|..+|+. ||.+....++.. .-....-+++||.+.-..
T Consensus 65 ~~~~~lr~~~~pvi~lt~~~~~~-~~~~a~~~Ga~dyl~-----Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~~~~ 138 (259)
T 3luf_A 65 EAVKVLLERGLPVVILTADISED-KREAWLEAGVLDYVM-----KDSRHSLQYAVGLVHRLYLNQQIEVLVVDDSRTSRH 138 (259)
T ss_dssp HHHHHHHHTTCCEEEEECC-CHH-HHHHHHHTTCCEEEE-----CSSHHHHHHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred HHHHHHHhCCCCEEEEEccCCHH-HHHHHHHCCCcEEEe-----CCchhHHHHHHHhhhhHhhcCCCcEEEEeCCHHHHH
Confidence 67888888899999999987766 455555678776653 565543333321 112346688888776443
No 185
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=82.14 E-value=9.9 Score=26.77 Aligned_cols=102 Identities=15% Similarity=0.133 Sum_probs=65.9
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEe---CCCchHHHHHHHHHcCCCCCccccccc
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS---RSPAPDIAKTFLHKLGIHSMFVPMVRL 98 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT---~~~~~~i~~~~l~~~gl~~~f~~~~~~ 98 (149)
+|+|+||+||||++. . ...+...++++.++++|+++.++| +++... +...+...|+... .....
T Consensus 3 ~k~i~fDlDGTLl~~------~----~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~-~~~~~~~~g~~~~--~~~~~ 69 (250)
T 2c4n_A 3 IKNVICDIDGVLMHD------N----VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQD-LANRFATAGVDVP--DSVFY 69 (250)
T ss_dssp CCEEEEECBTTTEET------T----EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHH-HHHHHHHTTCCCC--GGGEE
T ss_pred ccEEEEcCcceEEeC------C----EeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHH-HHHHHHHcCCCCC--HHHeE
Confidence 789999999999983 2 233455889999999999999999 555555 4566666665311 11111
Q ss_pred CCChhHHHHHHhhCCCcceEEEeehHhHHHHHHHhCCchh
Q 032013 99 SCCIMCIIFFLFFFSISAFILFVDLFCFMYAAAYVGCDLY 138 (149)
Q Consensus 99 ~p~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~~ag~~~~ 138 (149)
...-....|.. .-....+.+++...-+...++.|.++.
T Consensus 70 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~g~~~~ 107 (250)
T 2c4n_A 70 TSAMATADFLR--RQEGKKAYVVGEGALIHELYKAGFTIT 107 (250)
T ss_dssp EHHHHHHHHHH--TSSCCEEEEECCTHHHHHHHHTTCEEC
T ss_pred cHHHHHHHHHH--hcCCCEEEEEcCHHHHHHHHHcCCccc
Confidence 11100122322 223467788888888888888887765
No 186
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=81.83 E-value=2.8 Score=29.93 Aligned_cols=86 Identities=14% Similarity=0.106 Sum_probs=58.6
Q ss_pred HHHHHhhhhccCCCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcC
Q 032013 8 KNEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~g 87 (149)
++++..+.....+. ..|++|..|.-+++ +...+.|+.+...|-.++++=|++... ...+.+..+
T Consensus 54 ~~E~~~il~~i~~~-~vi~Ld~~Gk~~sS--------------~~fA~~l~~~~~~g~~i~FvIGG~~Gl-~~~v~~rA~ 117 (155)
T 1ns5_A 54 DKEGEQMLAAAGKN-RIVTLDIPGKPWDT--------------PQLAAELERWKLDGRDVSLLIGGPEGL-SPACKAAAE 117 (155)
T ss_dssp HHHHHHHHHHHTTS-EEEEEEEEEECCCH--------------HHHHHHHHHHHHHCSCEEEEECBTTBC-CHHHHHHCS
T ss_pred HHHHHHHHHhcCCC-cEEEEcCCCCcCCH--------------HHHHHHHHHHHhcCCeEEEEEECCCCC-CHHHHHhhC
Confidence 34454444333333 58999999999973 467788888888887788888888665 456666654
Q ss_pred CCCCcccccccCCChhHHHHHHhh
Q 032013 88 IHSMFVPMVRLSCCIMCIIFFLFF 111 (149)
Q Consensus 88 l~~~f~~~~~~~p~p~~~i~~~~~ 111 (149)
. .++.....=||++..+.+.++
T Consensus 118 ~--~lSlS~mT~pHql~RliL~EQ 139 (155)
T 1ns5_A 118 Q--SWSLSALTLPHPLVRVLVAES 139 (155)
T ss_dssp E--EECCCSSCCCHHHHHHHHHHH
T ss_pred c--eEEccCCCCcHHHHHHHHHHH
Confidence 2 244445667999998887643
No 187
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=81.03 E-value=4.8 Score=29.04 Aligned_cols=87 Identities=7% Similarity=0.023 Sum_probs=58.1
Q ss_pred HHHHHhhhhccCCCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCC-ceEEEEeCCCchHHHHHHHHHc
Q 032013 8 KNEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKG-IHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~G-i~i~IaT~~~~~~i~~~~l~~~ 86 (149)
++++..+.....+.-..|++|..|..+++ +...+.|+.+...| -.++++=|++... ...+.+..
T Consensus 57 ~~E~~~il~~i~~~~~vI~LD~~Gk~~sS--------------~~fA~~l~~~~~~G~~~i~FvIGGa~Gl-~~~v~~rA 121 (167)
T 1to0_A 57 DKEGDRILSKISPDAHVIALAIEGKMKTS--------------EELADTIDKLATYGKSKVTFVIGGSLGL-SDTVMKRA 121 (167)
T ss_dssp HHHHHHHHTTSCTTSEEEEEEEEEEECCH--------------HHHHHHHHHHHTTTCCEEEEEECCSSCC-CHHHHHHC
T ss_pred HHHHHHHHhhcCCCCEEEEEcCCCCcCCH--------------HHHHHHHHHHHhcCCceEEEEEECCCCC-CHHHHHhh
Confidence 34454443332222237999999999973 46778888888887 5688888888665 45666665
Q ss_pred CCCCCcccccccCCChhHHHHHHhh
Q 032013 87 GIHSMFVPMVRLSCCIMCIIFFLFF 111 (149)
Q Consensus 87 gl~~~f~~~~~~~p~p~~~i~~~~~ 111 (149)
+. .++.....=||++..+.+.++
T Consensus 122 ~~--~lSlS~mTfpHqL~RliL~EQ 144 (167)
T 1to0_A 122 DE--KLSFSKMTFPHQLMRLILVEQ 144 (167)
T ss_dssp SE--EEESCSSCCCHHHHHHHHHHH
T ss_pred Cc--EEEccCCCCcHHHHHHHHHHH
Confidence 43 244445668999998888643
No 188
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=77.99 E-value=1.3 Score=37.94 Aligned_cols=39 Identities=26% Similarity=0.245 Sum_probs=24.7
Q ss_pred CCCccEEEEecCCccccccccccccCCCCccCcc--HHHHHHHHHHCCce
Q 032013 19 ENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPH--AKGILEALKEKGIH 66 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg--~~e~L~~Lk~~Gi~ 66 (149)
...++++-||+|+||..... +.++. -.-+.++|.+.|||
T Consensus 62 L~~I~~iGFDmDyTLa~Y~~---------~~~e~L~y~~~~~~LV~~gYP 102 (555)
T 2jc9_A 62 MEKIKCFGFDMDYTLAVYKS---------PEYESLGFELTVERLVSIGYP 102 (555)
T ss_dssp GGGCCEEEECTBTTTBCBCT---------THHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCCEEEECCcccccccCc---------HHHHHHHHHHHHHHHHHcCCC
Confidence 44589999999999998411 11222 12345666667777
No 189
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=77.14 E-value=12 Score=24.16 Aligned_cols=55 Identities=18% Similarity=0.210 Sum_probs=35.4
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
..++++++|++-. + ....++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 48 ~~~dlvi~d~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l 104 (143)
T 3jte_A 48 NSIDVVITDMKMP--K---------------LSGMDILREIKKITPHMAVIILTGHGDLD-NAILAMKEGAFEYL 104 (143)
T ss_dssp TTCCEEEEESCCS--S---------------SCHHHHHHHHHHHCTTCEEEEEECTTCHH-HHHHHHHTTCSEEE
T ss_pred CCCCEEEEeCCCC--C---------------CcHHHHHHHHHHhCCCCeEEEEECCCCHH-HHHHHHHhCcceeE
Confidence 4588899887621 1 1234677777664 68999999887765 34445556765543
No 190
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=75.92 E-value=3.1 Score=32.18 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=34.0
Q ss_pred ccCccHHHHHHHHH-HC----------CceEEEEeCCCchHHHHHHHHHcCCCC
Q 032013 48 YLYPHAKGILEALK-EK----------GIHVAVASRSPAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk-~~----------Gi~i~IaT~~~~~~i~~~~l~~~gl~~ 90 (149)
.+.+...+.+.++. ++ |++++++||++... +..+++.+|++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~-l~~~~~~~gld~ 95 (335)
T 3n28_A 43 YLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSE-HETILKALELDY 95 (335)
T ss_dssp CCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHH-HHHHHHHHTCEE
T ss_pred CCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHH-HHHHHHHcCCCE
Confidence 35566777777776 44 89999999999998 699999999865
No 191
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=75.68 E-value=1.1 Score=36.40 Aligned_cols=15 Identities=33% Similarity=0.204 Sum_probs=12.5
Q ss_pred ccEEEEecCCccccc
Q 032013 22 PRLVVFDLDYTLWPF 36 (149)
Q Consensus 22 ~k~vifDlDGTLld~ 36 (149)
-+..+||+|||+|.+
T Consensus 40 ~~~AVFD~DgTl~~~ 54 (385)
T 4gxt_A 40 KPFAVFDWDNTSIIG 54 (385)
T ss_dssp EEEEEECCTTTTEES
T ss_pred CCEEEEcCCCCeecc
Confidence 368999999999953
No 192
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=75.37 E-value=4.8 Score=31.45 Aligned_cols=38 Identities=18% Similarity=0.392 Sum_probs=29.8
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~g 87 (149)
+.|.+.++++.+++.|+++.+.||..... ....+...|
T Consensus 155 l~~~l~~ll~~~~~~g~~i~l~TNG~~~e-~l~~L~~~g 192 (342)
T 2yx0_A 155 LYPYMGDLVEEFHKRGFTTFIVTNGTIPE-RLEEMIKED 192 (342)
T ss_dssp GSTTHHHHHHHHHHTTCEEEEEECSCCHH-HHHHHHHTT
T ss_pred chhhHHHHHHHHHHCCCcEEEEcCCCcHH-HHHHHHhcC
Confidence 34578899999999999999999998765 345555554
No 193
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=74.60 E-value=1.6 Score=32.43 Aligned_cols=41 Identities=10% Similarity=-0.162 Sum_probs=31.3
Q ss_pred CCChhHHHHHH--hhCCCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 99 SCCIMCIIFFL--FFFSISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 99 ~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.+++.+.-++. .+++++++++|-|+.|++..+..||+.+.+
T Consensus 161 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~ 203 (244)
T 1s2o_A 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV 203 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE
Confidence 45555555555 556779999999999999999999875443
No 194
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=73.11 E-value=3.6 Score=29.63 Aligned_cols=87 Identities=14% Similarity=0.070 Sum_probs=56.1
Q ss_pred HHHHHhhhhccCCCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcC
Q 032013 8 KNEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~g 87 (149)
++++..+.....+.-..|++|..|..+++ +...+.|+.+...|-.++++=|++... ...+.++.+
T Consensus 52 ~~E~~~il~~i~~~~~vI~LD~~Gk~~sS--------------~~fA~~l~~~~~~G~~i~FvIGGa~Gl-~~~v~~rAd 116 (163)
T 1o6d_A 52 RKETEDLTNRILPGSFVMVMDKRGEEVSS--------------EEFADFLKDLEMKGKDITILIGGPYGL-NEEIFAKAH 116 (163)
T ss_dssp HHHHHHHHTTCCTTCEEEEEEEEEEECCH--------------HHHHHHHHHHHHHTCCEEEEECCTTCC-CGGGGGGCS
T ss_pred HHHHHHHHHhcCCCCEEEEEcCCCCcCCH--------------HHHHHHHHHHHhcCCeEEEEEECCCCC-CHHHHHhhC
Confidence 44555554433333237999999999973 466788888888886788888887543 334444333
Q ss_pred CCCCcccccccCCChhHHHHHHhh
Q 032013 88 IHSMFVPMVRLSCCIMCIIFFLFF 111 (149)
Q Consensus 88 l~~~f~~~~~~~p~p~~~i~~~~~ 111 (149)
. .++.....=||++..+.+.++
T Consensus 117 ~--~lSlS~mTfpHqL~RliL~EQ 138 (163)
T 1o6d_A 117 R--VFSLSKMTFTHGMTVLIVLEQ 138 (163)
T ss_dssp E--EEECCSSCCCHHHHHHHHHHH
T ss_pred c--eEEccCCCCcHHHHHHHHHHH
Confidence 2 234445667899988887643
No 195
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=73.02 E-value=2.4 Score=31.45 Aligned_cols=92 Identities=11% Similarity=-0.023 Sum_probs=64.7
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHH--HHHHHH-cCCCCCcccc------cccCCChhHHHHHHhhCCCcce
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIA--KTFLHK-LGIHSMFVPM------VRLSCCIMCIIFFLFFFSISAF 117 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~--~~~l~~-~gl~~~f~~~------~~~~p~p~~~i~~~~~~~~~~~ 117 (149)
...+|++.++++.|+ +|+++ ++||++... . ...+.. .++..+|+.. ...||+|..+.++...++|++|
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~-~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 205 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATL-PGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREMFPGEEL 205 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEE-EETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHSTTCEE
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccc-cCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHhCCcccE
Confidence 357799999999999 89999 999987643 2 111111 1222233322 2568888554444433889999
Q ss_pred EEEeehH-hHHHHHHHhCCchhhhh
Q 032013 118 ILFVDLF-CFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 118 l~~eDs~-~gi~aa~~ag~~~~~~~ 141 (149)
+++.|++ ++|.+|++|||+++.+.
T Consensus 206 ~~VGD~~~~Di~~A~~aG~~~i~v~ 230 (263)
T 1zjj_A 206 WMVGDRLDTDIAFAKKFGMKAIMVL 230 (263)
T ss_dssp EEEESCTTTHHHHHHHTTCEEEEES
T ss_pred EEECCChHHHHHHHHHcCCeEEEEC
Confidence 9999996 99999999999988654
No 196
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=73.00 E-value=2.4 Score=31.42 Aligned_cols=41 Identities=10% Similarity=-0.205 Sum_probs=32.0
Q ss_pred CCChhHHHHHHh--hCCC--cceEEEeehHhHHHHHHHhCCchhh
Q 032013 99 SCCIMCIIFFLF--FFSI--SAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 99 ~p~p~~~i~~~~--~~~~--~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.+++.+.-++.. ++++ +++++|=||.|.+..++.||+.+.+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 219 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV 219 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe
Confidence 555666666664 4555 8999999999999999999987554
No 197
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=72.22 E-value=12 Score=26.96 Aligned_cols=77 Identities=14% Similarity=0.099 Sum_probs=47.3
Q ss_pred Ccc-HHHHHHHHHHCCceEEEEeCCCc----hHHHHHHHHHcCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehH
Q 032013 50 YPH-AKGILEALKEKGIHVAVASRSPA----PDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLF 124 (149)
Q Consensus 50 ~pg-~~e~L~~Lk~~Gi~i~IaT~~~~----~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~ 124 (149)
.++ +.++++.+++.|+++.+.||+.. +. +..+++. +.. + .+..-.+++ ..+-... +.. +++..
T Consensus 83 ~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~-~~~l~~~--~~~-v-~isld~~~~--~~~~~~~-~~~----~~~~~ 150 (245)
T 3c8f_A 83 QAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPV-IDELLEV--TDL-V-MLDLKQMND--EIHQNLV-GVS----NHRTL 150 (245)
T ss_dssp GHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHH-HHHHHHT--CSE-E-EEECCCSSH--HHHHHHH-SSC----SHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHH-HHHHHHh--CCE-E-EEeCCCCCH--HHhhhcc-CCC----HHHHH
Confidence 355 57999999999999999998843 33 3444442 221 1 112233445 5555432 111 37778
Q ss_pred hHHHHHHHhCCchh
Q 032013 125 CFMYAAAYVGCDLY 138 (149)
Q Consensus 125 ~gi~aa~~ag~~~~ 138 (149)
.++..++++|.++.
T Consensus 151 ~~i~~l~~~g~~v~ 164 (245)
T 3c8f_A 151 EFAKYLANKNVKVW 164 (245)
T ss_dssp HHHHHHHHHTCCEE
T ss_pred HHHHHHHhcCCEEE
Confidence 88888888887653
No 198
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=72.16 E-value=0.18 Score=37.07 Aligned_cols=92 Identities=14% Similarity=-0.010 Sum_probs=69.8
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccc---------ccccCCChhHHHHHH--hhCCCcc
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVP---------MVRLSCCIMCIIFFL--FFFSISA 116 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~---------~~~~~p~p~~~i~~~--~~~~~~~ 116 (149)
..+|++.++++.|+ +|+++ ++||.+... ....+...++..+|+. ....||+|.....+. .+++|++
T Consensus 122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 198 (259)
T 2ho4_A 122 FHYQLLNQAFRLLL-DGAPL-IAIHKARYY-KRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEE 198 (259)
T ss_dssp CBHHHHHHHHHHHH-TTCCE-EESCCCSEE-EETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGG
T ss_pred CCHHHHHHHHHHHH-CCCEE-EEECCCCcC-cccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHH
Confidence 36789999999999 89999 999987665 3444455666665541 123578885554444 5677899
Q ss_pred eEEEeehH-hHHHHHHHhCCchhhhhh
Q 032013 117 FILFVDLF-CFMYAAAYVGCDLYVYKR 142 (149)
Q Consensus 117 ~l~~eDs~-~gi~aa~~ag~~~~~~~~ 142 (149)
|++|+|++ ++|.+|++||++++.+.+
T Consensus 199 ~~~iGD~~~~Di~~a~~aG~~~i~v~~ 225 (259)
T 2ho4_A 199 AVMIGDDCRDDVDGAQNIGMLGILVKT 225 (259)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEESS
T ss_pred EEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 99999999 999999999999987643
No 199
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=71.82 E-value=13 Score=24.17 Aligned_cols=54 Identities=11% Similarity=0.214 Sum_probs=35.8
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH----CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~----~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+.++++|++-. + ....++++++++ .+.+++++|+..... .....-..|..+|+
T Consensus 51 ~~dlii~D~~l~--~---------------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~-~~~~~~~~ga~~~l 108 (144)
T 3kht_A 51 KYDLIILDIGLP--I---------------ANGFEVMSAVRKPGANQHTPIVILTDNVSDD-RAKQCMAAGASSVV 108 (144)
T ss_dssp CCSEEEECTTCG--G---------------GCHHHHHHHHHSSSTTTTCCEEEEETTCCHH-HHHHHHHTTCSEEE
T ss_pred CCCEEEEeCCCC--C---------------CCHHHHHHHHHhcccccCCCEEEEeCCCCHH-HHHHHHHcCCCEEE
Confidence 477888887621 1 133578888887 468999999987766 34444556766543
No 200
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=71.32 E-value=12 Score=29.94 Aligned_cols=85 Identities=11% Similarity=-0.019 Sum_probs=46.8
Q ss_pred HHHHHHHHHC--CceEE-EEeCCCchHHHHHHHHHcCCCCCcc-cccccCCChh---HHHHHH-----hhCCCcceEEEe
Q 032013 54 KGILEALKEK--GIHVA-VASRSPAPDIAKTFLHKLGIHSMFV-PMVRLSCCIM---CIIFFL-----FFFSISAFILFV 121 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~-IaT~~~~~~i~~~~l~~~gl~~~f~-~~~~~~p~p~---~~i~~~-----~~~~~~~~l~~e 121 (149)
..+++.|+++ ++.+. ++||..+.. ....++.+++..-++ .+....-.+. +..... ....|.-.++..
T Consensus 44 a~li~~l~~~~~~~~~~~~~tG~h~~m-~~~~~~~~~i~~~~~l~v~~~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~g 122 (403)
T 3ot5_A 44 APLVLALEKEPETFESTVVITAQHREM-LDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHG 122 (403)
T ss_dssp HHHHHHHHTCTTTEEEEEEECC------CHHHHHHTTCCCSEECCCCC-CCCHHHHHHHHHHHHHHHHHHHCCSEEEEET
T ss_pred HHHHHHHHhCCCCCcEEEEEecCcHHH-HHHHHHhcCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 4678888887 57754 677766444 567788899843222 1111111221 122221 336777777777
Q ss_pred ehHh---HHHHHHHhCCchhh
Q 032013 122 DLFC---FMYAAAYVGCDLYV 139 (149)
Q Consensus 122 Ds~~---gi~aa~~ag~~~~~ 139 (149)
|... +..+|+..|++++.
T Consensus 123 d~~~~l~~~laA~~~~IPv~h 143 (403)
T 3ot5_A 123 DTTTSFAAGLATFYQQKMLGH 143 (403)
T ss_dssp TCHHHHHHHHHHHHTTCEEEE
T ss_pred CchhHHHHHHHHHHhCCCEEE
Confidence 7433 56788888998754
No 201
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=70.68 E-value=19 Score=23.29 Aligned_cols=54 Identities=11% Similarity=0.134 Sum_probs=35.1
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+.++++|++- -+ ..-.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 48 ~~dlvl~D~~l--p~---------------~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~-~~~~~~~~ga~~~l 105 (136)
T 3t6k_A 48 LPDALICDVLL--PG---------------IDGYTLCKRVRQHPLTKTLPILMLTAQGDIS-AKIAGFEAGANDYL 105 (136)
T ss_dssp CCSEEEEESCC--SS---------------SCHHHHHHHHHHSGGGTTCCEEEEECTTCHH-HHHHHHHHTCSEEE
T ss_pred CCCEEEEeCCC--CC---------------CCHHHHHHHHHcCCCcCCccEEEEecCCCHH-HHHHHHhcCcceEE
Confidence 47888888752 11 1235778888764 67899999987766 34444556766554
No 202
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=70.66 E-value=15 Score=23.67 Aligned_cols=53 Identities=21% Similarity=0.166 Sum_probs=34.9
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+.++++|+ +-+ ....++++.+++. +.+++++|+..... ........|..+|+
T Consensus 48 ~~dlvi~d~---~~~---------------~~g~~~~~~l~~~~~~~pii~ls~~~~~~-~~~~~~~~g~~~~l 102 (142)
T 2qxy_A 48 KIDLVFVDV---FEG---------------EESLNLIRRIREEFPDTKVAVLSAYVDKD-LIINSVKAGAVDYI 102 (142)
T ss_dssp CCSEEEEEC---TTT---------------HHHHHHHHHHHHHCTTCEEEEEESCCCHH-HHHHHHHHTCSCEE
T ss_pred CCCEEEEeC---CCC---------------CcHHHHHHHHHHHCCCCCEEEEECCCCHH-HHHHHHHCCcceeE
Confidence 478888887 222 1234677777764 68999999887766 34555567776654
No 203
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=70.55 E-value=14 Score=24.53 Aligned_cols=54 Identities=11% Similarity=0.014 Sum_probs=34.8
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+.++++|++-. + ....++++++++. +.+++++|+..... ........|..+|+
T Consensus 83 ~~dliilD~~l~--~---------------~~g~~~~~~lr~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l 138 (157)
T 3hzh_A 83 NIDIVTLXITMP--K---------------MDGITCLSNIMEFDKNARVIMISALGKEQ-LVKDCLIKGAKTFI 138 (157)
T ss_dssp GCCEEEECSSCS--S---------------SCHHHHHHHHHHHCTTCCEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred CCCEEEEeccCC--C---------------ccHHHHHHHHHhhCCCCcEEEEeccCcHH-HHHHHHHcCCCEEE
Confidence 467888887521 1 1234677777664 58999999887766 35555566765543
No 204
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=69.92 E-value=3.2 Score=30.54 Aligned_cols=93 Identities=9% Similarity=-0.051 Sum_probs=64.0
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHH-HHH-HHHHcCCCCCcccc------cccCCChhHHHHHH--hhCCCcc
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDI-AKT-FLHKLGIHSMFVPM------VRLSCCIMCIIFFL--FFFSISA 116 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i-~~~-~l~~~gl~~~f~~~------~~~~p~p~~~i~~~--~~~~~~~ 116 (149)
..++|++.++|+.|+ +|+++ |+||++.... ... ..+..++..+|+.+ ...||+|..+..+. .+++|++
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 202 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQ 202 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGG
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHH
Confidence 357899999999997 89998 8999876210 011 01111222233322 34688885544443 5678899
Q ss_pred eEEEeeh-HhHHHHHHHhCCchhhhh
Q 032013 117 FILFVDL-FCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 117 ~l~~eDs-~~gi~aa~~ag~~~~~~~ 141 (149)
|++++|+ .++|.+|++|||+++.+.
T Consensus 203 ~~~vGD~~~~Di~~a~~aG~~~i~v~ 228 (264)
T 1yv9_A 203 VIMVGDNYETDIQSGIQNGIDSLLVT 228 (264)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred EEEECCCcHHHHHHHHHcCCcEEEEC
Confidence 9999999 599999999999988654
No 205
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=69.54 E-value=13 Score=28.70 Aligned_cols=58 Identities=5% Similarity=0.057 Sum_probs=47.0
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
-|.++.=+-|+.+.. ..+.+.+-+..|++.|+++++++|.. .. +...++++|+...|.
T Consensus 36 ~k~iVIKiGGs~l~~------------~~~~l~~dIa~L~~~G~~vVlVhgGg-~~-i~~~l~~lg~~~~~~ 93 (279)
T 3l86_A 36 KDIIVIKIGGVASQQ------------LSGDFLSQIKNWQDAGKQLVIVHGGG-FA-INKLMEENQVPVKKI 93 (279)
T ss_dssp CCEEEEEECTTGGGS------------CCHHHHHHHHHHHHTTCEEEEEECCH-HH-HHHHHHHTTCCCCEE
T ss_pred CceEEEEEChHHHHh------------HHHHHHHHHHHHHhCCCcEEEEECCH-HH-HHHHHHHcCCCCccC
Confidence 368999999999961 24677888999999999999999984 44 588899999886554
No 206
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=69.15 E-value=17 Score=24.30 Aligned_cols=60 Identities=17% Similarity=0.055 Sum_probs=41.4
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
.++.+++|+-++-.= ++ .-..-..++.++++++|.++.++.-+ .. +...++..|+.+.+.
T Consensus 63 ~~~~vvlDls~v~~i-----Ds-----sgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~~ 122 (143)
T 3llo_A 63 NIHTVILDFTQVNFM-----DS-----VGVKTLAGIVKEYGDVGIYVYLAGCS--AQ-VVNDLTSNRFFENPA 122 (143)
T ss_dssp CCSEEEEECTTCCCC-----CH-----HHHHHHHHHHHHHHTTTCEEEEESCC--HH-HHHHHHHTTTTSSGG
T ss_pred CceEEEEECCCCccc-----cH-----HHHHHHHHHHHHHHHCCCEEEEEeCC--HH-HHHHHHhCCCeeccC
Confidence 467899999886442 11 12223447778889999999987533 44 588999999987664
No 207
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=68.08 E-value=22 Score=23.46 Aligned_cols=54 Identities=17% Similarity=0.165 Sum_probs=35.4
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+.++++|++-. + ....++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 51 ~~dlii~D~~l~--~---------------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~-~~~~~~~~g~~~~l 108 (154)
T 3gt7_A 51 RPDLIISDVLMP--E---------------MDGYALCRWLKGQPDLRTIPVILLTILSDPR-DVVRSLECGADDFI 108 (154)
T ss_dssp CCSEEEEESCCS--S---------------SCHHHHHHHHHHSTTTTTSCEEEEECCCSHH-HHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCCC--C---------------CCHHHHHHHHHhCCCcCCCCEEEEECCCChH-HHHHHHHCCCCEEE
Confidence 478888887521 1 1235788888874 68899999887766 34444556765543
No 208
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=67.62 E-value=19 Score=22.76 Aligned_cols=55 Identities=22% Similarity=0.314 Sum_probs=35.2
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
..+.++++|++-. + ....++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 54 ~~~dlvi~d~~~~--~---------------~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~-~~~~~~~~g~~~~l 112 (140)
T 1k68_A 54 SRPDLILLXLNLP--K---------------KDGREVLAEIKSDPTLKRIPVVVLSTSINED-DIFHSYDLHVNCYI 112 (140)
T ss_dssp CCCSEEEECSSCS--S---------------SCHHHHHHHHHHSTTGGGSCEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred CCCcEEEEecCCC--c---------------ccHHHHHHHHHcCcccccccEEEEecCCcHH-HHHHHHHhchhhee
Confidence 4578888886521 1 1234788888874 58899999887665 34444456765543
No 209
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=67.34 E-value=13 Score=24.52 Aligned_cols=60 Identities=12% Similarity=-0.013 Sum_probs=41.7
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
.++.+++|+.++=.= ++. -..-..++.+.++++|.++.++.-+ +. +...++..|+...|.
T Consensus 51 ~~~~vvlDls~V~~i-----DSs-----Gl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~~ 110 (125)
T 2ka5_A 51 GYNKIFLVLSDVESI-----DSF-----SLGVIVNILKSISSSGGFFALVSPN--EK-VERVLSLTNLDRIVK 110 (125)
T ss_dssp TCCEEEEECTTCSCC-----CHH-----HHHHHHHHHHHHHHHTCEEEEECCC--HH-HHHHHHHTTSTTTSE
T ss_pred CCCEEEEECCCCCEE-----cHH-----HHHHHHHHHHHHHHcCCEEEEEeCC--HH-HHHHHHHcCCCceEE
Confidence 367899999987542 111 1223346778889999999887543 45 689999999988763
No 210
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=64.94 E-value=23 Score=22.57 Aligned_cols=54 Identities=19% Similarity=0.199 Sum_probs=35.0
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++|++-. + ....++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 51 ~~dlvi~d~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 106 (137)
T 3hdg_A 51 APDVIITDIRMP--K---------------LGGLEMLDRIKAGGAKPYVIVISAFSEMK-YFIKAIELGVHLFL 106 (137)
T ss_dssp CCSEEEECSSCS--S---------------SCHHHHHHHHHHTTCCCEEEECCCCCCHH-HHHHHHHHCCSEEC
T ss_pred CCCEEEEeCCCC--C---------------CCHHHHHHHHHhcCCCCcEEEEecCcChH-HHHHHHhCCcceeE
Confidence 378888887621 1 1235777888775 57889999887765 34445566766543
No 211
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=64.89 E-value=12 Score=24.85 Aligned_cols=68 Identities=13% Similarity=0.248 Sum_probs=43.2
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLS 99 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~ 99 (149)
..++.+++|+-++-.= ++ .-..-..++.++++++|.++.++.-+ .. +...++..|+.+.+...+.+.
T Consensus 47 ~~~~~vvlDls~v~~i-----Ds-----sgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~~~~~i~~ 113 (130)
T 4dgh_A 47 ETPQILILRLKWVPFM-----DI-----TGIQTLEEMIQSFHKRGIKVLISGAN--SR-VSQKLVKAGIVKLVGEQNVYP 113 (130)
T ss_dssp SCCSEEEEECTTCCCC-----CH-----HHHHHHHHHHHHHHTTTCEEEEECCC--HH-HHHHHHHTTHHHHHCGGGEES
T ss_pred cCCCEEEEECCCCCcc-----cH-----HHHHHHHHHHHHHHHCCCEEEEEcCC--HH-HHHHHHHcCChhhcCcccccC
Confidence 3467899999886442 11 12223447778889999999877543 44 578888888765554333443
Q ss_pred C
Q 032013 100 C 100 (149)
Q Consensus 100 p 100 (149)
.
T Consensus 114 s 114 (130)
T 4dgh_A 114 V 114 (130)
T ss_dssp S
T ss_pred C
Confidence 3
No 212
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=64.50 E-value=8.7 Score=28.68 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=46.6
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHH--------HHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILE--------ALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~--------~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.++++|+||+||||+|+. +.|...+.+. .+++.|++++++||++... +...++.+|+.
T Consensus 20 ~~~kliifDlDGTLlds~-----------i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~-~~~~~~~~g~~ 85 (289)
T 3gyg_A 20 HPQYIVFCDFDETYFPHT-----------IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIES-ILDKMGRGKFR 85 (289)
T ss_dssp SCSEEEEEETBTTTBCSS-----------CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHH-HHHHHHHTTCC
T ss_pred CCCeEEEEECCCCCcCCC-----------CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHH-HHHHHHhhccC
Confidence 357899999999999841 3455566665 5578899999999999998 68899988874
No 213
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=63.57 E-value=11 Score=23.59 Aligned_cols=57 Identities=18% Similarity=0.180 Sum_probs=39.3
Q ss_pred cEEEEecCCccc-cccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 23 RLVVFDLDYTLW-PFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 23 k~vifDlDGTLl-d~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
+.+++|+-++=. | +. -..-..++.++++++|.++.++.-+ +. +...++..|+.+.|.
T Consensus 45 ~~vvlDls~v~~iD------ss-----gl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~~ 102 (110)
T 1sbo_A 45 KKIVLDLSSVSYMD------SA-----GLGTLVVILKDAKINGKEFILSSLK--ES-ISRILKLTHLDKIFK 102 (110)
T ss_dssp SEEEEECTTCCCBC------HH-----HHHHHHHHHHHHHHTTCEEEEESCC--HH-HHHHHHHTTCGGGSC
T ss_pred cEEEEECCCCcEEc------cH-----HHHHHHHHHHHHHHcCCEEEEEeCC--HH-HHHHHHHhCccceee
Confidence 678999988743 3 11 1223346678888999998875543 45 588999999987764
No 214
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=63.50 E-value=5.8 Score=27.01 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=30.1
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.|...++.++++++|+.++.+|..+... ....++..++.
T Consensus 49 ~~~l~~~~~~~~~~~v~vv~vs~d~~~~-~~~~~~~~~~~ 87 (161)
T 3drn_A 49 ASAFRDNWDLLKDYDVVVIGVSSDDINS-HKRFKEKYKLP 87 (161)
T ss_dssp HHHHHHTHHHHHTTCEEEEEEESCCHHH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCCHHH-HHHHHHHhCCC
Confidence 3455666777777899999998877777 68888888875
No 215
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=62.62 E-value=28 Score=22.45 Aligned_cols=54 Identities=17% Similarity=0.305 Sum_probs=35.8
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH----CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~----~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+.++++|++-. + ....++++.+++ .+.+++++|+..... .....-..|..+|+
T Consensus 52 ~~dlii~d~~l~--~---------------~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~-~~~~~~~~g~~~~l 109 (147)
T 2zay_A 52 HPHLIITEANMP--K---------------ISGMDLFNSLKKNPQTASIPVIALSGRATAK-EEAQLLDMGFIDFI 109 (147)
T ss_dssp CCSEEEEESCCS--S---------------SCHHHHHHHHHTSTTTTTSCEEEEESSCCHH-HHHHHHHHTCSEEE
T ss_pred CCCEEEEcCCCC--C---------------CCHHHHHHHHHcCcccCCCCEEEEeCCCCHH-HHHHHHhCCCCEEE
Confidence 378888887531 1 123578888886 478999999987766 34444567776554
No 216
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=62.56 E-value=24 Score=22.11 Aligned_cols=54 Identities=11% Similarity=0.208 Sum_probs=33.9
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~-Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.|.++++|+.- -+ ..-.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 46 ~~dlii~D~~~--p~---------------~~g~~~~~~lr~~~~~~ii~~t~~~~~~-~~~~~~~~ga~~~l 100 (120)
T 3f6p_A 46 QPDLILLDIML--PN---------------KDGVEVCREVRKKYDMPIIMLTAKDSEI-DKVIGLEIGADDYV 100 (120)
T ss_dssp CCSEEEEETTS--TT---------------THHHHHHHHHHTTCCSCEEEEEESSCHH-HHHHHHHTTCCEEE
T ss_pred CCCEEEEeCCC--CC---------------CCHHHHHHHHHhcCCCCEEEEECCCChH-HHHHHHhCCcceeE
Confidence 47888888751 11 1234677777654 68899999877665 34444556765554
No 217
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=60.96 E-value=15 Score=25.28 Aligned_cols=86 Identities=8% Similarity=-0.072 Sum_probs=49.9
Q ss_pred ccHHHHHHHHHHC-CceEEEEeCCCc-hHHHHHHHH--HcCCCCCcccccccCCCh-hHHHHHHh--hCCCcceEEEeeh
Q 032013 51 PHAKGILEALKEK-GIHVAVASRSPA-PDIAKTFLH--KLGIHSMFVPMVRLSCCI-MCIIFFLF--FFSISAFILFVDL 123 (149)
Q Consensus 51 pg~~e~L~~Lk~~-Gi~i~IaT~~~~-~~i~~~~l~--~~gl~~~f~~~~~~~p~p-~~~i~~~~--~~~~~~~l~~eDs 123 (149)
.|...+++.++.. ++++.++.+.+. .. .+...+ ..++.+.+.. .+.-+.. ...+|... .+.|+. .|-.
T Consensus 36 Kg~~~li~a~~~l~~~~l~i~G~~~~~~~-l~~~~~~~~~~l~~~v~~-~g~~~~~e~~~~~~~adi~v~ps~---~e~~ 110 (177)
T 2f9f_A 36 KRIELQLEVFKKLQDEKLYIVGWFSKGDH-AERYARKIMKIAPDNVKF-LGSVSEEELIDLYSRCKGLLCTAK---DEDF 110 (177)
T ss_dssp GTHHHHHHHHHHCTTSCEEEEBCCCTTST-HHHHHHHHHHHSCTTEEE-EESCCHHHHHHHHHHCSEEEECCS---SCCS
T ss_pred cCHHHHHHHHHhCCCcEEEEEecCccHHH-HHHHHHhhhcccCCcEEE-eCCCCHHHHHHHHHhCCEEEeCCC---cCCC
Confidence 4666666666554 788888876554 45 567777 6666544332 2333332 23444432 122211 3556
Q ss_pred HhHHHHHHHhCCchhhhh
Q 032013 124 FCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 124 ~~gi~aa~~ag~~~~~~~ 141 (149)
..-+.-|.++|+++|+..
T Consensus 111 ~~~~~Eama~G~PvI~~~ 128 (177)
T 2f9f_A 111 GLTPIEAMASGKPVIAVN 128 (177)
T ss_dssp CHHHHHHHHTTCCEEEES
T ss_pred ChHHHHHHHcCCcEEEeC
Confidence 667888999999998753
No 218
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A*
Probab=60.70 E-value=13 Score=24.78 Aligned_cols=70 Identities=9% Similarity=0.011 Sum_probs=43.9
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLS 99 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~ 99 (149)
..++.+++|+-++=.= ++ .-..-..++.+.++++|.++.++.-+ .. +...++..|+.+.+...+.+.
T Consensus 50 ~~~~~vvlDls~v~~i-----Ds-----sgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~~~~~i~~ 116 (135)
T 4dgf_A 50 ETPKVFILRMRRVPVI-----DA-----TGMHALWEFQESCEKRGTILLLSGVS--DR-LYGALNRFGFIEALGEERVFD 116 (135)
T ss_dssp SCCSEEEEECTTCSCB-----CH-----HHHHHHHHHHHHHHHHTCEEEEESCC--HH-HHHHHHHHTHHHHHCGGGBCS
T ss_pred CCCcEEEEEcCCCCcc-----CH-----HHHHHHHHHHHHHHHCCCEEEEEcCC--HH-HHHHHHHcCChhhcCccceeC
Confidence 3467788888776432 11 11223346778889999999987543 44 578889888866554444444
Q ss_pred CCh
Q 032013 100 CCI 102 (149)
Q Consensus 100 p~p 102 (149)
...
T Consensus 117 t~~ 119 (135)
T 4dgf_A 117 HID 119 (135)
T ss_dssp SHH
T ss_pred CHH
Confidence 433
No 219
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=60.69 E-value=22 Score=27.39 Aligned_cols=78 Identities=9% Similarity=0.106 Sum_probs=45.9
Q ss_pred ccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehHhHHHHH
Q 032013 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLFCFMYAA 130 (149)
Q Consensus 51 pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa 130 (149)
+.+.++++.+++.++.+.+-++....+ ....+...|+..+... .-.++| .+|-... +.. -+|+....+..+
T Consensus 117 ~~~~~li~~i~~~~~~i~~s~g~l~~e-~l~~L~~ag~~~v~i~--let~~~--~~~~~i~--~~~--~~~~~~~~i~~~ 187 (348)
T 3iix_A 117 DVISDIVKEIKKMGVAVTLSLGEWPRE-YYEKWKEAGADRYLLR--HETANP--VLHRKLR--PDT--SFENRLNCLLTL 187 (348)
T ss_dssp HHHHHHHHHHHTTSCEEEEECCCCCHH-HHHHHHHHTCCEEECC--CBCSCH--HHHHHHS--TTS--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCceEEEecCCCCHH-HHHHHHHhCCCEEeee--eeeCCH--HHHHHhC--CCc--CHHHHHHHHHHH
Confidence 566778888877776666322333344 3556666676543322 223444 5554433 212 678888888888
Q ss_pred HHhCCch
Q 032013 131 AYVGCDL 137 (149)
Q Consensus 131 ~~ag~~~ 137 (149)
+++|.++
T Consensus 188 ~~~Gi~v 194 (348)
T 3iix_A 188 KELGYET 194 (348)
T ss_dssp HHTTCEE
T ss_pred HHhCCee
Confidence 8888764
No 220
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=60.59 E-value=37 Score=26.13 Aligned_cols=82 Identities=10% Similarity=0.015 Sum_probs=49.1
Q ss_pred cCccHHHHHHHHHHCCc--eEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehHhH
Q 032013 49 LYPHAKGILEALKEKGI--HVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLFCF 126 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi--~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~g 126 (149)
+.++..++++.+++.+. .+.+.||...-.-....+...|+...-. ..-..+| ..|-...-.. ..|++...+
T Consensus 79 l~~~l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g~~~v~i--Sld~~~~--~~~~~i~~~~---~~~~~v~~~ 151 (340)
T 1tv8_A 79 MRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINV--SLDAIDD--TLFQSINNRN---IKATTILEQ 151 (340)
T ss_dssp GSTTHHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHTCCEEEE--ECCCSSH--HHHHHHHSSC---CCHHHHHHH
T ss_pred chhhHHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCCCCEEEE--ecCCCCH--HHHHHhhCCC---CCHHHHHHH
Confidence 45678899999999876 8999998875320234455556543211 1223344 4554422111 136777888
Q ss_pred HHHHHHhCCch
Q 032013 127 MYAAAYVGCDL 137 (149)
Q Consensus 127 i~aa~~ag~~~ 137 (149)
|.+++++|.++
T Consensus 152 i~~l~~~g~~v 162 (340)
T 1tv8_A 152 IDYATSIGLNV 162 (340)
T ss_dssp HHHHHHTTCEE
T ss_pred HHHHHHCCCCE
Confidence 88888888643
No 221
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=59.01 E-value=34 Score=22.34 Aligned_cols=54 Identities=11% Similarity=0.086 Sum_probs=33.8
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcC-CCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLG-IHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~g-l~~~f 92 (149)
.+.++++|++-. + ..-.++++++++. ..+++++|+..... .....-..| ..+|+
T Consensus 58 ~~dlvi~D~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~~l 114 (153)
T 3hv2_A 58 EVDLVISAAHLP--Q---------------MDGPTLLARIHQQYPSTTRILLTGDPDLK-LIAKAINEGEIYRYL 114 (153)
T ss_dssp CCSEEEEESCCS--S---------------SCHHHHHHHHHHHCTTSEEEEECCCCCHH-HHHHHHHTTCCSEEE
T ss_pred CCCEEEEeCCCC--c---------------CcHHHHHHHHHhHCCCCeEEEEECCCCHH-HHHHHHhCCCcceEE
Confidence 478888888621 1 1234677777664 68999999887765 344444455 55543
No 222
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=58.34 E-value=19 Score=23.30 Aligned_cols=54 Identities=9% Similarity=0.151 Sum_probs=32.8
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~ 91 (149)
..+.++++|++- -+ ....++++++++. +.+++++|+..... .....-..|..+|
T Consensus 66 ~~~dlvi~D~~l--~~---------------~~g~~~~~~l~~~~~~~~ii~lt~~~~~~-~~~~~~~~ga~~~ 121 (146)
T 4dad_A 66 DAFDILMIDGAA--LD---------------TAELAAIEKLSRLHPGLTCLLVTTDASSQ-TLLDAMRAGVRDV 121 (146)
T ss_dssp TTCSEEEEECTT--CC---------------HHHHHHHHHHHHHCTTCEEEEEESCCCHH-HHHHHHTTTEEEE
T ss_pred CCCCEEEEeCCC--CC---------------ccHHHHHHHHHHhCCCCcEEEEeCCCCHH-HHHHHHHhCCcee
Confidence 347788888752 11 1234677777664 68999999887665 2333334565443
No 223
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=56.52 E-value=6.2 Score=29.92 Aligned_cols=93 Identities=9% Similarity=0.036 Sum_probs=66.3
Q ss_pred CccCccHHHHHHHHHHCCceEEEEeCCCchHHH--H-HHHHHcC-CCCCccc------ccccCCChhHHHHHH--hhCCC
Q 032013 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIA--K-TFLHKLG-IHSMFVP------MVRLSCCIMCIIFFL--FFFSI 114 (149)
Q Consensus 47 ~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~--~-~~l~~~g-l~~~f~~------~~~~~p~p~~~i~~~--~~~~~ 114 (149)
...+|++.++++.|+++|+ ++++||++... . . ..++..| +..+|+. ....||+|...-++. .+++|
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~-~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~ 232 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWH-PLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDP 232 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEE-ECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCG
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccc-cCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCCh
Confidence 3567999999999999999 99999987543 1 1 1111112 2222322 235688885555554 55778
Q ss_pred cceEEEeehH-hHHHHHHHhCCchhhhh
Q 032013 115 SAFILFVDLF-CFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 115 ~~~l~~eDs~-~gi~aa~~ag~~~~~~~ 141 (149)
++|++|.|++ ++|.+|++||++++.+.
T Consensus 233 ~e~l~vGD~~~~Di~~a~~aG~~~i~v~ 260 (306)
T 2oyc_A 233 ARTLMVGDRLETDILFGHRCGMTTVLTL 260 (306)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEES
T ss_pred HHEEEECCCchHHHHHHHHCCCeEEEEC
Confidence 9999999996 99999999999998754
No 224
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=56.23 E-value=17 Score=22.96 Aligned_cols=38 Identities=24% Similarity=0.350 Sum_probs=27.2
Q ss_pred HHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+++++++++ +.+++++|+..... .....-..|..+|+
T Consensus 62 ~~~~~~l~~~~~~~~~pii~~s~~~~~~-~~~~~~~~Ga~~~l 103 (122)
T 3gl9_A 62 FTVLKKLQEKEEWKRIPVIVLTAKGGEE-DESLALSLGARKVM 103 (122)
T ss_dssp HHHHHHHHTSTTTTTSCEEEEESCCSHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcccccCCCEEEEecCCchH-HHHHHHhcChhhhc
Confidence 5788888764 68999999987766 45555567776554
No 225
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=56.01 E-value=19 Score=24.27 Aligned_cols=38 Identities=11% Similarity=0.213 Sum_probs=27.7
Q ss_pred HHHHHHHHH----CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~----~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++|+ ..+|++++|+..... ......+.|..+|+
T Consensus 73 ~el~~~ir~~~~~~~ipvI~lTa~~~~~-~~~~~~~~Ga~~yl 114 (134)
T 3to5_A 73 IDLLKNIRADEELKHLPVLMITAEAKRE-QIIEAAQAGVNGYI 114 (134)
T ss_dssp HHHHHHHHHSTTTTTCCEEEEESSCCHH-HHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCCCCCCeEEEEECCCCHH-HHHHHHHCCCCEEE
Confidence 478888876 368999999988776 45555567877654
No 226
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=55.29 E-value=38 Score=21.57 Aligned_cols=55 Identities=13% Similarity=0.224 Sum_probs=35.2
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH------CCceEEEEeCCCchHHHHHHHHHcC-CCCCc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE------KGIHVAVASRSPAPDIAKTFLHKLG-IHSMF 92 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~------~Gi~i~IaT~~~~~~i~~~~l~~~g-l~~~f 92 (149)
..+.++++|++-- + ....++++++++ ...+++++|+..... ........| ..+|+
T Consensus 59 ~~~dlvi~D~~l~--~---------------~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~-~~~~~~~~g~~~~~l 120 (146)
T 3ilh_A 59 RWPSIICIDINMP--G---------------INGWELIDLFKQHFQPMKNKSIVCLLSSSLDPR-DQAKAEASDWVDYYV 120 (146)
T ss_dssp CCCSEEEEESSCS--S---------------SCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHH-HHHHHHHCSSCCEEE
T ss_pred CCCCEEEEcCCCC--C---------------CCHHHHHHHHHHhhhhccCCCeEEEEeCCCChH-HHHHHHhcCCcceee
Confidence 4578899887521 1 123567777777 578899999887766 344444555 55443
No 227
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=54.80 E-value=52 Score=23.09 Aligned_cols=54 Identities=6% Similarity=0.039 Sum_probs=34.4
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH------CCceEEEEeCCC-chHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE------KGIHVAVASRSP-APDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~------~Gi~i~IaT~~~-~~~i~~~~l~~~gl~~~f 92 (149)
.+++|++|+.- -+ ..-.++++++++ ...+++++|+.. ... ........|..+|+
T Consensus 119 ~~dlillD~~l--p~---------------~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~-~~~~~~~~Ga~~~l 179 (206)
T 3mm4_A 119 PFDYIFMDCQM--PE---------------MDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSE-EARETIQAGMDAFL 179 (206)
T ss_dssp SCSEEEEESCC--SS---------------SCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHH-HHHHHHHHTCSEEE
T ss_pred CCCEEEEcCCC--CC---------------CCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHH-HHHHHHhCCCCEEE
Confidence 48889998752 11 123467777776 578999999986 434 23444456766554
No 228
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=54.71 E-value=13 Score=25.86 Aligned_cols=29 Identities=38% Similarity=0.480 Sum_probs=24.5
Q ss_pred CccCccH-HHHHHHHHHCCceEEEEeCCCc
Q 032013 47 PYLYPHA-KGILEALKEKGIHVAVASRSPA 75 (149)
Q Consensus 47 ~~~~pg~-~e~L~~Lk~~Gi~i~IaT~~~~ 75 (149)
..+.|+. .++++.+++.|+++.+.||+..
T Consensus 14 Pll~~~~~~~l~~~~~~~g~~~~l~TNG~l 43 (182)
T 3can_A 14 PLLHPEFLIDILKRCGQQGIHRAVDTTLLA 43 (182)
T ss_dssp GGGSHHHHHHHHHHHHHTTCCEEEECTTCC
T ss_pred ccCCHHHHHHHHHHHHHCCCcEEEECCCCC
Confidence 3466776 5999999999999999999874
No 229
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=54.53 E-value=40 Score=21.90 Aligned_cols=38 Identities=3% Similarity=-0.010 Sum_probs=26.1
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 67 ~~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l 106 (153)
T 3cz5_A 67 IEATRHIRQWDGAARILIFTMHQGSA-FALKAFEAGASGYV 106 (153)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCCeEEEEECCCCHH-HHHHHHHCCCcEEE
Confidence 4677777764 68999999887665 34445557776554
No 230
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=54.32 E-value=42 Score=21.80 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=35.3
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++|++-. + ....++++.+++. +.+++++|+..... .....-..|..+|+
T Consensus 66 ~~dlii~D~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l 121 (150)
T 4e7p_A 66 SVDIAILDVEMP--V---------------KTGLEVLEWIRSEKLETKVVVVTTFKRAG-YFERAVKAGVDAYV 121 (150)
T ss_dssp CCSEEEECSSCS--S---------------SCHHHHHHHHHHTTCSCEEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred CCCEEEEeCCCC--C---------------CcHHHHHHHHHHhCCCCeEEEEeCCCCHH-HHHHHHHCCCcEEE
Confidence 478888886521 1 1235777788775 68999999987766 34445566765544
No 231
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=54.10 E-value=42 Score=21.75 Aligned_cols=65 Identities=17% Similarity=0.150 Sum_probs=38.9
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH------CCceEEEEeCCCchHHHHHHHHHcCCCCCccc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE------KGIHVAVASRSPAPDIAKTFLHKLGIHSMFVP 94 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~------~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~ 94 (149)
.+.++++|++- -+ ..-.++++++++ ...+++++|+..... ........|..+|+
T Consensus 58 ~~dlvl~D~~m--p~---------------~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~-~~~~~~~~Ga~~~l-- 117 (143)
T 3m6m_D 58 DYDAVIVDLHM--PG---------------MNGLDMLKQLRVMQASGMRYTPVVVLSADVTPE-AIRACEQAGARAFL-- 117 (143)
T ss_dssp CCSEEEEESCC--SS---------------SCHHHHHHHHHHHHHTTCCCCCEEEEESCCCHH-HHHHHHHTTCSEEE--
T ss_pred CCCEEEEeCCC--CC---------------CCHHHHHHHHHhchhccCCCCeEEEEeCCCCHH-HHHHHHHcChhhee--
Confidence 47888888752 11 122466666653 247899999887766 45555667776553
Q ss_pred ccccCCChhHHHHH
Q 032013 95 MVRLSCCIMCIIFF 108 (149)
Q Consensus 95 ~~~~~p~p~~~i~~ 108 (149)
.||-....+..
T Consensus 118 ---~KP~~~~~L~~ 128 (143)
T 3m6m_D 118 ---AKPVVAAKLLD 128 (143)
T ss_dssp ---ESSCCHHHHHH
T ss_pred ---eCCCCHHHHHH
Confidence 35655444443
No 232
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=54.03 E-value=18 Score=25.59 Aligned_cols=29 Identities=7% Similarity=0.063 Sum_probs=25.2
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+|+.+...
T Consensus 125 ~t~~~i~~~~~ak~~g~~vI~IT~~~~s~ 153 (199)
T 1x92_A 125 NSANVIQAIQAAHDREMLVVALTGRDGGG 153 (199)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECTTCHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCCCc
Confidence 34788899999999999999999987665
No 233
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=53.89 E-value=30 Score=26.25 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=28.5
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGI 88 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl 88 (149)
+.|.+.++++.+++.|+.+.+.||+...+ .++.++.
T Consensus 141 l~~~l~~li~~~~~~g~~~~l~TNG~~~~----~l~~L~~ 176 (311)
T 2z2u_A 141 LYPYLDELIKIFHKNGFTTFVVSNGILTD----VIEKIEP 176 (311)
T ss_dssp GSTTHHHHHHHHHHTTCEEEEEECSCCHH----HHHHCCC
T ss_pred chhhHHHHHHHHHHCCCcEEEECCCCCHH----HHHhCCC
Confidence 45788999999999999999999988643 3455565
No 234
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=53.67 E-value=29 Score=25.44 Aligned_cols=30 Identities=10% Similarity=0.161 Sum_probs=20.6
Q ss_pred HHHHHHHHCCceEEEEeCCCchHHHHHHHHH
Q 032013 55 GILEALKEKGIHVAVASRSPAPDIAKTFLHK 85 (149)
Q Consensus 55 e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~ 85 (149)
+..+.+.+.|+++.|+++..... +...+..
T Consensus 201 ~a~~~a~~~gv~v~I~~~~~~~~-l~~~l~g 230 (239)
T 1ybd_A 201 TAFALCRERKLNIVVFGIAKEGS-LKRVITG 230 (239)
T ss_dssp HHHHHHHHTTCCEEEECTTSTTH-HHHHHHT
T ss_pred HHHHHHHHcCCcEEEEeCCChhH-HHHHHcC
Confidence 45666777889988888777666 4555544
No 235
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=52.64 E-value=19 Score=26.74 Aligned_cols=38 Identities=5% Similarity=0.106 Sum_probs=23.6
Q ss_pred HHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 55 GILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 55 e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
++.+.+.+.|+++.|+++..... +...++.-+.-.+|.
T Consensus 202 ~aa~~a~~~gv~v~I~~~~~~~~-l~~~l~g~~~GT~~~ 239 (247)
T 2a1f_A 202 SAFTLARDHGMPIRVFNMGKPGA-LRQVVTGTEEGTTIC 239 (247)
T ss_dssp HHHHHHHHHTCCEEEEETTSTTH-HHHHHTCSCSSEEEC
T ss_pred HHHHHHHHcCCcEEEEeCCCchH-HHHHHcCCCCceEEe
Confidence 45666677789988888776666 455555433333443
No 236
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=51.63 E-value=11 Score=28.56 Aligned_cols=85 Identities=13% Similarity=0.051 Sum_probs=52.0
Q ss_pred ccHHHHHHHHH---HC---CceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCChhHHHHHH--hhCCCcceEEEee
Q 032013 51 PHAKGILEALK---EK---GIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFL--FFFSISAFILFVD 122 (149)
Q Consensus 51 pg~~e~L~~Lk---~~---Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~--~~~~~~~~l~~eD 122 (149)
.|...+++.++ ++ ++++.++.+++... .+...+.+++.+.+... +. .+.+..+|.. ..+.|+. .|-
T Consensus 209 K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~-~~~~~~~~~~~~~v~~~-g~-~~~~~~~~~~ad~~v~ps~---~e~ 282 (374)
T 2iw1_A 209 KGVDRSIEALASLPESLRHNTLLFVVGQDKPRK-FEALAEKLGVRSNVHFF-SG-RNDVSELMAAADLLLHPAY---QEA 282 (374)
T ss_dssp TTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHH-HHHHHHHHTCGGGEEEE-SC-CSCHHHHHHHCSEEEECCS---CCS
T ss_pred cCHHHHHHHHHHhHhccCCceEEEEEcCCCHHH-HHHHHHHcCCCCcEEEC-CC-cccHHHHHHhcCEEEeccc---cCC
Confidence 35555544443 32 67888888777667 58888888875543322 22 2334455554 2233332 266
Q ss_pred hHhHHHHHHHhCCchhhhh
Q 032013 123 LFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 123 s~~gi~aa~~ag~~~~~~~ 141 (149)
.+.=+.-|.++|+++|+..
T Consensus 283 ~~~~~~Ea~a~G~Pvi~~~ 301 (374)
T 2iw1_A 283 AGIVLLEAITAGLPVLTTA 301 (374)
T ss_dssp SCHHHHHHHHHTCCEEEET
T ss_pred cccHHHHHHHCCCCEEEec
Confidence 6777888999999998865
No 237
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=51.63 E-value=19 Score=25.11 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=24.7
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
.+.+.++++.++++|.+++.+|+.+...
T Consensus 100 t~~~~~~~~~ak~~g~~vi~IT~~~~s~ 127 (187)
T 3sho_A 100 LRDTVAALAGAAERGVPTMALTDSSVSP 127 (187)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred CHHHHHHHHHHHHCCCCEEEEeCCCCCc
Confidence 4688899999999999999999987665
No 238
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=51.53 E-value=20 Score=27.94 Aligned_cols=85 Identities=9% Similarity=0.045 Sum_probs=48.5
Q ss_pred cHHHHHHHHHHC----CceEEEEeC----C-CchHHHHHHHHHcCCCCCcccccccCCCh-hHHHHHH--hhCCCcceEE
Q 032013 52 HAKGILEALKEK----GIHVAVASR----S-PAPDIAKTFLHKLGIHSMFVPMVRLSCCI-MCIIFFL--FFFSISAFIL 119 (149)
Q Consensus 52 g~~e~L~~Lk~~----Gi~i~IaT~----~-~~~~i~~~~l~~~gl~~~f~~~~~~~p~p-~~~i~~~--~~~~~~~~l~ 119 (149)
.+.++++.+.++ ++++.++-+ + .... .+...+.+++.+.+.. .+..|.. ...+|.. ..+.|+.
T Consensus 260 ~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~-l~~~~~~~~l~~~v~~-~g~~~~~~~~~~~~~adv~v~ps~--- 334 (438)
T 3c48_A 260 VLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDT-YRHMAEELGVEKRIRF-LDPRPPSELVAVYRAADIVAVPSF--- 334 (438)
T ss_dssp HHHHHHHHHHHHCTTCSEEEEEECCBC------CH-HHHHHHHTTCTTTEEE-ECCCCHHHHHHHHHHCSEEEECCS---
T ss_pred HHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHH-HHHHHHHcCCCCcEEE-cCCCChHHHHHHHHhCCEEEECcc---
Confidence 344666666654 577877765 2 3455 5778888888654432 2333332 3344444 2233332
Q ss_pred EeehHhHHHHHHHhCCchhhhh
Q 032013 120 FVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 120 ~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
.|-.+.-+.-|.++|+++|+..
T Consensus 335 ~e~~~~~~~Eama~G~PvI~~~ 356 (438)
T 3c48_A 335 NESFGLVAMEAQASGTPVIAAR 356 (438)
T ss_dssp CCSSCHHHHHHHHTTCCEEEES
T ss_pred ccCCchHHHHHHHcCCCEEecC
Confidence 2444666888999999998754
No 239
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=51.40 E-value=18 Score=25.39 Aligned_cols=28 Identities=14% Similarity=0.201 Sum_probs=24.1
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
.+.+.++++.++++|.+++.+|+.+...
T Consensus 129 t~~~~~~~~~ak~~g~~vI~IT~~~~s~ 156 (198)
T 2xbl_A 129 SPNILAAFREAKAKGMTCVGFTGNRGGE 156 (198)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECSCCCT
T ss_pred CHHHHHHHHHHHHCCCeEEEEECCCCCc
Confidence 3788899999999999999999887655
No 240
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=51.08 E-value=39 Score=22.06 Aligned_cols=54 Identities=6% Similarity=0.066 Sum_probs=33.4
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+.++++|++-- + ....++++.+++. +.+++++|+..... .....-..|..+|+
T Consensus 47 ~~dliild~~l~--~---------------~~g~~~~~~l~~~~~~~pii~ls~~~~~~-~~~~~~~~g~~~~l 102 (155)
T 1qkk_A 47 FAGIVISDIRMP--G---------------MDGLALFRKILALDPDLPMILVTGHGDIP-MAVQAIQDGAYDFI 102 (155)
T ss_dssp CCSEEEEESCCS--S---------------SCHHHHHHHHHHHCTTSCEEEEECGGGHH-HHHHHHHTTCCEEE
T ss_pred CCCEEEEeCCCC--C---------------CCHHHHHHHHHhhCCCCCEEEEECCCChH-HHHHHHhcCCCeEE
Confidence 478888887521 1 1224667777664 68999999887655 34444456765543
No 241
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=50.59 E-value=41 Score=25.03 Aligned_cols=32 Identities=9% Similarity=0.021 Sum_probs=22.9
Q ss_pred HHHHHHHHCCceEEEEeCCCchHHHHHHHHHcC
Q 032013 55 GILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (149)
Q Consensus 55 e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~g 87 (149)
++.+.+.+.|+++.|++++.... +...+..-+
T Consensus 202 ~aa~~a~~~gv~v~I~~g~~~~~-l~~~l~g~~ 233 (252)
T 1z9d_A 202 TASTLSMDNDIDLVVFNMNEAGN-IQRVVFGEH 233 (252)
T ss_dssp HHHHHHHHTTCEEEEEETTSTTH-HHHHHTTCC
T ss_pred HHHHHHHHcCCeEEEEeCCCchH-HHHHHcCCC
Confidence 46677778899988888887777 465655433
No 242
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=50.43 E-value=17 Score=25.16 Aligned_cols=29 Identities=10% Similarity=0.188 Sum_probs=25.0
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+|+.+...
T Consensus 108 ~t~~~~~~~~~ak~~g~~vi~IT~~~~s~ 136 (183)
T 2xhz_A 108 ESSEITALIPVLKRLHVPLICITGRPESS 136 (183)
T ss_dssp CCHHHHHHHHHHHTTTCCEEEEESCTTSH
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCh
Confidence 34788899999999999999999987665
No 243
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=50.38 E-value=8.5 Score=28.84 Aligned_cols=41 Identities=7% Similarity=-0.154 Sum_probs=30.4
Q ss_pred CCChhHHHHHH--hh-CCCcc--eEEEeehHhHHHHHHHhCCchhh
Q 032013 99 SCCIMCIIFFL--FF-FSISA--FILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 99 ~p~p~~~i~~~--~~-~~~~~--~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.+++.+.-++. .+ +++++ +++|-|+.|++.....||..+.|
T Consensus 188 ~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 233 (275)
T 1xvi_A 188 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV 233 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC
T ss_pred CCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEe
Confidence 34444444444 55 67788 99999999999999999976443
No 244
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=50.08 E-value=19 Score=23.44 Aligned_cols=60 Identities=22% Similarity=0.164 Sum_probs=40.8
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH-CCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~-~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
.++.+++|+.++=+= ++. -.--...+.+++++ +|.++.++.-+ +. +...++..|+...|.
T Consensus 47 ~~~~vvlDls~v~~i-----DSs-----Gl~~L~~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~~ 107 (121)
T 3t6o_A 47 QPRKVLIDLEGVEFF-----GSS-----FIELLVRGWKRIKEDQQGVFALCSVS--PY-CVEVLQVTHIDEVWP 107 (121)
T ss_dssp SSCEEEEECTTCCEE-----CHH-----HHHHHHHHHHHHTTSTTCEEEEESCC--HH-HHHHHTTCSGGGGSC
T ss_pred CCCeEEEECCCCCEE-----cHH-----HHHHHHHHHHHHHHhcCCEEEEEeCC--HH-HHHHHHHhCccceec
Confidence 478899999997542 111 11223366678888 99999877543 45 588899999877664
No 245
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=49.38 E-value=22 Score=24.69 Aligned_cols=28 Identities=14% Similarity=-0.050 Sum_probs=24.4
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
.+.+.++++.++++|.+++.+|+.+...
T Consensus 92 t~~~~~~~~~ak~~g~~vi~IT~~~~s~ 119 (186)
T 1m3s_A 92 TKSLIHTAAKAKSLHGIVAALTINPESS 119 (186)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESCTTSH
T ss_pred cHHHHHHHHHHHHCCCEEEEEECCCCCc
Confidence 3678899999999999999999987655
No 246
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=48.84 E-value=27 Score=27.62 Aligned_cols=59 Identities=8% Similarity=0.036 Sum_probs=37.1
Q ss_pred HHhHHHHHhhhhc--cCCCccEEEEe--------cCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeC
Q 032013 5 EKVKNEALEIIGQ--FENLPRLVVFD--------LDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASR 72 (149)
Q Consensus 5 ~~~~~~~~~~~~~--~~~~~k~vifD--------lDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~ 72 (149)
+.+++.|..+... .......|.+| =+|.+.. +.. +...|+..+.++++++|.+++|=+.
T Consensus 36 ~~i~~~ad~~~~~gl~~~Gy~yv~iDdgW~~~rd~~G~~~~-------d~~--rFP~G~k~ladyih~~Glk~Giy~~ 104 (400)
T 4do4_A 36 QLFMEMADRMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMP-------DPK--RFPHGIPFLADYVHSLGLKLGIYAD 104 (400)
T ss_dssp HHHHHHHHHHHHSSHHHHTCCEEECCSSCEEEECTTCCEEE-------CTT--TSTTCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCcchhhCCeEEEECCCcccCCCCCCCEeE-------Ccc--cCCcccHHHHHHHHHCCceEEEecC
Confidence 4556666555432 22235566665 3455543 221 3445799999999999999999874
No 247
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=48.62 E-value=16 Score=25.70 Aligned_cols=29 Identities=7% Similarity=0.021 Sum_probs=25.1
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+|+.+...
T Consensus 121 ~t~~~i~~~~~ak~~g~~vI~IT~~~~s~ 149 (196)
T 2yva_A 121 NSRDIVKAVEAAVTRDMTIVALTGYDGGE 149 (196)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECTTCHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCch
Confidence 34788899999999999999999987655
No 248
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=48.26 E-value=27 Score=22.52 Aligned_cols=42 Identities=19% Similarity=0.129 Sum_probs=31.3
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCC-CchHHHHHHHHHcCCCC
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRS-PAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~-~~~~i~~~~l~~~gl~~ 90 (149)
...|...++.+.++++|+.++.++.. .... ....++..++..
T Consensus 48 ~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~-~~~~~~~~~~~~ 90 (148)
T 3hcz_A 48 QETPKLYDWWLKNRAKGIQVYAANIERKDEE-WLKFIRSKKIGG 90 (148)
T ss_dssp SHHHHHHHHHHHHGGGTEEEEEEECCSSSHH-HHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhccCCEEEEEEEecCCHHH-HHHHHHHcCCCC
Confidence 35566777778888888988888755 4556 688889888763
No 249
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=47.90 E-value=37 Score=22.08 Aligned_cols=55 Identities=20% Similarity=0.224 Sum_probs=36.4
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH----CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~----~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
..++++++|++- -+ ..-.++++++++ .+.+++++|+..... ........|..+|+
T Consensus 58 ~~~dliilD~~l--~~---------------~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~-~~~~~~~~g~~~~l 116 (152)
T 3heb_A 58 GRAQLVLLDLNL--PD---------------MTGIDILKLVKENPHTRRSPVVILTTTDDQR-EIQRCYDLGANVYI 116 (152)
T ss_dssp TCBEEEEECSBC--SS---------------SBHHHHHHHHHHSTTTTTSCEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred CCCCEEEEeCCC--CC---------------CcHHHHHHHHHhcccccCCCEEEEecCCCHH-HHHHHHHCCCcEEE
Confidence 457888888752 11 133578888887 468899999988766 34445566765543
No 250
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=47.87 E-value=27 Score=22.08 Aligned_cols=39 Identities=8% Similarity=0.176 Sum_probs=26.9
Q ss_pred HHHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 53 AKGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 53 ~~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
-.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~s~~~~~~-~~~~~~~~g~~~~l 108 (129)
T 3h1g_A 66 GLDLVKKVRSDSRFKEIPIIMITAEGGKA-EVITALKAGVNNYI 108 (129)
T ss_dssp HHHHHHHHHTSTTCTTCCEEEEESCCSHH-HHHHHHHHTCCEEE
T ss_pred HHHHHHHHHhcCCCCCCeEEEEeCCCChH-HHHHHHHcCccEEE
Confidence 35788888863 57899999887765 34444556766554
No 251
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=47.77 E-value=47 Score=25.42 Aligned_cols=84 Identities=7% Similarity=0.054 Sum_probs=48.9
Q ss_pred cHHHHHHHHHHC-CceEEEEeCCCc-hHHHHHHHHHcCCCCCcccccccCCChhHHHHHH--hhCCCcceEEEeehHhHH
Q 032013 52 HAKGILEALKEK-GIHVAVASRSPA-PDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFL--FFFSISAFILFVDLFCFM 127 (149)
Q Consensus 52 g~~e~L~~Lk~~-Gi~i~IaT~~~~-~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~gi 127 (149)
.+.++++.+.++ ++++.++.+++. .. .+...+.+++.+.+... +. .+....+|.. ..+.|+. .|-.+.-+
T Consensus 228 ~li~a~~~l~~~~~~~l~i~G~g~~~~~-l~~~~~~~~l~~~v~~~-g~-~~~~~~~~~~adv~v~ps~---~e~~~~~~ 301 (394)
T 2jjm_A 228 DVVQAFAKIVTEVDAKLLLVGDGPEFCT-ILQLVKNLHIEDRVLFL-GK-QDNVAELLAMSDLMLLLSE---KESFGLVL 301 (394)
T ss_dssp HHHHHHHHHHHSSCCEEEEECCCTTHHH-HHHHHHTTTCGGGBCCC-BS-CSCTHHHHHTCSEEEECCS---CCSCCHHH
T ss_pred HHHHHHHHHHhhCCCEEEEECCchHHHH-HHHHHHHcCCCCeEEEe-Cc-hhhHHHHHHhCCEEEeccc---cCCCchHH
Confidence 344556666554 678888876554 44 56777777775533322 22 2333455544 2233322 35556678
Q ss_pred HHHHHhCCchhhhh
Q 032013 128 YAAAYVGCDLYVYK 141 (149)
Q Consensus 128 ~aa~~ag~~~~~~~ 141 (149)
.-|.++|+++|+..
T Consensus 302 ~EAma~G~PvI~~~ 315 (394)
T 2jjm_A 302 LEAMACGVPCIGTR 315 (394)
T ss_dssp HHHHHTTCCEEEEC
T ss_pred HHHHhcCCCEEEec
Confidence 88999999998754
No 252
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=47.09 E-value=23 Score=25.86 Aligned_cols=36 Identities=6% Similarity=-0.007 Sum_probs=26.6
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
.|...++.++++++|+.++.+|..+... ...+++..
T Consensus 76 ~p~l~~l~~~~~~~~v~vv~Is~D~~~~-~~~~~~~~ 111 (221)
T 2c0d_A 76 IIEFNKHIKDFENKNVELLGISVDSVYS-HLAWKNMP 111 (221)
T ss_dssp HHHHHHTHHHHHHTTEEEEEEESSCHHH-HHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHh
Confidence 4555566777778899999999866666 57777766
No 253
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=46.80 E-value=15 Score=25.59 Aligned_cols=28 Identities=18% Similarity=0.032 Sum_probs=23.7
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
.+.+.++++.++++|.+++.+|+.+...
T Consensus 123 t~~~~~~~~~ak~~g~~vi~iT~~~~s~ 150 (188)
T 1tk9_A 123 SPNVLEALKKAKELNMLCLGLSGKGGGM 150 (188)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEGGGTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCCcc
Confidence 4788899999999999999999876554
No 254
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=46.46 E-value=61 Score=22.57 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=25.6
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 59 ~~~~~~lr~~~~~~~ii~lt~~~~~~-~~~~~~~~ga~~~l 98 (220)
T 1p2f_A 59 YEICRMIKETRPETWVILLTLLSDDE-SVLKGFEAGADDYV 98 (220)
T ss_dssp HHHHHHHHHHCTTSEEEEEESCCSHH-HHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCCcEEEEEcCCCHH-HHHHHHHcCCCEEE
Confidence 4677777764 78999999887665 34444456765543
No 255
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=46.39 E-value=37 Score=21.67 Aligned_cols=39 Identities=18% Similarity=0.312 Sum_probs=27.4
Q ss_pred HHHHHHHHHH----CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 53 AKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 53 ~~e~L~~Lk~----~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
-.++++++++ .+.+++++|+..... .....-..|..+|+
T Consensus 66 g~~~~~~l~~~~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l 108 (140)
T 3lua_A 66 GLEVLSAIRNNSRTANTPVIIATKSDNPG-YRHAALKFKVSDYI 108 (140)
T ss_dssp HHHHHHHHHHSGGGTTCCEEEEESCCCHH-HHHHHHHSCCSEEE
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCCCHH-HHHHHHHcCCCEEE
Confidence 3577888877 478999999987766 34445567766543
No 256
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=46.25 E-value=60 Score=23.34 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=34.6
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++|++- -+ ..-.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 67 ~~dlvllD~~l--p~---------------~~g~~~~~~lr~~~~~~~ii~lt~~~~~~-~~~~~~~~Ga~~yl 122 (250)
T 3r0j_A 67 RPDAVILDVXM--PG---------------MDGFGVLRRLRADGIDAPALFLTARDSLQ-DKIAGLTLGGDDYV 122 (250)
T ss_dssp CCSEEEEESCC--SS---------------SCHHHHHHHHHHTTCCCCEEEEECSTTHH-HHHHHHTSTTCEEE
T ss_pred CCCEEEEeCCC--CC---------------CCHHHHHHHHHhcCCCCCEEEEECCCCHH-HHHHHHHcCCcEEE
Confidence 37888888751 11 1235788888876 57999999987655 33334445665543
No 257
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=45.89 E-value=21 Score=25.49 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=25.1
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+|+.+...
T Consensus 101 ~t~~~i~~~~~ak~~g~~vI~IT~~~~s~ 129 (200)
T 1vim_A 101 ETTSVVNISKKAKDIGSKLVAVTGKRDSS 129 (200)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEEESCTTSH
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCh
Confidence 34788899999999999999999987655
No 258
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=45.73 E-value=36 Score=22.76 Aligned_cols=66 Identities=15% Similarity=0.169 Sum_probs=39.3
Q ss_pred ccEEEEecCCccc------------cccccccccCCCCccCccHHHHHHHHHHCC--ceEEEEeCC----CchHHHHHHH
Q 032013 22 PRLVVFDLDYTLW------------PFYCECCYEDEIPYLYPHAKGILEALKEKG--IHVAVASRS----PAPDIAKTFL 83 (149)
Q Consensus 22 ~k~vifDlDGTLl------------d~~~~~~~~~~~~~~~pg~~e~L~~Lk~~G--i~i~IaT~~----~~~~i~~~~l 83 (149)
|..-+.|.||.-+ .++..|++... ....|...++.+.++++| +.++.+|-. +... +..++
T Consensus 14 p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C-~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~-~~~~~ 91 (174)
T 1xzo_A 14 EPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETIC-PPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQ-LKKFA 91 (174)
T ss_dssp CCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCC-CSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHH-HHHHH
T ss_pred CCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchh-HHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHH-HHHHH
Confidence 5556677777533 33333333111 134566677777888886 888888854 3345 57777
Q ss_pred HHcCCC
Q 032013 84 HKLGIH 89 (149)
Q Consensus 84 ~~~gl~ 89 (149)
+..++.
T Consensus 92 ~~~~~~ 97 (174)
T 1xzo_A 92 ANYPLS 97 (174)
T ss_dssp TTSCCC
T ss_pred HHcCCC
Confidence 777764
No 259
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=45.34 E-value=54 Score=20.49 Aligned_cols=38 Identities=16% Similarity=0.186 Sum_probs=23.9
Q ss_pred HHHHHHHHH---CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE---KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~---~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ ...+++++|+..... .....-..|..+|+
T Consensus 64 ~~~~~~l~~~~~~~~~ii~ls~~~~~~-~~~~~~~~ga~~~l 104 (130)
T 1dz3_A 64 LAVLERIRAGFEHQPNVIMLTAFGQED-VTKKAVELGASYFI 104 (130)
T ss_dssp HHHHHHHHHHCSSCCEEEEEEETTCHH-HHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCCCCcEEEEecCCCHH-HHHHHHHcCCCEEE
Confidence 467777775 356788888876655 34444456765543
No 260
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=44.86 E-value=24 Score=28.12 Aligned_cols=84 Identities=12% Similarity=-0.071 Sum_probs=49.1
Q ss_pred cHHHHHHHHHHCCceEEEEeCCCc---hHHHHHHHHHcCCCCCcccccccCCChhHHHHHH--hhCCCcceEEEeehHhH
Q 032013 52 HAKGILEALKEKGIHVAVASRSPA---PDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFL--FFFSISAFILFVDLFCF 126 (149)
Q Consensus 52 g~~e~L~~Lk~~Gi~i~IaT~~~~---~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~--~~~~~~~~l~~eDs~~g 126 (149)
.+.++++.+.+.++++.|+-.++. .. .+...+.++ +.+....+...+....+|.. ..+-|+. .|-.+.=
T Consensus 309 ~li~a~~~l~~~~~~l~ivG~g~~~~~~~-l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~adv~v~pS~---~E~~g~~ 382 (485)
T 2qzs_A 309 LVLEALPGLLEQGGQLALLGAGDPVLQEG-FLAAAAEYP--GQVGVQIGYHEAFSHRIMGGADVILVPSR---FEPCGLT 382 (485)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECHHHHHH-HHHHHHHST--TTEEEEESCCHHHHHHHHHHCSEEEECCS---CCSSCSH
T ss_pred HHHHHHHHHhhCCcEEEEEeCCchHHHHH-HHHHHHhCC--CcEEEeCCCCHHHHHHHHHhCCEEEECCc---cCCCcHH
Confidence 445666777667899888876652 33 355555554 22221223322222455555 2344433 4666667
Q ss_pred HHHHHHhCCchhhhh
Q 032013 127 MYAAAYVGCDLYVYK 141 (149)
Q Consensus 127 i~aa~~ag~~~~~~~ 141 (149)
+.-|.++|+++|+..
T Consensus 383 ~lEAma~G~PvI~s~ 397 (485)
T 2qzs_A 383 QLYGLKYGTLPLVRR 397 (485)
T ss_dssp HHHHHHHTCEEEEES
T ss_pred HHHHHHCCCCEEECC
Confidence 888999999998763
No 261
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=43.88 E-value=61 Score=22.08 Aligned_cols=69 Identities=12% Similarity=-0.007 Sum_probs=41.0
Q ss_pred CCCccEEEEecCC--ccccc---ccc-----ccccCCCCccCccHHHHHHHHHHCCceEEEEe-CCCchHHHHHHHHHcC
Q 032013 19 ENLPRLVVFDLDY--TLWPF---YCE-----CCYEDEIPYLYPHAKGILEALKEKGIHVAVAS-RSPAPDIAKTFLHKLG 87 (149)
Q Consensus 19 ~~~~k~vifDlDG--TLld~---~~~-----~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT-~~~~~~i~~~~l~~~g 87 (149)
...|..-+-|.|| .-+.. ... +...+ ...-......|+.+.++|+.++.++ ...... ....++..+
T Consensus 34 ~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~--C~~C~~~~~~l~~l~~~~v~vv~vs~~d~~~~-~~~~~~~~~ 110 (176)
T 3kh7_A 34 KPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTW--CPSCRVEHPELTRLAEQGVVIYGINYKDDNAA-AIKWLNELH 110 (176)
T ss_dssp SBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTT--CHHHHHHHHHHHHHHHTTCEEEEEEESCCHHH-HHHHHHHTT
T ss_pred CcCCCcEecccCCCCceecHHHhCCCEEEEEEECCc--CHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHH-HHHHHHHcC
Confidence 4446777889998 32221 000 01111 1222333456777777799999888 566666 688888888
Q ss_pred CCC
Q 032013 88 IHS 90 (149)
Q Consensus 88 l~~ 90 (149)
+..
T Consensus 111 ~~~ 113 (176)
T 3kh7_A 111 NPY 113 (176)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
No 262
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=43.38 E-value=43 Score=21.21 Aligned_cols=44 Identities=14% Similarity=0.069 Sum_probs=31.0
Q ss_pred EEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC
Q 032013 24 LVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS 73 (149)
Q Consensus 24 ~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~ 73 (149)
.|+|=-||+.+-. +. ......+...+.++.|.+.|+++.++..+
T Consensus 38 ~vff~~dgV~~~~-----~~-~~~~~~~~~~~~l~~l~~~gv~v~~C~~~ 81 (117)
T 1jx7_A 38 RLFLMSDAVTAGL-----RG-QKPGEGYNIQQMLEILTAQNVPVKLCKTC 81 (117)
T ss_dssp EEEECGGGGGGGB-----SC-CCCSSSCCHHHHHHHHHHTTCCEEEEHHH
T ss_pred EEEEEchHHHHHh-----cC-CCCCcCCCHHHHHHHHHHCCCEEEEeHHH
Confidence 6888899997752 11 11112257889999999999999987643
No 263
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=43.12 E-value=35 Score=21.67 Aligned_cols=37 Identities=24% Similarity=0.385 Sum_probs=22.9
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCC
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~ 91 (149)
.++++++++. +.+++++|+..... .....-..|..+|
T Consensus 74 ~~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~ 112 (137)
T 2pln_A 74 LSFVSRIKEKHSSIVVLVSSDNPTSE-EEVHAFEQGADDY 112 (137)
T ss_dssp HHHHHHHHHHSTTSEEEEEESSCCHH-HHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCCCccEEEEeCCCCHH-HHHHHHHcCCcee
Confidence 4666666664 67888888876655 3344445565544
No 264
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=43.06 E-value=43 Score=21.76 Aligned_cols=38 Identities=21% Similarity=0.284 Sum_probs=25.0
Q ss_pred HHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 77 ~~l~~~l~~~~~~~~~piiils~~~~~~-~~~~~~~~ga~~~l 118 (149)
T 1i3c_A 77 REVLAEIKQNPDLKRIPVVVLTTSHNED-DVIASYELHVNCYL 118 (149)
T ss_dssp HHHHHHHHHCTTTTTSCEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhCcCcCCCeEEEEECCCChH-HHHHHHHcCCcEEE
Confidence 4778888874 57899999887654 23333456765543
No 265
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=42.71 E-value=19 Score=24.96 Aligned_cols=27 Identities=4% Similarity=-0.100 Sum_probs=23.4
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCch
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAP 76 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~ 76 (149)
.+.+.++++.++++|.+++.+|+.+..
T Consensus 95 t~~~~~~~~~ak~~g~~vi~IT~~~~s 121 (180)
T 1jeo_A 95 TESVLTVAKKAKNINNNIIAIVCECGN 121 (180)
T ss_dssp CHHHHHHHHHHHTTCSCEEEEESSCCG
T ss_pred cHHHHHHHHHHHHCCCcEEEEeCCCCh
Confidence 367889999999999999999997644
No 266
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=42.69 E-value=41 Score=21.31 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=25.8
Q ss_pred HHHHHHHHH----CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~----~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ .+.+++++|+..... .....-..|..+|+
T Consensus 70 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 111 (143)
T 3cnb_A 70 FSICHRIKSTPATANIIVIAMTGALTDD-NVSRIVALGAETCF 111 (143)
T ss_dssp HHHHHHHHTSTTTTTSEEEEEESSCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhCccccCCcEEEEeCCCCHH-HHHHHHhcCCcEEE
Confidence 477888877 467899999887665 34444556765544
No 267
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=42.67 E-value=82 Score=21.79 Aligned_cols=38 Identities=24% Similarity=0.196 Sum_probs=26.2
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 67 ~~~~~~lr~~~~~~~ii~ls~~~~~~-~~~~~~~~Ga~~~l 106 (215)
T 1a04_A 67 LETLDKLREKSLSGRIVVFSVSNHEE-DVVTALKRGADGYL 106 (215)
T ss_dssp HHHHHHHHHSCCCSEEEEEECCCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCCcEEEEECCCCHH-HHHHHHHcCCcEEE
Confidence 5788888875 57899999887665 34444456766554
No 268
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=42.52 E-value=17 Score=25.27 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=29.8
Q ss_pred CccHHHHHHHHHHCCce-EEEEeCCCchHHHHHHHHHcCC
Q 032013 50 YPHAKGILEALKEKGIH-VAVASRSPAPDIAKTFLHKLGI 88 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~-i~IaT~~~~~~i~~~~l~~~gl 88 (149)
.|...+..++++++|+. +..+|...... .+.+.++.++
T Consensus 64 ~p~l~~~~~~~~~~g~~~vv~Is~d~~~~-~~~~~~~~~~ 102 (171)
T 2pwj_A 64 VPPYKHNIDKFKAKGVDSVICVAINDPYT-VNAWAEKIQA 102 (171)
T ss_dssp HHHHHHTHHHHHHTTCSEEEEEESSCHHH-HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCHHH-HHHHHHHhCC
Confidence 45666777888889999 88888776666 6888888886
No 269
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=42.37 E-value=51 Score=20.89 Aligned_cols=56 Identities=9% Similarity=0.123 Sum_probs=39.0
Q ss_pred EEEEecCCccc-cccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 24 LVVFDLDYTLW-PFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 24 ~vifDlDGTLl-d~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
.+++|+-++=. | +. -.--..++.++++++|.++.++.-+ +. +...++..|+...|.
T Consensus 44 ~vvlDls~v~~iD------ss-----gl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~~ 100 (117)
T 4hyl_A 44 KMILDLREVSYMS------SA-----GLRVLLSLYRHTSNQQGALVLVGVS--EE-IRDTMEITGFWNFFT 100 (117)
T ss_dssp EEEEEEEEEEEEC------HH-----HHHHHHHHHHHHHHTTCEEEEECCC--HH-HHHHHHHHTCGGGCE
T ss_pred eEEEECCCCcEEc------HH-----HHHHHHHHHHHHHHcCCEEEEEeCC--HH-HHHHHHHhCccceee
Confidence 79999988744 3 11 1122346678888999998876543 44 588999999987764
No 270
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=42.16 E-value=46 Score=21.16 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=27.0
Q ss_pred HHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 53 AKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 53 ~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
-.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 67 g~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~ga~~~l 107 (136)
T 3kto_A 67 GIELLETLVKRGFHLPTIVMASSSDIP-TAVRAMRASAADFI 107 (136)
T ss_dssp HHHHHHHHHHTTCCCCEEEEESSCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHcChHHhe
Confidence 35788888876 68999999887765 34444456765543
No 271
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=41.84 E-value=25 Score=27.94 Aligned_cols=82 Identities=10% Similarity=-0.060 Sum_probs=48.6
Q ss_pred HHHHHHHHHHCCceEEEEeCCCc---hHHHHHHHHHcCCCCCcccccccCCChh-HHHHHH--hhCCCcceEEEeehHhH
Q 032013 53 AKGILEALKEKGIHVAVASRSPA---PDIAKTFLHKLGIHSMFVPMVRLSCCIM-CIIFFL--FFFSISAFILFVDLFCF 126 (149)
Q Consensus 53 ~~e~L~~Lk~~Gi~i~IaT~~~~---~~i~~~~l~~~gl~~~f~~~~~~~p~p~-~~i~~~--~~~~~~~~l~~eDs~~g 126 (149)
+.++++.+++.++++.|+-+++. .. .+...+.++ +.+....++ ++.. +.+|.. ..+-|+. .|=.+.-
T Consensus 309 li~a~~~l~~~~~~l~ivG~g~~~~~~~-l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~pS~---~E~~~~~ 381 (485)
T 1rzu_A 309 MAEAVDEIVSLGGRLVVLGAGDVALEGA-LLAAASRHH--GRVGVAIGY-NEPLSHLMQAGCDAIIIPSR---FEPCGLT 381 (485)
T ss_dssp HHTTHHHHHHTTCEEEEEECBCHHHHHH-HHHHHHHTT--TTEEEEESC-CHHHHHHHHHHCSEEEECCS---CCSSCSH
T ss_pred HHHHHHHHHhcCceEEEEeCCchHHHHH-HHHHHHhCC--CcEEEecCC-CHHHHHHHHhcCCEEEECcc---cCCCCHH
Confidence 34556677667899998887752 33 355555554 222212233 3332 455555 2344433 4666677
Q ss_pred HHHHHHhCCchhhhh
Q 032013 127 MYAAAYVGCDLYVYK 141 (149)
Q Consensus 127 i~aa~~ag~~~~~~~ 141 (149)
+.-|.++|+++|+..
T Consensus 382 ~lEAma~G~PvI~s~ 396 (485)
T 1rzu_A 382 QLYALRYGCIPVVAR 396 (485)
T ss_dssp HHHHHHHTCEEEEES
T ss_pred HHHHHHCCCCEEEeC
Confidence 889999999998754
No 272
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=41.55 E-value=50 Score=21.89 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=31.6
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
..|...++.++++++|+.++.+|..+... ...+.+..++.
T Consensus 54 ~~~~l~~~~~~~~~~~~~vv~vs~d~~~~-~~~~~~~~~~~ 93 (163)
T 3gkn_A 54 EGLDFNALLPEFDKAGAKILGVSRDSVKS-HDNFCAKQGFA 93 (163)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHhCCC
Confidence 34566677788888999999999877777 68888888865
No 273
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=41.41 E-value=48 Score=20.70 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=25.5
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 67 ~~~~~~l~~~~~~~~ii~~t~~~~~~-~~~~~~~~g~~~~l 106 (130)
T 3eod_A 67 LKLLEHIRNRGDQTPVLVISATENMA-DIAKALRLGVEDVL 106 (130)
T ss_dssp HHHHHHHHHTTCCCCEEEEECCCCHH-HHHHHHHHCCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEEcCCCHH-HHHHHHHcCCCEEE
Confidence 4677777765 57899999887766 34444556765543
No 274
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=41.15 E-value=38 Score=23.32 Aligned_cols=39 Identities=15% Similarity=0.145 Sum_probs=30.6
Q ss_pred CccHHHHHHHHHHCCc-eEEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGI-HVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi-~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.|...+..++++++|+ .++.+|..+... .+.+.++.++.
T Consensus 52 ~p~l~~~~~~~~~~gv~~vv~Is~d~~~~-~~~~~~~~~~~ 91 (167)
T 2wfc_A 52 LPGYVEQAAAIHGKGVDIIACMAVNDSFV-MDAWGKAHGAD 91 (167)
T ss_dssp HHHHHHTHHHHHHTTCCEEEEEESSCHHH-HHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCHHH-HHHHHHhcCCC
Confidence 4566677788888999 888888776666 68888888875
No 275
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=41.07 E-value=38 Score=22.91 Aligned_cols=39 Identities=18% Similarity=0.122 Sum_probs=30.2
Q ss_pred CccHHHHHHHHHHCCce-EEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIH-VAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~-i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.|...+..++++++|+. +..+|..+... ...+.++.++.
T Consensus 56 ~~~l~~~~~~~~~~~v~~vv~Is~d~~~~-~~~~~~~~~~~ 95 (162)
T 1tp9_A 56 VPGFIEKAGELKSKGVTEILCISVNDPFV-MKAWAKSYPEN 95 (162)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEESSCHHH-HHHHHHTCTTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCHHH-HHHHHHhcCCC
Confidence 45666777888889999 88888776666 68888888873
No 276
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=40.67 E-value=55 Score=25.27 Aligned_cols=86 Identities=14% Similarity=0.053 Sum_probs=50.8
Q ss_pred cHHHHHHHHHHC--CceEEEEeCCCc------hHHHHHHHHHcCCCCCcccccccCC--C-hhHHHHHH--hhCCCcceE
Q 032013 52 HAKGILEALKEK--GIHVAVASRSPA------PDIAKTFLHKLGIHSMFVPMVRLSC--C-IMCIIFFL--FFFSISAFI 118 (149)
Q Consensus 52 g~~e~L~~Lk~~--Gi~i~IaT~~~~------~~i~~~~l~~~gl~~~f~~~~~~~p--~-p~~~i~~~--~~~~~~~~l 118 (149)
...++++.++++ ++++.++..++. .. .+...+.+++.+.+.......+ + ....+|.. ..+.|+.
T Consensus 248 ~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~-l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~-- 324 (416)
T 2x6q_A 248 DVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIY-FEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSI-- 324 (416)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHH-HHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--
T ss_pred HHHHHHHHHHHhCCCeEEEEEecCcccchhHHHH-HHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCC--
Confidence 344566666553 688888887753 33 4666777787554433211122 1 23344444 2344433
Q ss_pred EEeehHhHHHHHHHhCCchhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
.|-.+.=+.-|.++|+++|+..
T Consensus 325 -~E~~~~~~lEAma~G~PvI~~~ 346 (416)
T 2x6q_A 325 -REGFGLTVTEAMWKGKPVIGRA 346 (416)
T ss_dssp -SCSSCHHHHHHHHTTCCEEEES
T ss_pred -cCCCccHHHHHHHcCCCEEEcc
Confidence 3666777889999999998764
No 277
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=40.24 E-value=37 Score=23.44 Aligned_cols=68 Identities=10% Similarity=0.132 Sum_probs=40.8
Q ss_pred CCCccEEEEecCCccccc------------cccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC--------CchHH
Q 032013 19 ENLPRLVVFDLDYTLWPF------------YCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS--------PAPDI 78 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~------------~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~i 78 (149)
...|..-+.|.||.-++. +..|++.. ....|...++.++++++|+.++.+|.. +.+.
T Consensus 27 ~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C--~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~- 103 (185)
T 2gs3_A 27 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKT--EVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEE- 103 (185)
T ss_dssp CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTH--HHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHH-
T ss_pred CCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCch--HHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHH-
Confidence 344666778888864432 21222211 123455666777777788999888743 2345
Q ss_pred HHHHHHHcCCC
Q 032013 79 AKTFLHKLGIH 89 (149)
Q Consensus 79 ~~~~l~~~gl~ 89 (149)
+...++..++.
T Consensus 104 ~~~~~~~~~~~ 114 (185)
T 2gs3_A 104 IKEFAAGYNVK 114 (185)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 57777888875
No 278
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=40.11 E-value=57 Score=20.12 Aligned_cols=38 Identities=24% Similarity=0.255 Sum_probs=25.0
Q ss_pred HHHHHHHHH--CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~--~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ ...+++++|+..... .....-..|..+|+
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 102 (124)
T 1srr_A 63 IEILKRMKVIDENIRVIIMTAYGELD-MIQESKELGALTHF 102 (124)
T ss_dssp HHHHHHHHHHCTTCEEEEEESSCCHH-HHHHHHHHTCCCEE
T ss_pred HHHHHHHHHhCCCCCEEEEEccCchH-HHHHHHhcChHhhc
Confidence 467777775 478999999887655 33444456765554
No 279
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=40.11 E-value=21 Score=25.71 Aligned_cols=29 Identities=7% Similarity=0.009 Sum_probs=25.0
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+|+.+...
T Consensus 126 ~t~~~~~~~~~ak~~g~~vi~iT~~~~s~ 154 (201)
T 3trj_A 126 DSENILSAVEEAHDLEMKVIALTGGSGGA 154 (201)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEETTCCG
T ss_pred CCHHHHHHHHHHHHCCCcEEEEECCCCCH
Confidence 34788899999999999999999887655
No 280
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=39.69 E-value=17 Score=26.24 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=23.7
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
.+.+.++++.++++|.+++.+|+.+...
T Consensus 144 t~~~i~~~~~ak~~G~~vIaIT~~~~s~ 171 (212)
T 2i2w_A 144 SANVIKAIAAAREKGMKVITLTGKDGGK 171 (212)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEETTCGG
T ss_pred CHHHHHHHHHHHHCCCeEEEEECCCCCc
Confidence 3788899999999999999999876544
No 281
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=39.65 E-value=70 Score=20.23 Aligned_cols=38 Identities=3% Similarity=-0.046 Sum_probs=25.2
Q ss_pred HHHHHHHHH---CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE---KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~---~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ ...+++++|+..... .....-..|..+|+
T Consensus 68 ~~~~~~lr~~~~~~~~ii~lt~~~~~~-~~~~~~~~ga~~~l 108 (133)
T 2r25_B 68 LLSTKMIRRDLGYTSPIVALTAFADDS-NIKECLESGMNGFL 108 (133)
T ss_dssp HHHHHHHHHHSCCCSCEEEEESCCSHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhhcCCCCCEEEEECCCCHH-HHHHHHHcCCCEEE
Confidence 477778875 257899999887665 34444456765543
No 282
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.63 E-value=59 Score=23.37 Aligned_cols=18 Identities=17% Similarity=0.098 Sum_probs=10.0
Q ss_pred HHHHHHHHHCCceEEEEe
Q 032013 54 KGILEALKEKGIHVAVAS 71 (149)
Q Consensus 54 ~e~L~~Lk~~Gi~i~IaT 71 (149)
.+.|+.+++.+-++++++
T Consensus 84 l~al~~a~~~~~kIavvg 101 (196)
T 2q5c_A 84 MRAVYNAKRFGNELALIA 101 (196)
T ss_dssp HHHHHHHGGGCSEEEEEE
T ss_pred HHHHHHHHhhCCcEEEEe
Confidence 345555555555666666
No 283
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=39.39 E-value=53 Score=20.43 Aligned_cols=38 Identities=16% Similarity=0.084 Sum_probs=25.2
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~ga~~~l 102 (126)
T 1dbw_A 63 VELLRNLGDLKINIPSIVITGHGDVP-MAVEAMKAGAVDFI 102 (126)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTTCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCHH-HHHHHHHhCHHHhe
Confidence 4677888774 67899999887655 33444456765543
No 284
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=39.36 E-value=31 Score=23.76 Aligned_cols=67 Identities=9% Similarity=0.141 Sum_probs=39.8
Q ss_pred CCccEEEEecCCccccc------------cccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC--------CchHHH
Q 032013 20 NLPRLVVFDLDYTLWPF------------YCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS--------PAPDIA 79 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~------------~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~i~ 79 (149)
..|..-+.|.||.-++. +..|++.. ....|...++.++++++|+.++.+|.. +... +
T Consensus 28 ~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C--~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~-~ 104 (181)
T 2p31_A 28 DFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFT--DQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKE-I 104 (181)
T ss_dssp CGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTH--HHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHH-H
T ss_pred ccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCc--HHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHH-H
Confidence 34666777888864332 22233211 123455666777777788999888853 2345 5
Q ss_pred HHHHHH-cCCC
Q 032013 80 KTFLHK-LGIH 89 (149)
Q Consensus 80 ~~~l~~-~gl~ 89 (149)
...++. .++.
T Consensus 105 ~~~~~~~~~~~ 115 (181)
T 2p31_A 105 ESFARRTYSVS 115 (181)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHhhcCCC
Confidence 677777 7764
No 285
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=38.64 E-value=33 Score=23.57 Aligned_cols=68 Identities=12% Similarity=0.198 Sum_probs=40.3
Q ss_pred CCCccEEEEecCCccccc------------cccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC--------CchHH
Q 032013 19 ENLPRLVVFDLDYTLWPF------------YCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS--------PAPDI 78 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~------------~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~i 78 (149)
...|..-+.|.||.-++. +..|++.. ....|...++.+.++++|+.++.+|.. +...
T Consensus 25 ~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C--~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~- 101 (183)
T 2obi_A 25 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKT--EVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEE- 101 (183)
T ss_dssp CSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTH--HHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHH-
T ss_pred CcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCc--HHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHH-
Confidence 344666777888854432 21222211 123455566677777788998888843 2345
Q ss_pred HHHHHHHcCCC
Q 032013 79 AKTFLHKLGIH 89 (149)
Q Consensus 79 ~~~~l~~~gl~ 89 (149)
+...++..++.
T Consensus 102 ~~~~~~~~~~~ 112 (183)
T 2obi_A 102 IKEFAAGYNVK 112 (183)
T ss_dssp HHHHHHTTTCC
T ss_pred HHHHHHHcCCC
Confidence 57777877765
No 286
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=38.35 E-value=54 Score=25.23 Aligned_cols=84 Identities=12% Similarity=-0.019 Sum_probs=49.0
Q ss_pred HHHHHHHHH--CCceEEEEeCCCc-------hHHHHHHHHHcCCCCCcc------cccccCCCh-hHHHHHH--hhCCCc
Q 032013 54 KGILEALKE--KGIHVAVASRSPA-------PDIAKTFLHKLGIHSMFV------PMVRLSCCI-MCIIFFL--FFFSIS 115 (149)
Q Consensus 54 ~e~L~~Lk~--~Gi~i~IaT~~~~-------~~i~~~~l~~~gl~~~f~------~~~~~~p~p-~~~i~~~--~~~~~~ 115 (149)
.++++.+.+ .++++.|+-+++. .. .+...+..|+.+.+. ...+.-|.. ...+|.. ..+.|+
T Consensus 203 i~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~-~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS 281 (413)
T 3oy2_A 203 VLAAARFISKYPDAKVRFLCNSHHESKFDLHSI-ALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCS 281 (413)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHH-HHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECC
T ss_pred HHHHHHHHHhCCCcEEEEEeCCcccchhhHHHH-HHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCC
Confidence 345555543 3578887765543 45 577778889876422 122333332 3344443 223343
Q ss_pred ceEEEeehHhHHHHHHHhCCchhhhh
Q 032013 116 AFILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 116 ~~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
. .|-.+.=+.-|.++|+++|+..
T Consensus 282 ~---~E~~~~~~lEAma~G~PvI~s~ 304 (413)
T 3oy2_A 282 S---GEGFGLCSAEGAVLGKPLIISA 304 (413)
T ss_dssp S---CCSSCHHHHHHHTTTCCEEEEC
T ss_pred C---cCCCCcHHHHHHHcCCCEEEcC
Confidence 3 4666667888999999998753
No 287
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=38.16 E-value=53 Score=20.65 Aligned_cols=39 Identities=10% Similarity=0.292 Sum_probs=26.3
Q ss_pred HHHHHHHHHHC---CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 53 AKGILEALKEK---GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 53 ~~e~L~~Lk~~---Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
..++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 67 g~~~~~~l~~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 108 (136)
T 3hdv_A 67 GLDLIRTIRASERAALSIIVVSGDTDVE-EAVDVMHLGVVDFL 108 (136)
T ss_dssp HHHHHHHHHTSTTTTCEEEEEESSCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCChH-HHHHHHhCCcceEE
Confidence 35778888765 47899999887765 34445556765543
No 288
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=37.95 E-value=74 Score=19.94 Aligned_cols=38 Identities=5% Similarity=0.015 Sum_probs=24.6
Q ss_pred HHHHHHHHH-CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~-~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++.+++ .+.+++++|+..... .....-..|..+|+
T Consensus 71 ~~~~~~l~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l 109 (140)
T 3cg0_A 71 VETAARLAAGCNLPIIFITSSQDVE-TFQRAKRVNPFGYL 109 (140)
T ss_dssp HHHHHHHHHHSCCCEEEEECCCCHH-HHHHHHTTCCSEEE
T ss_pred HHHHHHHHhCCCCCEEEEecCCCHH-HHHHHHhcCCCEEE
Confidence 356666655 479999999887765 34444456665543
No 289
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=37.92 E-value=68 Score=24.54 Aligned_cols=58 Identities=21% Similarity=0.197 Sum_probs=43.8
Q ss_pred cEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 23 k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
+.++.=+-|..+.. + .....+.+-+..|++.|++++|++|+. .. +...++++++..-|
T Consensus 27 k~iVIKlGGs~l~~-----~-----~~~~~~~~~i~~l~~~G~~vVlVhGgG-~~-i~~~~~~~g~~~~~ 84 (300)
T 2buf_A 27 KTLVIKYGGNAMES-----E-----ELKAGFARDVVLMKAVGINPVVVHGGG-PQ-IGDLLKRLSIESHF 84 (300)
T ss_dssp CEEEEEECCTTTTS-----S-----HHHHHHHHHHHHHHHTTCEEEEEECCC-HH-HHHHHHHTTCCCCB
T ss_pred CeEEEEECchhhCC-----c-----hHHHHHHHHHHHHHHCCCeEEEEECCc-HH-HHHHHHHcCCCccc
Confidence 56888999998862 1 133456677888999999999999984 45 57888999987644
No 290
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=37.87 E-value=63 Score=20.37 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=25.1
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 65 ~~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~ga~~~l 104 (133)
T 3b2n_A 65 LEVLAEIRKKHLNIKVIIVTTFKRPG-YFEKAVVNDVDAYV 104 (133)
T ss_dssp HHHHHHHHHTTCSCEEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCCCCcEEEEecCCCHH-HHHHHHHcCCcEEE
Confidence 4778888764 68999999887655 23333446765543
No 291
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=37.81 E-value=72 Score=19.80 Aligned_cols=53 Identities=13% Similarity=0.182 Sum_probs=29.2
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCC----ceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKG----IHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~G----i~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+.++++|++- -+ ....++++++++.. .++++.|+..... .. ..-..|..+|+
T Consensus 50 ~~dlii~d~~l--~~---------------~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~-~~-~~~~~g~~~~l 106 (132)
T 3lte_A 50 EPAIMTLDLSM--PK---------------LDGLDVIRSLRQNKVANQPKILVVSGLDKAK-LQ-QAVTEGADDYL 106 (132)
T ss_dssp CCSEEEEESCB--TT---------------BCHHHHHHHHHTTTCSSCCEEEEECCSCSHH-HH-HHHHHTCCEEE
T ss_pred CCCEEEEecCC--CC---------------CCHHHHHHHHHhcCccCCCeEEEEeCCChHH-HH-HHHHhChHHHh
Confidence 37788888752 11 13357888888753 4455555544443 33 33445665543
No 292
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=37.66 E-value=26 Score=22.31 Aligned_cols=37 Identities=5% Similarity=0.074 Sum_probs=24.7
Q ss_pred HHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 55 GILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 55 e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 76 ~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 114 (135)
T 3snk_A 76 PGIVEARALWATVPLIAVSDELTSE-QTRVLVRMNASDWL 114 (135)
T ss_dssp TTHHHHHGGGTTCCEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHhhCCCCcEEEEeCCCCHH-HHHHHHHcCcHhhc
Confidence 456666654 58999999987766 34445557766554
No 293
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=37.64 E-value=58 Score=19.89 Aligned_cols=38 Identities=11% Similarity=0.079 Sum_probs=25.0
Q ss_pred HHHHHHHHH--CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~--~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ .+.+++++|+..... .....-..|..+|+
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 102 (120)
T 1tmy_A 63 IDAIKEIMKIDPNAKIIVCSAMGQQA-MVIEAIKAGAKDFI 102 (120)
T ss_dssp HHHHHHHHHHCTTCCEEEEECTTCHH-HHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhCCCCeEEEEeCCCCHH-HHHHHHHhCcceeE
Confidence 467777765 368999999887665 34444456765543
No 294
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=37.52 E-value=17 Score=24.64 Aligned_cols=39 Identities=13% Similarity=0.093 Sum_probs=28.8
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.|...+..++.++.|+.+..+|..+... ...+.++.++.
T Consensus 50 ~~~l~~~~~~~~~~~~~~v~vs~d~~~~-~~~~~~~~~~~ 88 (157)
T 4g2e_A 50 MCTFRDSMAKFNQVNAVVLGISVDPPFS-NKAFKEHNKLN 88 (157)
T ss_dssp --CCSCGGGGGGGCSSEEEEEESSCHHH-HHHHHHHTTCC
T ss_pred hhhcccccccccccCceEeeecccchhH-HHHHHHHcCCc
Confidence 4455566777788899998888777777 58888888875
No 295
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=37.33 E-value=11 Score=27.66 Aligned_cols=41 Identities=12% Similarity=-0.155 Sum_probs=30.4
Q ss_pred CCChhHHHHHH--hhC-CCcceEEEeehHhHHHHHHHhCCchhh
Q 032013 99 SCCIMCIIFFL--FFF-SISAFILFVDLFCFMYAAAYVGCDLYV 139 (149)
Q Consensus 99 ~p~p~~~i~~~--~~~-~~~~~l~~eDs~~gi~aa~~ag~~~~~ 139 (149)
.++..+.-++. .++ +++++++|=|+.|.+...+.||.-+.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~ 221 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV 221 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe
Confidence 34444444444 555 889999999999999999999976443
No 296
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=36.95 E-value=26 Score=22.36 Aligned_cols=25 Identities=16% Similarity=0.375 Sum_probs=18.3
Q ss_pred HHHHHHHHHH----CCceEEEEeCCCchH
Q 032013 53 AKGILEALKE----KGIHVAVASRSPAPD 77 (149)
Q Consensus 53 ~~e~L~~Lk~----~Gi~i~IaT~~~~~~ 77 (149)
..++++++++ .+.+++++|+.....
T Consensus 65 g~~~~~~l~~~~~~~~~~ii~~s~~~~~~ 93 (140)
T 3grc_A 65 GVSLIRALRRDSRTRDLAIVVVSANAREG 93 (140)
T ss_dssp HHHHHHHHHTSGGGTTCEEEEECTTHHHH
T ss_pred HHHHHHHHHhCcccCCCCEEEEecCCChH
Confidence 3578888876 478999999876443
No 297
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=36.80 E-value=56 Score=25.37 Aligned_cols=89 Identities=13% Similarity=0.120 Sum_probs=47.0
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCC--------ChhHHH---HH----HhhCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC--------CIMCII---FF----LFFFS 113 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p--------~p~~~i---~~----~~~~~ 113 (149)
++| +..+.++|+++|+.+.++|+...-+ ..++...|+.-......+... .|.-.+ +. .....
T Consensus 16 i~p-alala~~L~~~g~~V~~vg~~~g~e--~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 92 (365)
T 3s2u_A 16 VFP-ALACAREFQARGYAVHWLGTPRGIE--NDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQALRVIRQLR 92 (365)
T ss_dssp HHH-HHHHHHHHHHTTCEEEEEECSSSTH--HHHTGGGTCCEEECC--------------CHHHHHHHHHHHHHHHHHHC
T ss_pred HHH-HHHHHHHHHhCCCEEEEEECCchHh--hchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 443 3567789999999999888654433 345566665422211111110 111000 00 02244
Q ss_pred CcceEEEe--ehHhHHHHHHHhCCchhhh
Q 032013 114 ISAFILFV--DLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 114 ~~~~l~~e--Ds~~gi~aa~~ag~~~~~~ 140 (149)
|+-.+.+- -|..++.||+..|++++++
T Consensus 93 PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 93 PVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 44333332 2455788999999999875
No 298
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=36.21 E-value=1.1e+02 Score=21.33 Aligned_cols=55 Identities=15% Similarity=0.154 Sum_probs=33.6
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH-CCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~-~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
.++++++|++- -+ ..| .++++++++ ...+++++|+..... .....-..|..+|+.
T Consensus 48 ~~dlvllD~~l--~~--------------~~g-~~~~~~l~~~~~~~ii~lt~~~~~~-~~~~~~~~ga~~~l~ 103 (230)
T 2oqr_A 48 GADIVLLDLML--PG--------------MSG-TDVCKQLRARSSVPVIMVTARDSEI-DKVVGLELGADDYVT 103 (230)
T ss_dssp CCSEEEEESSC--SS--------------SCH-HHHHHHHHHHCSCSEEEEECCHHHH-HHHHHHHHCCSCCCC
T ss_pred CCCEEEEECCC--CC--------------CCH-HHHHHHHHcCCCCCEEEEeCCCcHH-HHHHHHHcCCCEEEe
Confidence 37888888752 11 112 356666655 478999999886654 233344567766543
No 299
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=35.85 E-value=48 Score=22.79 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=31.3
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.|...++.++++++|+.+..+|..+... ...+++..++.
T Consensus 71 l~~l~~l~~~~~~~~~~vv~Vs~D~~~~-~~~~~~~~~~~ 109 (179)
T 3ixr_A 71 GLEFNLLLPQFEQINATVLGVSRDSVKS-HDSFCAKQGFT 109 (179)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEESCCHHH-HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHcCCc
Confidence 4566677888888999999999877777 68888888875
No 300
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=35.84 E-value=24 Score=27.18 Aligned_cols=41 Identities=15% Similarity=0.188 Sum_probs=34.1
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
...||-...=+.|++.|+|.+|+|-.+... .+.-++..|+.
T Consensus 75 ~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K-~kd~l~~~g~G 115 (283)
T 1qv9_A 75 PAAPGPSKAREMLADSEYPAVIIGDAPGLK-VKDEMEEQGLG 115 (283)
T ss_dssp TTSHHHHHHHHHHHTSSSCEEEEEEGGGGG-GHHHHHHTTCE
T ss_pred CCCCCchHHHHHHHhCCCCEEEEcCCcchh-hHHHHHhcCCc
Confidence 355777777788899999999999998777 68888988874
No 301
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=35.57 E-value=94 Score=23.13 Aligned_cols=90 Identities=13% Similarity=0.000 Sum_probs=51.6
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCChh-HHHHHHhh--CCCcce-------E
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCIM-CIIFFLFF--FSISAF-------I 118 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~-~~i~~~~~--~~~~~~-------l 118 (149)
...|...+++.++..++++.++-+.+.....+...+.++ +.+.. .+..+++. ..+|.... +.|+.. .
T Consensus 173 ~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~~--~~v~~-~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~ 249 (342)
T 2iuy_A 173 PHKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRYG--STVEP-IGEVGGERRLDLLASAHAVLAMSQAVTGPWGGI 249 (342)
T ss_dssp GGGTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHHT--TTEEE-CCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSC
T ss_pred cccCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHhC--CCEEE-eccCCHHHHHHHHHhCCEEEECCcccccccccc
Confidence 345777777777766899998887654332466666666 22211 23333331 34444322 222210 0
Q ss_pred EEeehHhHHHHHHHhCCchhhhh
Q 032013 119 LFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 119 ~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
..|=.+.-+.-|.++|+++|+..
T Consensus 250 ~~E~~~~~~~EAma~G~PvI~s~ 272 (342)
T 2iuy_A 250 WCEPGATVVSEAAVSGTPVVGTG 272 (342)
T ss_dssp CCCCCCHHHHHHHHTTCCEEECC
T ss_pred cccCccHHHHHHHhcCCCEEEcC
Confidence 14666777889999999998764
No 302
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=35.55 E-value=61 Score=25.19 Aligned_cols=59 Identities=20% Similarity=0.198 Sum_probs=43.9
Q ss_pred cEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcc
Q 032013 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (149)
Q Consensus 23 k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~ 93 (149)
+.++.=+-|..+.. + .....+.+-+..|++.|++++|++|+. .. +...++.+|+...|.
T Consensus 50 k~iVIKlGGs~l~~-----~-----~~~~~l~~~i~~l~~~G~~vVlVhGgG-~~-i~~~~~~~g~~~~~~ 108 (321)
T 2v5h_A 50 RTVVVKYGGAAMKQ-----E-----ELKEAVMRDIVFLACVGMRPVVVHGGG-PE-INAWLGRVGIEPQFH 108 (321)
T ss_dssp CEEEEEECTHHHHS-----H-----HHHHHHHHHHHHHHHTTCEEEEEECCH-HH-HHHHHHHTTCCCCBS
T ss_pred CeEEEEECchhhCC-----c-----hHHHHHHHHHHHHHHCCCEEEEEECCH-HH-HHHHHHHcCCCcccc
Confidence 56889999998862 1 123456677788999999999999983 44 578888999876443
No 303
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=35.43 E-value=81 Score=24.58 Aligned_cols=76 Identities=9% Similarity=0.102 Sum_probs=47.6
Q ss_pred ccHHHHHHHHHHCCceEEEEeCCCc-hHHHHHHHHHcCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehHhHHHH
Q 032013 51 PHAKGILEALKEKGIHVAVASRSPA-PDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLFCFMYA 129 (149)
Q Consensus 51 pg~~e~L~~Lk~~Gi~i~IaT~~~~-~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~gi~a 129 (149)
+.+.++++.+++.|..+. +|++.. .+ ....++..|++.+-.. .+++| .+|-...-. .-+|+....+..
T Consensus 134 ~~l~~ll~~ik~~g~~i~-~t~G~l~~e-~l~~L~~aGvd~v~i~---les~~--e~~~~i~~~----~~~~~~l~~i~~ 202 (369)
T 1r30_A 134 PYLEQMVQGVKAMGLEAC-MTLGTLSES-QAQRLANAGLDYYNHN---LDTSP--EFYGNIITT----RTYQERLDTLEK 202 (369)
T ss_dssp HHHHHHHHHHHHTTSEEE-EECSSCCHH-HHHHHHHHCCCEEECC---CBSCH--HHHHHHCCS----SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEE-EecCCCCHH-HHHHHHHCCCCEEeec---CcCCH--HHHHHhCCC----CCHHHHHHHHHH
Confidence 567788999998888886 576643 34 3556677776543221 12344 555543311 236777888888
Q ss_pred HHHhCCch
Q 032013 130 AAYVGCDL 137 (149)
Q Consensus 130 a~~ag~~~ 137 (149)
++++|+++
T Consensus 203 a~~~Gi~v 210 (369)
T 1r30_A 203 VRDAGIKV 210 (369)
T ss_dssp HHHHHCEE
T ss_pred HHHcCCee
Confidence 88888754
No 304
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=35.27 E-value=41 Score=21.38 Aligned_cols=38 Identities=21% Similarity=0.356 Sum_probs=25.8
Q ss_pred HHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 78 ~~~~~~l~~~~~~~~~~ii~~t~~~~~~-~~~~~~~~g~~~~l 119 (149)
T 1k66_A 78 REVLQEIKQDEVLKKIPVVIMTTSSNPK-DIEICYSYSISSYI 119 (149)
T ss_dssp HHHHHHHTTSTTGGGSCEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhCcccCCCeEEEEeCCCCHH-HHHHHHHCCCCEEE
Confidence 5788888874 57899999887665 34444456765543
No 305
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=35.18 E-value=25 Score=24.85 Aligned_cols=28 Identities=18% Similarity=0.195 Sum_probs=24.5
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
.+.+.++++.++++|.+++.+|+.+...
T Consensus 105 t~~~~~~~~~ak~~g~~vi~IT~~~~s~ 132 (201)
T 3fxa_A 105 TGELLNLIPACKTKGSTLIGVTENPDSV 132 (201)
T ss_dssp CHHHHTTHHHHHHHTCEEEEEESCTTSH
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCCh
Confidence 4678889999999999999999987665
No 306
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=35.02 E-value=54 Score=21.19 Aligned_cols=64 Identities=14% Similarity=0.093 Sum_probs=41.0
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccccc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRL 98 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~ 98 (149)
.++.+++|+-++-.= ++. -..-..++.+++++ |.++.++.-+ +. +...++..|+.+.+...+.+
T Consensus 45 ~~~~vilDl~~v~~i-----Dss-----gl~~L~~~~~~~~~-g~~l~l~~~~--~~-v~~~l~~~gl~~~~~~~~i~ 108 (118)
T 3ny7_A 45 GKRIVILKWDAVPVL-----DAG-----GLDAFQRFVKRLPE-GCELRVCNVE--FQ-PLRTMARAGIQPIPGRLAFF 108 (118)
T ss_dssp TCSEEEEEEEECCCB-----CHH-----HHHHHHHHHHHCCT-TCEEEEECCC--HH-HHHHHHHTTCCCBTTTEEEE
T ss_pred CCcEEEEEcCCCCee-----cHH-----HHHHHHHHHHHHHC-CCEEEEecCC--HH-HHHHHHHcCChhhcChhhhc
Confidence 468899998775432 111 12233466778888 9988877433 44 58899999987766443333
No 307
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=34.91 E-value=52 Score=20.41 Aligned_cols=38 Identities=8% Similarity=0.172 Sum_probs=25.0
Q ss_pred HHHHHHHHH----CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~----~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ ...+++++|+..... .....-..|..+|+
T Consensus 65 ~~l~~~l~~~~~~~~~~ii~~s~~~~~~-~~~~~~~~ga~~~l 106 (128)
T 1jbe_A 65 LELLKTIRAXXAMSALPVLMVTAEAKKE-NIIAAAQAGASGYV 106 (128)
T ss_dssp HHHHHHHHC--CCTTCCEEEEESSCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhhcccCCCcEEEEecCccHH-HHHHHHHhCcCcee
Confidence 477888876 357899999887665 34444456765543
No 308
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=34.86 E-value=16 Score=30.61 Aligned_cols=18 Identities=28% Similarity=0.390 Sum_probs=15.5
Q ss_pred CCCccEEEEecCCccccc
Q 032013 19 ENLPRLVVFDLDYTLWPF 36 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld~ 36 (149)
...++++-||+|.||...
T Consensus 14 L~~i~~iGFDmDyTLa~Y 31 (470)
T 4g63_A 14 MRKIKLIGLDMDHTLIRY 31 (470)
T ss_dssp TTSCCEEEECTBTTTBEE
T ss_pred cccCCEEEECCccchhcc
Confidence 455899999999999974
No 309
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=34.84 E-value=49 Score=23.95 Aligned_cols=28 Identities=11% Similarity=0.196 Sum_probs=24.8
Q ss_pred CccHHHHHHHHHH--CCceEEEEeCCCchH
Q 032013 50 YPHAKGILEALKE--KGIHVAVASRSPAPD 77 (149)
Q Consensus 50 ~pg~~e~L~~Lk~--~Gi~i~IaT~~~~~~ 77 (149)
.+.+.++++.+++ +|.+++.+|+.+...
T Consensus 119 t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~ 148 (220)
T 3etn_A 119 TREIVELTQLAHNLNPGLKFIVITGNPDSP 148 (220)
T ss_dssp CHHHHHHHHHHHHHCTTCEEEEEESCTTSH
T ss_pred CHHHHHHHHHHHhcCCCCeEEEEECCCCCh
Confidence 4788899999999 999999999987665
No 310
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=34.60 E-value=33 Score=23.45 Aligned_cols=66 Identities=20% Similarity=0.241 Sum_probs=37.3
Q ss_pred CccEEEEecCCccccc------------cccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCc--hHHHHHHHHHc
Q 032013 21 LPRLVVFDLDYTLWPF------------YCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA--PDIAKTFLHKL 86 (149)
Q Consensus 21 ~~k~vifDlDGTLld~------------~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~--~~i~~~~l~~~ 86 (149)
.|..-+.|.||.-++. +..|++.. ....|...++.+.+++.++.++.++.... .. ...+++..
T Consensus 40 ~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C--~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~-~~~~~~~~ 116 (186)
T 1jfu_A 40 LPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPC--RKEMPALDELQGKLSGPNFEVVAINIDTRDPEK-PKTFLKEA 116 (186)
T ss_dssp CCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHH--HHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTH-HHHHHHHT
T ss_pred CCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhH--HHHHHHHHHHHHHhccCCcEEEEEECCCCCHHH-HHHHHHHc
Confidence 3566777888864432 21222211 11233444555555556888888885543 45 57888888
Q ss_pred CCC
Q 032013 87 GIH 89 (149)
Q Consensus 87 gl~ 89 (149)
++.
T Consensus 117 ~~~ 119 (186)
T 1jfu_A 117 NLT 119 (186)
T ss_dssp TCC
T ss_pred CCC
Confidence 874
No 311
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=34.55 E-value=71 Score=19.41 Aligned_cols=38 Identities=8% Similarity=0.129 Sum_probs=25.2
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 60 ~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 99 (121)
T 2pl1_A 60 LSLIRRWRSNDVSLPILVLTARESWQ-DKVEVLSAGADDYV 99 (121)
T ss_dssp HHHHHHHHHTTCCSCEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEecCCCHH-HHHHHHHcCccceE
Confidence 4677777764 67899999887665 34444456765543
No 312
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=34.30 E-value=93 Score=23.86 Aligned_cols=30 Identities=7% Similarity=0.061 Sum_probs=22.2
Q ss_pred HHHHHHHHCCceEEEEeCCCchHHHHHHHHH
Q 032013 55 GILEALKEKGIHVAVASRSPAPDIAKTFLHK 85 (149)
Q Consensus 55 e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~ 85 (149)
...+.+.+.|+++.|++++.... +..++..
T Consensus 243 ~Aa~~a~~~Gi~v~I~~g~~p~~-l~~~l~G 272 (281)
T 3nwy_A 243 TAFSLCMDNGMPILVFNLLTDGN-IARAVRG 272 (281)
T ss_dssp HHHHHHHTTTCCEEEEETTSTTH-HHHHHHT
T ss_pred HHHHHHHHCCCeEEEecCCCchH-HHHHHcC
Confidence 45667778899999888887776 4666654
No 313
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=34.21 E-value=1.2e+02 Score=27.77 Aligned_cols=47 Identities=11% Similarity=0.282 Sum_probs=32.2
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEe
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT 71 (149)
...+.+|+|.+=-+.+..+.-+. .-+|+..+++++|+++|+++++.-
T Consensus 464 lDvi~lD~~y~~~~~~~dFtwD~---~rFPdp~~mv~~Lh~~G~k~vl~V 510 (1020)
T 2xvl_A 464 IDNIVLDWSYWPEDAWGSHDFDK---QFFPDPKALVDKVHAMNAQIMISV 510 (1020)
T ss_dssp CCEEEECSCCSCTTCTTSCCCCT---TTCSCHHHHHHHHHHTTCEEEEEE
T ss_pred cceEEEeccccccCcccceEECh---hhCCCHHHHHHHHHHCCCEEEEEE
Confidence 46789999876322222221121 367889999999999999998743
No 314
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=34.20 E-value=48 Score=20.63 Aligned_cols=38 Identities=13% Similarity=0.213 Sum_probs=24.7
Q ss_pred HHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 67 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 108 (129)
T 1p6q_A 67 LGLLQAVRANPATKKAAFIILTAQGDRA-LVQKAAALGANNVL 108 (129)
T ss_dssp HHHHHHHTTCTTSTTCEEEECCSCCCHH-HHHHHHHHTCSCEE
T ss_pred HHHHHHHhcCccccCCCEEEEeCCCCHH-HHHHHHHcCCCEEE
Confidence 4678888763 67888888877655 33334456765543
No 315
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=33.93 E-value=95 Score=20.00 Aligned_cols=40 Identities=20% Similarity=0.196 Sum_probs=26.3
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchH
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPD 77 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~ 77 (149)
.+.++++|++-. + ....++++.+++. ..+++++|+.....
T Consensus 51 ~~dlvi~d~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~ 92 (154)
T 2rjn_A 51 SVQLVISDMRMP--E---------------MGGEVFLEQVAKSYPDIERVVISGYADAQ 92 (154)
T ss_dssp CCSEEEEESSCS--S---------------SCHHHHHHHHHHHCTTSEEEEEECGGGHH
T ss_pred CCCEEEEecCCC--C---------------CCHHHHHHHHHHhCCCCcEEEEecCCCHH
Confidence 378888887521 1 1224677777663 68999999887654
No 316
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=33.65 E-value=75 Score=22.88 Aligned_cols=39 Identities=13% Similarity=0.165 Sum_probs=30.1
Q ss_pred CccHHHHHHHHHHCCc-eEEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGI-HVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi-~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.|...+..+.++++|+ .+..+|..+... ...+.+..++.
T Consensus 54 ~~~l~~~~~~~~~~~~~~vv~is~d~~~~-~~~~~~~~~~~ 93 (241)
T 1nm3_A 54 LPRYNELAPVFKKYGVDDILVVSVNDTFV-MNAWKEDEKSE 93 (241)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSCHHH-HHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEcCCHHH-HHHHHHhcCCC
Confidence 4566677778888999 888888766666 68888888875
No 317
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=33.60 E-value=1.2e+02 Score=26.19 Aligned_cols=45 Identities=11% Similarity=0.313 Sum_probs=31.9
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEe
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT 71 (149)
...+.+|+|-+ +.+..+.-+. ..+|+..+++++|+++|+++++..
T Consensus 194 ~dvi~lD~dy~--~~~~~ft~d~---~~FPdp~~mv~~Lh~~G~k~v~~i 238 (666)
T 3nsx_A 194 IDMIYMDIDYM--QDFKDFTVNE---KNFPDFPEFVKEMKDQELRLIPII 238 (666)
T ss_dssp CCEEEECGGGS--STTCTTCCCT---TTCTTHHHHHHHHHTTTCEEEEEE
T ss_pred cceEEEecHHH--HhhcccccCh---hhCCCHHHHHHHHHHcCceEEeee
Confidence 47899999864 2222221121 367899999999999999998765
No 318
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=33.49 E-value=55 Score=21.00 Aligned_cols=23 Identities=9% Similarity=0.075 Sum_probs=16.5
Q ss_pred HHHHHHHHH--CCceEEEEeCCCch
Q 032013 54 KGILEALKE--KGIHVAVASRSPAP 76 (149)
Q Consensus 54 ~e~L~~Lk~--~Gi~i~IaT~~~~~ 76 (149)
.++++++++ .+.+++++|+....
T Consensus 65 ~~l~~~l~~~~~~~~ii~ls~~~~~ 89 (141)
T 3cu5_A 65 IELVDNILKLYPDCSVIFMSGYSDK 89 (141)
T ss_dssp HHHHHHHHHHCTTCEEEEECCSTTT
T ss_pred HHHHHHHHhhCCCCcEEEEeCCCcH
Confidence 467777765 36889999987644
No 319
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=33.33 E-value=84 Score=19.70 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=24.8
Q ss_pred HHHHHHHHH--CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~--~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ .+.+++++|+..... .....-..|..+|+
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~ga~~~l 102 (132)
T 3crn_A 63 TELLEKAHKLRPGMKKIMVTGYASLE-NSVFSLNAGADAYI 102 (132)
T ss_dssp HHHHHHHHHHCTTSEEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhhCCCCcEEEEeccccHH-HHHHHHhccchhhc
Confidence 467777765 368999999887655 34444456765544
No 320
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=33.19 E-value=46 Score=22.87 Aligned_cols=37 Identities=16% Similarity=0.097 Sum_probs=27.5
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
..|...++.+.++++|+.++.+|..+... ...+.+..
T Consensus 50 ~~~~l~~~~~~~~~~~v~vv~vs~d~~~~-~~~~~~~~ 86 (187)
T 1we0_A 50 ELEDVQKEYAELKKLGVEVYSVSTDTHFV-HKAWHENS 86 (187)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEESSCHHH-HHHHHHSC
T ss_pred HHHHHHHHHHHHHHcCCEEEEEECCCHHH-HHHHHHHh
Confidence 45566677778888899999999777666 56666665
No 321
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=33.05 E-value=46 Score=23.48 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=30.7
Q ss_pred CccHHHHHHHHHHCCce-EEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIH-VAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~-i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.|...+..++++++|+. ++.+|..+... .+.+.++.++.
T Consensus 77 ~p~l~~~~~~~~~~gv~~vv~Is~d~~~~-~~~f~~~~~~~ 116 (184)
T 3uma_A 77 LPGYLENRDAILARGVDDIAVVAVNDLHV-MGAWATHSGGM 116 (184)
T ss_dssp HHHHHHTHHHHHTTTCCEEEEEESSCHHH-HHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECCCHHH-HHHHHHHhCCC
Confidence 35666777888889999 88888777666 68889998886
No 322
>1f2r_I Inhibitor of caspase-activated DNAse; alpha-beta roll, protein-protein complex, DNA binding protein; NMR {Mus musculus} SCOP: d.15.2.1
Probab=33.05 E-value=77 Score=20.74 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=21.6
Q ss_pred cHHHhHHHHHhhhhccCC-CccEEEEecCCcccccccc
Q 032013 3 DLEKVKNEALEIIGQFEN-LPRLVVFDLDYTLWPFYCE 39 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-~~k~vifDlDGTLld~~~~ 39 (149)
.|+++..++......... .+-.++++-|||.++.+-+
T Consensus 38 SL~EL~~K~~~~l~l~~~~~~~~lvLeeDGT~VddEeY 75 (100)
T 1f2r_I 38 SLEELRSKACELLAIDKSLTPITLVLAEDGTIVDDDDY 75 (100)
T ss_dssp SHHHHHHHHHHHHCCCGGGCSCEEEESSSCCBCCSSSS
T ss_pred CHHHHHHHHHHHhccCCCCCceEEEEeeCCcEEechhH
Confidence 356666666443222111 2456888999999975433
No 323
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=32.84 E-value=1.3e+02 Score=21.90 Aligned_cols=82 Identities=10% Similarity=-0.094 Sum_probs=46.1
Q ss_pred HHHHHHHHCCceEEEEeCCCchHH--HHHHHHHcCCCC--CcccccccCCChhHHHHHHhhCCCcceEEEeehHhHHHHH
Q 032013 55 GILEALKEKGIHVAVASRSPAPDI--AKTFLHKLGIHS--MFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLFCFMYAA 130 (149)
Q Consensus 55 e~L~~Lk~~Gi~i~IaT~~~~~~i--~~~~l~~~gl~~--~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa 130 (149)
+-|+.+-+...+++++.++....+ +-..+++.|-.- ..+.+.+.+++..+..|++...+|+ =++.=-.+.+..|
T Consensus 20 ~~l~~al~s~~~~ifll~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pd--GIIsTk~~~i~~A 97 (192)
T 3kts_A 20 KDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPD--GIISTRGNAIMKA 97 (192)
T ss_dssp HHHHHHTTSSCCEEEECSEETTTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCS--EEEESCHHHHHHH
T ss_pred HHHHHHHcCCCCEEEEecCcHHHHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCCC--EEEeCcHHHHHHH
Confidence 334554444566777766654431 223334444221 2334467788888888888655553 3344456667777
Q ss_pred HHhCCchh
Q 032013 131 AYVGCDLY 138 (149)
Q Consensus 131 ~~ag~~~~ 138 (149)
++.|+.+|
T Consensus 98 k~~gL~tI 105 (192)
T 3kts_A 98 KQHKMLAI 105 (192)
T ss_dssp HHTTCEEE
T ss_pred HHCCCeEE
Confidence 77776554
No 324
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=32.41 E-value=78 Score=22.50 Aligned_cols=39 Identities=21% Similarity=0.119 Sum_probs=31.8
Q ss_pred CccHHHHHHHHHHCCc-eEEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGI-HVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi-~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.++..+..++++++|. .++.+|-.+... ...+.+..++.
T Consensus 68 l~~f~~~~~ef~~~g~d~VigIS~D~~~~-~~~f~~~~~l~ 107 (176)
T 4f82_A 68 VPGYVEHAEQLRAAGIDEIWCVSVNDAFV-MGAWGRDLHTA 107 (176)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSCHHH-HHHHHHHTTCT
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCCCHHH-HHHHHHHhCCC
Confidence 4667788899999999 888888777776 58888888886
No 325
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=32.33 E-value=51 Score=21.80 Aligned_cols=40 Identities=20% Similarity=0.368 Sum_probs=26.4
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCC--------CchHHHHHH-HHHcCCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRS--------PAPDIAKTF-LHKLGIH 89 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~i~~~~-l~~~gl~ 89 (149)
..|...++.+.++++|+.++.+|.. .... +... .+..++.
T Consensus 49 ~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~-~~~~~~~~~~~~ 97 (169)
T 2v1m_A 49 NYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAE-IKKFVTEKYGVQ 97 (169)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHH-HHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHH-HHHHHHHhcCCC
Confidence 3455666777777788999888853 2244 4666 4777764
No 326
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=32.23 E-value=71 Score=19.73 Aligned_cols=40 Identities=15% Similarity=0.127 Sum_probs=26.9
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC----CceEEEEeCCCchH
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPD 77 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~----Gi~i~IaT~~~~~~ 77 (149)
.+.++++|++-. + ....++++++++. +.+++++|+.....
T Consensus 47 ~~dlii~D~~l~--~---------------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~ 90 (127)
T 3i42_A 47 GYDAVFIDLNLP--D---------------TSGLALVKQLRALPMEKTSKFVAVSGFAKND 90 (127)
T ss_dssp CCSEEEEESBCS--S---------------SBHHHHHHHHHHSCCSSCCEEEEEECC-CTT
T ss_pred CCCEEEEeCCCC--C---------------CCHHHHHHHHHhhhccCCCCEEEEECCcchh
Confidence 378888887521 1 1335788888874 68999999877655
No 327
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=32.22 E-value=32 Score=24.56 Aligned_cols=28 Identities=4% Similarity=-0.091 Sum_probs=22.9
Q ss_pred CccHHHHHHHHHHCCceEEEEeC-CCchH
Q 032013 50 YPHAKGILEALKEKGIHVAVASR-SPAPD 77 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~-~~~~~ 77 (149)
.+...++.++++++|.+++.+|| .....
T Consensus 90 n~~~ie~A~~ake~G~~vIaITs~~~~~~ 118 (170)
T 3jx9_A 90 RSDLLASLARYDAWHTPYSIITLGDVTET 118 (170)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEESSCCCTT
T ss_pred CHHHHHHHHHHHHCCCcEEEEeCcchhcc
Confidence 35678999999999999999999 44433
No 328
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=32.14 E-value=30 Score=21.80 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=18.3
Q ss_pred HHHHHHHHHHC----CceEEEEeCCCchH
Q 032013 53 AKGILEALKEK----GIHVAVASRSPAPD 77 (149)
Q Consensus 53 ~~e~L~~Lk~~----Gi~i~IaT~~~~~~ 77 (149)
..++++++++. +.+++++|+.....
T Consensus 62 g~~~~~~l~~~~~~~~~pii~~s~~~~~~ 90 (133)
T 3nhm_A 62 GYALCGHFRSEPTLKHIPVIFVSGYAPRT 90 (133)
T ss_dssp HHHHHHHHHHSTTTTTCCEEEEESCCC--
T ss_pred HHHHHHHHHhCCccCCCCEEEEeCCCcHh
Confidence 35788888875 78999999887554
No 329
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=32.12 E-value=1.2e+02 Score=20.58 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=24.1
Q ss_pred HHHHHHH--CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 56 ILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 56 ~L~~Lk~--~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
+.+.+++ ...+++++|+..... .....-..|..+|+
T Consensus 69 l~~~~~~~~~~~~ii~lt~~~~~~-~~~~a~~~ga~~~l 106 (196)
T 1qo0_D 69 IAALLAAGTPRTTLVALVEYESPA-VLSQIIELECHGVI 106 (196)
T ss_dssp HHHHHHHSCTTCEEEEEECCCSHH-HHHHHHHHTCSEEE
T ss_pred HHHHHhccCCCCCEEEEEcCCChH-HHHHHHHcCCCeeE
Confidence 5566665 478999999987766 34444556776554
No 330
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=32.08 E-value=33 Score=22.51 Aligned_cols=40 Identities=15% Similarity=0.049 Sum_probs=26.8
Q ss_pred cCccHHHHHHHH-HHCCceEEEEeCCCc-hHHHHHHHHHcCCC
Q 032013 49 LYPHAKGILEAL-KEKGIHVAVASRSPA-PDIAKTFLHKLGIH 89 (149)
Q Consensus 49 ~~pg~~e~L~~L-k~~Gi~i~IaT~~~~-~~i~~~~l~~~gl~ 89 (149)
..|...++.+.+ +++|+.++-+|-... .. ....++..++.
T Consensus 53 ~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~-~~~~~~~~~~~ 94 (150)
T 3fw2_A 53 SNSELREIYKKYKKNKYIGMLGISLDVDKQQ-WKDAIKRDTLD 94 (150)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEEECCSCHHH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHHhccCCCeEEEEEEcCCCHHH-HHHHHHHhCCC
Confidence 344555666666 566788888875544 55 68888888874
No 331
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=31.94 E-value=96 Score=24.31 Aligned_cols=38 Identities=13% Similarity=0.285 Sum_probs=27.8
Q ss_pred ccHHHHHHHHHHCCceEEEEeCCCc--------------hHHHHHHHHHcCCC
Q 032013 51 PHAKGILEALKEKGIHVAVASRSPA--------------PDIAKTFLHKLGIH 89 (149)
Q Consensus 51 pg~~e~L~~Lk~~Gi~i~IaT~~~~--------------~~i~~~~l~~~gl~ 89 (149)
.|..++.+++|++|.+++|=++... +. ....+...|++
T Consensus 74 ~Gl~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~-~~~~~~~wGvd 125 (362)
T 1uas_A 74 SGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQ-DVKTFASWGVD 125 (362)
T ss_dssp TCHHHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHH-HHHHHHHHTCC
T ss_pred ccHHHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHH-HHHHHHHcCCC
Confidence 4699999999999999999774321 22 34566777874
No 332
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=31.68 E-value=92 Score=23.14 Aligned_cols=29 Identities=17% Similarity=0.141 Sum_probs=19.7
Q ss_pred HHHHHHHHCCceEEEEeCCCchHHHHHHHH
Q 032013 55 GILEALKEKGIHVAVASRSPAPDIAKTFLH 84 (149)
Q Consensus 55 e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~ 84 (149)
++...+.+.|+++.|++++.... +...+.
T Consensus 218 ~aa~~a~~~gv~v~I~~g~~~~~-l~~~l~ 246 (256)
T 2va1_A 218 TALALCQENNINLLVFNIDKPNA-IVDVLE 246 (256)
T ss_dssp HHHHHHHHTTCEEEEEESSSTTH-HHHHHT
T ss_pred HHHHHHHHCCCeEEEEeCCCchH-HHHHHc
Confidence 34566677889988888877666 455443
No 333
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=31.63 E-value=54 Score=22.84 Aligned_cols=38 Identities=26% Similarity=0.172 Sum_probs=29.5
Q ss_pred ccHHHHHHHHHHCCceEE-EEeCCCchHHHHHHHHHcCCC
Q 032013 51 PHAKGILEALKEKGIHVA-VASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 51 pg~~e~L~~Lk~~Gi~i~-IaT~~~~~~i~~~~l~~~gl~ 89 (149)
|...+..++++++|+.++ ++|..+... .+.+.+..++.
T Consensus 65 p~l~~~~~~~~~~gv~vv~~iS~D~~~~-~~~f~~~~~~~ 103 (173)
T 3mng_A 65 PGFVEQAEALKAKGVQVVACLSVNDAFV-TGEWGRAHKAE 103 (173)
T ss_dssp HHHHHTHHHHHTTTCCEEEEEESSCHHH-HHHHHHHTTCT
T ss_pred HHHHHHHHHHHhCCCEEEEEEcCCCHHH-HHHHHHHhCCC
Confidence 556667788888999987 478776666 68889998876
No 334
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=31.34 E-value=43 Score=25.75 Aligned_cols=29 Identities=17% Similarity=0.143 Sum_probs=25.5
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.|.+.+++++++++|.+++.+|+.+...
T Consensus 152 ~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~ 180 (306)
T 1nri_A 152 RTPYVIAGLQYAKSLGALTISIASNPKSE 180 (306)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEEESSTTCH
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCCCh
Confidence 34788999999999999999999987665
No 335
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=31.17 E-value=91 Score=21.52 Aligned_cols=37 Identities=3% Similarity=-0.036 Sum_probs=27.2
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
..|...++.++++++|+.++.+|..+... ...+.+..
T Consensus 64 ~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~-~~~~~~~~ 100 (195)
T 2bmx_A 64 EIAAFSKLNDEFEDRDAQILGVSIDSEFA-HFQWRAQH 100 (195)
T ss_dssp HHHHHHHTHHHHHTTTEEEEEEESSCHHH-HHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCHHH-HHHHHHHh
Confidence 34555666677777799999999877666 57777776
No 336
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=31.13 E-value=93 Score=19.73 Aligned_cols=38 Identities=16% Similarity=0.258 Sum_probs=24.9
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 64 ~~l~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~ga~~~l 103 (137)
T 3cfy_A 64 EDVLDWINQNDIPTSVIIATAHGSVD-LAVNLIQKGAEDFL 103 (137)
T ss_dssp HHHHHHHHHTTCCCEEEEEESSCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEEecCcHH-HHHHHHHCCccEEE
Confidence 4678888774 57899999877655 33444456765543
No 337
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=30.75 E-value=94 Score=23.37 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=47.5
Q ss_pred HHHhhhhccCCCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 10 ~~~~~~~~~~~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
++...+.... -+.++.=+-|+.+.. + .....+.+-+..|++.|++++|++|.. .. +...++.+++.
T Consensus 11 ~~~pyi~~~~--~~~iViKlGGs~l~~-----~-----~~~~~~~~~i~~l~~~G~~vVlVhGgG-~~-i~~~~~~~~~~ 76 (282)
T 2bty_A 11 EALPYIKEFY--GKTFVIKFGGSAMKQ-----E-----NAKKAFIQDIILLKYTGIKPIIVHGGG-PA-ISQMMKDLGIE 76 (282)
T ss_dssp HHHHHHHHHT--TCEEEEEECSHHHHS-----H-----HHHHHHHHHHHHHHHTTCEEEEEECCS-HH-HHHHHHHHTCC
T ss_pred HHHHHHHHhc--CCeEEEEECchhhCC-----h-----hHHHHHHHHHHHHHHCCCcEEEEECCc-HH-HHHHHHHcCCC
Confidence 3444443333 356899999998862 1 123456677888999999999999964 44 57888888886
Q ss_pred CCc
Q 032013 90 SMF 92 (149)
Q Consensus 90 ~~f 92 (149)
..|
T Consensus 77 ~~~ 79 (282)
T 2bty_A 77 PVF 79 (282)
T ss_dssp CCB
T ss_pred ccc
Confidence 544
No 338
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=30.70 E-value=89 Score=19.06 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=23.8
Q ss_pred HHHHHHHHH-CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~-~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ ...+++++|+..... .....-..|..+|+
T Consensus 63 ~~~~~~l~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 101 (123)
T 1xhf_A 63 LLLARELREQANVALMFLTGRDNEV-DKILGLEIGADDYI 101 (123)
T ss_dssp HHHHHHHHHHCCCEEEEEESCCSHH-HHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCcEEEEECCCChH-HHHHHHhcCcceEE
Confidence 356666665 478899999877655 33334456765543
No 339
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=30.39 E-value=48 Score=22.63 Aligned_cols=36 Identities=8% Similarity=-0.010 Sum_probs=20.4
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE 62 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~ 62 (149)
+.++++|=||++...+..... .-.|...++|+.+++
T Consensus 122 p~tflID~~G~I~~~~~~~~~-----~~~~~~~eil~~l~~ 157 (164)
T 4gqc_A 122 RAVFIVKPDGTVAYKWVTDNP-----LNEPDYDEVVREANK 157 (164)
T ss_dssp CEEEEECTTSBEEEEEECSCT-----TCCCCHHHHHHHHHH
T ss_pred eEEEEECCCCEEEEEEEeCCC-----CCCCCHHHHHHHHHH
Confidence 456888999998743221111 122456677766654
No 340
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=30.35 E-value=35 Score=23.71 Aligned_cols=40 Identities=20% Similarity=0.288 Sum_probs=27.7
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCC--------CchHHHHHHH-HHcCCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRS--------PAPDIAKTFL-HKLGIH 89 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~i~~~~l-~~~gl~ 89 (149)
..|...++.+.++++|+.++.+|-. +.+. +..++ +..++.
T Consensus 66 ~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~-~~~~~~~~~~~~ 114 (190)
T 2vup_A 66 GYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEE-IKEFVCTKFKAE 114 (190)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHH-HHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHH-HHHHHHHhcCCC
Confidence 4455667777777788999988854 3445 56777 777765
No 341
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=30.29 E-value=1.1e+02 Score=19.85 Aligned_cols=83 Identities=14% Similarity=0.185 Sum_probs=46.1
Q ss_pred ccHHHHHHHHHH----CCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCCh-hHHHHHH--hhCCCcceEEEeeh
Q 032013 51 PHAKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI-MCIIFFL--FFFSISAFILFVDL 123 (149)
Q Consensus 51 pg~~e~L~~Lk~----~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p-~~~i~~~--~~~~~~~~l~~eDs 123 (149)
.|...+++.++. .++++.++-+++...-.....+..++.-.| +.-|.. ...+|.. ..+.|+. .|-.
T Consensus 15 Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~----g~~~~~~~~~~~~~adv~v~ps~---~e~~ 87 (166)
T 3qhp_A 15 KNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF----GFVNSNELLEILKTCTLYVHAAN---VESE 87 (166)
T ss_dssp TTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC----CCCCHHHHHHHHTTCSEEEECCC---SCCC
T ss_pred cCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE----eecCHHHHHHHHHhCCEEEECCc---ccCc
Confidence 355544444443 367888877655433257777888872222 333332 1222222 2233322 3666
Q ss_pred HhHHHHHHHhCC-chhhh
Q 032013 124 FCFMYAAAYVGC-DLYVY 140 (149)
Q Consensus 124 ~~gi~aa~~ag~-~~~~~ 140 (149)
+.-+.-|.++|+ +++..
T Consensus 88 ~~~~~Eama~G~vPvi~~ 105 (166)
T 3qhp_A 88 AIACLEAISVGIVPVIAN 105 (166)
T ss_dssp CHHHHHHHHTTCCEEEEC
T ss_pred cHHHHHHHhcCCCcEEee
Confidence 778888999998 88873
No 342
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=30.20 E-value=81 Score=19.99 Aligned_cols=38 Identities=3% Similarity=-0.063 Sum_probs=24.7
Q ss_pred HHHHHHHHHC-CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~-Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 64 ~~l~~~l~~~~~~~ii~ls~~~~~~-~~~~~~~~ga~~~l 102 (136)
T 2qzj_A 64 WTLCKKIRNVTTCPIVYMTYINEDQ-SILNALNSGGDDYL 102 (136)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCCHH-HHHHHHHTTCCEEE
T ss_pred HHHHHHHccCCCCCEEEEEcCCCHH-HHHHHHHcCCcEEE
Confidence 4677888765 68899999877655 23334446665543
No 343
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=30.13 E-value=42 Score=20.69 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=20.7
Q ss_pred HHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 61 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 102 (124)
T 1mb3_A 61 LEVTKWLKEDDDLAHIPVVAVTAFAMKG-DEERIREGGCEAYI 102 (124)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEC-------CHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCccccCCcEEEEECCCCHH-HHHHHHhCCCCEEE
Confidence 4788888873 67899999875544 23333456765543
No 344
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=29.90 E-value=1.2e+02 Score=21.43 Aligned_cols=54 Identities=13% Similarity=-0.105 Sum_probs=38.1
Q ss_pred EEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCC---c---hHHHHHHHHHcCCC
Q 032013 26 VFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP---A---PDIAKTFLHKLGIH 89 (149)
Q Consensus 26 ifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~---~---~~i~~~~l~~~gl~ 89 (149)
+-|=||||+=+ .+ .+.-|..-.++..++.+.|+.++.=.. . .. +..++...++.
T Consensus 71 V~DSDgTLI~~------~g---~lsGGT~lT~~~a~~~~KP~l~i~l~~~~~~~~~~~-v~~wl~~~~i~ 130 (158)
T 3imk_A 71 VLDSDGTLIIS------HG---ILKGGSALTEFFAEQYKKPCLHIDLDRISIEDAATL-INSWTVSHHIQ 130 (158)
T ss_dssp HHTSSEEEEEE------SS---SCCHHHHHHHHHHHHTTCCEEEEETTTSCHHHHHHH-HHHHHHHTTCC
T ss_pred hhhcCeEEEEe------cC---CCCCchHHHHHHHHHhCCCEEEEecccccccchHHH-HHHHHHHCCce
Confidence 45789999962 12 477899999999999999999997543 1 22 34555555553
No 345
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=29.84 E-value=29 Score=23.80 Aligned_cols=66 Identities=15% Similarity=0.148 Sum_probs=39.6
Q ss_pred ccEEEEecCCccccc------------cccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC--------CchHHHHH
Q 032013 22 PRLVVFDLDYTLWPF------------YCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS--------PAPDIAKT 81 (149)
Q Consensus 22 ~k~vifDlDGTLld~------------~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~i~~~ 81 (149)
|..-+.|+||.-+.. |..|++.. ....|...++.+.++++|+.++-+|.. +... +..
T Consensus 19 p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C--~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~-~~~ 95 (180)
T 3kij_A 19 YAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLT--DRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKE-VES 95 (180)
T ss_dssp GGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTH--HHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHH-HHH
T ss_pred cceEEecCCCCEecHHHcCCCEEEEEEEecCCCCc--HHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHH-HHH
Confidence 566677888864442 11122211 123455666677777778888888743 3455 577
Q ss_pred HHHH-cCCCC
Q 032013 82 FLHK-LGIHS 90 (149)
Q Consensus 82 ~l~~-~gl~~ 90 (149)
+++. .++..
T Consensus 96 ~~~~~~~~~~ 105 (180)
T 3kij_A 96 FARKNYGVTF 105 (180)
T ss_dssp HHHHHHCCCS
T ss_pred HHHHhcCCCC
Confidence 8888 77753
No 346
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=29.78 E-value=89 Score=21.13 Aligned_cols=15 Identities=27% Similarity=0.654 Sum_probs=13.1
Q ss_pred CccEEEEecCCcccc
Q 032013 21 LPRLVVFDLDYTLWP 35 (149)
Q Consensus 21 ~~k~vifDlDGTLld 35 (149)
.|..++||-||.+..
T Consensus 104 ~Pt~~~~d~~G~~~~ 118 (164)
T 1sen_A 104 IPRILFLDPSGKVHP 118 (164)
T ss_dssp SSEEEEECTTSCBCT
T ss_pred CCeEEEECCCCCEEE
Confidence 578899999999886
No 347
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=29.74 E-value=59 Score=21.24 Aligned_cols=39 Identities=21% Similarity=0.142 Sum_probs=25.1
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCC-chHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSP-APDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~-~~~i~~~~l~~~gl~ 89 (149)
.|...++.+.+.++|+.++-++... ... ....++..++.
T Consensus 48 ~~~l~~l~~~~~~~~~~vv~v~~d~~~~~-~~~~~~~~~~~ 87 (152)
T 2lrn_A 48 TPYLLKTYNAFKDKGFTIYGVSTDRREED-WKKAIEEDKSY 87 (152)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEECCSCHHH-HHHHHHHHTCC
T ss_pred HHHHHHHHHHhccCCeEEEEEEccCCHHH-HHHHHHHhCCC
Confidence 3445555666666778888887553 445 57777777764
No 348
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=29.71 E-value=45 Score=21.87 Aligned_cols=39 Identities=23% Similarity=0.387 Sum_probs=27.2
Q ss_pred CccHHHHHHHHHHCCceEEEEeC-------CCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIHVAVASR-------SPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~-------~~~~~i~~~~l~~~gl~ 89 (149)
.|...++.+.++++|+.++-++. .+... +...++..++.
T Consensus 50 ~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 95 (160)
T 3lor_A 50 VPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEA-LKVFIDEFGIK 95 (160)
T ss_dssp HHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHH-HHHHHHHTTCC
T ss_pred hHHHHHHHHHhCcCCcEEEEEeccccccccCCHHH-HHHHHHHcCCC
Confidence 45555666666667888888874 45566 68888888876
No 349
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=29.65 E-value=55 Score=20.46 Aligned_cols=57 Identities=19% Similarity=0.269 Sum_probs=39.6
Q ss_pred ccEEEEecCCccc-cccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 22 PRLVVFDLDYTLW-PFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 22 ~k~vifDlDGTLl-d~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
++.+++|+.++=. | +. -..-..++.++++++|.++.++.-+ +. +...++..|+...|
T Consensus 43 ~~~vvlDls~v~~iD------ss-----gl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~ 100 (116)
T 1th8_B 43 IRHIVLNLGQLTFMD------SS-----GLGVILGRYKQIKNVGGQMVVCAVS--PA-VKRLFDMSGLFKII 100 (116)
T ss_dssp CCEEEEEEEEEEEEC------HH-----HHHHHHHHHHHHHHTTCCEEEESCC--HH-HHHHHHHHTGGGTS
T ss_pred CcEEEEECCCCcEEc------cH-----HHHHHHHHHHHHHHhCCeEEEEeCC--HH-HHHHHHHhCCceeE
Confidence 5779999988743 3 11 1223346778889999998876543 44 58889999987766
No 350
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=29.47 E-value=20 Score=30.79 Aligned_cols=20 Identities=30% Similarity=0.057 Sum_probs=16.2
Q ss_pred CCccEEEEecCCcccccccc
Q 032013 20 NLPRLVVFDLDYTLWPFYCE 39 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~ 39 (149)
..++.++||-.|||+.+...
T Consensus 324 g~v~~i~fDKTGTLT~~~~~ 343 (645)
T 3j08_A 324 EKVTAVIFDKTGTLTKGKPE 343 (645)
T ss_dssp GGCCEEEEEGGGTSSSSCCE
T ss_pred hCCCEEEEcCcccccCCCeE
Confidence 44789999999999986443
No 351
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=29.34 E-value=1.2e+02 Score=24.01 Aligned_cols=82 Identities=12% Similarity=0.159 Sum_probs=45.4
Q ss_pred HHHHHHHHCCce-EEEEeCCCch-HHHHHHHHHcCCC--CCcccccccCCChhHHHHHH---------hhCCCcceEEEe
Q 032013 55 GILEALKEKGIH-VAVASRSPAP-DIAKTFLHKLGIH--SMFVPMVRLSCCIMCIIFFL---------FFFSISAFILFV 121 (149)
Q Consensus 55 e~L~~Lk~~Gi~-i~IaT~~~~~-~i~~~~l~~~gl~--~~f~~~~~~~p~p~~~i~~~---------~~~~~~~~l~~e 121 (149)
.+++.|++. +. ..++||..+. .+-+..++.+++. ++.-.. ...+. ...... ....|.-.++.+
T Consensus 27 p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l~~--~~~~~-~~~~~~~~~~l~~~l~~~kPD~Vlv~g 102 (385)
T 4hwg_A 27 CVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEV--AADNT-AKSIGLVIEKVDEVLEKEKPDAVLFYG 102 (385)
T ss_dssp HHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEECCC--CCCCS-HHHHHHHHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCCCCceecCC--CCCCH-HHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 567777766 55 4566777654 3223345778874 222111 12222 222221 336777778888
Q ss_pred eh--HhHHHHHHHhCCchhhh
Q 032013 122 DL--FCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 122 Ds--~~gi~aa~~ag~~~~~~ 140 (149)
|. .....||+..|++++.+
T Consensus 103 d~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 103 DTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp CSGGGGGHHHHHHTTCCEEEE
T ss_pred CchHHHHHHHHHHhCCCEEEE
Confidence 63 33378888889997654
No 352
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=29.14 E-value=1.8e+02 Score=21.86 Aligned_cols=34 Identities=12% Similarity=0.232 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 52 HAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 52 g~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
....+.+.|+++|+.+.++|+.. ....++..|+.
T Consensus 20 ~~~~La~~L~~~GheV~v~~~~~----~~~~~~~~G~~ 53 (402)
T 3ia7_A 20 PSLGLVSELARRGHRITYVTTPL----FADEVKAAGAE 53 (402)
T ss_dssp HHHHHHHHHHHTTCEEEEEECHH----HHHHHHHTTCE
T ss_pred cHHHHHHHHHhCCCEEEEEcCHH----HHHHHHHcCCE
Confidence 34578899999999999999742 24456666653
No 353
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=28.97 E-value=97 Score=23.57 Aligned_cols=58 Identities=24% Similarity=0.287 Sum_probs=43.1
Q ss_pred cEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 23 k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
+.++.=+-|+.+.. + .....+.+-+..|++.|++++|++|.. .. +...++.+++...|
T Consensus 26 k~iViKlGGs~l~~-----~-----~~~~~~~~~i~~l~~~G~~vViVhGgG-~~-i~~~~~~~~~~~~~ 83 (299)
T 2ap9_A 26 KVVVVKYGGNAMTD-----D-----TLRRAFAADMAFLRNCGIHPVVVHGGG-PQ-ITAMLRRLGIEGDF 83 (299)
T ss_dssp CEEEEEECTHHHHS-----H-----HHHHHHHHHHHHHHTTTCEEEEEECCS-HH-HHHHHHHHTCCCCC
T ss_pred CeEEEEECchhhCC-----c-----hHHHHHHHHHHHHHHCCCcEEEEECCc-HH-HHHHHHHcCCcccc
Confidence 56889999998862 1 123456677888889999999999964 44 57888888886544
No 354
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=28.95 E-value=34 Score=23.32 Aligned_cols=40 Identities=20% Similarity=0.134 Sum_probs=28.3
Q ss_pred cCccHHHHHHHHHHCCc------eEEEEeCCC--chHHHHHHHHHcCCC
Q 032013 49 LYPHAKGILEALKEKGI------HVAVASRSP--APDIAKTFLHKLGIH 89 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi------~i~IaT~~~--~~~i~~~~l~~~gl~ 89 (149)
..|...++.+.++++|+ .++-++-.. ... .+.+++..++.
T Consensus 77 ~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~-~~~~~~~~~~~ 124 (183)
T 3lwa_A 77 ESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDI-AQDFVTDNGLD 124 (183)
T ss_dssp HHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHH-HHHHHHHcCCC
Confidence 44566677788888888 887777554 455 68888888875
No 355
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=28.91 E-value=20 Score=23.06 Aligned_cols=40 Identities=23% Similarity=0.349 Sum_probs=22.3
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH----CCceEEEEeCCCchH
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE----KGIHVAVASRSPAPD 77 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~----~Gi~i~IaT~~~~~~ 77 (149)
.+.++++|++-. + ....++++++++ .+.+++++|+.....
T Consensus 46 ~~dlvi~D~~l~--~---------------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~ 89 (140)
T 3n53_A 46 HPDLVILDMDII--G---------------ENSPNLCLKLKRSKGLKNVPLILLFSSEHKE 89 (140)
T ss_dssp CCSEEEEETTC-----------------------CHHHHHHTSTTCTTCCEEEEECC----
T ss_pred CCCEEEEeCCCC--C---------------CcHHHHHHHHHcCcccCCCCEEEEecCCCHH
Confidence 378888887521 1 112356667766 468999999876443
No 356
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=28.89 E-value=1.7e+02 Score=22.20 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=24.1
Q ss_pred HHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 53 ~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
+..+.+.|+++|+.+.++|.. . ....+...|+.
T Consensus 18 ~~~la~~L~~~GheV~v~~~~---~-~~~~~~~~g~~ 50 (391)
T 3tsa_A 18 MVPLCWALQASGHEVLIAAPP---E-LQATAHGAGLT 50 (391)
T ss_dssp THHHHHHHHHTTCEEEEEECH---H-HHHHHHHBTCE
T ss_pred HHHHHHHHHHCCCEEEEecCh---h-hHHHHHhCCCc
Confidence 456889999999999999963 2 24456666654
No 357
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=28.61 E-value=14 Score=24.53 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=27.1
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.|...++.+.+++.++.++-++...... +...++..++.
T Consensus 43 ~~~l~~l~~~~~~~~v~vv~v~~d~~~~-~~~~~~~~~~~ 81 (151)
T 3raz_A 43 MPAMSKWYKAQKKGSVDMVGIALDTSDN-IGNFLKQTPVS 81 (151)
T ss_dssp HHHHHHHHHTSCTTTEEEEEEESSCHHH-HHHHHHHSCCS
T ss_pred HHHHHHHHHHhccCCeEEEEEECCChHH-HHHHHHHcCCC
Confidence 3444444455555688888888776677 68888888875
No 358
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=28.42 E-value=36 Score=24.92 Aligned_cols=26 Identities=8% Similarity=-0.023 Sum_probs=22.8
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSP 74 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~ 74 (149)
-.+.+.++++.++++|.+++.+|+..
T Consensus 120 ~t~~~i~~~~~Ak~~G~~vI~IT~~~ 145 (243)
T 3cvj_A 120 RNTVPVEMAIESRNIGAKVIAMTSMK 145 (243)
T ss_dssp CSHHHHHHHHHHHHHTCEEEEEECHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 34788899999999999999999874
No 359
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=28.37 E-value=38 Score=22.48 Aligned_cols=65 Identities=12% Similarity=0.168 Sum_probs=38.0
Q ss_pred ccEEEEecCCccccc------------cccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC--------CchHHHHH
Q 032013 22 PRLVVFDLDYTLWPF------------YCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS--------PAPDIAKT 81 (149)
Q Consensus 22 ~k~vifDlDGTLld~------------~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~i~~~ 81 (149)
|..-+.|.||.-++. +..|++.. ....|...++.+.++++|+.++.+|.. .... +..
T Consensus 13 p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C--~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~-~~~ 89 (170)
T 2p5q_A 13 HDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMT--NSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQ-ITD 89 (170)
T ss_dssp GGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTH--HHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHH-HHH
T ss_pred cceEEEcCCCCEecHHHhCCCEEEEEEEeccCCcc--HHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHH-HHH
Confidence 555677888854332 22222211 124455667777777788999888853 3345 466
Q ss_pred HHH-HcCCC
Q 032013 82 FLH-KLGIH 89 (149)
Q Consensus 82 ~l~-~~gl~ 89 (149)
.++ .+++.
T Consensus 90 ~~~~~~~~~ 98 (170)
T 2p5q_A 90 FVCTRFKSE 98 (170)
T ss_dssp HHHHHTCCC
T ss_pred HHHHhcCCC
Confidence 777 66664
No 360
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=28.34 E-value=1.2e+02 Score=22.74 Aligned_cols=76 Identities=9% Similarity=-0.047 Sum_probs=41.5
Q ss_pred HHHHHHHHHCCceEEEEeCC-CchHHHHHHHHHcCCCCCcccccccCCChhHHHHHHhh--CCCcceEEEeehHhHHHHH
Q 032013 54 KGILEALKEKGIHVAVASRS-PAPDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFF--FSISAFILFVDLFCFMYAA 130 (149)
Q Consensus 54 ~e~L~~Lk~~Gi~i~IaT~~-~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~--~~~~~~l~~eDs~~gi~aa 130 (149)
.++++.+++ +.++.++.|. +... .+...+.+++.. +.. .++. +....+|.... +.++ .++=+.-|
T Consensus 203 i~a~~~l~~-~~~~l~i~G~~~~~~-l~~~~~~~~~~~-v~~-~g~~-~~~~~~~~~ad~~v~~s-------g~~~~~EA 270 (364)
T 1f0k_A 203 PQVAAKLGD-SVTIWHQSGKGSQQS-VEQAYAEAGQPQ-HKV-TEFI-DDMAAAYAWADVVVCRS-------GALTVSEI 270 (364)
T ss_dssp HHHHHHHGG-GEEEEEECCTTCHHH-HHHHHHHTTCTT-SEE-ESCC-SCHHHHHHHCSEEEECC-------CHHHHHHH
T ss_pred HHHHHHhcC-CcEEEEEcCCchHHH-HHHHHhhcCCCc-eEE-ecch-hhHHHHHHhCCEEEECC-------chHHHHHH
Confidence 355666655 5675444444 3344 466667777643 211 1222 33445555422 2222 15557889
Q ss_pred HHhCCchhhhh
Q 032013 131 AYVGCDLYVYK 141 (149)
Q Consensus 131 ~~ag~~~~~~~ 141 (149)
.++|+++|+..
T Consensus 271 ma~G~Pvi~~~ 281 (364)
T 1f0k_A 271 AAAGLPALFVP 281 (364)
T ss_dssp HHHTCCEEECC
T ss_pred HHhCCCEEEee
Confidence 99999999864
No 361
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=28.32 E-value=53 Score=20.83 Aligned_cols=54 Identities=20% Similarity=0.344 Sum_probs=33.4
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~ 91 (149)
..+.++++|++-. + ....++++++++. +.+++++|+..... ........|..+|
T Consensus 58 ~~~dlii~D~~l~--~---------------~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~ 115 (143)
T 2qvg_A 58 IHPKLILLDINIP--K---------------MNGIEFLKELRDDSSFTDIEVFVLTAAYTSK-DKLAFESLNIRGH 115 (143)
T ss_dssp CCCSEEEEETTCT--T---------------SCHHHHHHHHTTSGGGTTCEEEEEESCCCHH-HHHHHTTTTCCEE
T ss_pred CCCCEEEEecCCC--C---------------CCHHHHHHHHHcCccccCCcEEEEeCCCCHH-HHHHHHhcCCCeE
Confidence 4478888887521 1 1234778888764 68899999887655 3444445565544
No 362
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=28.28 E-value=27 Score=25.03 Aligned_cols=40 Identities=8% Similarity=0.074 Sum_probs=29.1
Q ss_pred cCccHHHHHHHHHHCCceEEEEeC--------CCchHHHHHHHHHcCCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASR--------SPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~--------~~~~~i~~~~l~~~gl~ 89 (149)
..|...++.++++++|+.++.++. ..... .....+..++.
T Consensus 77 ~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~-~~~~~~~~~~~ 124 (218)
T 3u5r_E 77 IREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLER-VGAEVKAYGYG 124 (218)
T ss_dssp THHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHH-HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHH-HHHHHHHhCCC
Confidence 445666777778888899888886 44555 57888888874
No 363
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=28.10 E-value=1e+02 Score=18.59 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=23.8
Q ss_pred HHHHHHHHH-CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~-~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ ...+++++|+..... .....-..|..+|+
T Consensus 61 ~~~~~~l~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 99 (120)
T 2a9o_A 61 LEVAKTIRKTSSVPILMLSAKDSEF-DKVIGLELGADDYV 99 (120)
T ss_dssp HHHHHHHHHHCCCCEEEEESCCSHH-HHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCCEEEEecCCchH-HHHHHHhCCHhheE
Confidence 356666654 578999999887665 33444456765543
No 364
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=28.06 E-value=72 Score=24.65 Aligned_cols=29 Identities=14% Similarity=0.102 Sum_probs=25.7
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+||.+...
T Consensus 86 ~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~ 114 (329)
T 3eua_A 86 NTPETVKAAAFARGKGALTIAMTFKPESP 114 (329)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESCTTSH
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCh
Confidence 34788999999999999999999988766
No 365
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=28.02 E-value=95 Score=23.01 Aligned_cols=66 Identities=12% Similarity=0.017 Sum_probs=39.0
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
+..+.++.=+=|+.+.... ...-+......+.+.+..+++.|++++|++|+.... ....++.+++.
T Consensus 10 ~~~~~iViKiGGs~l~~~~---~~~~~~~~i~~~a~~I~~l~~~G~~vViV~GgG~~~-~~~~~~~~g~~ 75 (255)
T 2jjx_A 10 RPYKRVLIKLSGGALADQT---GNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIF-RGHLAEEWGID 75 (255)
T ss_dssp CBCSEEEEEECGGGTSCSS---SCSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTC-CHHHHHHTTCC
T ss_pred ccCCEEEEEECHHHhCCCC---CCCCCHHHHHHHHHHHHHHHHCCCeEEEEECchHHH-hhhHHHHcCCC
Confidence 4467899999999886210 000011233455566777778899999999883221 12225566654
No 366
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=28.02 E-value=52 Score=25.85 Aligned_cols=63 Identities=22% Similarity=0.401 Sum_probs=39.5
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCce----EEEEeCCC---chHHHHHHHHHcCCCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIH----VAVASRSP---APDIAKTFLHKLGIHS 90 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~----i~IaT~~~---~~~i~~~~l~~~gl~~ 90 (149)
.-|.+++||+|. +-+. ........|...++-+.+++.|+. |+|--+.. ..+ +.-.|+.+|..+
T Consensus 72 HIPGAv~~Dld~-~~d~------~~~~ph~LP~~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR-~wW~Lr~~Gh~~ 141 (327)
T 3utn_X 72 RIPNSIFFDIDA-ISDK------KSPYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRVGNFSSPR-CAWTLGVMGHPK 141 (327)
T ss_dssp BCTTCEECCTTT-SSCT------TSSSTTCCCCHHHHHHHHHHTTCCTTCEEEEECSSSSSSHHH-HHHHHHHTTCSE
T ss_pred cCCCCeeeChHH-hcCC------CCCCCCCCcCHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHH-HHHHHHHcCCCc
Confidence 347889999985 4442 222234678888888888887764 55543322 223 455678888764
No 367
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=27.89 E-value=88 Score=20.11 Aligned_cols=55 Identities=18% Similarity=0.104 Sum_probs=28.5
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
..+.++++|++- -+ ..| .++++.+++. +.+++++|+..... .....-..|..+|+
T Consensus 49 ~~~dlvi~d~~l--~~--------------~~g-~~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l 105 (154)
T 2qsj_A 49 NTVDLILLDVNL--PD--------------AEA-IDGLVRLKRFDPSNAVALISGETDHE-LIRAALEAGADGFI 105 (154)
T ss_dssp CCCSEEEECC----------------------C-HHHHHHHHHHCTTSEEEEC-----CH-HHHHHHHTTCCBBC
T ss_pred CCCCEEEEeCCC--CC--------------Cch-HHHHHHHHHhCCCCeEEEEeCCCCHH-HHHHHHHccCCEEE
Confidence 347888888752 11 012 3566666663 68999999877655 34444457766654
No 368
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=27.72 E-value=1.5e+02 Score=21.90 Aligned_cols=19 Identities=16% Similarity=-0.055 Sum_probs=13.5
Q ss_pred ehHhHHHHHHHhCCchhhh
Q 032013 122 DLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 122 Ds~~gi~aa~~ag~~~~~~ 140 (149)
|...-+..+++.|++++|=
T Consensus 142 e~~~~i~~l~~~G~~vVVG 160 (225)
T 2pju_A 142 DARGQINELKANGTEAVVG 160 (225)
T ss_dssp HHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEC
Confidence 6677777777777777663
No 369
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=27.61 E-value=84 Score=21.79 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=27.3
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC--CceEEEEeCCCchH
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPD 77 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~--Gi~i~IaT~~~~~~ 77 (149)
.|+++++|++-- + .+| .++++++++. +.+++++|+.....
T Consensus 46 ~~dlvllD~~l~--~--------------~~g-~~~~~~lr~~~~~~~ii~ls~~~~~~ 87 (225)
T 1kgs_A 46 PFDVVILDIMLP--V--------------HDG-WEILKSMRESGVNTPVLMLTALSDVE 87 (225)
T ss_dssp CCSEEEEESCCS--S--------------SCH-HHHHHHHHHTTCCCCEEEEESSCHHH
T ss_pred CCCEEEEeCCCC--C--------------CCH-HHHHHHHHhcCCCCCEEEEeCCCCHH
Confidence 478888887521 1 123 4778888775 68999999887544
No 370
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=27.54 E-value=1.8e+02 Score=26.14 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=30.9
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEe
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT 71 (149)
...+.+|+|-.=- ...+.-+. .-+|+..+++++|+++|.++++.-
T Consensus 321 ~Dvi~lDidy~~~--~~dFt~D~---~~FPdp~~mv~~Lh~~G~k~v~~i 365 (875)
T 3l4y_A 321 YDVQHADIDYMDE--RRDFTYDS---VDFKGFPEFVNELHNNGQKLVIIV 365 (875)
T ss_dssp CCEEEECGGGSBT--TBTTCCCT---TTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred CceEEEccchhcC--CCceeeCh---hhCCCHHHHHHHHHHCCCEEEEEe
Confidence 3778999985321 12221111 367889999999999999999853
No 371
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=27.37 E-value=58 Score=24.95 Aligned_cols=84 Identities=12% Similarity=0.089 Sum_probs=46.1
Q ss_pred ccHHHHHHHHHH----CCceEEEEeCCCch--HHHHHHHHHcCCCCCcccccccCCCh-hHHHHHH--hhCCCcceEEEe
Q 032013 51 PHAKGILEALKE----KGIHVAVASRSPAP--DIAKTFLHKLGIHSMFVPMVRLSCCI-MCIIFFL--FFFSISAFILFV 121 (149)
Q Consensus 51 pg~~e~L~~Lk~----~Gi~i~IaT~~~~~--~i~~~~l~~~gl~~~f~~~~~~~p~p-~~~i~~~--~~~~~~~~l~~e 121 (149)
+.+.++++.+++ .++++.++-+++.. ...+...+.++ +. ....+.-+.. ...+|.. ..+.|+. .|
T Consensus 268 ~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~--~~-~~~~g~~~~~~~~~~~~~adv~v~ps~---~e 341 (439)
T 3fro_A 268 DVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG--NV-KVITEMLSREFVRELYGSVDFVIIPSY---FE 341 (439)
T ss_dssp HHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT--TE-EEECSCCCHHHHHHHHTTCSEEEECBS---CC
T ss_pred HHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC--CE-EEEcCCCCHHHHHHHHHHCCEEEeCCC---CC
Confidence 445566777766 46888888766543 21355555555 11 1112322333 2233333 2233332 25
Q ss_pred ehHhHHHHHHHhCCchhhh
Q 032013 122 DLFCFMYAAAYVGCDLYVY 140 (149)
Q Consensus 122 Ds~~gi~aa~~ag~~~~~~ 140 (149)
=.+.-+.-|.++|+++|+.
T Consensus 342 ~~~~~~~EAma~G~Pvi~s 360 (439)
T 3fro_A 342 PFGLVALEAMCLGAIPIAS 360 (439)
T ss_dssp SSCHHHHHHHHTTCEEEEE
T ss_pred CccHHHHHHHHCCCCeEEc
Confidence 5677788899999998875
No 372
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=27.36 E-value=85 Score=23.21 Aligned_cols=49 Identities=6% Similarity=-0.109 Sum_probs=32.0
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS 73 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~ 73 (149)
.+.++.=+=|+.+.... ...-+......+.+-+..+++.|++++|++|+
T Consensus 7 ~k~iViKlGGs~l~~~~---~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGg 55 (252)
T 1z9d_A 7 YQRILIKLSGEALAGEK---GVGIDIPTVQAIAKEIAEVHVSGVQIALVIGG 55 (252)
T ss_dssp CSEEEEEECGGGGTCSS---SSSCCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CCEEEEEEchHHccCCC---CCCCCHHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence 46789999999986210 00001123345556677888899999999976
No 373
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=27.29 E-value=52 Score=25.51 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=40.4
Q ss_pred cEEEEecCCccccccccccccCCCC-----ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 23 RLVVFDLDYTLWPFYCECCYEDEIP-----YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 23 k~vifDlDGTLld~~~~~~~~~~~~-----~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
+.++.=+-|..+.. ++.... .....+.+-+..|++.|++++|++|+... +...++++++...|
T Consensus 5 ~~iVIKlGGs~l~~-----~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~--~~~~~~~~~~~~~~ 72 (316)
T 2e9y_A 5 RLAVIALGGNAIAG-----PGMDVSVESQTAAVKRASSIIADVLADGWRSVITHGNGPQ--VGYLSEAFEALPPE 72 (316)
T ss_dssp CEEEEECCHHHHSB-----TTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHH--HHHHHHHHHTSCTT
T ss_pred CEEEEEEChHHhcC-----CCCCcchhhHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHH--HhHHHHHcCCCCCC
Confidence 45677777776651 111000 23345667788888999999999887544 46778888876544
No 374
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=27.20 E-value=1.5e+02 Score=25.60 Aligned_cols=46 Identities=17% Similarity=0.406 Sum_probs=32.4
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASR 72 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~ 72 (149)
...+.+|+|-+ +.+..+.-+. .-+|+..+++++|+++|+++++.-.
T Consensus 206 ~dvi~lD~~y~--~~~~dft~d~---~~FPdp~~mv~~Lh~~G~k~~l~i~ 251 (693)
T 2g3m_A 206 VAGVFLDIHYM--DSYKLFTWHP---YRFPEPKKLIDELHKRNVKLITIVD 251 (693)
T ss_dssp EEEEEECGGGS--BTTBTTCCCT---TTCSCHHHHHHHHHHTTCEEEEEEC
T ss_pred cceEEEeccee--cCCccceECh---hhCCCHHHHHHHHHHCCCEEEEEec
Confidence 37789998764 3322222122 3578889999999999999998764
No 375
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=27.20 E-value=39 Score=24.44 Aligned_cols=91 Identities=12% Similarity=0.033 Sum_probs=62.9
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHH---HHHHcCCCCCcc------c-ccccCCChhHHHHHH--hhCCCc
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKT---FLHKLGIHSMFV------P-MVRLSCCIMCIIFFL--FFFSIS 115 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~---~l~~~gl~~~f~------~-~~~~~p~p~~~i~~~--~~~~~~ 115 (149)
..+|++.+.++.+ ++|+++ ++||..... ... .++..++..+|+ . ....||+|.+.-.+. .+++++
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~ 213 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINC-PSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKE 213 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEE-CCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGG
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccc-cCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCc
Confidence 4678999999999 789998 899876432 110 111111222222 1 335588886655554 668889
Q ss_pred ceEEEeehH-hHHHHHHHhCCchhhhh
Q 032013 116 AFILFVDLF-CFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 116 ~~l~~eDs~-~gi~aa~~ag~~~~~~~ 141 (149)
+|++|.|++ |++.+|++||+.++.+.
T Consensus 214 e~i~iGD~~~nDi~~a~~aG~~~i~v~ 240 (271)
T 1vjr_A 214 RMAMVGDRLYTDVKLGKNAGIVSILVL 240 (271)
T ss_dssp GEEEEESCHHHHHHHHHHHTCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 999999995 99999999999998764
No 376
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=27.19 E-value=66 Score=20.24 Aligned_cols=57 Identities=9% Similarity=0.145 Sum_probs=39.7
Q ss_pred ccEEEEecCCccc-cccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 22 PRLVVFDLDYTLW-PFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 22 ~k~vifDlDGTLl-d~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
++.+++|+.++=. | +. -..-..++.++++++|.++.++.-+ +. +...++..|+...|
T Consensus 42 ~~~vvlDls~v~~iD------ss-----gl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~ 99 (117)
T 1h4x_A 42 VTTIIWNFERLSFMD------SS-----GVGLVLGRMRELEAVAGRTILLNPS--PT-MRKVFQFSGLGPWM 99 (117)
T ss_dssp CSEEEEEEEEEEEEC------TH-----HHHHHHHHHHHHHTTTCEEEEESCC--HH-HHHHHHHTTCGGGE
T ss_pred CCEEEEECCCCcEec------hH-----HHHHHHHHHHHHHHcCCEEEEEeCC--HH-HHHHHHHhCCceEE
Confidence 5679999988744 3 11 1122346678888899998876543 45 58899999998876
No 377
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=27.15 E-value=99 Score=23.53 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=43.6
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
-+.++.=+-|+.+.. + .....+.+-+..|++.|++++|++|.. .. +...++.+++...|
T Consensus 36 ~k~iVIKlGGs~l~~-----~-----~~~~~~~~~i~~l~~~G~~vViVhGgG-~~-i~~~~~~~~~~~~~ 94 (298)
T 2rd5_A 36 GKTIVVKYGGAAMTS-----P-----ELKSSVVSDLVLLACVGLRPILVHGGG-PD-INRYLKQLNIPAEF 94 (298)
T ss_dssp TCEEEEEECTHHHHC-----H-----HHHHHHHHHHHHHHHTTCEEEEEECCH-HH-HHHHHHHTTCCCCE
T ss_pred CCEEEEEECchhhCC-----h-----hHHHHHHHHHHHHHHCCCCEEEEECCc-HH-HHHHHHHcCCCccc
Confidence 356899999998862 1 133456677888999999999999964 44 57888888876544
No 378
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=27.09 E-value=95 Score=21.97 Aligned_cols=38 Identities=8% Similarity=0.158 Sum_probs=24.2
Q ss_pred HHHHHHHHHC-CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~-Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++.+++. +.+++++|+..... .....-..|..+|+
T Consensus 65 ~~~~~~lr~~~~~~ii~lt~~~~~~-~~~~~~~~Ga~~~l 103 (238)
T 2gwr_A 65 IDVCRVLRADSGVPIVMLTAKTDTV-DVVLGLESGADDYI 103 (238)
T ss_dssp HHHHHHHHTTCCCCEEEEEETTCCS-CHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCHH-HHHHHHHCCCCEEE
Confidence 4677777764 78999999776544 23333456766554
No 379
>2eel_A Cell death activator CIDE-A; CIDE-N domain, cell death- inducing DFFA-like effector A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.97 E-value=61 Score=20.87 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=20.5
Q ss_pred cHHHhHHHHHhhhhccCCCccEEEEecCCccccc
Q 032013 3 DLEKVKNEALEIIGQFENLPRLVVFDLDYTLWPF 36 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~k~vifDlDGTLld~ 36 (149)
.|+++..++....... ..+-.++++-|||.++.
T Consensus 29 sL~EL~~K~~~~l~l~-~~~~~lvLeeDGT~Vdd 61 (91)
T 2eel_A 29 SLQELISKTLDALVIA-TGLVTLVLEEDGTVVDT 61 (91)
T ss_dssp SHHHHHHHHHHHTTCS-SSCEEEEETTTCCBCCC
T ss_pred CHHHHHHHHHHHhcCC-CCCcEEEEeeCCcEEec
Confidence 3566666664432221 22456889999999974
No 380
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=26.96 E-value=74 Score=21.56 Aligned_cols=84 Identities=12% Similarity=0.048 Sum_probs=44.1
Q ss_pred ccHHHHHHHHH--HC--CceEEEEeCCC--c-hHHHHHHHHHcCCCCCcccccccCCCh-hHHHHHH--hhCCCcceEEE
Q 032013 51 PHAKGILEALK--EK--GIHVAVASRSP--A-PDIAKTFLHKLGIHSMFVPMVRLSCCI-MCIIFFL--FFFSISAFILF 120 (149)
Q Consensus 51 pg~~e~L~~Lk--~~--Gi~i~IaT~~~--~-~~i~~~~l~~~gl~~~f~~~~~~~p~p-~~~i~~~--~~~~~~~~l~~ 120 (149)
+.+.++++.++ ++ ++++.++.+.+ . .. .+...+.++ .+....+.-+.. ...+|.. ..+.|+. .
T Consensus 53 ~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~-l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~---~ 125 (200)
T 2bfw_A 53 DVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGW-ARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSY---F 125 (200)
T ss_dssp HHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHH-HHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCS---C
T ss_pred HHHHHHHHHHHhhccCCCeEEEEECCCChHHHHH-HHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCC---C
Confidence 44556677774 32 57788777655 2 33 456666665 122112223322 2233322 2222221 1
Q ss_pred eehHhHHHHHHHhCCchhhhh
Q 032013 121 VDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 121 eDs~~gi~aa~~ag~~~~~~~ 141 (149)
|-.+.=+.-|.++|+++|+..
T Consensus 126 e~~~~~~~Ea~a~G~PvI~~~ 146 (200)
T 2bfw_A 126 EPFGLVALEAMCLGAIPIASA 146 (200)
T ss_dssp CSSCHHHHHHHHTTCEEEEES
T ss_pred CCccHHHHHHHHCCCCEEEeC
Confidence 444666788899999988764
No 381
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.54 E-value=1e+02 Score=20.77 Aligned_cols=38 Identities=11% Similarity=0.100 Sum_probs=25.9
Q ss_pred HHHHHHHHH--CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~--~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ .+.+++++|+..... .....-..|..+|+
T Consensus 67 ~~~~~~l~~~~~~~~ii~lt~~~~~~-~~~~a~~~Ga~~~l 106 (184)
T 3rqi_A 67 LSLIAPLCDLQPDARILVLTGYASIA-TAVQAVKDGADNYL 106 (184)
T ss_dssp HHHHHHHHHHCTTCEEEEEESSCCHH-HHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCHH-HHHHHHHhCHHHhe
Confidence 466777766 368999999988766 34444566766554
No 382
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=26.44 E-value=1.2e+02 Score=23.24 Aligned_cols=78 Identities=9% Similarity=0.028 Sum_probs=37.7
Q ss_pred ccHHHHHHHHHHC-CceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehHhHHHH
Q 032013 51 PHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLFCFMYA 129 (149)
Q Consensus 51 pg~~e~L~~Lk~~-Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~gi~a 129 (149)
+.+.++++.+++. |+.+.+-.+....+ ....++..|+..+.- ..-.++| .+|-... +. .-+|+-...+..
T Consensus 126 ~~~~~l~~~ik~~~~i~i~~s~g~~~~e-~l~~L~~aG~~~i~i--~lEt~~~--~~~~~i~--~~--~~~~~~l~~i~~ 196 (350)
T 3t7v_A 126 NRFVELVQIVKEELGLPIMISPGLMDNA-TLLKAREKGANFLAL--YQETYDT--ELYRKLR--VG--QSFDGRVNARRF 196 (350)
T ss_dssp HHHHHHHHHHHHHHCSCEEEECSSCCHH-HHHHHHHTTEEEEEC--CCBCSCH--HHHHHHS--TT--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCceEEEeCCCCCHH-HHHHHHHcCCCEEEE--eeecCCH--HHHHHhC--CC--CCHHHHHHHHHH
Confidence 3445555555543 44444322222333 244455555433221 1113334 4444432 21 246788888888
Q ss_pred HHHhCCch
Q 032013 130 AAYVGCDL 137 (149)
Q Consensus 130 a~~ag~~~ 137 (149)
++++|+++
T Consensus 197 a~~~Gi~v 204 (350)
T 3t7v_A 197 AKQQGYCV 204 (350)
T ss_dssp HHHHTCEE
T ss_pred HHHcCCeE
Confidence 88888873
No 383
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=26.24 E-value=57 Score=22.66 Aligned_cols=36 Identities=14% Similarity=0.049 Sum_probs=26.1
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK 85 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~ 85 (149)
..|...++.+.++++|+.++.+|..+... .....+.
T Consensus 52 ~~~~l~~l~~~~~~~~v~vv~Is~d~~~~-~~~~~~~ 87 (198)
T 1zof_A 52 EIIAFDKRVKDFHEKGFNVIGVSIDSEQV-HFAWKNT 87 (198)
T ss_dssp HHHHHHHTHHHHHHTTEEEEEEESSCHHH-HHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCEEEEEECCCHHH-HHHHHHh
Confidence 45566677777888899999998776555 4666665
No 384
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=26.20 E-value=1.3e+02 Score=19.21 Aligned_cols=39 Identities=15% Similarity=0.345 Sum_probs=25.8
Q ss_pred CccHHHHHHHHHHCCceEEEEe--CCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIHVAVAS--RSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT--~~~~~~i~~~~l~~~gl~ 89 (149)
.|...++.+.+++.|+.+..++ ..+... ....++..++.
T Consensus 47 ~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~-~~~~~~~~~~~ 87 (153)
T 2l5o_A 47 MPKIIKTANDYKNKNFQVLAVAQPIDPIES-VRQYVKDYGLP 87 (153)
T ss_dssp HHHHHHHHHHGGGTTEEEEEEECTTSCHHH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHhccCCeEEEEEecCCCCHHH-HHHHHHHcCCC
Confidence 3444555566666678888777 344555 57888888875
No 385
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=25.92 E-value=55 Score=23.07 Aligned_cols=24 Identities=17% Similarity=0.279 Sum_probs=20.8
Q ss_pred CccHHHHHHHHHHCCceEEEEeCC
Q 032013 50 YPHAKGILEALKEKGIHVAVASRS 73 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~ 73 (149)
.|...++++.+++.|+++..|+.+
T Consensus 101 v~~l~eli~~a~~~Gvk~~aC~~~ 124 (160)
T 3pnx_A 101 APKLSDLLSGARKKEVKFYACQLS 124 (160)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEehhh
Confidence 466789999999999999998864
No 386
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=25.80 E-value=81 Score=24.86 Aligned_cols=29 Identities=14% Similarity=-0.003 Sum_probs=25.4
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+||.+...
T Consensus 119 ~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~ 147 (375)
T 2zj3_A 119 ETADTLMGLRYCKERGALTVGITNTVGSS 147 (375)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESCTTCH
T ss_pred CCHHHHHHHHHHHHcCCcEEEEECCCCCh
Confidence 34788999999999999999999987665
No 387
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=25.61 E-value=57 Score=24.85 Aligned_cols=26 Identities=12% Similarity=-0.041 Sum_probs=23.5
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSP 74 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~ 74 (149)
-.+++.++++.++++|.+++.+||..
T Consensus 91 ~T~e~~~a~~~ak~~g~~~iaIT~~~ 116 (302)
T 1tzb_A 91 NTIETLYTVEYAKRRRIPAVAITTGG 116 (302)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESST
T ss_pred CCHHHHHHHHHHHHCCCeEEEECCCc
Confidence 34788999999999999999999987
No 388
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=25.47 E-value=78 Score=24.56 Aligned_cols=29 Identities=7% Similarity=-0.088 Sum_probs=25.2
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+++.++++.++++|.+++.+||.+...
T Consensus 112 ~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~ 140 (342)
T 1j5x_A 112 NTTEVLLANDVLKKRNHRTIGITIEEESR 140 (342)
T ss_dssp CCHHHHHHHHHHHHTTEEEEEEESCTTSH
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCH
Confidence 34788999999999999999999987665
No 389
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=25.42 E-value=78 Score=24.83 Aligned_cols=29 Identities=14% Similarity=-0.032 Sum_probs=25.3
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+||.+...
T Consensus 109 ~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~ 137 (367)
T 2poc_A 109 ETADSILALQYCLERGALTVGIVNSVGSS 137 (367)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESSTTSH
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCh
Confidence 34788999999999999999999987665
No 390
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=25.29 E-value=1.6e+02 Score=21.26 Aligned_cols=54 Identities=11% Similarity=0.125 Sum_probs=33.5
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH--CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~--~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.+++++.|++---. .| .++++++++ ...+++++|+..... ........|..+|+
T Consensus 173 ~~dlvl~D~~mp~~----------------~G-~~l~~~ir~~~~~~piI~lt~~~~~~-~~~~~~~~G~~~~l 228 (254)
T 2ayx_A 173 HIDIVLSDVNMPNM----------------DG-YRLTQRIRQLGLTLPVIGVTANALAE-EKQRCLESGMDSCL 228 (254)
T ss_dssp CCSEEEEEESSCSS----------------CC-HHHHHHHHHHHCCSCEEEEESSTTSH-HHHHHHHCCCEEEE
T ss_pred CCCEEEEcCCCCCC----------------CH-HHHHHHHHhcCCCCcEEEEECCCCHH-HHHHHHHcCCceEE
Confidence 37888888752111 22 255566654 368999999887665 35555567765543
No 391
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=25.23 E-value=1.2e+02 Score=18.38 Aligned_cols=38 Identities=11% Similarity=0.141 Sum_probs=24.2
Q ss_pred HHHHHHHHH-CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~-~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++.+++ ...+++++|+..... .....-..|..+|+
T Consensus 62 ~~~~~~l~~~~~~~ii~~s~~~~~~-~~~~~~~~ga~~~l 100 (122)
T 1zgz_A 62 LMLTRALRERSTVGIILVTGRSDRI-DRIVGLEMGADDYV 100 (122)
T ss_dssp HHHHHHHHTTCCCEEEEEESSCCHH-HHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCCEEEEECCCChh-hHHHHHHhCHHHHc
Confidence 467777765 468899999887665 33334456765543
No 392
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=25.13 E-value=1.2e+02 Score=22.16 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=26.3
Q ss_pred cHHHHHHHHHHCCc---eEEEEeCCCchHHHHHHHHHcCCCCC
Q 032013 52 HAKGILEALKEKGI---HVAVASRSPAPDIAKTFLHKLGIHSM 91 (149)
Q Consensus 52 g~~e~L~~Lk~~Gi---~i~IaT~~~~~~i~~~~l~~~gl~~~ 91 (149)
.+..+|+.+++.++ -++|+|+++... .....++.|++-+
T Consensus 14 ~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~-~~~~A~~~gIp~~ 55 (216)
T 2ywr_A 14 NLQAIIDAIESGKVNASIELVISDNPKAY-AIERCKKHNVECK 55 (216)
T ss_dssp HHHHHHHHHHTTSSCEEEEEEEESCTTCH-HHHHHHHHTCCEE
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCChH-HHHHHHHcCCCEE
Confidence 34567777777665 346778877666 5677777887643
No 393
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=25.00 E-value=94 Score=20.49 Aligned_cols=38 Identities=21% Similarity=0.146 Sum_probs=27.4
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
.|...++.++++++| .+..+|..+... .....+..++.
T Consensus 55 ~~~l~~~~~~~~~~~-~vv~is~d~~~~-~~~~~~~~~~~ 92 (159)
T 2a4v_A 55 ASGFRDNYQELKEYA-AVFGLSADSVTS-QKKFQSKQNLP 92 (159)
T ss_dssp HHHHHHHHHHHTTTC-EEEEEESCCHHH-HHHHHHHHTCS
T ss_pred HHHHHHHHHHHHhCC-cEEEEeCCCHHH-HHHHHHHhCCC
Confidence 345556667777788 888788776666 58888888874
No 394
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=25.00 E-value=59 Score=20.45 Aligned_cols=38 Identities=16% Similarity=0.054 Sum_probs=24.3
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 68 ~~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l 107 (140)
T 2qr3_A 68 LFWLHEIKRQYRDLPVVLFTAYADID-LAVRGIKEGASDFV 107 (140)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEGGGHH-HHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhCcCCCEEEEECCCCHH-HHHHHHHcCchhee
Confidence 4667777663 68899999876655 34444456765543
No 395
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=25.00 E-value=78 Score=24.70 Aligned_cols=29 Identities=10% Similarity=0.111 Sum_probs=25.6
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+++.++++.++++|.+++.+||.+...
T Consensus 103 ~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~ 131 (344)
T 3fj1_A 103 KSPDIVAMTRNAGRDGALCVALTNDAASP 131 (344)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESCTTSH
T ss_pred CCHHHHHHHHHHHHCCCcEEEEECCCCCh
Confidence 34788999999999999999999987666
No 396
>1jei_A Emerin; membrane protein; NMR {Synthetic} SCOP: a.140.1.1 PDB: 2odc_I 2odg_C
Probab=24.78 E-value=25 Score=20.42 Aligned_cols=32 Identities=9% Similarity=-0.007 Sum_probs=27.1
Q ss_pred HHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 54 ~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
.++.++|.+.|++.+-+|++.+.- .+..|.++
T Consensus 9 ~eLr~~L~~~G~~~GPIt~sTRkl-YeKKL~~l 40 (53)
T 1jei_A 9 TELTTLLRRYNIPHGPVVGSTRRL-YEKKIFEY 40 (53)
T ss_dssp HHHHHHHSSSCCSCCCCCSGGGHH-HHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCCCcccHHH-HHHHHHHH
Confidence 578899999999999999999887 67777664
No 397
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=24.74 E-value=1.1e+02 Score=18.46 Aligned_cols=38 Identities=16% Similarity=0.206 Sum_probs=24.3
Q ss_pred HHHHHHHHH-CCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~-~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++ ...+++++|+..... .....-..|..+|+
T Consensus 61 ~~~~~~l~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 99 (121)
T 1zh2_A 61 IEFIRDLRQWSAVPVIVLSARSEES-DKIAALDAGADDYL 99 (121)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCSHH-HHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCcEEEEECCCCHH-HHHHHHhcCCCeEE
Confidence 467777764 368899999887665 33444456765543
No 398
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=24.66 E-value=77 Score=19.80 Aligned_cols=38 Identities=11% Similarity=0.138 Sum_probs=24.0
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l 102 (136)
T 1mvo_A 63 IEVCKQLRQQKLMFPILMLTAKDEEF-DKVLGLELGADDYM 102 (136)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTTCCC-CHHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHhCCCCEEE
Confidence 4677888775 57899998776544 23333456765543
No 399
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=24.58 E-value=1.5e+02 Score=22.23 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=26.2
Q ss_pred HHHHHHHHHC----CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~----Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 79 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~-~~~~a~~~Ga~~~l 120 (358)
T 3bre_A 79 LTLLAAYRGNPATRDIPIIVLSTKEEPT-VKSAAFAAGANDYL 120 (358)
T ss_dssp HHHHHHHTTSTTTTTSCEEEEESSCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHhcCcccCCCcEEEEeCCCCHH-HHHHHHhcChheEe
Confidence 4788888863 58999999887665 33334456766554
No 400
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=24.45 E-value=1.5e+02 Score=21.06 Aligned_cols=66 Identities=12% Similarity=0.067 Sum_probs=39.4
Q ss_pred CCccEEEEecC-Cccccc------------cccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC--------CchHH
Q 032013 20 NLPRLVVFDLD-YTLWPF------------YCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS--------PAPDI 78 (149)
Q Consensus 20 ~~~k~vifDlD-GTLld~------------~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~i 78 (149)
..|..-+.|+| |.-++. |-.|++. ..-+|...++.++++++|+.+.-+|.. +...
T Consensus 16 ~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~---c~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~- 91 (207)
T 2r37_A 16 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGL---TGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSE- 91 (207)
T ss_dssp CGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTT---TTHHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHH-
T ss_pred ccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCC---hHHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHH-
Confidence 34666778898 764432 2122222 123566667777888889888888733 1245
Q ss_pred HHHHHH------HcCCC
Q 032013 79 AKTFLH------KLGIH 89 (149)
Q Consensus 79 ~~~~l~------~~gl~ 89 (149)
+..+++ ..++.
T Consensus 92 i~~f~~~~~~~~~~~~~ 108 (207)
T 2r37_A 92 ILPTLKYVRPGGGFVPN 108 (207)
T ss_dssp HHHHHHHTSSCTTCCCS
T ss_pred HHHHHHhcchhhccCcc
Confidence 467777 66664
No 401
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=24.35 E-value=1.3e+02 Score=21.84 Aligned_cols=61 Identities=8% Similarity=-0.012 Sum_probs=38.0
Q ss_pred ccEEEEecCCccccccccccccC--CCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHH-HHHcCCC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYED--EIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTF-LHKLGIH 89 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~--~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~-l~~~gl~ 89 (149)
.+.++.=+-|+.+.. +.+ .+......+.+-+..+++.|++++|++|+.. . +... ++.+++.
T Consensus 7 ~~~iViK~GGs~l~~-----~~~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG~-~-~~g~~~~~~~~~ 70 (239)
T 1ybd_A 7 YKRVLLKLSGESLMG-----SDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGN-I-FRGVSAQAGSMD 70 (239)
T ss_dssp CSEEEEEECGGGGGT-----TSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHH-H-HHHHHHHHTTSC
T ss_pred CCEEEEEEchHHhCC-----CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCcH-H-HhchhHHHcCCC
Confidence 467899999998862 111 0112334556677888889999999998632 2 2333 4566654
No 402
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=24.14 E-value=81 Score=21.62 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=23.9
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. +.+++++|+..... .....-..|..+|+
T Consensus 64 ~~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~a~~~Ga~~~l 103 (208)
T 1yio_A 64 IELQEQLTAISDGIPIVFITAHGDIP-MTVRAMKAGAIEFL 103 (208)
T ss_dssp HHHHHHHHHTTCCCCEEEEESCTTSC-CCHHHHHTTEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCHH-HHHHHHHCCCcEEE
Confidence 4778888775 68999999876543 22223345655443
No 403
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=24.03 E-value=23 Score=23.36 Aligned_cols=39 Identities=26% Similarity=0.313 Sum_probs=26.7
Q ss_pred CccHHHHHHHHHHCCceEEEEeC-------CCchHHHHHHHHHcCCC
Q 032013 50 YPHAKGILEALKEKGIHVAVASR-------SPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~-------~~~~~i~~~~l~~~gl~ 89 (149)
.|...++.+++++.|+.++-++. .+... +...++..++.
T Consensus 48 ~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 93 (158)
T 3eyt_A 48 IPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPIS-LKAFLHEYRIK 93 (158)
T ss_dssp HHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHH-HHHHHHHTTCC
T ss_pred hHHHHHHHHHhCcCCEEEEEEEecccccccCCHHH-HHHHHHHcCCC
Confidence 45555555666556888887773 35566 68888888876
No 404
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=23.98 E-value=94 Score=21.59 Aligned_cols=38 Identities=24% Similarity=0.384 Sum_probs=25.5
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..... .....-..|..+|+
T Consensus 56 ~~~~~~lr~~~~~~~ii~lt~~~~~~-~~~~~~~~Ga~~~l 95 (223)
T 2hqr_A 56 LSFVSRIKEKHSSIVVLVSSDNPTSE-EEVHAFEQGADDYI 95 (223)
T ss_dssp HHHHHHHHHHCTTSEEEEEESSCCHH-HHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCCHH-HHHHHHHcCCCEEE
Confidence 4677777664 78999999887665 34444456766554
No 405
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=23.84 E-value=49 Score=23.04 Aligned_cols=36 Identities=11% Similarity=0.027 Sum_probs=25.3
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
.|...++.++++++|+.++.+|..+... ....++..
T Consensus 54 ~~~l~~l~~~~~~~~v~vv~Is~d~~~~-~~~~~~~~ 89 (197)
T 1qmv_A 54 IIAFSNRAEDFRKLGCEVLGVSVDSQFT-HLAWINTP 89 (197)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHH-HHHHHTSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHH-HHHHHHHH
Confidence 3455566677777899999999877666 56666654
No 406
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=23.78 E-value=2.3e+02 Score=25.57 Aligned_cols=46 Identities=15% Similarity=0.207 Sum_probs=31.7
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeC
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASR 72 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~ 72 (149)
...+.+|+|-.= ....|.-+. .-+|+..+++++|+++|.++++.-.
T Consensus 349 ~Dvi~lDidy~~--~~~dFt~D~---~~FPdp~~mv~~Lh~~G~k~vl~id 394 (898)
T 3lpp_A 349 FDTQVTDIDYME--DKKDFTYDQ---VAFNGLPQFVQDLHDHGQKYVIILD 394 (898)
T ss_dssp CCEEEECGGGSS--TTCTTCCCT---TTTTTHHHHHHHHHHTTCEEEEEEC
T ss_pred ceeeEecccccc--CCCcceECh---hhCCCHHHHHHHHHHCCCEEEEEeC
Confidence 377899988431 122221121 3678999999999999999998753
No 407
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=23.75 E-value=55 Score=22.60 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=26.9
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
..|...++.++++++|+.++.+|..+... .....+..
T Consensus 50 ~~~~l~~~~~~~~~~~v~vv~Is~d~~~~-~~~~~~~~ 86 (192)
T 2h01_A 50 EIIALDKALDSFKERNVELLGCSVDSKFT-HLAWKKTP 86 (192)
T ss_dssp HHHHHHHTHHHHHHTTEEEEEEESSCHHH-HHHHHTSC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEeCCHHH-HHHHHHhH
Confidence 45566677778888899999999776665 46666655
No 408
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=23.58 E-value=91 Score=24.29 Aligned_cols=29 Identities=21% Similarity=0.216 Sum_probs=24.9
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+||.+...
T Consensus 114 ~t~e~~~a~~~ak~~Ga~vi~IT~~~~S~ 142 (355)
T 2a3n_A 114 DTKESVAIAEWCKAQGIRVVAITKNADSP 142 (355)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESCTTSH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEECCCCCh
Confidence 34788999999999999999999987555
No 409
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=23.40 E-value=2.5e+02 Score=21.41 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=23.3
Q ss_pred HHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCC
Q 032013 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGI 88 (149)
Q Consensus 53 ~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl 88 (149)
...+.+.|+++|+.+.++|+... ...++..|+
T Consensus 37 ~l~La~~L~~~Gh~V~v~~~~~~----~~~~~~~G~ 68 (415)
T 3rsc_A 37 TLTVVTELVRRGHRVSYVTAGGF----AEPVRAAGA 68 (415)
T ss_dssp GHHHHHHHHHTTCEEEEEECGGG----HHHHHHTTC
T ss_pred HHHHHHHHHHCCCEEEEEeCHHH----HHHHHhcCC
Confidence 45788899999999999996542 334556665
No 410
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=23.18 E-value=70 Score=21.45 Aligned_cols=37 Identities=19% Similarity=0.093 Sum_probs=24.5
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE 62 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~ 62 (149)
.|..+++|=||++...+.. ......+...++++.|++
T Consensus 129 ~p~~~liD~~G~i~~~~~~-----~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 129 ARAVFVLDADNKVVYKEIV-----SEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CCEEEEECTTCBEEEEEEC-----SBTTSCCCHHHHHHHHHT
T ss_pred eeEEEEECCCCeEEEEEEc-----CCcccCCCHHHHHHHHhc
Confidence 4778999999999863211 112334677788887764
No 411
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=23.16 E-value=66 Score=25.23 Aligned_cols=29 Identities=10% Similarity=0.060 Sum_probs=25.3
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+++.++++.++++|.+++.+||.+...
T Consensus 94 ~T~e~l~a~~~ak~~ga~~iaIT~~~~S~ 122 (352)
T 3g68_A 94 SSYSTYNAMKLAEDKGCKIASMAGCKNAL 122 (352)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESSTTCG
T ss_pred CCHHHHHHHHHHHHCCCCEEEEeCCCCCh
Confidence 34788999999999999999999987665
No 412
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=23.12 E-value=58 Score=20.76 Aligned_cols=40 Identities=15% Similarity=0.041 Sum_probs=25.0
Q ss_pred cCccHHHHHHHH-HHCCceEEEEeCC-CchHHHHHHHHHcCCC
Q 032013 49 LYPHAKGILEAL-KEKGIHVAVASRS-PAPDIAKTFLHKLGIH 89 (149)
Q Consensus 49 ~~pg~~e~L~~L-k~~Gi~i~IaT~~-~~~~i~~~~l~~~gl~ 89 (149)
..|...++.+.+ +++|+.++-++-. .... ....++..++.
T Consensus 51 ~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~-~~~~~~~~~~~ 92 (148)
T 3fkf_A 51 ANAELKRLNKEYKKNKNFAMLGISLDIDREA-WETAIKKDTLS 92 (148)
T ss_dssp HHHHHHHHHHHTTTCTTEEEEEEECCSCHHH-HHHHHHHTTCC
T ss_pred HhHHHHHHHHHhcCCCCeEEEEEECCCCHHH-HHHHHHHcCCC
Confidence 334445555555 5556888777744 4445 57888888874
No 413
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=23.03 E-value=53 Score=26.58 Aligned_cols=44 Identities=14% Similarity=0.264 Sum_probs=34.8
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
-+..++.++=+.|++.|.++.+..+.+... +..++++.++...+
T Consensus 49 fl~~sL~~l~~~L~~~g~~l~~~~g~~~~~-l~~l~~~~~~~~v~ 92 (420)
T 2j07_A 49 WFLENVRALREAYRARGGALWVLEGLPWEK-VPEAARRLKAKAVY 92 (420)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHcCCCEEE
Confidence 355666777788999999999999988777 68888888876533
No 414
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=23.00 E-value=1.6e+02 Score=19.09 Aligned_cols=57 Identities=12% Similarity=0.095 Sum_probs=38.2
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
...+.+++|+-|+=+- ++ ..........+.++..|.++.++.=+ +. +...+..+|+.
T Consensus 41 ~~~~~vIlDlsgV~~i-----Ds-----~g~~~L~~~~~~~~l~G~~~~l~Gi~--p~-va~~l~~~G~~ 97 (123)
T 3zxn_A 41 VAGKGLVIDISALEVV-----DE-----FVTRVLIEISRLAELLGLPFVLTGIK--PA-VAITLTEMGLD 97 (123)
T ss_dssp SCCSEEEEECTTCSSC-----CH-----HHHHHHHHHHHHHHHHTCCEEEECCC--HH-HHHHHHHTTCC
T ss_pred cCCCEEEEEcCCCCcc-----cH-----HHHHHHHHHHHHHHHCCCEEEEEcCC--HH-HHHHHHHhCCC
Confidence 3478899999998543 11 12223446778888889888765544 34 57788888875
No 415
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=22.85 E-value=61 Score=20.94 Aligned_cols=40 Identities=23% Similarity=0.361 Sum_probs=27.6
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCC-CchHHHHHHHHHcCCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRS-PAPDIAKTFLHKLGIH 89 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~-~~~~i~~~~l~~~gl~ 89 (149)
..|...++.+.++++|+.++.++.. .... ....++..++.
T Consensus 46 ~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~-~~~~~~~~~~~ 86 (152)
T 3gl3_A 46 SFPWMNQMQAKYKAKGFQVVAVNLDAKTGD-AMKFLAQVPAE 86 (152)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEECCSSHHH-HHHHHHHSCCC
T ss_pred HHHHHHHHHHHhhcCCeEEEEEECCCCHHH-HHHHHHHcCCC
Confidence 3455666777777788888888755 4445 57788887764
No 416
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=22.83 E-value=74 Score=24.90 Aligned_cols=29 Identities=14% Similarity=0.069 Sum_probs=25.6
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+||.+...
T Consensus 101 ~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~ 129 (347)
T 3fkj_A 101 NTAETVAAARVAREKGAATIGLVYQPDTP 129 (347)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEEESSTTCH
T ss_pred CcHHHHHHHHHHHHCCCcEEEEeCCCCCh
Confidence 34788999999999999999999987766
No 417
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=22.61 E-value=50 Score=21.10 Aligned_cols=17 Identities=24% Similarity=0.386 Sum_probs=13.8
Q ss_pred CCCccEEEEecCCcccc
Q 032013 19 ENLPRLVVFDLDYTLWP 35 (149)
Q Consensus 19 ~~~~k~vifDlDGTLld 35 (149)
...|.++++|-||.+..
T Consensus 90 ~~~Pt~~~~d~~G~~~~ 106 (133)
T 3fk8_A 90 DGIPAVVVVNSDGKVRY 106 (133)
T ss_dssp GCSSEEEEECTTSCEEE
T ss_pred CccceEEEECCCCCEEE
Confidence 34588899999999885
No 418
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=22.61 E-value=73 Score=25.39 Aligned_cols=62 Identities=8% Similarity=-0.086 Sum_probs=38.1
Q ss_pred chHHHHHHHHHcCCCCCcccccccCC-ChhHHHHHHh----h--CCCcceEEEeehHhHHHHHHHhCCchhhhh
Q 032013 75 APDIAKTFLHKLGIHSMFVPMVRLSC-CIMCIIFFLF----F--FSISAFILFVDLFCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 75 ~~~i~~~~l~~~gl~~~f~~~~~~~p-~p~~~i~~~~----~--~~~~~~l~~eDs~~gi~aa~~ag~~~~~~~ 141 (149)
... .+...+.+|+.+.+.. .+.-| +-...+|... . +.|+. .|-.+.=+.-|.++|+++|+..
T Consensus 321 ~~~-l~~~~~~~~l~~~V~~-~G~v~~~~~~~~~~~a~~~~dv~v~pS~---~Eg~~~~~lEAma~G~PvI~s~ 389 (499)
T 2r60_A 321 LGK-IIELIDNNDCRGKVSM-FPLNSQQELAGCYAYLASKGSVFALTSF---YEPFGLAPVEAMASGLPAVVTR 389 (499)
T ss_dssp HHH-HHHHHHHTTCBTTEEE-EECCSHHHHHHHHHHHHHTTCEEEECCS---CBCCCSHHHHHHHTTCCEEEES
T ss_pred HHH-HHHHHHhcCCCceEEE-CCCCCHHHHHHHHHhcCcCCCEEEECcc---cCCCCcHHHHHHHcCCCEEEec
Confidence 445 5777888888764433 23333 3344556555 3 23332 3556677888999999998764
No 419
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=22.60 E-value=1.2e+02 Score=20.88 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=27.6
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHc
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~ 86 (149)
.|...++.++++++|+.++.+|..+... ...+++..
T Consensus 50 ~~~l~~~~~~~~~~~v~vv~Is~d~~~~-~~~~~~~~ 85 (186)
T 1n8j_A 50 LGDVADHYEELQKLGVDVYSVSTDTHFT-HKAWHSSS 85 (186)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEESSCHHH-HHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHH-HHHHHHHc
Confidence 4556677777788899999999777666 57778877
No 420
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=22.57 E-value=29 Score=23.07 Aligned_cols=24 Identities=13% Similarity=0.166 Sum_probs=19.4
Q ss_pred HHHHHHHHHCCceEEEEeCCCchH
Q 032013 54 KGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 54 ~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
.+++++++++++|++++|+.....
T Consensus 69 ~el~~~lr~~~ipvI~lTa~~~~~ 92 (123)
T 2lpm_A 69 YPVADILAERNVPFIFATGYGSKG 92 (123)
T ss_dssp HHHHHHHHHTCCSSCCBCTTCTTS
T ss_pred HHHHHHHHcCCCCEEEEecCccHH
Confidence 368889999999999999876443
No 421
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=22.47 E-value=1.7e+02 Score=19.25 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=30.6
Q ss_pred cHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCC
Q 032013 52 HAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 52 g~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~ 90 (149)
+..++++.|++.|+.++=+++..... .+......|+.-
T Consensus 62 dl~~L~~~l~~~gl~~vGV~g~~~~~-~~~~a~~~GLp~ 99 (120)
T 3ghf_A 62 NWPELHKIVTSTGLRIIGVSGCKDAS-LKVEIDRMGLPL 99 (120)
T ss_dssp CHHHHHHHHHTTTCEEEEEESCCCHH-HHHHHHHHTCCE
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCcHH-HHHHHHHCCCCc
Confidence 56788899999999998888877665 477778888863
No 422
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=22.39 E-value=2e+02 Score=20.04 Aligned_cols=44 Identities=7% Similarity=-0.094 Sum_probs=28.6
Q ss_pred cCCCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHHC
Q 032013 18 FENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK 63 (149)
Q Consensus 18 ~~~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~ 63 (149)
....|..+++|=||..+....++.+.+ ..-.|+..++|+.+++.
T Consensus 102 v~g~Pt~v~l~~dG~~v~~~ty~p~~~--~~~~~~f~~~L~~v~~~ 145 (173)
T 3ira_A 102 RGGWPLNIIMTPGKKPFFAGTYIPKNT--RFNQIGMLELVPRIKEI 145 (173)
T ss_dssp CCCSSEEEEECTTSCEEEEESSCCSSC--BTTBCCHHHHHHHHHHH
T ss_pred CCCCcceeeECCCCCceeeeeeCCCCc--CCCCCCHHHHHHHHHHH
Confidence 345588999999999886422222211 12446888888888764
No 423
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=22.06 E-value=81 Score=24.23 Aligned_cols=62 Identities=13% Similarity=0.060 Sum_probs=39.7
Q ss_pred cEEEEecCCccccccccccccCCCC----ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 23 RLVVFDLDYTLWPFYCECCYEDEIP----YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 23 k~vifDlDGTLld~~~~~~~~~~~~----~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
+.++.=+-|..+.. +.... .....+.+-+..|++.|++++|++|+.. . +...++++++...|
T Consensus 3 k~iVIKlGGs~l~~------~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~-~-~~~~l~~~~~~~~~ 68 (310)
T 2we5_A 3 KKMVVALGGNAILS------NDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGP-Q-VGNLLLQQQAADSE 68 (310)
T ss_dssp CEEEEECCGGGGCC------SSCSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHH-H-HHHHHHHHHHTCSS
T ss_pred cEEEEEEChHHhcC------CCCChHHHHHHHHHHHHHHHHHHHCCCeEEEEECCcH-H-HhHHHHHcCCCCCC
Confidence 45777777877752 10000 2334556778888899999999997754 3 57777777765444
No 424
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=22.06 E-value=1.5e+02 Score=20.46 Aligned_cols=36 Identities=28% Similarity=0.418 Sum_probs=29.8
Q ss_pred HHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 53 ~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
+.+.++.+.+.|..++++..+-.+. +..+|.+.|+.
T Consensus 61 l~~~v~kI~~~g~nVVl~~k~I~d~-a~~~l~k~gI~ 96 (159)
T 1ass_A 61 FKQMVEKIKKSGANVVLCQKGIDDV-AQHYLAKEGIY 96 (159)
T ss_dssp HHHHHHHHHHTTCSEEEESSCBCHH-HHHHHHHTTCE
T ss_pred HHHHhhhhhhCCCeEEEECCccCHH-HHHHHHHCCCE
Confidence 4577888999999999888887777 89999998874
No 425
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=22.02 E-value=2.3e+02 Score=21.69 Aligned_cols=82 Identities=6% Similarity=0.029 Sum_probs=43.1
Q ss_pred CccHHHHHHHHHHCCceEEEEeCCCch-HHHHHHHHHcCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehHhHHH
Q 032013 50 YPHAKGILEALKEKGIHVAVASRSPAP-DIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLFCFMY 128 (149)
Q Consensus 50 ~pg~~e~L~~Lk~~Gi~i~IaT~~~~~-~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~gi~ 128 (149)
.+...+++++|.++|+++++ ++++.+ ..++.+.+..+- ...+ -..+.+. .. +...+.-...++--||-.--.
T Consensus 203 ~~~~~~l~~~l~~~g~~vvl-~g~~~e~~~~~~i~~~~~~-~~~~--l~g~~sl-~e--~~ali~~a~~~i~~DsG~~Hl 275 (349)
T 3tov_A 203 AERFAHVADYFGRLGYKTVF-FGGPMDLEMVQPVVEQMET-KPIV--ATGKFQL-GP--LAAAMNRCNLLITNDSGPMHV 275 (349)
T ss_dssp HHHHHHHHHHHHHHTCEEEE-CCCTTTHHHHHHHHHTCSS-CCEE--CTTCCCH-HH--HHHHHHTCSEEEEESSHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEE-EeCcchHHHHHHHHHhccc-ccEE--eeCCCCH-HH--HHHHHHhCCEEEECCCCHHHH
Confidence 34677889999888998877 555433 223444444431 1111 0112222 12 122222234566668776666
Q ss_pred HHHHhCCchhh
Q 032013 129 AAAYVGCDLYV 139 (149)
Q Consensus 129 aa~~ag~~~~~ 139 (149)
|.+.|.++++
T Consensus 276 -Aaa~g~P~v~ 285 (349)
T 3tov_A 276 -GISQGVPIVA 285 (349)
T ss_dssp -HHTTTCCEEE
T ss_pred -HHhcCCCEEE
Confidence 4457888775
No 426
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=21.94 E-value=56 Score=26.81 Aligned_cols=44 Identities=11% Similarity=0.219 Sum_probs=33.7
Q ss_pred ccCccHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 48 ~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
-+..++.++=+.|++.|+++.+.++.+... +..++++.++...+
T Consensus 89 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~-l~~l~~~~~~~~V~ 132 (482)
T 2xry_A 89 FMLKGLQELEVSLSRKKIPSFFLRGDPGEK-ISRFVKDYNAGTLV 132 (482)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCHHHH-HHHHHHHcCCCEEE
Confidence 345566677778899999999999987777 58888888876543
No 427
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=21.77 E-value=89 Score=20.80 Aligned_cols=37 Identities=19% Similarity=0.116 Sum_probs=23.9
Q ss_pred CccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH
Q 032013 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE 62 (149)
Q Consensus 21 ~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~ 62 (149)
.|..+++|=||++...+.. ......|...++++.+++
T Consensus 126 ~p~~~liD~~G~i~~~~~g-----~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 126 ARAVFVLDTDNTIRYVEYV-----DNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp CCEEEEECTTCBEEEEEEC-----SBTTSCCCHHHHHHHHHH
T ss_pred EEEEEEEcCCCeEEEEEec-----CCcCCCCCHHHHHHHHHh
Confidence 3788999999999874211 112234666778777764
No 428
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=21.76 E-value=76 Score=25.10 Aligned_cols=29 Identities=10% Similarity=-0.011 Sum_probs=25.3
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+||.+...
T Consensus 109 eT~e~l~a~~~ak~~Ga~~IaIT~~~~S~ 137 (366)
T 3knz_A 109 GSLSTLAAMERARNVGHITASMAGVAPAT 137 (366)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESSSSCG
T ss_pred CCHHHHHHHHHHHHcCCCEEEEECCCCCh
Confidence 34789999999999999999999987655
No 429
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=21.43 E-value=77 Score=24.69 Aligned_cols=29 Identities=10% Similarity=0.058 Sum_probs=25.1
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCCCchH
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRSPAPD 77 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~ 77 (149)
-.+.+.++++.++++|.+++.+||.+...
T Consensus 102 ~T~e~~~a~~~ak~~g~~~i~IT~~~~S~ 130 (334)
T 3hba_A 102 RSPDILAQARMAKNAGAFCVALVNDETAP 130 (334)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESCTTSG
T ss_pred CCHHHHHHHHHHHHcCCcEEEEeCCCCCh
Confidence 34788999999999999999999987655
No 430
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=21.09 E-value=2.5e+02 Score=21.39 Aligned_cols=75 Identities=9% Similarity=-0.032 Sum_probs=43.8
Q ss_pred cHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCcccccccCCChhHHHHHHhhCCCcceEEEeehHhHHHHHH
Q 032013 52 HAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCIMCIIFFLFFFSISAFILFVDLFCFMYAAA 131 (149)
Q Consensus 52 g~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~~~~p~p~~~i~~~~~~~~~~~l~~eDs~~gi~aa~ 131 (149)
...++++.+++.++++.++++..... .++ ++.. .+.....-|+..++.. ...++..--.+-+..|.
T Consensus 251 ~~~~~~~~l~~~~~~~v~~~g~~~~~----~l~--~~~~---~v~~~~~~~~~~ll~~-----ad~~v~~~G~~t~~Eal 316 (398)
T 3oti_A 251 AVEPIIAAAGEVDADFVLALGDLDIS----PLG--TLPR---NVRAVGWTPLHTLLRT-----CTAVVHHGGGGTVMTAI 316 (398)
T ss_dssp GHHHHHHHHHTSSSEEEEECTTSCCG----GGC--SCCT---TEEEESSCCHHHHHTT-----CSEEEECCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCcChh----hhc--cCCC---cEEEEccCCHHHHHhh-----CCEEEECCCHHHHHHHH
Confidence 45567777877788888888765322 011 1111 1221122244454332 34555556667889999
Q ss_pred HhCCchhhh
Q 032013 132 YVGCDLYVY 140 (149)
Q Consensus 132 ~ag~~~~~~ 140 (149)
++|.+++++
T Consensus 317 ~~G~P~v~~ 325 (398)
T 3oti_A 317 DAGIPQLLA 325 (398)
T ss_dssp HHTCCEEEC
T ss_pred HhCCCEEEc
Confidence 999999885
No 431
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=21.06 E-value=55 Score=23.36 Aligned_cols=68 Identities=9% Similarity=-0.040 Sum_probs=38.7
Q ss_pred CCCccEEEEecC-Ccccc------------ccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC--------CchH
Q 032013 19 ENLPRLVVFDLD-YTLWP------------FYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS--------PAPD 77 (149)
Q Consensus 19 ~~~~k~vifDlD-GTLld------------~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~ 77 (149)
...|..-+.|+| |.-+. +|-.|++... ...|...++.++++++|+.++-++.. +...
T Consensus 24 ~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~--~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~ 101 (208)
T 2f8a_A 24 QSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTV--RDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEE 101 (208)
T ss_dssp CCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHH--HHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHH
T ss_pred CccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHH--HHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHH
Confidence 344666677888 75433 2222332211 12456667777777788888888743 1244
Q ss_pred HHHHHHH------HcCCC
Q 032013 78 IAKTFLH------KLGIH 89 (149)
Q Consensus 78 i~~~~l~------~~gl~ 89 (149)
+..+++ ..++.
T Consensus 102 -i~~f~~~~~~~~~~~~~ 118 (208)
T 2f8a_A 102 -ILNSLKYVRPGGGFEPN 118 (208)
T ss_dssp -HHHHHHHTSSCTTCCCS
T ss_pred -HHHHHHhcccccccccc
Confidence 466676 56654
No 432
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=21.02 E-value=1.3e+02 Score=18.81 Aligned_cols=39 Identities=13% Similarity=0.231 Sum_probs=23.7
Q ss_pred HHHHHHHHHC--CceEEEEeCCCchHHHHHHHHHcCCCCCc
Q 032013 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (149)
Q Consensus 54 ~e~L~~Lk~~--Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f 92 (149)
.++++++++. ..+++++|+..........++..|..+|+
T Consensus 60 ~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l 100 (139)
T 2jk1_A 60 VDFLTEVRERWPETVRIIITGYTDSASMMAAINDAGIHQFL 100 (139)
T ss_dssp HHHHHHHHHHCTTSEEEEEESCTTCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhCCCCcEEEEeCCCChHHHHHHHHhhchhhhc
Confidence 4677777764 57888898876543234455544554443
No 433
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=20.91 E-value=1.6e+02 Score=20.03 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=23.4
Q ss_pred CCccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH
Q 032013 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE 62 (149)
Q Consensus 20 ~~~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~ 62 (149)
..|..++||=||..+....-..++........+..++|+.+++
T Consensus 100 ~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~ 142 (151)
T 3ph9_A 100 YVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKK 142 (151)
T ss_dssp CSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHH
T ss_pred CCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHH
Confidence 3478899999999887311111111111223456677776654
No 434
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=20.88 E-value=2e+02 Score=24.00 Aligned_cols=60 Identities=12% Similarity=0.088 Sum_probs=37.1
Q ss_pred HHhHHHHHhhhhc--cCCCccEEEEe--------cCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCC
Q 032013 5 EKVKNEALEIIGQ--FENLPRLVVFD--------LDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS 73 (149)
Q Consensus 5 ~~~~~~~~~~~~~--~~~~~k~vifD--------lDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~ 73 (149)
+.+++.+..+... ....+..|++| -+|.+.. +.+ +...|...+.+++|++|.+++|=+..
T Consensus 47 ~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~~rd~~G~~~~-------d~~--kFP~Glk~Lad~ih~~GlKfGIw~~p 116 (479)
T 3lrk_A 47 QLLLDTADRISDLGLKDMGYKYIILDDCWSSGRDSDGFLVA-------DEQ--KFPNGMGHVADHLHNNSFLFGMYSSA 116 (479)
T ss_dssp HHHHHHHHHHHHTTCGGGTCCEEECCSSCEEEECTTSCEEE-------CTT--TCTTCHHHHHHHHHHTTCEEEEEEES
T ss_pred HHHHHHHHHHHhcCccccCceEEEECCccccccCCCCCEec-------Chh--hcCCCHHHHHHHHHHCCCeeEEEecC
Confidence 4555555554332 22235666665 3454443 222 33346999999999999999998754
No 435
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=20.86 E-value=43 Score=22.96 Aligned_cols=40 Identities=13% Similarity=0.201 Sum_probs=27.3
Q ss_pred cCccHHHHHHHHHHCCceEEEEeCC--------CchHHHHHHHHHcCCC
Q 032013 49 LYPHAKGILEALKEKGIHVAVASRS--------PAPDIAKTFLHKLGIH 89 (149)
Q Consensus 49 ~~pg~~e~L~~Lk~~Gi~i~IaT~~--------~~~~i~~~~l~~~gl~ 89 (149)
..|...++.++++++|+.++.++.. +... ...+++..++.
T Consensus 64 ~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~-~~~~~~~~~~~ 111 (196)
T 2ywi_A 64 VQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPEN-MKKVAEELGYP 111 (196)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHH-HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHH-HHHHHHHcCCC
Confidence 3455556666777778998888863 3455 57788888764
No 436
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=20.85 E-value=2.8e+02 Score=21.05 Aligned_cols=85 Identities=8% Similarity=0.015 Sum_probs=54.2
Q ss_pred cHHHHHHHHHHCCceEEEEeCCCchHHHHHHHHHcCCCCCccccc-----ccCCChhHHHHHHhhCCCcceEEEe---eh
Q 032013 52 HAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV-----RLSCCIMCIIFFLFFFSISAFILFV---DL 123 (149)
Q Consensus 52 g~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~~l~~~gl~~~f~~~~-----~~~p~p~~~i~~~~~~~~~~~l~~e---Ds 123 (149)
...++++..++.|..+.+-.++. ++ ++..+ .+|.+ +..++ ..+++.....-+...++....++-| .+
T Consensus 157 ~l~~l~~~a~~lGl~~lvevh~~-eE-l~~A~-~~ga~--iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~t 231 (272)
T 3tsm_A 157 LAKELEDTAFALGMDALIEVHDE-AE-MERAL-KLSSR--LLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFT 231 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSH-HH-HHHHT-TSCCS--EEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEEESSCCS
T ss_pred HHHHHHHHHHHcCCeEEEEeCCH-HH-HHHHH-hcCCC--EEEECCCCCccCCCChHHHHHHHHhCCCCCcEEEECCCCC
Confidence 46688899999999888777653 33 23222 34432 22332 2344543333444455555667888 78
Q ss_pred HhHHHHHHHhCCchhhhh
Q 032013 124 FCFMYAAAYVGCDLYVYK 141 (149)
Q Consensus 124 ~~gi~aa~~ag~~~~~~~ 141 (149)
+..+....++|++.+++-
T Consensus 232 ~edv~~l~~~Ga~gvLVG 249 (272)
T 3tsm_A 232 HEDCLRLEKSGIGTFLIG 249 (272)
T ss_dssp HHHHHHHHTTTCCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 899999999999988764
No 437
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=20.85 E-value=2.2e+02 Score=24.82 Aligned_cols=49 Identities=16% Similarity=0.108 Sum_probs=31.9
Q ss_pred CccEEEEecCCcccc------ccccccccCCCCccCccHHHHHHHHHHCCceEEEEeC
Q 032013 21 LPRLVVFDLDYTLWP------FYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASR 72 (149)
Q Consensus 21 ~~k~vifDlDGTLld------~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~ 72 (149)
.+..+++| ||=..+ +...|..+.+ +...|...+.++++++|.+++|=+.
T Consensus 359 G~e~fviD-DGWf~~r~~d~~~lGdW~~d~~--kFP~Glk~Lad~vh~~GmkfGLW~e 413 (729)
T 4fnq_A 359 GIELFVLD-DGWFGKRDDDRRSLGDWIVNRR--KLPNGLDGLAKQVNELGMQFGLWVE 413 (729)
T ss_dssp TCCEEEEC-SCCBTTCCSTTSCTTCCSBCTT--TCTTHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccEEEEc-ceeecCCCCCcccCCcEEEChh--hcCccHHHHHHHHHHCCCEEEEEee
Confidence 46778887 553221 1112223322 4556899999999999999999874
No 438
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=20.80 E-value=22 Score=23.14 Aligned_cols=36 Identities=6% Similarity=-0.066 Sum_probs=22.1
Q ss_pred HHHHHHHHHHCCceEEEEeCC-CchHHHHHHHHHcCCC
Q 032013 53 AKGILEALKEKGIHVAVASRS-PAPDIAKTFLHKLGIH 89 (149)
Q Consensus 53 ~~e~L~~Lk~~Gi~i~IaT~~-~~~~i~~~~l~~~gl~ 89 (149)
..++.+.++++|+.++-+|-. .... ....++..++.
T Consensus 54 l~~l~~~~~~~~~~vv~vs~d~~~~~-~~~~~~~~~~~ 90 (143)
T 4fo5_A 54 LANEVNKFGPDKIAMCSISMDEKESI-FTETVKIDKLD 90 (143)
T ss_dssp HHHHHTTSCTTTEEEEEEECCSCHHH-HHHHHHHHTCC
T ss_pred HHHHHHHhCcCCEEEEEEEccCCHHH-HHHHHHHhCCC
Confidence 334444444457777777754 3445 67888888875
No 439
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=20.80 E-value=1.1e+02 Score=21.83 Aligned_cols=53 Identities=17% Similarity=0.089 Sum_probs=32.4
Q ss_pred EEEecCCccccccccccccCCCCccCccHHHHHHHHHHCCceEEEEeCCCchHHHHH---HHHHcCCC
Q 032013 25 VVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKT---FLHKLGIH 89 (149)
Q Consensus 25 vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~~Gi~i~IaT~~~~~~i~~~---~l~~~gl~ 89 (149)
++.=+=|+.+.. + ......+.+.+..+++ |++++|++|+. .. +.. .++.+|++
T Consensus 3 iViK~GGs~l~~-----~----~~~~~~~~~~i~~l~~-g~~vvlV~ggG-~~-~~~~~~~~~~~g~~ 58 (219)
T 2ij9_A 3 VVLSLGGSVLSN-----E----SEKIREFAKTIESVAQ-QNQVFVVVGGG-KL-AREYIKSARELGAS 58 (219)
T ss_dssp EEEEECSSTTTT-----C----HHHHHHHHHHHHHHHH-HSEEEEEECCH-HH-HHHHHHHHHHTTCC
T ss_pred EEEEeChhhhCC-----h----HHHHHHHHHHHHHHcC-CCEEEEEECcc-hH-hcchHHHHHHcCCC
Confidence 445556666641 0 1233455667777878 99999999862 33 344 56777763
No 440
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=20.76 E-value=1.2e+02 Score=19.15 Aligned_cols=23 Identities=26% Similarity=0.315 Sum_probs=17.3
Q ss_pred HHHHHHHHHC----CceEEEEeCCCch
Q 032013 54 KGILEALKEK----GIHVAVASRSPAP 76 (149)
Q Consensus 54 ~e~L~~Lk~~----Gi~i~IaT~~~~~ 76 (149)
.++++++++. ..+++++|+....
T Consensus 63 ~~~~~~l~~~~~~~~~~ii~ls~~~~~ 89 (138)
T 3c3m_A 63 WETLERIKTDPATRDIPVLMLTAKPLT 89 (138)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEESSCCC
T ss_pred HHHHHHHHcCcccCCCCEEEEECCCCh
Confidence 4778888764 5789999987644
No 441
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=20.59 E-value=64 Score=24.99 Aligned_cols=34 Identities=15% Similarity=0.019 Sum_probs=23.0
Q ss_pred ccEEEEecCCccccccccccccCCCCccCccHHHHHHHHHH
Q 032013 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE 62 (149)
Q Consensus 22 ~k~vifDlDGTLld~~~~~~~~~~~~~~~pg~~e~L~~Lk~ 62 (149)
+.++++|=||++...+ ..+++...+.|+|+.+++
T Consensus 103 r~tfiId~~G~i~~~~-------~~v~~~~h~~~~l~~~~~ 136 (322)
T 4eo3_A 103 RSTFLIDRWGFVRKEW-------RRVKVEGHVQEVKEALDR 136 (322)
T ss_dssp CEEEEECTTSBEEEEE-------ESCCSTTHHHHHHHHHHH
T ss_pred cEEEEECCCCEEEEEE-------eCCCccccHHHHHHHHhh
Confidence 4678999999997532 224555667777776665
No 442
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=20.48 E-value=32 Score=23.48 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=20.4
Q ss_pred ccHHHHHHHHHHCC-ceEEEEeCC
Q 032013 51 PHAKGILEALKEKG-IHVAVASRS 73 (149)
Q Consensus 51 pg~~e~L~~Lk~~G-i~i~IaT~~ 73 (149)
|...+.++.+++.| .++.+|+++
T Consensus 85 ~~~~~ll~~~~~~G~v~~~aC~~~ 108 (144)
T 2qs7_A 85 PMWHQLVQQAKEIGEVKVFACSTT 108 (144)
T ss_dssp CCHHHHHHHHHHHSEEEEEEEHHH
T ss_pred CCHHHHHHHHHHCCCeEEEEeHHH
Confidence 57889999999999 999999865
No 443
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=20.21 E-value=1.6e+02 Score=21.32 Aligned_cols=37 Identities=14% Similarity=0.171 Sum_probs=21.6
Q ss_pred HHHHHHHHHHC--CceE-EEEeCCCchHHHHHHHHHcCCCC
Q 032013 53 AKGILEALKEK--GIHV-AVASRSPAPDIAKTFLHKLGIHS 90 (149)
Q Consensus 53 ~~e~L~~Lk~~--Gi~i-~IaT~~~~~~i~~~~l~~~gl~~ 90 (149)
+..+|+.+++. ++.+ +|+|+++... +....++.|++-
T Consensus 17 ~~~~l~~l~~~~l~~~I~~Vit~~~~~~-v~~~A~~~gIp~ 56 (212)
T 3av3_A 17 FQAIVDAAKRGDLPARVALLVCDRPGAK-VIERAARENVPA 56 (212)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEESSTTCH-HHHHHHHTTCCE
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCCcH-HHHHHHHcCCCE
Confidence 44566666655 3333 4666665555 466667777654
No 444
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=20.20 E-value=36 Score=21.13 Aligned_cols=24 Identities=13% Similarity=0.267 Sum_probs=18.0
Q ss_pred HHHHHHHHH----CCceEEEEeCCCchH
Q 032013 54 KGILEALKE----KGIHVAVASRSPAPD 77 (149)
Q Consensus 54 ~e~L~~Lk~----~Gi~i~IaT~~~~~~ 77 (149)
.++++++++ .+.+++++|+.....
T Consensus 62 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~ 89 (127)
T 2jba_A 62 IQFIKHLRRESMTRDIPVVMLTARGEEE 89 (127)
T ss_dssp HHHHHHHHTSTTTTTSCEEEEEETTHHH
T ss_pred HHHHHHHHhCcccCCCCEEEEeCCCCHH
Confidence 478888876 368999999876544
No 445
>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protei; structural genomics, structural genomics consortium, unknown function; 2.00A {Homo sapiens}
Probab=20.08 E-value=46 Score=24.96 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=18.5
Q ss_pred CceEEEEeCCCchHHHHHHHHHcCCC
Q 032013 64 GIHVAVASRSPAPDIAKTFLHKLGIH 89 (149)
Q Consensus 64 Gi~i~IaT~~~~~~i~~~~l~~~gl~ 89 (149)
..+++++|+++++ +++|+++|+.
T Consensus 3 ~~~lILAS~SPrR---~eLL~~~Gi~ 25 (230)
T 2p5x_A 3 HKRVVLASASPRR---QEILSNAGLR 25 (230)
T ss_dssp TSCEEECCCCHHH---HHHHHHTTCC
T ss_pred CCcEEEeCCCHHH---HHHHHHCCCC
Confidence 4679999999875 4789999985
Done!