Query 032014
Match_columns 149
No_of_seqs 116 out of 547
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 13:26:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nep_A EPV20, BNPC2, epididyma 100.0 1.7E-30 5.7E-35 183.1 12.3 123 20-142 2-130 (130)
2 1xwv_A DER F II; beta sheets, 100.0 4.2E-30 1.4E-34 180.9 9.9 121 20-141 2-128 (129)
3 2ag4_A GM2-AP, ganglioside GM2 99.9 5.2E-25 1.8E-29 160.6 14.0 121 19-141 3-162 (164)
4 3m7o_A Lymphocyte antigen 86; 99.9 5.8E-23 2E-27 147.7 10.8 112 22-138 41-159 (162)
5 3mtx_A Protein MD-1; LY86, RP1 99.8 5.8E-18 2E-22 119.7 13.4 118 21-143 19-143 (151)
6 3vq2_C Lymphocyte antigen 96; 99.7 5.9E-16 2E-20 109.0 13.6 118 20-141 15-140 (144)
7 2e56_A Lymphocyte antigen 96; 99.3 1.4E-10 4.9E-15 80.7 14.2 118 21-142 16-141 (144)
8 2r5o_A Putative ATP binding co 95.5 0.16 5.6E-06 36.6 9.9 93 33-127 47-149 (188)
9 3idu_A Uncharacterized protein 94.7 0.31 1E-05 33.3 9.0 82 33-128 18-100 (127)
10 1kmt_A RHO GDP-dissociation in 94.5 0.24 8.2E-06 34.5 8.0 95 46-143 41-138 (141)
11 1doa_B RHO GDI 1, protein (GDP 93.9 0.17 5.9E-06 37.7 6.6 94 47-143 120-216 (219)
12 1ds6_B RHO GDP-dissociation in 93.7 0.28 9.6E-06 35.5 7.3 94 47-143 81-177 (180)
13 2vtc_A CEL61B, cellulase; hydr 92.5 0.39 1.3E-05 36.5 7.0 38 103-140 160-205 (249)
14 1lyq_A PCOC copper resistance 92.0 0.46 1.6E-05 31.1 6.0 27 104-131 69-95 (104)
15 2f1e_A Protein APAG; APAG prot 91.9 1.2 4.3E-05 30.3 8.2 50 92-143 72-123 (127)
16 2c9r_A COPC, copper resistance 91.6 0.55 1.9E-05 30.6 6.0 27 104-131 67-93 (102)
17 1xvs_A Protein APAG; MCSG APC2 91.4 1.2 4.1E-05 30.3 7.7 50 92-143 71-122 (126)
18 1tza_A APAG protein, SOR45; st 91.3 1.3 4.5E-05 30.5 7.9 49 92-142 71-121 (134)
19 1xq4_A Protein APAG; all beta 91.2 1.3 4.5E-05 30.6 7.9 50 92-143 76-127 (139)
20 2l0d_A Cell surface protein; s 89.7 3.2 0.00011 27.6 9.6 83 34-128 5-88 (114)
21 3eja_A Protein GH61E; beta san 89.0 1.6 5.4E-05 32.3 7.2 38 102-139 117-162 (208)
22 4eir_A Polysaccharide monooxyg 88.3 2 6.9E-05 32.0 7.4 38 103-140 133-178 (223)
23 2kut_A Uncharacterized protein 87.5 0.44 1.5E-05 32.3 3.1 86 39-128 5-96 (122)
24 4eis_A Polysaccharide monooxyg 86.2 2.9 9.9E-05 31.2 7.2 37 103-139 136-180 (225)
25 1v10_A Laccase; multicopper bl 84.8 1.2 4E-05 37.0 5.0 15 91-105 104-119 (521)
26 3zud_A GH61 isozyme A; hydrola 83.3 3.9 0.00013 30.6 6.8 37 103-139 140-184 (228)
27 1nep_A EPV20, BNPC2, epididyma 82.0 1.8 6.2E-05 29.2 4.2 39 85-123 20-59 (130)
28 1xwv_A DER F II; beta sheets, 81.8 1.9 6.6E-05 29.0 4.3 39 85-123 18-58 (129)
29 3isy_A Bsupi, intracellular pr 81.0 2.6 9E-05 28.3 4.7 78 48-126 16-104 (120)
30 1suj_A CONE arrestin; sensory 77.9 16 0.00055 29.4 9.1 82 36-124 36-148 (392)
31 1aoz_A Ascorbate oxidase; oxid 76.8 3.2 0.00011 34.6 5.0 16 91-106 79-95 (552)
32 3sqr_A Laccase; multicopper ox 75.3 3.3 0.00011 35.0 4.6 16 91-106 143-159 (580)
33 3c12_A FLGD, flagellar protein 71.3 2.9 0.0001 28.4 2.9 20 112-131 80-99 (138)
34 3tas_A Small laccase, multi-co 71.0 2 6.7E-05 33.2 2.1 55 47-109 47-102 (313)
35 3pdd_A Glycoside hydrolase, fa 69.7 27 0.00091 24.8 7.9 63 48-131 15-77 (190)
36 3t6v_A Laccase; beta barrel, o 68.4 14 0.00048 30.4 6.8 16 91-106 84-100 (495)
37 3zx1_A Oxidoreductase, putativ 68.2 3.7 0.00013 33.9 3.3 16 91-106 121-137 (481)
38 1pfs_A PF3 SSDBP, PF3 single-s 67.5 15 0.00051 22.4 5.1 30 101-130 37-66 (78)
39 3pxl_A Laccase; 4-copper prote 66.6 16 0.00053 30.2 6.8 16 91-106 83-99 (499)
40 2p9r_A Alpha-2-M, alpha-2-macr 63.4 11 0.00038 23.7 4.3 26 96-123 59-84 (102)
41 3vmn_A Dextranase; TIM barrel, 63.4 19 0.00065 30.9 6.7 89 47-141 19-112 (643)
42 2zwn_A Two-domain type laccase 63.3 6.9 0.00024 30.4 3.9 16 91-106 79-95 (339)
43 3t9w_A Small laccase, multi-co 63.1 4 0.00014 31.3 2.4 18 90-107 98-116 (299)
44 1iq6_A (R)-hydratase, (R)-spec 61.8 29 0.00098 22.3 6.5 38 93-131 86-124 (134)
45 4ffu_A Oxidase; structural gen 60.8 29 0.001 24.2 6.5 50 92-141 114-168 (176)
46 1sdd_A Coagulation factor V; c 60.8 5.6 0.00019 30.5 2.9 15 92-106 111-126 (306)
47 3m7o_A Lymphocyte antigen 86; 60.6 10 0.00036 26.8 4.0 30 44-73 112-142 (162)
48 3pe9_A Fibronectin(III)-like m 60.4 30 0.001 22.0 11.1 67 54-140 19-86 (98)
49 1q6w_A Monoamine oxidase regul 59.8 25 0.00086 23.7 5.9 45 92-138 104-153 (161)
50 3exz_A MAOC-like dehydratase; 58.0 32 0.0011 23.1 6.2 49 92-140 89-142 (154)
51 1zpu_A Iron transport multicop 57.2 8.8 0.0003 31.9 3.7 16 91-106 79-95 (534)
52 2r7e_B Coagulation factor VIII 56.3 3.8 0.00013 35.9 1.3 52 47-105 204-256 (770)
53 3pdd_A Glycoside hydrolase, fa 55.3 52 0.0018 23.2 9.8 46 68-131 124-169 (190)
54 3g5w_A Multicopper oxidase typ 55.0 6.5 0.00022 30.4 2.4 16 91-106 78-94 (318)
55 1roc_A Anti-silencing protein 54.3 21 0.00073 25.0 4.7 76 33-110 4-81 (155)
56 2hue_A Anti-silencing protein 53.9 25 0.00085 25.1 5.0 76 32-110 8-86 (175)
57 1hfu_A Laccase 1; oxidoreducta 53.2 6.1 0.00021 32.5 2.0 15 91-105 83-98 (503)
58 1vjj_A Protein-glutamine gluta 52.9 51 0.0017 28.6 7.7 77 46-126 31-119 (692)
59 2q9o_A Laccase-1; multicopper 52.8 16 0.00053 30.5 4.5 16 91-106 112-129 (559)
60 2idc_A Anti-silencing protein 52.0 26 0.00087 25.1 4.9 76 33-110 5-82 (179)
61 3kw8_A Laccase, putative coppe 51.7 6.6 0.00022 29.6 1.9 52 47-106 41-93 (276)
62 1ex0_A Coagulation factor XIII 50.2 27 0.00093 30.4 5.6 78 46-126 76-166 (731)
63 2i32_A Anti-silencing factor 1 50.1 31 0.001 24.8 5.0 78 33-113 28-110 (182)
64 2cu9_A Spcia1, histone chapero 49.3 28 0.00096 24.5 4.7 79 33-114 3-86 (161)
65 2xom_A Arabinogalactan endo-1, 48.2 62 0.0021 22.0 7.2 30 99-130 58-87 (152)
66 2uxt_A Protein SUFI, SUFI; oxi 47.0 8.4 0.00029 31.2 1.9 15 92-106 90-105 (451)
67 3mtx_A Protein MD-1; LY86, RP1 46.7 30 0.001 24.1 4.4 31 43-73 90-121 (151)
68 1yew_A Particulate methane mon 45.3 1.2E+02 0.004 24.3 10.8 87 33-131 14-118 (382)
69 2io5_A ASF1A protein; chaperon 45.3 36 0.0012 24.3 4.7 78 33-113 6-88 (175)
70 1dyo_A Endo-1,4-beta-xylanase 44.7 66 0.0023 21.9 6.1 35 95-129 65-100 (160)
71 2r51_A Vacuolar protein sortin 43.4 72 0.0025 25.0 6.7 74 47-124 45-139 (340)
72 2xu9_A Laccase; oxidoreductase 42.5 23 0.0008 28.4 3.9 24 91-117 85-109 (439)
73 2q3z_A Transglutaminase 2; tra 42.2 1.7E+02 0.0058 25.3 10.4 79 46-126 33-124 (687)
74 3gdc_A Multicopper oxidase; be 41.8 17 0.0006 27.4 2.9 16 91-106 107-123 (288)
75 2h6o_A Major outer envelope gl 39.4 90 0.0031 24.7 6.5 31 46-76 173-203 (470)
76 2y72_A Collagenase, collagenas 39.0 63 0.0021 19.4 5.6 18 113-130 57-74 (85)
77 1g4m_A Beta-arrestin1; sensory 38.6 1.4E+02 0.0046 23.8 7.8 50 94-145 261-356 (393)
78 3klq_A Putative pilus anchorin 37.3 79 0.0027 21.6 5.4 40 96-135 59-103 (141)
79 3cg8_A Laccase; oxidoreductase 36.3 15 0.00051 28.6 1.7 16 91-106 118-134 (343)
80 3abg_A Bilirubin oxidase; clea 35.8 21 0.00073 29.6 2.7 16 90-105 107-123 (534)
81 1g0d_A Protein-glutamine gamma 35.6 1.1E+02 0.0036 26.6 7.0 81 46-127 34-118 (695)
82 2le2_A P56; UDG inhibition, DN 35.4 34 0.0011 19.2 2.6 17 115-131 8-24 (56)
83 2j5w_A Ceruloplasmin, ferroxid 34.5 30 0.001 31.3 3.6 16 91-106 145-161 (1065)
84 4f27_A Clumping factor B; DEV- 34.1 82 0.0028 24.1 5.7 41 32-72 38-81 (363)
85 1b4r_A Protein (PKD1_human); P 33.2 82 0.0028 19.2 4.5 16 114-129 54-69 (80)
86 2b3n_A Hypothetical protein AF 32.8 1E+02 0.0035 20.9 5.5 16 115-131 134-149 (159)
87 3vq2_C Lymphocyte antigen 96; 32.7 71 0.0024 22.0 4.5 29 43-71 88-117 (144)
88 1j8r_A PAPG adhesin, pyeloneph 31.7 74 0.0025 22.6 4.5 23 102-124 134-156 (196)
89 2r7e_A Coagulation factor VIII 31.5 19 0.00063 31.3 1.7 56 47-110 457-518 (742)
90 3uam_A Chitin binding domain; 31.3 1.3E+02 0.0044 22.1 6.0 88 46-139 108-216 (216)
91 2fau_A Vacuolar protein sortin 29.8 2E+02 0.0068 22.5 7.4 74 47-124 45-139 (341)
92 3b72_A Lysozyme C; hen egg-whi 29.6 9.6 0.00033 26.4 -0.4 24 1-26 1-24 (147)
93 3aw5_A Multicopper oxidase; be 29.2 38 0.0013 27.3 3.1 15 92-106 78-93 (448)
94 3rfr_A PMOB; membrane, oxidore 27.1 2.5E+02 0.0085 22.7 11.3 97 33-141 42-156 (419)
95 1w8o_A Bacterial sialidase; 3D 26.8 1.9E+02 0.0066 23.6 7.1 37 95-131 411-448 (601)
96 2kps_A Uncharacterized protein 26.0 46 0.0016 21.0 2.5 17 95-111 55-71 (98)
97 2kpn_A Bacillolysin; solution 26.0 1.3E+02 0.0045 19.2 5.7 27 114-141 58-84 (103)
98 3od3_A Blue copper oxidase CUE 25.7 16 0.00056 30.1 0.3 16 91-106 87-103 (488)
99 2r39_A FIXG-related protein; s 25.3 1.4E+02 0.0047 19.1 6.1 33 95-127 69-103 (118)
100 2f68_X Collagen adhesin; beta 24.5 54 0.0019 25.2 3.1 89 33-124 14-115 (313)
101 2kzw_A Uncharacterized protein 22.8 65 0.0022 22.0 2.9 19 112-130 111-129 (145)
102 2r7e_A Coagulation factor VIII 22.8 37 0.0013 29.4 2.0 16 91-106 125-141 (742)
103 1jb0_F Photosystem 1 reaction 22.6 22 0.00075 25.1 0.4 29 1-29 1-34 (164)
104 2yrl_A KIAA1837 protein; PKD d 22.4 1.5E+02 0.0051 18.5 5.4 27 114-141 68-94 (102)
105 3osv_A Flagellar basal-BODY RO 21.7 81 0.0028 21.0 3.2 18 112-130 78-95 (138)
106 2hr0_A Complement C3 beta chai 21.5 1.1E+02 0.0037 25.6 4.6 23 102-124 167-189 (645)
107 3v9f_A Two-component system se 21.4 1.1E+02 0.0038 25.8 4.7 19 111-129 744-762 (781)
108 3gyr_A PHS, phenoxazinone synt 21.2 61 0.0021 26.8 3.0 15 91-105 145-160 (612)
109 1gui_A Laminarinase 16A; carbo 20.2 1.6E+02 0.0054 19.4 4.5 14 94-107 68-82 (155)
110 3v0r_A Major allergen ALT A 1; 20.0 2.1E+02 0.0072 19.3 5.6 15 91-105 4-19 (133)
No 1
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=99.97 E-value=1.7e-30 Score=183.14 Aligned_cols=123 Identities=15% Similarity=0.293 Sum_probs=108.9
Q ss_pred ccceeecCCCCC--CcEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEE--ccCCcCCCC-ccCCC
Q 032014 20 AIDFTYCDDEEN--FPLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRV--HSETHDICE-EVSCP 94 (149)
Q Consensus 20 ~~~~~~C~~~~~--~~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~--~~~~~d~C~-~~~CP 94 (149)
++.|++|++..+ ..++|++|+..||+++||++++|+++|+++++++++++++.++++|+++ +....|+|+ ++.||
T Consensus 2 ~~~f~~C~~~~~~i~~V~V~~C~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CP 81 (130)
T 1nep_A 2 PVKFKDCGSWVGVIKEVNVSPCPTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCP 81 (130)
T ss_dssp BCCCEESCCCSEEEEEEEEESCSSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSS
T ss_pred CcEEEECCCCCCeEeEEEECCCCCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCc
Confidence 578999998543 3566777777777889999999999999999999999999999999765 456789997 58999
Q ss_pred CCCCc-EEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEEEEEEEEEEEec
Q 032014 95 IEAGN-FVLSHAETLPGYTPPGVYTLKMKMIGKNGYQLTCFSFKFKIGF 142 (149)
Q Consensus 95 l~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i~C~~~~~~i~~ 142 (149)
+++|+ |+|+++++|++.+|.++|+++|+|+|++|+.++|++++++|++
T Consensus 82 l~~G~~~~y~~~lpV~~~~P~~~~~v~~~L~d~~~~~l~C~~~~~~I~~ 130 (130)
T 1nep_A 82 IEKDKTYNYVNKLPVKNEYPSIKVVVEWELTDDKNQRFFCWQIPIEVEA 130 (130)
T ss_dssp BCTTCEEEEEEEEECCTTSCSSEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred ccCCcEEEEEEEeEecccCCCccEEEEEEEEcCCCCEEEEEEEeEEEEC
Confidence 99996 9999999999999999999999999999999999999999974
No 2
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=99.96 E-value=4.2e-30 Score=180.88 Aligned_cols=121 Identities=21% Similarity=0.377 Sum_probs=109.7
Q ss_pred ccceeecCCCCCCcEEEeEE-EEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEc--cCCcCCCCccCCCCC
Q 032014 20 AIDFTYCDDEENFPLKVQQI-KIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVH--SETHDICEEVSCPIE 96 (149)
Q Consensus 20 ~~~~~~C~~~~~~~~~i~~v-~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~--~~~~d~C~~~~CPl~ 96 (149)
++.|++|+++....++|++| +..||+++||++++++++|++++++++++.++.++++|+++| ....|+|+++.||++
T Consensus 2 ~~~~~~C~~~~~~~V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~ 81 (129)
T 1xwv_A 2 QVDVKDCANNEIKKVMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLV 81 (129)
T ss_dssp BBCCEESSSSCEEEEEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBC
T ss_pred CceEEECcCCCccEEEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCccc
Confidence 57899999855457777788 777889999999999999999999999999999999987554 678899999999999
Q ss_pred CCc-EEEEEEEEeCCCCCCeE-EEEEEEEEeCCCCEEEEE-EEEEEEe
Q 032014 97 AGN-FVLSHAETLPGYTPPGV-YTLKMKMIGKNGYQLTCF-SFKFKIG 141 (149)
Q Consensus 97 ~G~-~~~~~~~~ip~~~P~g~-y~v~~~l~d~~~~~i~C~-~~~~~i~ 141 (149)
+|+ |+|+++++|++.+|.++ |+++|+|+|++| .++|+ .++++|+
T Consensus 82 ~G~~~~y~~~~~v~~~~P~v~~~~v~~~L~d~~~-~l~Cf~~~~~~I~ 128 (129)
T 1xwv_A 82 KGQQYDAKYTWNVPKIAPKSENVVVTVKLVGDNG-VLACAIATHAKIR 128 (129)
T ss_dssp TTCEEEEEEEEECCTTSCCBSCEEEEEEEEETTE-EEEEEEECCEEEE
T ss_pred CCEEEEEEEEeEecccCCCCceEEEEEEEEcCCC-cEEEEecccEEEe
Confidence 997 99999999999999999 999999999878 89999 9999986
No 3
>2ag4_A GM2-AP, ganglioside GM2 activator; complex of single chain lipid and fatty acids, lipid binding; HET: LP3 OLA; 1.80A {Homo sapiens} SCOP: b.95.1.1 PDB: 1tjj_A* 2af9_A* 2ag2_A* 1pu5_A* 2ag9_A* 1g13_A* 1pub_A* 2agc_A*
Probab=99.93 E-value=5.2e-25 Score=160.60 Aligned_cols=121 Identities=21% Similarity=0.486 Sum_probs=106.7
Q ss_pred cccceeecCCCCCCcEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCc-EEEEEEEE---ce-EEEccCC-------cC
Q 032014 19 QAIDFTYCDDEENFPLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGG-KVMIEVRY---FG-IRVHSET-------HD 86 (149)
Q Consensus 19 ~~~~~~~C~~~~~~~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~---~~-~~~~~~~-------~d 86 (149)
..+.|++|+++ ++.++|++++++|+|+++|+++++++++.+++++++| ++++.+++ |+ +++|..+ .|
T Consensus 3 ~~~~~~~C~~~-~~~~~i~~v~i~PdP~~~g~~~ti~~~~~l~~~i~~g~k~~v~v~~~~~g~~i~l~~~~~~GSC~y~D 81 (164)
T 2ag4_A 3 SSFSWDNCDEG-KDPAVIRSLTLEPDPIVVPGNVTLSVVGSTSVPLSSPLKVDLVLEKEVAGLWIKIPCTDYIGSCTFEH 81 (164)
T ss_dssp CCCEEEESSTT-TCSEEEEEEEEESSSEEESEEEEEEEEEEESSCBCSSCEEEEEEEEEETTEEEECBCBTTBSBCEECC
T ss_pred ccCEEecCCCC-CceEEEeEEEEeCCCCCCCCceEEEEEEEEeeccCCCCEEEEEEEEEecCceEEeeeeCCcCcccccc
Confidence 46789999885 6699999999999999999999999999999999999 57777765 33 6888876 79
Q ss_pred CCCcc---------------------CCCCCCCcEEEEEEE------EeCCCCCCeEEEEEEEEEeCCCCEEEEEEEEEE
Q 032014 87 ICEEV---------------------SCPIEAGNFVLSHAE------TLPGYTPPGVYTLKMKMIGKNGYQLTCFSFKFK 139 (149)
Q Consensus 87 ~C~~~---------------------~CPl~~G~~~~~~~~------~ip~~~P~g~y~v~~~l~d~~~~~i~C~~~~~~ 139 (149)
+|+.+ +||++||.|.++.+. .+|.++|+|+|++++.+.| +|++++|++++++
T Consensus 82 lC~~l~~~~~~~~~~~~~~~~~g~~~~CPi~~G~Y~l~~~~~~lp~~~lP~~l~~G~Y~v~~~~~~-~~~~l~Ci~~~~~ 160 (164)
T 2ag4_A 82 FCDVLDMLIPTGEPCPEPLRTYGLPCHCPFKEGTYSLPKSEFVVPDLELPSWLTTGNYRIESVLSS-SGKRLGCIKIAAS 160 (164)
T ss_dssp HHHHHHHHSCTTSCCCTTHHHHTCCCSSCBCSEEEEEEEEEEEECCCCCCTTCSSEEEEEEEEEEE-TTEEEEEEEEEEE
T ss_pred hhHhhhhhcccccccCcccccCCccccCCCCCcEEEEeeeEeecCcccccCccCCceEEEEEEEec-CCCEEEEEEEEEE
Confidence 99853 899999999887765 8899999999999999987 8999999999999
Q ss_pred Ee
Q 032014 140 IG 141 (149)
Q Consensus 140 i~ 141 (149)
+.
T Consensus 161 l~ 162 (164)
T 2ag4_A 161 LK 162 (164)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 4
>3m7o_A Lymphocyte antigen 86; beta sheet, glycoprotein, immunity, inflammatory response, I immunity, secreted, immune system; HET: NAG L9R NDG; 1.65A {Mus musculus} PDB: 3t6q_C* 3b2d_C* 3rg1_C*
Probab=99.89 E-value=5.8e-23 Score=147.71 Aligned_cols=112 Identities=16% Similarity=0.250 Sum_probs=101.2
Q ss_pred ceeecCCCCCCcEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCc-----cCCCCC
Q 032014 22 DFTYCDDEENFPLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEE-----VSCPIE 96 (149)
Q Consensus 22 ~~~~C~~~~~~~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~-----~~CPl~ 96 (149)
.|++|++..+ -+++++||++++|+++++++.|.+++++.+..+++.+++++++++..++|+|++ ..||++
T Consensus 41 ~Y~~CD~~q~-----~~vsi~PC~~~~G~nl~i~a~~Ilr~dI~~ly~~l~v~~~~i~l~~~~~~lCe~~~~~~sfCp~~ 115 (162)
T 3m7o_A 41 VYQSCDPLQD-----FGLSIDQCSKQIQSNLNIRFGIILRQDIRKLFLDITLMAKGSSILNYSYPLCEEDQPKFSFCGRR 115 (162)
T ss_dssp EEEECCTTCC-----CEEEESSCCSEECSSCEEEEEEECSSCCSEEEEEEEEEETTEEEEEEEEEEEETTBSSSSSTTCC
T ss_pred EEEeCCCCCC-----ceEECCCCCCCCCCcEEEEEEEEEcccceeeEEEEEEEECCEEccccccccccCCCCccccCCcC
Confidence 4789987543 566999999999999999999999999997678899999999999999999986 369999
Q ss_pred CCc-EEEEEEEEeCC-CCCCeEEEEEEEEEeCCCCEEEEEEEEE
Q 032014 97 AGN-FVLSHAETLPG-YTPPGVYTLKMKMIGKNGYQLTCFSFKF 138 (149)
Q Consensus 97 ~G~-~~~~~~~~ip~-~~P~g~y~v~~~l~d~~~~~i~C~~~~~ 138 (149)
+|+ +.++..+.+|. .+|+|+|++.+++.++|++.++|+++.+
T Consensus 116 KGE~v~~~~~v~~p~~e~P~G~Y~v~aea~~~d~~~i~Cln~TI 159 (162)
T 3m7o_A 116 KGEQIYYAGPVNNPGLDVPQGEYQLLLELYNENRATVACANATV 159 (162)
T ss_dssp TTCEEEEEEECCCCEEECCSEEEEEEEEEEETTCCEEEEEEEEE
T ss_pred CCeEEEEEEEeecCceecCCCcEEEEEEEEcCCCCEEEEeEEEE
Confidence 997 78899999999 5999999999999999999999999965
No 5
>3mtx_A Protein MD-1; LY86, RP105 associated protein, immune system; HET: PGT PGE; 2.00A {Gallus gallus} PDB: 3mu3_A*
Probab=99.78 E-value=5.8e-18 Score=119.70 Aligned_cols=118 Identities=19% Similarity=0.255 Sum_probs=106.0
Q ss_pred cceeecCCCCCCcEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCc-----cCCCC
Q 032014 21 IDFTYCDDEENFPLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEE-----VSCPI 95 (149)
Q Consensus 21 ~~~~~C~~~~~~~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~-----~~CPl 95 (149)
+.|+.|++-.+ -+++++||+..+|++.++++.+.+++++.+..+++.+.++++.++..++++|++ .-||.
T Consensus 19 i~Y~~CD~~q~-----~~isi~pC~~~~~~~l~I~~~~IlR~dIkelY~~l~v~~~~~~ll~~~e~LCe~~~~~~sfC~~ 93 (151)
T 3mtx_A 19 IYYKSCDPQQD-----FAFSIDRCSDVTTHTFDIRAAMVLRQSIKELYAKVDLIINGKTVLSYSETLCGPGLSKLIFCGK 93 (151)
T ss_dssp EEEEECCTTCC-----CEEEESCGGGGGGTEEEEEEEEECCSCCSSEEEEEEEEETTEEEEEEEEEEESTTCCCSTTTTC
T ss_pred EEEEecCCccC-----cEEEcccCccccCCcEEEEEEEEEhhhhheeEEEEEEEECcEeeeecccccccCCCCcccccCc
Confidence 56899977443 588999999999999999999999999999888999999999999999999986 46999
Q ss_pred CCCc-EEEEEEEEeCC-CCCCeEEEEEEEEEeCCCCEEEEEEEEEEEecc
Q 032014 96 EAGN-FVLSHAETLPG-YTPPGVYTLKMKMIGKNGYQLTCFSFKFKIGFG 143 (149)
Q Consensus 96 ~~G~-~~~~~~~~ip~-~~P~g~y~v~~~l~d~~~~~i~C~~~~~~i~~~ 143 (149)
.+|+ ++++..+.+|. .+|+|+|++-+++.++|++.++|+++-+.-..+
T Consensus 94 ~KGE~i~~~~~v~~pg~~~p~G~Y~vvaea~~~d~~~I~CLn~Tii~~~~ 143 (151)
T 3mtx_A 94 KKGEHLYYEGPITLGIKEIPQRDYTITARLTNEDRATVACADFTVKNYLD 143 (151)
T ss_dssp CTTCEEEEEEEEECCCSSCCCEEEEEEEEEEETTSCEEEEEEEEEEECC-
T ss_pred cCCeeEEEEEEeecCceecCCCcEEEEEEEEcCCCCEEEEeeEEEEEEec
Confidence 9998 69999999999 799999999999999999999999998865443
No 6
>3vq2_C Lymphocyte antigen 96; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_C* 2z64_C*
Probab=99.70 E-value=5.9e-16 Score=109.03 Aligned_cols=118 Identities=17% Similarity=0.263 Sum_probs=103.6
Q ss_pred ccceeecCCCCCCcEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCc-----cCCC
Q 032014 20 AIDFTYCDDEENFPLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEE-----VSCP 94 (149)
Q Consensus 20 ~~~~~~C~~~~~~~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~-----~~CP 94 (149)
.+.|++|++... ..+++++||..++|.+..+++.+.+++++.+....+.+..+++++|.-++++|.+ .-||
T Consensus 15 eV~Y~~CD~~q~----~~~isvdpC~~~~gs~~~l~~~~IpR~Dik~Ly~~~~l~~~~~~lp~~~e~iC~g~~~~ySfCg 90 (144)
T 3vq2_C 15 IISYSYCDHLKF----PISISSEPCIRLRGTNGFVHVEFIPRGNLKYLYFNLFISVNSIELPKRKEVLCHGHDDDYSFCR 90 (144)
T ss_dssp EEEEEEBTTBCC----CEEEEEESCCCTTCEEEEEEEEECCSSCCTTEEEEEEEEETTEECCCEEEESCCSSSCSSGGGG
T ss_pred EEEEEeCCCccC----CcEEeccccccccCCCcEEEEEEEEcCcceeEEEEEEEeecccccccCccCcccCCCCcceecc
Confidence 467999987541 3466999999999999999999999999998888888878889999998999986 3799
Q ss_pred CCCCc-EEEEEEEEeCCC-CCCeEEEEEEEEEeCC-CCEEEEEEEEEEEe
Q 032014 95 IEAGN-FVLSHAETLPGY-TPPGVYTLKMKMIGKN-GYQLTCFSFKFKIG 141 (149)
Q Consensus 95 l~~G~-~~~~~~~~ip~~-~P~g~y~v~~~l~d~~-~~~i~C~~~~~~i~ 141 (149)
..+|+ +.|+..+.+|.+ +|.|+|++.+++.++| .+.++|++|-+...
T Consensus 91 ~~KGE~i~~~~~~~~~~~~fpkG~Y~~v~e~~~gd~~~~l~ClnfTii~~ 140 (144)
T 3vq2_C 91 ALKGETVNTSIPFSFEGILFPKGHYRCVAEAIAGDTEEKLFCLNFTIIHR 140 (144)
T ss_dssp CCTTCCEEEEEEEEECCCCCCSSEEEEEEEEEETTTTEEEEEEEEEEEC-
T ss_pred cccCcEEEEEEEeecCcEEccCCcEEEEEEEecCCcccEEEEeeEEEEEe
Confidence 99997 999999999998 9999999999999988 77899999987544
No 7
>2e56_A Lymphocyte antigen 96; innate immunity, lipid-binding, lipid binding protein; HET: NAG MYR; 2.00A {Homo sapiens} PDB: 2e59_A* 3fxi_C* 3ula_B* 2z65_C*
Probab=99.30 E-value=1.4e-10 Score=80.69 Aligned_cols=118 Identities=18% Similarity=0.292 Sum_probs=102.0
Q ss_pred cceeecCCCCCCcEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCc-----cCCCC
Q 032014 21 IDFTYCDDEENFPLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEE-----VSCPI 95 (149)
Q Consensus 21 ~~~~~C~~~~~~~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~-----~~CPl 95 (149)
+.|+.|++-. . --+++++||.-.+|.+..+++.+.+++++.....++.+...++.+|...+-+|.+ .-|--
T Consensus 16 i~Y~sCD~~q-~---~~sin~~pC~~~~~~~~~l~~~~IpR~Dik~Ly~nl~l~~~~~~~~~~ke~iC~g~dd~ySFC~~ 91 (144)
T 2e56_A 16 ISYTYCDKMQ-Y---PISINVNPCIELKGSKGLLHIFYIPRRDLKQLYFNLYITVNTMNLPKRKEVICRGSDDDYSFCRA 91 (144)
T ss_dssp EEEEECSSCC-S---CCEEEEESCCCTTCEEEEEEEEECCSSCCTTCEEEEEEEETTEECCCEEEECSCSSSSSCGGGGC
T ss_pred EEEeecCccc-C---CcEeccchhhhhccCceEEEEEEEEhhHHHHHhhhheeeeccccccccccccccCCCCCceeecc
Confidence 5699998753 1 2478899999999999999999999999999999999999999999988999986 36999
Q ss_pred CCCc-EEEEEEEEeCC-CCCCeEEEEEEEEEeCCC-CEEEEEEEEEEEec
Q 032014 96 EAGN-FVLSHAETLPG-YTPPGVYTLKMKMIGKNG-YQLTCFSFKFKIGF 142 (149)
Q Consensus 96 ~~G~-~~~~~~~~ip~-~~P~g~y~v~~~l~d~~~-~~i~C~~~~~~i~~ 142 (149)
.+|+ ..++..+..+. .+|.|.|++.+++.+++. +.++|++|-+--..
T Consensus 92 lKGEti~t~~p~s~~g~~fpkG~Y~~~~ea~~~~~e~~l~ClNfTii~~~ 141 (144)
T 2e56_A 92 LKGETVNTTISFSFKGIKFSKGKYKCVVEAISGSPEEMLFCLEFVILHQP 141 (144)
T ss_dssp CTTCCEEEEEEEEECCCTTCCSEEEEEEEEEETTTTEEEEEEEEEEEECT
T ss_pred ccCceEEEeeecccCcEecCCCcEEEEEEEecCCchheEEEeeEEEEEcc
Confidence 9997 88888888886 489999999999998665 67999999876543
No 8
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=95.47 E-value=0.16 Score=36.56 Aligned_cols=93 Identities=14% Similarity=0.104 Sum_probs=61.0
Q ss_pred cEEEeEEEEec------CCCCCCCcEEEEEEEEEeeEecCcEEEEEEEE-ceEEEccCCc-CCCCccCCC-CCCCc-EEE
Q 032014 33 PLKVQQIKIIP------DPVVTGKPAIFNISAVTDRSVSGGKVMIEVRY-FGIRVHSETH-DICEEVSCP-IEAGN-FVL 102 (149)
Q Consensus 33 ~~~i~~v~i~P------~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~-~~~~~~~~~~-d~C~~~~CP-l~~G~-~~~ 102 (149)
.++|.++.+.- ..+..|+++++++.+.+.+++....+-+.++- .|..+...+. ..-....=+ +.+|+ +..
T Consensus 47 ~a~I~~v~l~d~~G~~~~~~~~Ge~v~l~i~~~~~~~i~~~v~G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v 126 (188)
T 2r5o_A 47 GAKIIDYHIQSAGVDFPPSLTGNQQTDFLMKVVFEYDFDCVVPGILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVF 126 (188)
T ss_dssp SEEEEEEEEEETTEESCSSEETTCEEEEEEEEEESSCEEEEEEEEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEE
T ss_pred cEEEEEEEEEECCCCEeeEEeCCCEEEEEEEEEECCcCCccEEEEEEECCCCCEEEecCcccccccccccccCCCCEEEE
Confidence 67899998863 23678999999999999988876655444433 2444443221 110110001 47897 466
Q ss_pred EEEEEeCCCCCCeEEEEEEEEEeCC
Q 032014 103 SHAETLPGYTPPGVYTLKMKMIGKN 127 (149)
Q Consensus 103 ~~~~~ip~~~P~g~y~v~~~l~d~~ 127 (149)
.+.+++ .+.+|.|.+.+.+.+.+
T Consensus 127 ~f~f~l--~L~~G~Y~lsv~i~~~~ 149 (188)
T 2r5o_A 127 KFSLPV--DLNSGDYLLSFGISAGN 149 (188)
T ss_dssp EEEEEC--CBCSEEEEEEEEEEEEE
T ss_pred EEEEec--ccCCCeEEEEEEEecCC
Confidence 666664 48889999999998755
No 9
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=94.75 E-value=0.31 Score=33.27 Aligned_cols=82 Identities=22% Similarity=0.263 Sum_probs=56.0
Q ss_pred cEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCccCCCCCCCc-EEEEEEEEeCCC
Q 032014 33 PLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEEVSCPIEAGN-FVLSHAETLPGY 111 (149)
Q Consensus 33 ~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~~~~ip~~ 111 (149)
.+.+ +++ .|..+++|+.++++++..-..........|.++.+|-.+-.. .-.|.+|+ -++++++. |
T Consensus 18 DL~V-~is-~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvng~~v~t~--------~v~La~G~s~tv~f~~~-~-- 84 (127)
T 3idu_A 18 DLTV-EIK-GPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYINGTLYKNW--------TVSLGPKEEKVLTFNWT-P-- 84 (127)
T ss_dssp CEEE-EEE-SCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEETTEEEEEE--------EEEECTTCEEEEEEEEC-C--
T ss_pred CeEE-Eec-CCCcccCCCEEEEEEEEEECCCCccCCcEEEEEECCEEEeeE--------EeccCCCCeEEEEEEEE-c--
Confidence 3455 665 688889999999999887666655566778877777543221 12489996 55555554 3
Q ss_pred CCCeEEEEEEEEEeCCC
Q 032014 112 TPPGVYTLKMKMIGKNG 128 (149)
Q Consensus 112 ~P~g~y~v~~~l~d~~~ 128 (149)
...|.|++++.. |.++
T Consensus 85 ~~~G~~~v~AvV-D~~n 100 (127)
T 3idu_A 85 TQEGMYRINATV-DEEN 100 (127)
T ss_dssp SSCEEEEEEEEE-STTC
T ss_pred CCCcEEEEEEEE-cCCC
Confidence 248999999986 4443
No 10
>1kmt_A RHO GDP-dissociation inhibitor 1; immunoglobulin fold, beta sandwich motif, isoprenyl-binding, protein binding; 1.30A {Homo sapiens} SCOP: b.1.18.8 PDB: 2jhu_A 2jhv_A 2jhw_A 1ft3_A 1ft0_A 1qvy_A 2jhz_A 2bxw_A 2jhx_A 2jhy_A 1rho_A 1fso_A 2ji0_A 2jhs_A* 2jht_A 1ajw_A 1gdf_A
Probab=94.50 E-value=0.24 Score=34.51 Aligned_cols=95 Identities=15% Similarity=0.245 Sum_probs=61.6
Q ss_pred CCCCCcEEEEEEEEEeeEecCc-EEEEEEEEceEEEccCCcCCCCccCCCCCCCcEEEEEEE-EeCC-CCCCeEEEEEEE
Q 032014 46 VVTGKPAIFNISAVTDRSVSGG-KVMIEVRYFGIRVHSETHDICEEVSCPIEAGNFVLSHAE-TLPG-YTPPGVYTLKMK 122 (149)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~-~ip~-~~P~g~y~v~~~ 122 (149)
++-|....+.++|.+++++-+| +..-.++-.|+++-.... +-+ ...|- +..|++.+.. +.|+ .+-.|+|+++-+
T Consensus 41 iKEG~~Y~iki~F~V~~eivsGLkY~q~v~r~Gi~Vdk~~~-mlG-sy~P~-~e~y~~~~~~eeaPsG~laRG~Y~a~s~ 117 (141)
T 1kmt_A 41 LKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDY-MVG-SYGPR-AAAYEFLTPVEEAPKGMLARGSYSIKSR 117 (141)
T ss_dssp EETTCEEEEEEEEEECSSCEEEEEEEEEEEETTEEEEEEEE-EEE-EECCC-SSCEEEECCCEECCCSTTTCEEEEEEEE
T ss_pred ccCCcEEEEEEEEEEccccccCcEEEEEEEECCEEECcceE-eee-ccCCC-CCcceecCCCccCCceeEEeeeeeeeEE
Confidence 4678889999999999887776 444445567776633221 111 12232 1236654432 4554 456699999999
Q ss_pred EEeCCCCEEEEEEEEEEEecc
Q 032014 123 MIGKNGYQLTCFSFKFKIGFG 143 (149)
Q Consensus 123 l~d~~~~~i~C~~~~~~i~~~ 143 (149)
+.|+|++...=++-.|+|..+
T Consensus 118 F~DDD~~~hl~~~w~feI~Kd 138 (141)
T 1kmt_A 118 FTDDDKTDHLSWEWNLTIKKD 138 (141)
T ss_dssp EECTTCCCSEEEEEEEEEESC
T ss_pred EEcCCCcEEEEEEEeEEEecC
Confidence 999888776667777777654
No 11
>1doa_B RHO GDI 1, protein (GDP-dissociation inhibitor 1); GTP-binding protein, CDC42, cell cycle; HET: GDP GER; 2.60A {Bos taurus} SCOP: b.1.18.8 PDB: 1hh4_D* 1cc0_E*
Probab=93.90 E-value=0.17 Score=37.73 Aligned_cols=94 Identities=14% Similarity=0.226 Sum_probs=60.9
Q ss_pred CCCCcEEEEEEEEEeeEecCc-EEEEEEEEceEEEccCCcCCCCccCCCCCCCcEEEEEEE-EeCC-CCCCeEEEEEEEE
Q 032014 47 VTGKPAIFNISAVTDRSVSGG-KVMIEVRYFGIRVHSETHDICEEVSCPIEAGNFVLSHAE-TLPG-YTPPGVYTLKMKM 123 (149)
Q Consensus 47 ~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~-~ip~-~~P~g~y~v~~~l 123 (149)
+-|....+.++|.+++++-+| +..-.++-.|+++-.... +.+ ...|-. -.|++.+.. ..|+ ++-.|+|+++-++
T Consensus 120 KEGs~Y~lki~FkV~~eIVsGLkY~q~VkR~GI~Vdk~~~-MlG-SY~P~~-e~y~~~~p~EeAPSGmLARG~Y~akSkF 196 (219)
T 1doa_B 120 KEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDY-MVG-SYGPRA-EEYEFLTPMEEAPKGMLARGSYNIKSRF 196 (219)
T ss_dssp ETTCEEEEEEEECBCSSCEEEEEEEEEEEETTEEEEEEEE-EEE-EECCCS-SCEEEECCCEECCCTTSCCSEEEEEEEE
T ss_pred cCCCEEEEEEEEEEecceecCcEEEEEEEECCeEECCcce-eee-ccCCCC-CcccccCCCccCCccceeeeeeeeeEEE
Confidence 568888899999998776666 444455667776633221 111 123322 126654432 4554 4567999999999
Q ss_pred EeCCCCEEEEEEEEEEEecc
Q 032014 124 IGKNGYQLTCFSFKFKIGFG 143 (149)
Q Consensus 124 ~d~~~~~i~C~~~~~~i~~~ 143 (149)
.|+|++...=++-.|+|..+
T Consensus 197 ~DDD~~~hL~~eWsfeI~Kd 216 (219)
T 1doa_B 197 TDDDRTDHLSWEWNLTIKKE 216 (219)
T ss_dssp ECTTCCCCEEEEEEEEEESS
T ss_pred EeCCCceEEEEEEEEEEecC
Confidence 99888876677778877754
No 12
>1ds6_B RHO GDP-dissociation inhibitor 2; beta sandwhich, protein-protein complex, G-domain, immunoglobulin fold, walker fold, GTP-binding protein; HET: GDP; 2.35A {Homo sapiens} SCOP: b.1.18.8 PDB: 1fst_A
Probab=93.67 E-value=0.28 Score=35.54 Aligned_cols=94 Identities=15% Similarity=0.199 Sum_probs=60.9
Q ss_pred CCCCcEEEEEEEEEeeEecCc-EEEEEEEEceEEEccCCcCCCCccCCCCCCCcEEEEEEE-EeCC-CCCCeEEEEEEEE
Q 032014 47 VTGKPAIFNISAVTDRSVSGG-KVMIEVRYFGIRVHSETHDICEEVSCPIEAGNFVLSHAE-TLPG-YTPPGVYTLKMKM 123 (149)
Q Consensus 47 ~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~-~ip~-~~P~g~y~v~~~l 123 (149)
+-|....+.++|.+++++-+| ...-.++-.|+++-.... +.+ ...|-. ..|++.+.. +.|+ ++-.|+|+++-++
T Consensus 81 KEGs~Y~iki~F~V~~eivsGLkY~q~v~r~Gi~Vdk~~~-mlG-sy~P~~-e~y~~~~p~eeaPsG~laRG~Y~a~skF 157 (180)
T 1ds6_B 81 KEGSEYRVKIHFKVNRDIVSGLKYVQHTYRTGVKVDKATF-MVG-SYGPRP-EEYEFLTPVEEAPKGMLARGTYHNKSFF 157 (180)
T ss_dssp ETTCEEEEEEEECCCSSCEEEEEEEEEEEETTEEEEEEEE-EEE-EECCCS-SCEEEECCCEECCCSTTTCEEEEEEEEE
T ss_pred cCCcEEEEEEEEEEecccccCcEEEEEEEECCEEECCceE-eee-ccCCCC-CceeecCCCccCCcceeeeeeeeeeEEE
Confidence 568888899999998777676 444455567776633211 111 122321 236665443 4554 4667999999999
Q ss_pred EeCCCCEEEEEEEEEEEecc
Q 032014 124 IGKNGYQLTCFSFKFKIGFG 143 (149)
Q Consensus 124 ~d~~~~~i~C~~~~~~i~~~ 143 (149)
.|+|+....=++-.|+|..+
T Consensus 158 ~DDD~~~hl~~~wsfeI~Kd 177 (180)
T 1ds6_B 158 TDDDKQDHLSWEWNLSIKKE 177 (180)
T ss_dssp ECTTCCCCEEEEEEEEEESS
T ss_pred EcCCCceEEEEEEEEEEeeC
Confidence 99888877677777877754
No 13
>2vtc_A CEL61B, cellulase; hydrolase, glycoside; HET: NAG; 1.6A {Hypocrea jecorina}
Probab=92.54 E-value=0.39 Score=36.45 Aligned_cols=38 Identities=21% Similarity=0.481 Sum_probs=30.7
Q ss_pred EEEEEeCCCCCCeEEEEEEEEE-----eC-CCCE--EEEEEEEEEE
Q 032014 103 SHAETLPGYTPPGVYTLKMKMI-----GK-NGYQ--LTCFSFKFKI 140 (149)
Q Consensus 103 ~~~~~ip~~~P~g~y~v~~~l~-----d~-~~~~--i~C~~~~~~i 140 (149)
++++.||+.+|+|+|-+|+++. ++ .|.+ +.|+.+.+.=
T Consensus 160 ~~~~tIP~~l~~G~YLlR~E~iALH~a~~~ggaQfY~~Caqi~VtG 205 (249)
T 2vtc_A 160 KWTVKIPSSLRPGNYVFRHELLAAHGASSANGMQNYPQCVNIAVTG 205 (249)
T ss_dssp EEEEECCTTBCSEEEEEEEEEEECTTTTSTTCCEEEEEEEEEEEES
T ss_pred eeEEEcCCCCCCcceEEEEEeeeccccccCCCceechhhEEEEEcc
Confidence 5678999999999999999988 33 3456 6999998763
No 14
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=91.97 E-value=0.46 Score=31.15 Aligned_cols=27 Identities=11% Similarity=0.224 Sum_probs=22.3
Q ss_pred EEEEeCCCCCCeEEEEEEEEEeCCCCEE
Q 032014 104 HAETLPGYTPPGVYTLKMKMIGKNGYQL 131 (149)
Q Consensus 104 ~~~~ip~~~P~g~y~v~~~l~d~~~~~i 131 (149)
+.+.++ .+++|.|+|+|+....||..+
T Consensus 69 ~~~~l~-~L~~G~YtV~WrvvS~DGH~~ 95 (104)
T 1lyq_A 69 VIIPRE-PLPAGTYRVDWRAVSSDTHPI 95 (104)
T ss_dssp EEEESS-CCCSEEEEEEEEECCTTSCCE
T ss_pred EEEECC-CCCCceEEEEEEEEecCCCcc
Confidence 445566 678999999999999998875
No 15
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=91.86 E-value=1.2 Score=30.26 Aligned_cols=50 Identities=18% Similarity=0.266 Sum_probs=36.8
Q ss_pred CCCC-CCCc-EEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEEEEEEEEEEEecc
Q 032014 92 SCPI-EAGN-FVLSHAETLPGYTPPGVYTLKMKMIGKNGYQLTCFSFKFKIGFG 143 (149)
Q Consensus 92 ~CPl-~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i~C~~~~~~i~~~ 143 (149)
.-|+ +||+ |+|+.--.++ .|.|......++.+++|+.+-+.--.|.+..+
T Consensus 72 ~qP~L~PGe~f~YtSg~~L~--tp~G~M~G~y~m~~~~G~~F~v~Ip~F~L~~P 123 (127)
T 2f1e_A 72 EQPWLRPGEAFHYTSGVLLE--TEQGQMQGHYDMVADDGTEFIAPIAAFVLSVP 123 (127)
T ss_dssp BCCEECTTCEEEEEEEEEES--SSCEEEEEEEEEEETTCCEEEEEEEEEEEC--
T ss_pred CCCcCCCCCceEEeCCcCcC--CCcEEEEEEEEEEECCCCEEEEECCceEcCCC
Confidence 4555 8997 8887777776 57899999999999999977665556666543
No 16
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=91.63 E-value=0.55 Score=30.65 Aligned_cols=27 Identities=7% Similarity=0.281 Sum_probs=22.0
Q ss_pred EEEEeCCCCCCeEEEEEEEEEeCCCCEE
Q 032014 104 HAETLPGYTPPGVYTLKMKMIGKNGYQL 131 (149)
Q Consensus 104 ~~~~ip~~~P~g~y~v~~~l~d~~~~~i 131 (149)
+.+.++ .+++|.|+|.|+....||..+
T Consensus 67 ~~~~l~-~L~~G~YtV~WrvvS~DGH~~ 93 (102)
T 2c9r_A 67 VITPAS-PLTAGTYKVDWRAVSSDTFPI 93 (102)
T ss_dssp EEEESS-CCCSEEEEEEEEECCTTCCCE
T ss_pred EEEECC-CCCCceEEEEEEEEecCCCcc
Confidence 444565 678999999999999998876
No 17
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=91.42 E-value=1.2 Score=30.28 Aligned_cols=50 Identities=26% Similarity=0.359 Sum_probs=37.4
Q ss_pred CCCC-CCCc-EEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEEEEEEEEEEEecc
Q 032014 92 SCPI-EAGN-FVLSHAETLPGYTPPGVYTLKMKMIGKNGYQLTCFSFKFKIGFG 143 (149)
Q Consensus 92 ~CPl-~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i~C~~~~~~i~~~ 143 (149)
.-|+ .||+ |+|+.-..++ .|.|......++.+++|+.+-+.--.|.+..+
T Consensus 71 ~qP~L~PGe~f~YtSg~~L~--tp~G~M~G~y~m~~~~G~~F~v~Ip~F~L~~P 122 (126)
T 1xvs_A 71 EQPRIKANDEYTYSSGTALD--TPVGVMQGQYLMIDEQGESFTVEIEPFRLAVP 122 (126)
T ss_dssp BCCEECTTCEEEEEEEEEES--SSEEEEEEEEEEECTTSCEEEEEEEEEEEECC
T ss_pred CCCcCCCCCceEEeCCcCcC--CCcEEEEEEEEEEECCCCEEEEECCceEcCCc
Confidence 4555 8997 7877777776 57899999999999999877665556666544
No 18
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=91.34 E-value=1.3 Score=30.47 Aligned_cols=49 Identities=16% Similarity=0.331 Sum_probs=37.3
Q ss_pred CCCC-CCCc-EEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEEEEEEEEEEEec
Q 032014 92 SCPI-EAGN-FVLSHAETLPGYTPPGVYTLKMKMIGKNGYQLTCFSFKFKIGF 142 (149)
Q Consensus 92 ~CPl-~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i~C~~~~~~i~~ 142 (149)
.-|+ .||+ |+|+.-..++ .|.|.....+++.+++|+.+-+.--.|.+..
T Consensus 71 eqP~L~PGe~F~YtSg~~L~--Tp~G~M~G~y~m~~~~G~~F~v~Ip~F~L~~ 121 (134)
T 1tza_A 71 ETPTIPPNTAYQYTSGTVLD--TPFGIMYGTYGMVSESGEHFNAIIKPFRLAT 121 (134)
T ss_dssp BCCEECTTEEEEEEEEEEES--SSEEEEEEEEEEEETTCCEEEEEEEEEEEEC
T ss_pred CCCcCCCCCceEEcCCcCcC--CCceEEEEEEEEEECCCCEEEEECCCeEccC
Confidence 4565 8997 7777777776 5789999999999999998766655666654
No 19
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=91.21 E-value=1.3 Score=30.63 Aligned_cols=50 Identities=24% Similarity=0.430 Sum_probs=38.1
Q ss_pred CCCC-CCCc-EEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEEEEEEEEEEEecc
Q 032014 92 SCPI-EAGN-FVLSHAETLPGYTPPGVYTLKMKMIGKNGYQLTCFSFKFKIGFG 143 (149)
Q Consensus 92 ~CPl-~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i~C~~~~~~i~~~ 143 (149)
.-|+ +||+ |+|+.-..++ .|.|.....+++.+++|+.+-+.--.|.+..+
T Consensus 76 eqPvL~PGe~F~YtSg~~L~--Tp~G~M~G~y~m~~~~G~~F~v~Ip~F~L~~P 127 (139)
T 1xq4_A 76 QQPLLAPGETFEYTSGCPLP--TPIGTMRGTYHCVGENGIPFEVPIAEFLLAMP 127 (139)
T ss_dssp CCCEECTTCEEEEEEEEEES--SSEEEEEEEEEEEETTSCEEEEEEEEEEEECT
T ss_pred CCCcCCCCCceEEcCCcCcC--CCceEEEEEEEEEeCCCCEEEEECCCeEcCCC
Confidence 4665 8997 7777777776 57899999999999999987666656666554
No 20
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=89.74 E-value=3.2 Score=27.62 Aligned_cols=83 Identities=17% Similarity=0.157 Sum_probs=53.6
Q ss_pred EEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCccCCCCCCCc-EEEEEEEEeCCCC
Q 032014 34 LKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEEVSCPIEAGN-FVLSHAETLPGYT 112 (149)
Q Consensus 34 ~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~~~~ip~~~ 112 (149)
+.++++ +|-.+..|+.++|++...-.....++...+.++.+|-.+-..... -+.+|. -+..+++. ...
T Consensus 5 L~vt~i--tP~~~~~~~~~ti~atVkN~G~~~a~~~~V~ly~~g~~v~t~~v~-------~LaaG~s~tv~~~w~--~~~ 73 (114)
T 2l0d_A 5 LVPVSL--TPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVT-------SLESENSTNVDFHWT--LDG 73 (114)
T ss_dssp EEEEEE--ECSEECTTSEEEEEEEEEECSSSCBCCEEEEEEETTEEEEEEEES-------CBCBTCEEEEEEEEE--CCC
T ss_pred cEEEec--cCCCcCCCCeEEEEEEEEECCCCCCCCEEEEEEECCEEEcceecc-------cccCCCEEEEEEEEe--ecC
Confidence 567776 576688999999999887666666677788887777544322111 157785 34444322 221
Q ss_pred CCeEEEEEEEEEeCCC
Q 032014 113 PPGVYTLKMKMIGKNG 128 (149)
Q Consensus 113 P~g~y~v~~~l~d~~~ 128 (149)
..|.|++++.. |.++
T Consensus 74 ~~G~ytl~a~V-D~~n 88 (114)
T 2l0d_A 74 TANSYTLTVNV-DPEN 88 (114)
T ss_dssp SCSEEEEEEEE-CTTC
T ss_pred cCceEEEEEEE-CCCC
Confidence 36999999986 5443
No 21
>3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A*
Probab=89.02 E-value=1.6 Score=32.26 Aligned_cols=38 Identities=29% Similarity=0.512 Sum_probs=30.4
Q ss_pred EEEEEEeCCCCCCeEEEEEEEEEeC------CCCE--EEEEEEEEE
Q 032014 102 LSHAETLPGYTPPGVYTLKMKMIGK------NGYQ--LTCFSFKFK 139 (149)
Q Consensus 102 ~~~~~~ip~~~P~g~y~v~~~l~d~------~~~~--i~C~~~~~~ 139 (149)
.+.++.||+.+|+|.|-+|.++..= .|.+ +.|+.+.+.
T Consensus 117 ~~~~~~iP~~l~~G~YllR~E~ialh~a~~~~~~qfY~~Caqi~Vt 162 (208)
T 3eja_A 117 SSFAVPIPPCIKSGYYLLRAEQIGLHVAQSVGGAQFYISCAQLSVT 162 (208)
T ss_dssp CEEEEECCSSBCSEEEEEEEEEEECTTTTSTTCCEEEEEEEEEEEE
T ss_pred CceEEeccCCCCCcceEEEeeeeeecccccCCCCcccccceEEEEe
Confidence 4567899999999999999987751 2456 599999876
No 22
>4eir_A Polysaccharide monooxygenase-2; GH61, PMO, cellulase, biofuels copper monooxygenase, peroxide, superoxide, CBP21, beta-SAN fold, secreted; HET: HIC NAG GOL; 1.10A {Neurospora crassa}
Probab=88.26 E-value=2 Score=32.02 Aligned_cols=38 Identities=29% Similarity=0.538 Sum_probs=29.9
Q ss_pred EEEEEeCCCCCCeEEEEEEEEEeC------CCCE--EEEEEEEEEE
Q 032014 103 SHAETLPGYTPPGVYTLKMKMIGK------NGYQ--LTCFSFKFKI 140 (149)
Q Consensus 103 ~~~~~ip~~~P~g~y~v~~~l~d~------~~~~--i~C~~~~~~i 140 (149)
+.++.||+.+|+|.|-+|.++.-= .|.+ +.|+.+.+.=
T Consensus 133 ~~~~~iP~~l~~G~YllR~E~Ialh~a~~~g~~qfY~~Caqi~VtG 178 (223)
T 4eir_A 133 RHSIKIPECIAPGQYLLRAEMIALHAASNYPGAQFYMECAQLNVVG 178 (223)
T ss_dssp EEEEECCTTSCCEEEEEEEEEEECTTCSSSSCCEEEEEEEEEEEES
T ss_pred eEEEECCCCCCCCceEEEEeeeeccccccCCCCcccccceEEEEeC
Confidence 456799999999999999987751 2456 5999998763
No 23
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=87.47 E-value=0.44 Score=32.33 Aligned_cols=86 Identities=7% Similarity=-0.033 Sum_probs=53.6
Q ss_pred EEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCc-cCCCCCCCc-EEEEEEEEeCCCC----
Q 032014 39 IKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEE-VSCPIEAGN-FVLSHAETLPGYT---- 112 (149)
Q Consensus 39 v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~-~~CPl~~G~-~~~~~~~~ip~~~---- 112 (149)
++.+|-.+..|+.++|++...-.....++...|.+++++ |......=+. .-=+|.+|. -+.++++.++...
T Consensus 5 is~sP~~p~~g~~vTvsatVkN~Gt~~s~a~~V~~yl~~---p~~gg~~vgt~tv~~LaaG~s~t~~v~~~~~~~~~~~a 81 (122)
T 2kut_A 5 ITLSKETPFEGEEITVSARVTNRGAAEAHNVPVAVYLGN---PAQGGVEIGRDTISRIPVGGTGLARVQWKATRKLAGRA 81 (122)
T ss_dssp EECCTTSCCTTCEEEEEEEEECCSSSCBCCCCEEECSSC---TTTCCCCCBCCCCSCBCTTCEEECCEEEECCCCCSSCC
T ss_pred eecCCCCCCCCCeEEEEEEEEeCCCcccCcEEEEEEeCC---CccCCeEEeeEEccccCCCCeEEEEEEEecCCcccccc
Confidence 567788889999999999876555555555556665555 1100000000 123689996 6666777777431
Q ss_pred CCeEEEEEEEEEeCCC
Q 032014 113 PPGVYTLKMKMIGKNG 128 (149)
Q Consensus 113 P~g~y~v~~~l~d~~~ 128 (149)
-.|.|.+++.. |.++
T Consensus 82 ~~Gsy~v~AvV-D~~n 96 (122)
T 2kut_A 82 ANPGVPVYAVV-DPDN 96 (122)
T ss_dssp SCCCCCCCEEE-CCTT
T ss_pred cCceEEEEEEE-cCCC
Confidence 23999999986 5444
No 24
>4eis_A Polysaccharide monooxygenase-3; GH61, PMO, cellulase, biofuels, CBM33, copper monooxygenase, peroxide, superoxide, CBP21, beta-sandwich fold; HET: HIC DAH NAG; 1.37A {Neurospora crassa} PDB: 4eis_B*
Probab=86.18 E-value=2.9 Score=31.21 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=29.7
Q ss_pred EEEEEeCCCCCCeEEEEEEEEEeC------CCCE--EEEEEEEEE
Q 032014 103 SHAETLPGYTPPGVYTLKMKMIGK------NGYQ--LTCFSFKFK 139 (149)
Q Consensus 103 ~~~~~ip~~~P~g~y~v~~~l~d~------~~~~--i~C~~~~~~ 139 (149)
+.++.||+.+|+|+|-+|.++.-= .|.+ +.|+.+.+.
T Consensus 136 ~~~~~IP~~l~~G~YllR~E~IALH~a~~~ggaQfY~~Caqi~Vt 180 (225)
T 4eis_A 136 NYEYAIPSCLKPGYYLVRHEIIALHSAYSYPGAQFYPGCHQLQVT 180 (225)
T ss_dssp EEEEECCTTBCSEEEEEEEEEEECTTCSSSSCCEEEEEEEEEEEE
T ss_pred ceeEeccCCCCCcceEEEEeeccccccccCCCCcccccCeEEEEe
Confidence 467899999999999999987642 2446 599999876
No 25
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=84.84 E-value=1.2 Score=37.04 Aligned_cols=15 Identities=33% Similarity=0.687 Sum_probs=11.9
Q ss_pred cCCCCCCCc-EEEEEE
Q 032014 91 VSCPIEAGN-FVLSHA 105 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~ 105 (149)
+.||+.||+ |+|++.
T Consensus 104 tq~~I~PG~s~~Y~f~ 119 (521)
T 1v10_A 104 NQCPIIPNESFVYDFV 119 (521)
T ss_dssp TBCCBCTTEEEEEEEE
T ss_pred eeCCcCCCCeEEEEEe
Confidence 589999997 676665
No 26
>3zud_A GH61 isozyme A; hydrolase, degradation of recalcitrant biomass; HET: HIC NAG TAM; 1.25A {Thermoascus aurantiacus} PDB: 2yet_A*
Probab=83.32 E-value=3.9 Score=30.56 Aligned_cols=37 Identities=30% Similarity=0.587 Sum_probs=29.6
Q ss_pred EEEEEeCCCCCCeEEEEEEEEEeC------CCCE--EEEEEEEEE
Q 032014 103 SHAETLPGYTPPGVYTLKMKMIGK------NGYQ--LTCFSFKFK 139 (149)
Q Consensus 103 ~~~~~ip~~~P~g~y~v~~~l~d~------~~~~--i~C~~~~~~ 139 (149)
+.++.||+.+|+|.|-+|.++.-= .|.+ +.|+.+.|.
T Consensus 140 ~~~~~IP~~l~~G~YllR~E~IALH~a~~~ggaQfY~~Caqi~Vt 184 (228)
T 3zud_A 140 SWTVTIPTTIAPGNYVLRHEIIALHSAQNQDGAQNYPQCINLQVT 184 (228)
T ss_dssp EEEEECCSSBCCEEEEEEEEEEECTTTTSTTCCEEEEEEEEEEEC
T ss_pred ccceeccCCCCCCceEEEeeeccccccccCCCCcccccceEEEEe
Confidence 567899999999999999997642 2445 599998875
No 27
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=81.98 E-value=1.8 Score=29.20 Aligned_cols=39 Identities=10% Similarity=0.184 Sum_probs=31.9
Q ss_pred cCCCCccCCCCCCCc-EEEEEEEEeCCCCCCeEEEEEEEE
Q 032014 85 HDICEEVSCPIEAGN-FVLSHAETLPGYTPPGVYTLKMKM 123 (149)
Q Consensus 85 ~d~C~~~~CPl~~G~-~~~~~~~~ip~~~P~g~y~v~~~l 123 (149)
-+.|...+|++..|+ ++++..+.-+...-.++..+.+++
T Consensus 20 V~~C~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~ 59 (130)
T 1nep_A 20 VSPCPTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIV 59 (130)
T ss_dssp EESCSSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEE
T ss_pred ECCCCCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEE
Confidence 356888899999997 888888888887778888887765
No 28
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=81.80 E-value=1.9 Score=29.04 Aligned_cols=39 Identities=23% Similarity=0.307 Sum_probs=32.0
Q ss_pred cCCC-CccCCCCCCCc-EEEEEEEEeCCCCCCeEEEEEEEE
Q 032014 85 HDIC-EEVSCPIEAGN-FVLSHAETLPGYTPPGVYTLKMKM 123 (149)
Q Consensus 85 ~d~C-~~~~CPl~~G~-~~~~~~~~ip~~~P~g~y~v~~~l 123 (149)
-+.| ...+|++..|+ ++++..+.-+...-.++..+.+++
T Consensus 18 V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~ 58 (129)
T 1xwv_A 18 VDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASL 58 (129)
T ss_dssp ETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEE
T ss_pred ECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEE
Confidence 3678 78899999997 888888877777778888888776
No 29
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=80.98 E-value=2.6 Score=28.33 Aligned_cols=78 Identities=17% Similarity=0.220 Sum_probs=44.9
Q ss_pred CCCcEEEEEEEEE------eeEecCcE-EEEEEEE-ceEEEccCCcCCCCc---cCCCCCCCcEEEEEEEEeCCCCCCeE
Q 032014 48 TGKPAIFNISAVT------DRSVSGGK-VMIEVRY-FGIRVHSETHDICEE---VSCPIEAGNFVLSHAETLPGYTPPGV 116 (149)
Q Consensus 48 ~G~~~~i~~~~~~------~~~i~~~~-~~v~~~~-~~~~~~~~~~d~C~~---~~CPl~~G~~~~~~~~~ip~~~P~g~ 116 (149)
+|+.+.+.+..+- .-...+|. .++.+.- .|-.+..-+.+.|=- ..=-++||+ +..++..+|...++|.
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE-~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGE-TYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTC-EEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCC-EEEEEEEeCCCCCCcc
Confidence 6666666665541 11233442 4555543 344555445555631 122378997 3444455556677899
Q ss_pred EEEEEEEEeC
Q 032014 117 YTLKMKMIGK 126 (149)
Q Consensus 117 y~v~~~l~d~ 126 (149)
|++++.+..+
T Consensus 95 Ytl~a~l~~~ 104 (120)
T 3isy_A 95 YEVKVTFKGR 104 (120)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEEEee
Confidence 9999999854
No 30
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=77.92 E-value=16 Score=29.42 Aligned_cols=82 Identities=11% Similarity=0.132 Sum_probs=46.7
Q ss_pred EeEEE-EecCCCCCCCcEEEEEEEEEe-----eEecCcEEEEEEEEceEEEccCCcCCCCccCCCC---------CCCcE
Q 032014 36 VQQIK-IIPDPVVTGKPAIFNISAVTD-----RSVSGGKVMIEVRYFGIRVHSETHDICEEVSCPI---------EAGNF 100 (149)
Q Consensus 36 i~~v~-i~P~p~~~G~~~~i~~~~~~~-----~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl---------~~G~~ 100 (149)
|+++- ++|.- .+|+.+.+++..+++ .++-..+..-++...-..+.... +. -++ ++|.|
T Consensus 36 vdGvV~vd~~~-lk~rkv~~~l~~~fryGred~~v~Gl~f~kel~~~~~qv~p~~-~~-----~~~t~lQe~Ll~~~G~h 108 (392)
T 1suj_A 36 VDGVVLIDPEY-LKDRKVFVTLTCAFRYGRDDLDLIGMSFRKDLYSLATQVYPPE-TK-----EPLTPLQEKLMKKLGAH 108 (392)
T ss_dssp EEEEEEECTTT-SSSCEEEEEEEEEEEEECCSSCCSSCEEEEEEEEEEEEEESCC-SC-----CCCCHHHHHHHHHHCSS
T ss_pred eeeEEEEcHHH-hccceEEEEEEEeeccCCCchhcCcceEEEEEEEEEEEEeCCC-CC-----ccccHHHHHhhhcccCe
Confidence 45444 45544 788988888774332 22322233223322222222211 11 123 58999
Q ss_pred EEEEEEEeCCCCCC----------------eEEEEEEEEE
Q 032014 101 VLSHAETLPGYTPP----------------GVYTLKMKMI 124 (149)
Q Consensus 101 ~~~~~~~ip~~~P~----------------g~y~v~~~l~ 124 (149)
.|.+++.||...|+ .+|.+++.+-
T Consensus 109 ~fPFsFqLP~~lPsSf~lqp~~~~eGk~g~VrY~VKa~i~ 148 (392)
T 1suj_A 109 AYPFCFKMGTNLPCSVTLQPGPDDTGKSCGVDFEVKAFCA 148 (392)
T ss_dssp EEEEEECCCSSCCCCEEECCCTTCCSCCEEEEEEEEEEEE
T ss_pred eEeEEeeCCCCCCCeEEeccCCccCCCceeEEEEEEEEEc
Confidence 99999999987765 5788888884
No 31
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=76.79 E-value=3.2 Score=34.58 Aligned_cols=16 Identities=25% Similarity=0.632 Sum_probs=12.9
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
+.||+.||+ |+|++..
T Consensus 79 tq~~I~PG~s~tY~f~~ 95 (552)
T 1aoz_A 79 SQCAINPGETFFYNFTV 95 (552)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCCcCCCCeEEEEEEC
Confidence 579999997 7777664
No 32
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=75.34 E-value=3.3 Score=35.05 Aligned_cols=16 Identities=25% Similarity=0.673 Sum_probs=12.6
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
+.||+.||+ |+|+++.
T Consensus 143 Tq~pI~PG~sftY~f~~ 159 (580)
T 3sqr_A 143 TQCPIAPGDTLTYKFQV 159 (580)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCCCCCCCeEEEEEEC
Confidence 479999997 7776664
No 33
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=71.34 E-value=2.9 Score=28.40 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=14.5
Q ss_pred CCCeEEEEEEEEEeCCCCEE
Q 032014 112 TPPGVYTLKMKMIGKNGYQL 131 (149)
Q Consensus 112 ~P~g~y~v~~~l~d~~~~~i 131 (149)
+|+|.|+++++..|.+|+..
T Consensus 80 ~~~G~Y~~~v~a~d~~g~~~ 99 (138)
T 3c12_A 80 MAAGKYGITATQTDTAGAKS 99 (138)
T ss_dssp CCSEEEEEEEEEEETTCCEE
T ss_pred CCCceEEEEEEEEECCCCEE
Confidence 67788888888877666643
No 34
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=71.00 E-value=2 Score=33.23 Aligned_cols=55 Identities=15% Similarity=0.245 Sum_probs=32.1
Q ss_pred CCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCccCCCCCCCc-EEEEEEEEeC
Q 032014 47 VTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEEVSCPIEAGN-FVLSHAETLP 109 (149)
Q Consensus 47 ~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~~~~ip 109 (149)
..|+.+.|++.=.+++.. .+.+-|+.++. ..|.=....||+.||+ |+|+++...|
T Consensus 47 ~~Gd~v~v~~~N~l~~~~-------siH~HG~~~~~-~~dG~~~~~~~i~PG~~~~Y~~~~~~P 102 (313)
T 3tas_A 47 NEGDTLHIEFENTMDVPV-------SLHVHGLDYEI-SSDGTKQSRSDVEPGGTRTYTWRTHVP 102 (313)
T ss_dssp ETTCEEEEEEEECSSSCB-------CCEESSSBCCG-GGSCSTTTTCCBCTTCEEEEEEBCCCC
T ss_pred ECCCEEEEEEEECCCCCc-------cEeecCCcCCc-cCCCCccccCCcCCCCEEEEEEEeccC
Confidence 357777776654443321 22344544432 2343334689999997 8888877666
No 35
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=69.73 E-value=27 Score=24.80 Aligned_cols=63 Identities=14% Similarity=0.191 Sum_probs=37.5
Q ss_pred CCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCccCCCCCCCcEEEEEEEEeCCCCCCeEEEEEEEEEeCC
Q 032014 48 TGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEEVSCPIEAGNFVLSHAETLPGYTPPGVYTLKMKMIGKN 127 (149)
Q Consensus 48 ~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~P~g~y~v~~~l~d~~ 127 (149)
.|+.++|... +.. +.+..++++..+|-.+-.. ..+.|+|..+. .+.|.|+++++.+|..
T Consensus 15 ~g~~vtv~~~--As~--d~~V~~Ve~~~dg~~v~~~------------t~~~ys~~~~~-----~~~G~htlta~A~D~a 73 (190)
T 3pdd_A 15 AGKDINISAT--VKS--KTPVSKVEFYNGDTLISSD------------TTAPYTAKITG-----AAVGAYNLKAVAVLSD 73 (190)
T ss_dssp TTSCEEEEEE--ECC--SSCEEEEEEEETTEEEEEE------------CSSSEEEEECS-----CCSEEEEEEEEEEETT
T ss_pred CCCeEEEEEE--EeC--CCCEEEEEEEECCEEEccc------------cCCceEEEecc-----CCCccEEEEEEEEECC
Confidence 4555554444 431 2344577877777544221 11335554331 5789999999999988
Q ss_pred CCEE
Q 032014 128 GYQL 131 (149)
Q Consensus 128 ~~~i 131 (149)
|..-
T Consensus 74 Gn~s 77 (190)
T 3pdd_A 74 GRRI 77 (190)
T ss_dssp SCEE
T ss_pred CCEe
Confidence 8764
No 36
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=68.43 E-value=14 Score=30.44 Aligned_cols=16 Identities=38% Similarity=0.744 Sum_probs=12.1
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
+.||+.||+ |+|+++.
T Consensus 84 tq~pI~PG~sftY~f~~ 100 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNV 100 (495)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCCCCCCCeEEEEEEe
Confidence 579999997 6665554
No 37
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=68.16 E-value=3.7 Score=33.89 Aligned_cols=16 Identities=25% Similarity=0.218 Sum_probs=11.8
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
..||+.||+ |+|++..
T Consensus 121 pq~~I~PG~s~~Y~f~~ 137 (481)
T 3zx1_A 121 PHDPILAGEERIYRFEI 137 (481)
T ss_dssp TTSCBCTTCEEEEEEEC
T ss_pred ccCcCCCCCeEEEEEeC
Confidence 579999997 6655543
No 38
>1pfs_A PF3 SSDBP, PF3 single-stranded DNA binding protein; viral, bacteriophage PF3; NMR {Pseudomonas phage PF3} SCOP: b.40.4.7
Probab=67.51 E-value=15 Score=22.43 Aligned_cols=30 Identities=20% Similarity=0.284 Sum_probs=20.2
Q ss_pred EEEEEEEeCCCCCCeEEEEEEEEEeCCCCE
Q 032014 101 VLSHAETLPGYTPPGVYTLKMKMIGKNGYQ 130 (149)
Q Consensus 101 ~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~ 130 (149)
-....+.+...+|+|+|..-++..-.||..
T Consensus 37 P~~~~Fyaeev~paG~Ye~d~~~~V~dgRl 66 (78)
T 1pfs_A 37 PLQCQFFVESVIPAGSYQVPYRINVNNGRP 66 (78)
T ss_dssp CEEEEEECSSCCCSEEEEEEEEEEEETTEE
T ss_pred cceEeeeeccCCCCCceecceEeeecCCcE
Confidence 344445555778899998888776556653
No 39
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=66.58 E-value=16 Score=30.21 Aligned_cols=16 Identities=31% Similarity=0.760 Sum_probs=12.1
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
+.||+.||+ |+|+++.
T Consensus 83 tq~pI~PG~s~tY~f~~ 99 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQV 99 (499)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCCCCCCCeEEEEEEc
Confidence 589999997 6665554
No 40
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=63.38 E-value=11 Score=23.70 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=21.1
Q ss_pred CCCcEEEEEEEEeCCCCCCeEEEEEEEE
Q 032014 96 EAGNFVLSHAETLPGYTPPGVYTLKMKM 123 (149)
Q Consensus 96 ~~G~~~~~~~~~ip~~~P~g~y~v~~~l 123 (149)
..|. +..++.+|...+.|.|++++..
T Consensus 59 ~~G~--~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 59 EGGL--KQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp BTTE--EEEEEECCSSCCCEEEEEEEEC
T ss_pred CCCE--EEEEEECCCCCCCeeEEEEEEE
Confidence 3464 5678899999999999999874
No 41
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=63.37 E-value=19 Score=30.92 Aligned_cols=89 Identities=10% Similarity=0.081 Sum_probs=57.3
Q ss_pred CCCCcEEEEEEEEE-eeEecCcEEEEEEEEceEEEccCCcCCCCccCCCCCCCc-EEEEE-EEEeCCC--CCCeEEEEEE
Q 032014 47 VTGKPAIFNISAVT-DRSVSGGKVMIEVRYFGIRVHSETHDICEEVSCPIEAGN-FVLSH-AETLPGY--TPPGVYTLKM 121 (149)
Q Consensus 47 ~~G~~~~i~~~~~~-~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~-~~~ip~~--~P~g~y~v~~ 121 (149)
.+|+.+++++++.- .....+|++.+.++..+-.+-...... . +.+|+ ++.+. ++.+|.. ....-|-+++
T Consensus 19 ~PGe~V~l~~~l~n~t~~~~~gtv~~~v~hl~~~V~~~~~~~--~----l~~G~s~~~~~~~~~~P~~df~n~~GYlvev 92 (643)
T 3vmn_A 19 QAGEAVHLNLTLNNTTSLAQNITATAEVYSLENKLKTLQYTK--Y----LLPNESYTTQKGEFVIPANSLANNRGYLLKV 92 (643)
T ss_dssp CTTSCEEEECEEECCSSSCEEEEEEEEEEETTEEEEEEEEEE--E----ECTTCEEECCTTSEEECTTSSCSSEEEEEEE
T ss_pred CCCCeEEEEEEEecccCccceeEEEEEEEecccccccceEEE--E----ecCCCcceeeeeeeecCccccccCceEEEEE
Confidence 47999999988763 222346778888877766554432211 2 35675 44422 5567764 2446699999
Q ss_pred EEEeCCCCEEEEEEEEEEEe
Q 032014 122 KMIGKNGYQLTCFSFKFKIG 141 (149)
Q Consensus 122 ~l~d~~~~~i~C~~~~~~i~ 141 (149)
...|++|+.+.=....+++.
T Consensus 93 ~~~d~~g~~~~~~t~AIDVS 112 (643)
T 3vmn_A 93 NISDSQNNILEQGNRAIAVE 112 (643)
T ss_dssp EEECTTCCEEEEEEEEEEEC
T ss_pred EEEcCCCcEeeeeeEEEEec
Confidence 99999998776666666654
No 42
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=63.31 E-value=6.9 Score=30.43 Aligned_cols=16 Identities=31% Similarity=0.603 Sum_probs=12.4
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
+.||+.||+ |+|.+..
T Consensus 79 tq~~I~PG~~~~y~f~~ 95 (339)
T 2zwn_A 79 TQQPIEAGDSYTYKFKA 95 (339)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCccCCCCeEEEEEEC
Confidence 469999997 7776654
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=63.14 E-value=4 Score=31.29 Aligned_cols=18 Identities=6% Similarity=0.004 Sum_probs=13.6
Q ss_pred ccCCCCCCCc-EEEEEEEE
Q 032014 90 EVSCPIEAGN-FVLSHAET 107 (149)
Q Consensus 90 ~~~CPl~~G~-~~~~~~~~ 107 (149)
...||+.||+ |+|+++..
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~ 116 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSH 116 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCC
T ss_pred cccCccCCCCeEEEEEEee
Confidence 3579999997 77766554
No 44
>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4
Probab=61.81 E-value=29 Score=22.26 Aligned_cols=38 Identities=13% Similarity=0.244 Sum_probs=19.1
Q ss_pred CCCCCCcEEEEEEEEeCCCC-CCeEEEEEEEEEeCCCCEE
Q 032014 93 CPIEAGNFVLSHAETLPGYT-PPGVYTLKMKMIGKNGYQL 131 (149)
Q Consensus 93 CPl~~G~~~~~~~~~ip~~~-P~g~y~v~~~l~d~~~~~i 131 (149)
=|+.+|+ +++.+..+-..- -.+..+++.+..|++|+.+
T Consensus 86 ~Pv~~Gd-~l~~~~~v~~~~~~~~~v~~~~~~~n~~g~~v 124 (134)
T 1iq6_A 86 LPVFVGD-EVTAEVEVTALREDKPIATLTTRIFTQGGALA 124 (134)
T ss_dssp SCCBTTC-EEEEEEEEEEECSSSSEEEEEEEEECTTSCEE
T ss_pred CCCCCCC-EEEEEEEEEEEECCCCEEEEEEEEEeCCCCEE
Confidence 4667775 222332222111 1355666677777767654
No 45
>4ffu_A Oxidase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgrc, PS biology; HET: MSE; 1.80A {Sinorhizobium meliloti}
Probab=60.76 E-value=29 Score=24.17 Aligned_cols=50 Identities=12% Similarity=0.167 Sum_probs=27.1
Q ss_pred CCCCCCCc-EEEEEEE--EeCC-CCC-CeEEEEEEEEEeCCCCEEEEEEEEEEEe
Q 032014 92 SCPIEAGN-FVLSHAE--TLPG-YTP-PGVYTLKMKMIGKNGYQLTCFSFKFKIG 141 (149)
Q Consensus 92 ~CPl~~G~-~~~~~~~--~ip~-~~P-~g~y~v~~~l~d~~~~~i~C~~~~~~i~ 141 (149)
.=|+.+|+ .+.+.++ .-+. .-| .+..+++.+..|++|+.++=.+..+-+.
T Consensus 114 ~~PV~~GDtL~~~~~v~~~~~~~s~~~~g~v~~~~~~~nq~Ge~V~~g~~~v~v~ 168 (176)
T 4ffu_A 114 VRPVHIGDTIRTRVTIAAKEDDPKRPGAGRVVERCEVINQRGEVVLAADHILIVE 168 (176)
T ss_dssp CSCCCTTCEEEEEEEEEEEEECTTCTTEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred cCCccCCCEEEEEEEEEEEEecccCCCceEEEEEEEEEeCCCCEEEEEEEEEEEe
Confidence 45888886 4443332 1121 112 2456777777888888764444444443
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=60.75 E-value=5.6 Score=30.46 Aligned_cols=15 Identities=7% Similarity=0.209 Sum_probs=11.3
Q ss_pred CCCCCCCc-EEEEEEE
Q 032014 92 SCPIEAGN-FVLSHAE 106 (149)
Q Consensus 92 ~CPl~~G~-~~~~~~~ 106 (149)
.||+.||+ |+|.+..
T Consensus 111 ~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 111 DDAVAPGQEYTYEWII 126 (306)
T ss_dssp TTCBCTTCEEEEEEEC
T ss_pred CCccCCCCeEEEEEEe
Confidence 59999997 6665554
No 47
>3m7o_A Lymphocyte antigen 86; beta sheet, glycoprotein, immunity, inflammatory response, I immunity, secreted, immune system; HET: NAG L9R NDG; 1.65A {Mus musculus} PDB: 3t6q_C* 3b2d_C* 3rg1_C*
Probab=60.63 E-value=10 Score=26.77 Aligned_cols=30 Identities=10% Similarity=0.065 Sum_probs=25.5
Q ss_pred CCCCCCCcEEEEEEEEEee-EecCcEEEEEE
Q 032014 44 DPVVTGKPAIFNISAVTDR-SVSGGKVMIEV 73 (149)
Q Consensus 44 ~p~~~G~~~~i~~~~~~~~-~i~~~~~~v~~ 73 (149)
||.+||+.+.....++..+ .+..|+..+.+
T Consensus 112 Cp~~KGE~v~~~~~v~~p~~e~P~G~Y~v~a 142 (162)
T 3m7o_A 112 CGRRKGEQIYYAGPVNNPGLDVPQGEYQLLL 142 (162)
T ss_dssp TTCCTTCEEEEEEECCCCEEECCSEEEEEEE
T ss_pred CCcCCCeEEEEEEEeecCceecCCCcEEEEE
Confidence 8999999999999999988 69999755444
No 48
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=60.38 E-value=30 Score=22.02 Aligned_cols=67 Identities=15% Similarity=0.134 Sum_probs=39.0
Q ss_pred EEEEEEEeeEecCc-EEEEEEEEceEEEccCCcCCCCccCCCCCCCcEEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEEE
Q 032014 54 FNISAVTDRSVSGG-KVMIEVRYFGIRVHSETHDICEEVSCPIEAGNFVLSHAETLPGYTPPGVYTLKMKMIGKNGYQLT 132 (149)
Q Consensus 54 i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i~ 132 (149)
+.+.+.+... .| ..+|++..+|-.+-.. ..-+|+|..+.. .|.|+++++.+|.+|....
T Consensus 19 v~i~a~A~D~--dg~V~kVef~vdg~~vg~d------------t~apy~~~w~~~------~G~htl~a~AtD~~G~~~t 78 (98)
T 3pe9_A 19 LKITATASDS--DGKISRVDFLVDGEVIGSD------------REAPYEYEWKAV------EGNHEISVIAYDDDDAAST 78 (98)
T ss_dssp EEEEEEECCS--SSCEEEEEEEETTEEEEEE------------CSSSEEEEEECC------SEEEEEEEEEEETTCCBCC
T ss_pred EEEEEEEEeC--CCCEEEEEEEECCEEeccc------------ccCCEEEEEEcC------CccEEEEEEEEECCCCEEe
Confidence 4444444322 34 4678888887654221 112355554332 5999999999999987654
Q ss_pred EEEEEEEE
Q 032014 133 CFSFKFKI 140 (149)
Q Consensus 133 C~~~~~~i 140 (149)
=..+.+.+
T Consensus 79 S~~v~vtV 86 (98)
T 3pe9_A 79 PDSVKIFV 86 (98)
T ss_dssp CEEEEEEE
T ss_pred eeEEEEEE
Confidence 33334333
No 49
>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus} SCOP: d.38.1.4
Probab=59.83 E-value=25 Score=23.66 Aligned_cols=45 Identities=18% Similarity=0.194 Sum_probs=24.2
Q ss_pred CCCCCCCc-EEEEEEEEeCCCCC----CeEEEEEEEEEeCCCCEEEEEEEEE
Q 032014 92 SCPIEAGN-FVLSHAETLPGYTP----PGVYTLKMKMIGKNGYQLTCFSFKF 138 (149)
Q Consensus 92 ~CPl~~G~-~~~~~~~~ip~~~P----~g~y~v~~~l~d~~~~~i~C~~~~~ 138 (149)
.=|+.+|+ .+.+.++ -...+ .+..+++.++.|++|+.++=.+..+
T Consensus 104 ~~PV~~Gd~l~~~~~v--~~~~~~~~~~~~v~~~~~~~n~~g~~v~~~~~~~ 153 (161)
T 1q6w_A 104 LRPVFIGDTIAASAEV--VEKQDFDEKSGVVTYKLEVKNQRGELVLTALYSA 153 (161)
T ss_dssp CSCCBTTCEEEEEEEE--EEEEEEETTEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred ecCCCCCCEEEEEEEE--EEEEecCCCceEEEEEEEEEeCCCCEEEEEEEEE
Confidence 35778886 4433332 11111 3566777777888777653333333
No 50
>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structur genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum}
Probab=57.97 E-value=32 Score=23.15 Aligned_cols=49 Identities=14% Similarity=0.257 Sum_probs=26.7
Q ss_pred CCCCCCCc-EEEEEEE--EeCCC-CC-CeEEEEEEEEEeCCCCEEEEEEEEEEE
Q 032014 92 SCPIEAGN-FVLSHAE--TLPGY-TP-PGVYTLKMKMIGKNGYQLTCFSFKFKI 140 (149)
Q Consensus 92 ~CPl~~G~-~~~~~~~--~ip~~-~P-~g~y~v~~~l~d~~~~~i~C~~~~~~i 140 (149)
.=|+.+|+ .+.+..+ .-+.. -| .+..+++.+..|++|+.++=.+..+-+
T Consensus 89 ~~PV~~GD~L~~~~~v~~~~~~~s~~~~~~v~~~~~~~nq~Ge~V~~~~~~~~~ 142 (154)
T 3exz_A 89 PNPTRPGDELHVETTVLAITPSKSRPDRAIVTCQSDTLNQRGEVVQRSTAKVVV 142 (154)
T ss_dssp SSCCCTTCEEEEEEEEEEEEECSSCTTEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred cCCCCCCCEEEEEEEEEEEEecccCCCceEEEEEEEEEeCCCCEEEEEEEEEEE
Confidence 45888896 4433332 12211 12 345567777778888876444444433
No 51
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=57.24 E-value=8.8 Score=31.88 Aligned_cols=16 Identities=25% Similarity=0.708 Sum_probs=12.4
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
+.||+.||+ |+|++..
T Consensus 79 tq~pI~PG~~~~Y~f~~ 95 (534)
T 1zpu_A 79 TQCPIAPGSTMLYNFTV 95 (534)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCCcCCCCeEEEEEEe
Confidence 589999997 7766653
No 52
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=56.29 E-value=3.8 Score=35.86 Aligned_cols=52 Identities=6% Similarity=-0.059 Sum_probs=29.2
Q ss_pred CCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCccCCCCCCCc-EEEEEE
Q 032014 47 VTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEEVSCPIEAGN-FVLSHA 105 (149)
Q Consensus 47 ~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~~ 105 (149)
..|+.+.|++.=.+++.. .+.+.|+.++....|.=..+.||+.||+ |+|.+.
T Consensus 204 ~~GD~v~v~~~N~l~~~~-------siH~HG~~~~~~~~dG~~~~~~~I~PG~~~tY~f~ 256 (770)
T 2r7e_B 204 EVEDNIMVTFRNQASRPY-------SFYSSLISYEEDQRQGAEPRKNFVKPNETKTYFWK 256 (770)
T ss_dssp CSSSCEEEEEECCSSSCC-------CCCBTTCCCCCCSSSCTTTTSSCCCSSCEEEEECC
T ss_pred EcCCEEEEEEEECCCCCc-------ceeecccccccccCCCCcCccCccCCCCeEEEEEE
Confidence 468888887764443321 2334455444333223223689999997 665544
No 53
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=55.27 E-value=52 Score=23.21 Aligned_cols=46 Identities=7% Similarity=0.026 Sum_probs=31.2
Q ss_pred EEEEEEEEceEEEccCCcCCCCccCCCCCCCcEEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEE
Q 032014 68 KVMIEVRYFGIRVHSETHDICEEVSCPIEAGNFVLSHAETLPGYTPPGVYTLKMKMIGKNGYQL 131 (149)
Q Consensus 68 ~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i 131 (149)
-..++++.+|-.+-.. ..+.|+|+... +.|.|+++++.+|..|..-
T Consensus 124 V~~Ve~~~dg~~v~t~------------t~~~y~~~~~~------~~G~~tl~a~A~D~aGn~s 169 (190)
T 3pdd_A 124 ISRVDFLVDGEVIGSD------------REAPYEYEWKA------VEGNHEISVIAYDDDDAAS 169 (190)
T ss_dssp EEEEEEEETTEEEEEE------------CSSSEEEEEEC------CSEEEEEEEEEEETTCCBC
T ss_pred EEEEEEEECCEEEecc------------cCCCEEEEEec------CCeeEEEEEEEEECCCCEE
Confidence 3567777777544321 12346665543 7899999999999988754
No 54
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=55.00 E-value=6.5 Score=30.36 Aligned_cols=16 Identities=25% Similarity=0.470 Sum_probs=12.5
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
+.||+.||+ ++|.+..
T Consensus 78 t~~~i~PG~~~~y~f~~ 94 (318)
T 3g5w_A 78 TQHAIEPGDTFTYKFKA 94 (318)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccccCCCCCEEEEEEEc
Confidence 479999997 7776664
No 55
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=54.30 E-value=21 Score=24.97 Aligned_cols=76 Identities=20% Similarity=0.283 Sum_probs=49.2
Q ss_pred cEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcC--CCCccCCCCCCCcEEEEEEEEeCC
Q 032014 33 PLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHD--ICEEVSCPIEAGNFVLSHAETLPG 110 (149)
Q Consensus 33 ~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d--~C~~~~CPl~~G~~~~~~~~~ip~ 110 (149)
.+++.++.+..+|-.-..++.++++|..-+++.+. +..++.|-|-. -+..+| +=...-=|+..|.+.|.++..-|.
T Consensus 4 ~V~i~~V~vl~np~~f~~p~~feI~fEc~e~L~~d-lewkliYVgSa-~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpPd 81 (155)
T 1roc_A 4 IVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHD-LEWKLTYVGSS-RSLDHDQELDSILVGPVPVGVNKFVFSADPPS 81 (155)
T ss_dssp SEEEEEEEECSCSEETTSCEEEEEEEEECSCCSSC-EEEEEEECCCT-TSSCTTEEEEEEEECSCCSEEEEEEEEECCCC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCC-cEEEEEEEeCC-CcccCceEeeEEEeccccceeEEEEEEcCCCC
Confidence 68999999999888889999999999998887655 33333332211 111111 000123589999877766666554
No 56
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=53.93 E-value=25 Score=25.10 Aligned_cols=76 Identities=18% Similarity=0.192 Sum_probs=48.8
Q ss_pred CcEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCc-EEEEEEEEceEEEccCCcC--CCCccCCCCCCCcEEEEEEEEe
Q 032014 32 FPLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGG-KVMIEVRYFGIRVHSETHD--ICEEVSCPIEAGNFVLSHAETL 108 (149)
Q Consensus 32 ~~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d--~C~~~~CPl~~G~~~~~~~~~i 108 (149)
..++|.+|.+..+|-.-..++.++++|..-+.+.+. .+++.. .|.-. +..+| +=...-=|+..|.+.|.++..-
T Consensus 8 s~V~l~~V~VlnNp~~f~dP~~FeI~fEcle~L~~dleWkliY-VgSa~--s~~~DQ~Ld~v~VGPi~~G~~kFv~~adp 84 (175)
T 2hue_A 8 SIVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHDLEWKLTY-VGSSR--SLDHDQELDSILVGPVPVGVNKFVFSADP 84 (175)
T ss_dssp CSEEEEEEEECSCSEETTSCEEEEEEEEECSCCSSCEEEEEEE-ESCTT--CGGGEEEEEEEEECSCCSEEEEEEEEECC
T ss_pred CEEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCcEEEEEE-EcCCC--CccCCeEeeEEEECCccceeEEEEEEcCC
Confidence 378999999998888889999999999988887655 344331 12110 11111 0011235899998677666655
Q ss_pred CC
Q 032014 109 PG 110 (149)
Q Consensus 109 p~ 110 (149)
|.
T Consensus 85 Pd 86 (175)
T 2hue_A 85 PS 86 (175)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 57
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=53.19 E-value=6.1 Score=32.53 Aligned_cols=15 Identities=33% Similarity=0.862 Sum_probs=11.8
Q ss_pred cCCCCCCCc-EEEEEE
Q 032014 91 VSCPIEAGN-FVLSHA 105 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~ 105 (149)
+.||+.||+ |+|++.
T Consensus 83 tq~~I~PG~~~~Y~f~ 98 (503)
T 1hfu_A 83 NQCPISPGHAFLYKFT 98 (503)
T ss_dssp TBCCBCTTCEEEEEEC
T ss_pred ccCCcCCCCeEEEEEE
Confidence 589999997 666654
No 58
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=52.91 E-value=51 Score=28.58 Aligned_cols=77 Identities=12% Similarity=0.152 Sum_probs=47.1
Q ss_pred CCCCCcEEEEEEEEEeeEecCc-EEEEEEEEce-----------EEEccCCcCCCCccCCCCCCCcEEEEEEEEeCCCCC
Q 032014 46 VVTGKPAIFNISAVTDRSVSGG-KVMIEVRYFG-----------IRVHSETHDICEEVSCPIEAGNFVLSHAETLPGYTP 113 (149)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~-----------~~~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~P 113 (149)
+.|||.++|.+.| ++..... .+.+.+..|- +++-.. .+.+=...-=-..| -++++++..|..+|
T Consensus 31 VRRGQ~F~i~l~f--~r~~~~~d~l~l~~~tGp~Ps~~~gT~~~~~l~~~-~~~~W~a~~~~~~~-~~~tvsv~spa~A~ 106 (692)
T 1vjj_A 31 LRRGQNFQVLMIM--NKGLGSNERLEFIVSTGPYPSESAMTKAVFPLSNG-SSGGWSAVLQASNG-NTLTISISSPASAP 106 (692)
T ss_dssp EETTSCEEEEEEE--SSCCCTTCEEEEEEECSSSCCTTTTSEEEEEEESS-CCSSSEEEEEEEET-TEEEEEEECCTTCC
T ss_pred EcCCCcEEEEEEE--CCCCCCCceEEEEEEeCCCCCcCCCeEEEEEecCC-CCCceEEEEEecCC-CEEEEEEeCCCCCe
Confidence 5799999999998 4555543 4566655553 122222 11110000000112 36788899999999
Q ss_pred CeEEEEEEEEEeC
Q 032014 114 PGVYTLKMKMIGK 126 (149)
Q Consensus 114 ~g~y~v~~~l~d~ 126 (149)
-|+|++.++....
T Consensus 107 VG~Y~L~v~~~~~ 119 (692)
T 1vjj_A 107 IGRYTMALQIFSQ 119 (692)
T ss_dssp CEEEEEEEEEEET
T ss_pred EEEEEEEEEEEec
Confidence 9999999998763
No 59
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=52.79 E-value=16 Score=30.53 Aligned_cols=16 Identities=25% Similarity=0.528 Sum_probs=12.4
Q ss_pred cCCCCCC-Cc-EEEEEEE
Q 032014 91 VSCPIEA-GN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~-G~-~~~~~~~ 106 (149)
+.||+.| |+ |+|++..
T Consensus 112 tq~~I~P~G~~~~Y~f~~ 129 (559)
T 2q9o_A 112 TECPIPPKGGQRTYRWRA 129 (559)
T ss_dssp TBCCBCTTTEEEEEEEEC
T ss_pred ccCccCCCCCeEEEEEEC
Confidence 5799999 97 7776654
No 60
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=52.00 E-value=26 Score=25.14 Aligned_cols=76 Identities=20% Similarity=0.283 Sum_probs=48.4
Q ss_pred cEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcC--CCCccCCCCCCCcEEEEEEEEeCC
Q 032014 33 PLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHD--ICEEVSCPIEAGNFVLSHAETLPG 110 (149)
Q Consensus 33 ~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d--~C~~~~CPl~~G~~~~~~~~~ip~ 110 (149)
.++|.+|.+..+|-.-..++.++++|..-+++.+. +..++.|-|-. -+..+| +=...-=|+..|.+.|.++..-|.
T Consensus 5 ~V~l~~V~VlnNp~~f~dP~~FeI~fEcle~L~~d-leWkliYVgSa-~s~~~DQ~Ldsv~VGPi~~G~~kFv~~adpPd 82 (179)
T 2idc_A 5 IVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHD-LEWKLTYVGSS-RSLDHDQELDSILVGPVPVGVNKFVFSADPPS 82 (179)
T ss_dssp SEEEEEEEEESCSEETTSCEEEEEEEEECSCCSSC-EEEEEEECSCT-TCGGGCEEEEEEEECSCCSEEEEEEEEECCCC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCC-cEEEEEEEcCC-CcccCCeEeeEEEECCccceeEEEEEEcCCCC
Confidence 68999999999888889999999999988877655 33333232210 011111 101123589999766666665553
No 61
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=51.67 E-value=6.6 Score=29.61 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=27.2
Q ss_pred CCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcCCCCccCCCCCCCc-EEEEEEE
Q 032014 47 VTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHDICEEVSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 47 ~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~~~ 106 (149)
.+|+.+.|++.=.+++. ..+.+-|+..+.. .|.=..+.||+.||+ |+|++..
T Consensus 41 ~~Gd~v~v~~~N~~~~~-------~siH~HG~~~~~~-~DG~~~t~~~i~pG~~~~Y~f~~ 93 (276)
T 3kw8_A 41 NEGDTLHIEFTNTMDVR-------ASLHVHGLDYEIS-SDGTAMNKSDVEPGGTRTYTWRT 93 (276)
T ss_dssp ETTCEEEEEEEECSSSC-------BCCEESSSBCCGG-GSCCTTTTCSBCTTCEEEEEEEC
T ss_pred ECCCEEEEEEEECCCCC-------ccEeecCcccCCc-cCCCcCCcCCCCCCCEEEEEEEc
Confidence 46777776665333221 1223444433322 232224579999997 6665554
No 62
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=50.25 E-value=27 Score=30.44 Aligned_cols=78 Identities=13% Similarity=-0.012 Sum_probs=48.2
Q ss_pred CCCCCcEEEEEEEEEeeEecCc--EEEEEEEEce---------EEEc--cCCcCCCCccCCCCCCCcEEEEEEEEeCCCC
Q 032014 46 VVTGKPAIFNISAVTDRSVSGG--KVMIEVRYFG---------IRVH--SETHDICEEVSCPIEAGNFVLSHAETLPGYT 112 (149)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~i~~~--~~~v~~~~~~---------~~~~--~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~ 112 (149)
+.|||.++|.+.|. +..... .+.+.+..|- ..++ ....+.+=...-=-..| -++++++..|..+
T Consensus 76 VRRGQ~F~i~l~f~--r~~~~~~d~l~l~~~tGp~Ps~~~gT~~~~~l~~~~~~~~W~A~~~~~~~-~~~tvsv~spa~A 152 (731)
T 1ex0_A 76 VRRGQSFYVQIDFS--RPYDPRRDLFRVEYVIGRYPQENKGTYIPVPIVSELQSGKWGAKIVMRED-RSVRLSIQSSPKC 152 (731)
T ss_dssp EETTSEEEEEEEES--SCCCTTTCCEEEEEECBSSCCGGGTSEEEECEESSCCTTSCEEEEEEEET-TEEEEEEECCTTC
T ss_pred EcCCCcEEEEEEeC--CCCCCCCcEEEEEEEeCCCCCccCCcEEEEEeccCCCCCceEEEEEecCC-CEEEEEEecCCCC
Confidence 57999999999984 555543 4666666653 1222 22111111100000112 3688889999999
Q ss_pred CCeEEEEEEEEEeC
Q 032014 113 PPGVYTLKMKMIGK 126 (149)
Q Consensus 113 P~g~y~v~~~l~d~ 126 (149)
|-|+|++.++....
T Consensus 153 ~VG~Y~L~v~~~~~ 166 (731)
T 1ex0_A 153 IVGKFRMYVAVWTP 166 (731)
T ss_dssp CCEEEEEEEEEEET
T ss_pred eEEEEEEEEEEEec
Confidence 99999999998764
No 63
>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A 3aad_B
Probab=50.13 E-value=31 Score=24.79 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=50.2
Q ss_pred cEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCc-EEEEEEEEceEEEccCCcC--CCCccCCCCCCCcEEEEEEEEeC
Q 032014 33 PLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGG-KVMIEVRYFGIRVHSETHD--ICEEVSCPIEAGNFVLSHAETLP 109 (149)
Q Consensus 33 ~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d--~C~~~~CPl~~G~~~~~~~~~ip 109 (149)
.++|.+|.+..+|-.-..++.++++|..-+++.+. .+++.- .|.-. +..+| +=...-=|+..|.+.|.++..-|
T Consensus 28 ~V~i~~V~VlnNp~~F~dP~~FeItfEcle~L~~dleWkliY-VGSa~--s~~~DQ~Ldsv~VGPi~~G~~kFvfeadpP 104 (182)
T 2i32_A 28 KVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIY-VGSAE--SEEYDQVLDSVLVGPVPAGRHMFVFQADAP 104 (182)
T ss_dssp SEEEEEEEECSCSEETTSCEEEEEEEEESSCCSSCEEEEEEE-ESCSS--CGGGEEEEEEEEECCCCSEEEEEEEEECCC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEccccCCCcEEEEEE-EcCCC--CccCCeEeeEEEECCccceEEEEEEEeCCC
Confidence 78999999998887889999999999998887655 344331 12210 11111 00112358999987777766655
Q ss_pred CC--CC
Q 032014 110 GY--TP 113 (149)
Q Consensus 110 ~~--~P 113 (149)
.. +|
T Consensus 105 d~~kIP 110 (182)
T 2i32_A 105 NPGLIP 110 (182)
T ss_dssp CGGGSC
T ss_pred CcccCC
Confidence 43 55
No 64
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=49.26 E-value=28 Score=24.49 Aligned_cols=79 Identities=14% Similarity=0.196 Sum_probs=50.3
Q ss_pred cEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCc-EEEEEEEEceEEEccCCcC--CCCccCCCCCCCcEEEEEEEEeC
Q 032014 33 PLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGG-KVMIEVRYFGIRVHSETHD--ICEEVSCPIEAGNFVLSHAETLP 109 (149)
Q Consensus 33 ~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d--~C~~~~CPl~~G~~~~~~~~~ip 109 (149)
.++|.++.+..+|-.-..++.++++|..-+++.+. .+++.. .|.-. +..+| +=...-=|+..|.+.|.++..-|
T Consensus 3 ~V~i~~V~vlnnp~~f~~p~~feI~fEc~e~L~~dlewkliY-VgSa~--s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpP 79 (161)
T 2cu9_A 3 IVNILSVNVLNNPAKFSDPYKFEITFECLEPLKSDLEWKLTY-VGSAT--SQSYDQILDTLLVGPIPIGINKFVFEADPP 79 (161)
T ss_dssp SEEEEEEEESSCSEETTSCEEEEEEEEECSCCSSCEEEEEEE-ESSTT--SCCCEEEEEEEEECSCCSEEEEEEEEECCC
T ss_pred eEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCeEEEEEE-EcCCC--CccCCeEeeEEEECCccceEEEEEEEcCCC
Confidence 57899999998888889999999999988887655 344331 12210 11111 00012358999987777776655
Q ss_pred C--CCCC
Q 032014 110 G--YTPP 114 (149)
Q Consensus 110 ~--~~P~ 114 (149)
. .+|.
T Consensus 80 d~~~IP~ 86 (161)
T 2cu9_A 80 NIDLLPQ 86 (161)
T ss_dssp CGGGSSC
T ss_pred ChhHCCC
Confidence 4 3555
No 65
>2xom_A Arabinogalactan endo-1,4-beta-galactosidase; hydrolase, carbohydrate-binding module, glycoside hydrolase, beta-sandwich.; HET: GAL; 0.95A {Thermotoga maritima} PDB: 2xon_A*
Probab=48.19 E-value=62 Score=21.99 Aligned_cols=30 Identities=23% Similarity=0.523 Sum_probs=23.6
Q ss_pred cEEEEEEEEeCCCCCCeEEEEEEEEEeCCCCE
Q 032014 99 NFVLSHAETLPGYTPPGVYTLKMKMIGKNGYQ 130 (149)
Q Consensus 99 ~~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~ 130 (149)
.|+.+..+.|- +|.|+|++.+.+....++.
T Consensus 58 ~~~~~~~Qtvt--lp~gtYtlsa~v~~~~~~~ 87 (152)
T 2xom_A 58 SFSFELSQEVE--LPAGVYRVGFWTHGEKGVK 87 (152)
T ss_dssp CEEEEEEEEEE--CCSEEEEEEEEEEESTTCE
T ss_pred CCeeEEEEEEE--eCCCeEEEEEEEEcCCCce
Confidence 36677777774 8999999999998766655
No 66
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=46.99 E-value=8.4 Score=31.23 Aligned_cols=15 Identities=0% Similarity=-0.093 Sum_probs=11.6
Q ss_pred CCCCCCCc-EEEEEEE
Q 032014 92 SCPIEAGN-FVLSHAE 106 (149)
Q Consensus 92 ~CPl~~G~-~~~~~~~ 106 (149)
.||+.||+ |+|++..
T Consensus 90 ~~~i~PG~~~~Y~f~~ 105 (451)
T 2uxt_A 90 ARMMSPNADWAPVLPI 105 (451)
T ss_dssp GGCBCTTCEECCEEEC
T ss_pred cCcCCCCCeEEEEEEc
Confidence 79999997 6666554
No 67
>3mtx_A Protein MD-1; LY86, RP105 associated protein, immune system; HET: PGT PGE; 2.00A {Gallus gallus} PDB: 3mu3_A*
Probab=46.70 E-value=30 Score=24.11 Aligned_cols=31 Identities=6% Similarity=-0.052 Sum_probs=25.4
Q ss_pred cCCCCCCCcEEEEEEEEEee-EecCcEEEEEE
Q 032014 43 PDPVVTGKPAIFNISAVTDR-SVSGGKVMIEV 73 (149)
Q Consensus 43 P~p~~~G~~~~i~~~~~~~~-~i~~~~~~v~~ 73 (149)
=|+..||+.+.....+.... .+..|+..+.+
T Consensus 90 fC~~~KGE~i~~~~~v~~pg~~~p~G~Y~vva 121 (151)
T 3mtx_A 90 FCGKKKGEHLYYEGPITLGIKEIPQRDYTITA 121 (151)
T ss_dssp TTTCCTTCEEEEEEEEECCCSSCCCEEEEEEE
T ss_pred ccCccCCeeEEEEEEeecCceecCCCcEEEEE
Confidence 48889999999999999888 89999754443
No 68
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=45.34 E-value=1.2e+02 Score=24.31 Aligned_cols=87 Identities=14% Similarity=0.093 Sum_probs=53.4
Q ss_pred cEEEeEEEEecCCCCCCCcEEEEEEEEEee----EecCcE-------------EEEEEEEceEEEccCCcCCCCccCCCC
Q 032014 33 PLKVQQIKIIPDPVVTGKPAIFNISAVTDR----SVSGGK-------------VMIEVRYFGIRVHSETHDICEEVSCPI 95 (149)
Q Consensus 33 ~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~----~i~~~~-------------~~v~~~~~~~~~~~~~~d~C~~~~CPl 95 (149)
.+++-++..+.+.++.|++++++.++.+-+ .+.... +..+-.++|.+.+ -+=++
T Consensus 14 Ti~wyD~~~S~~~~~vnE~~titGk~~~~~~WP~~v~~p~~~fln~~~Pgpv~~r~~~~ing~~~~---------~s~~l 84 (382)
T 1yew_A 14 TIHWYDLSWSKEKVKINETVEIKGKFHVFEGWPETVDEPDVAFLNVGMPGPVFIRKESYIGGQLVP---------RSVRL 84 (382)
T ss_dssp SEEEEEEEESCSEEETTCEEEEEEEEEECTTCCTTSCCTTSEEEEEESSSSSEEEEEEEETTEECS---------SCBCC
T ss_pred eEEEEeeecccceeccCCEEEEEEEEEEcccCHhhcCCCCeeEEecCCCCcceehhhhhhcCcCCC---------ceEEe
Confidence 468889999999999999999999988721 122111 1222222332211 13357
Q ss_pred CCCc-EEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEE
Q 032014 96 EAGN-FVLSHAETLPGYTPPGVYTLKMKMIGKNGYQL 131 (149)
Q Consensus 96 ~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i 131 (149)
+.|. |.|+..+. .-. +|+|++.-.+-=+++.++
T Consensus 85 e~G~~Y~fki~lk--AR~-PG~~HVH~~lNV~~~GPi 118 (382)
T 1yew_A 85 EIGKTYDFRVVLK--ARR-PGDWHVHTMMNVQGGGPI 118 (382)
T ss_dssp CTTCEEEEEEEEE--ECS-CEEEEEEEEEEESSSCBC
T ss_pred cCCCeEeEEEEEe--ccc-CccccceeeEeecCCCCC
Confidence 8886 66655543 223 499999988876665543
No 69
>2io5_A ASF1A protein; chaperone, chaperone-structural protein complex; 2.70A {Homo sapiens} SCOP: b.1.22.1
Probab=45.30 E-value=36 Score=24.30 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=49.8
Q ss_pred cEEEeEEEEecCCCCCCCcEEEEEEEEEeeEecCc-EEEEEEEEceEEEccCCcC--CCCccCCCCCCCcEEEEEEEEeC
Q 032014 33 PLKVQQIKIIPDPVVTGKPAIFNISAVTDRSVSGG-KVMIEVRYFGIRVHSETHD--ICEEVSCPIEAGNFVLSHAETLP 109 (149)
Q Consensus 33 ~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d--~C~~~~CPl~~G~~~~~~~~~ip 109 (149)
.++|.+|.+..+|-.-..++.++++|..-+++.+. .+++.. .|.- -+..+| +=...-=|+..|.+.|.++..-|
T Consensus 6 ~V~l~~V~vlnNp~~f~~P~~FeI~fEc~e~L~~dleWkliY-VgSa--~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpP 82 (175)
T 2io5_A 6 KVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIY-VGSA--ESEEYDQVLDSVLVGPVPAGRHMFVFQADAP 82 (175)
T ss_dssp CEEEEEEEECSCSEETTSCEEEEEEEEESSCCCSCEEEEEEE-ECCT--TCGGGEEEEEEEEECSCCSEEEEEEEEECCC
T ss_pred EEEEEEEEEeCCccccCCCeEEEEEEEeccccCCCcEEEEEE-EcCC--CCccCCeEeeEEEECCccceEEEEEEEeCCC
Confidence 68999999998887888999999999988887655 344331 1211 011111 00012358999987776766655
Q ss_pred CC--CC
Q 032014 110 GY--TP 113 (149)
Q Consensus 110 ~~--~P 113 (149)
.. +|
T Consensus 83 d~~~IP 88 (175)
T 2io5_A 83 NPGLIP 88 (175)
T ss_dssp CGGGSC
T ss_pred ChhhCC
Confidence 43 55
No 70
>1dyo_A Endo-1,4-beta-xylanase Y; carbohydrate-binding module, xylan-binding; 2.1A {Clostridium thermocellum} SCOP: b.18.1.7 PDB: 1h6y_A 1h6x_A
Probab=44.73 E-value=66 Score=21.87 Aligned_cols=35 Identities=14% Similarity=0.344 Sum_probs=22.1
Q ss_pred CCCCc-EEEEEEEEeCCCCCCeEEEEEEEEEeCCCC
Q 032014 95 IEAGN-FVLSHAETLPGYTPPGVYTLKMKMIGKNGY 129 (149)
Q Consensus 95 l~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~ 129 (149)
+++|. |+++.-+.+..-..+..+.+.++..|.+|+
T Consensus 65 l~~g~~Y~~Sa~V~~~~g~~~~~v~~~l~~~~~~g~ 100 (160)
T 1dyo_A 65 FVPGNTYCFSVVASFIEGASSTTFCMKLQYVDGSGT 100 (160)
T ss_dssp SCTTCEEEEEEEEECCSSSSCEEEEEEEEEECTTSC
T ss_pred ccCCCEEEEEEEEEECCCCCceeEEEEEEEEcCCCC
Confidence 78996 776666665443334456666666576666
No 71
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=43.36 E-value=72 Score=25.02 Aligned_cols=74 Identities=15% Similarity=0.057 Sum_probs=40.9
Q ss_pred CCCCcEEEEEEEEEe---eEecCcEEEEEEEEceEE----------EccCCcCCCCccCCCCCCCcEEEEEEEEeCCCCC
Q 032014 47 VTGKPAIFNISAVTD---RSVSGGKVMIEVRYFGIR----------VHSETHDICEEVSCPIEAGNFVLSHAETLPGYTP 113 (149)
Q Consensus 47 ~~G~~~~i~~~~~~~---~~i~~~~~~v~~~~~~~~----------~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~P 113 (149)
..|+.++-.+...++ +.+....+++.+. |.+. +.....+++.. -=+.+|+. |.+++.+|...|
T Consensus 45 ~~GE~VsG~V~I~~~~~~k~l~h~GIki~~~-G~~e~~~~~~~~~~f~~~~~eL~~p--G~L~~G~~-fpF~F~lp~~l~ 120 (340)
T 2r51_A 45 YDGETVSGKVSLSLKNPNKRLEHQGIKIEFI-GQIELYYDRGNHHEFVSLVKDLARP--GEITQSQA-FDFEFTHVEKPY 120 (340)
T ss_dssp ETBCCEEEEEEEEESSTTSCEEESCEEEEEE-EEEEEGGGTTCCEEEEEEEEEEECS--EEECSCEE-EEEEECSBCCCS
T ss_pred CCCCEEEEEEEEEECCCCCeeEEEEEEEEEE-EEEEEEecCCCcEEEEEEEEEecCC--CccCCCcE-EeeEeCCCCCCC
Confidence 467777777777666 4443333333321 2222 22222233321 12678876 888888886654
Q ss_pred C--------eEEEEEEEEE
Q 032014 114 P--------GVYTLKMKMI 124 (149)
Q Consensus 114 ~--------g~y~v~~~l~ 124 (149)
+ .+|.+++.+.
T Consensus 121 eSy~G~~g~IrY~vkv~i~ 139 (340)
T 2r51_A 121 ESYTGQNVKLRYFLRATIS 139 (340)
T ss_dssp CCEECSSEEEEEEEEEEEC
T ss_pred cCeEeeeEEEEEEEEEEEE
Confidence 3 5788888774
No 72
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=42.45 E-value=23 Score=28.35 Aligned_cols=24 Identities=21% Similarity=0.310 Sum_probs=14.4
Q ss_pred cCCCCCCCc-EEEEEEEEeCCCCCCeEE
Q 032014 91 VSCPIEAGN-FVLSHAETLPGYTPPGVY 117 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~~ip~~~P~g~y 117 (149)
..+++.||+ |+| ++.+|.. +.|+|
T Consensus 85 ~~~~I~PG~~~~Y--~f~~~~~-~~GT~ 109 (439)
T 2xu9_A 85 PFLEIPPGESWTY--EFTVPKE-LAGTF 109 (439)
T ss_dssp TTCCBCTTCEEEE--EEECCSS-CCEEE
T ss_pred CcccCCCCCeEEE--EEecCCC-CCcce
Confidence 457899997 555 4455533 44544
No 73
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=42.16 E-value=1.7e+02 Score=25.31 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=47.3
Q ss_pred CCCCCcEEEEEEEEEeeEecCc--EEEEEEEEceE-----------EEccCCcCCCCccCCCCCCCcEEEEEEEEeCCCC
Q 032014 46 VVTGKPAIFNISAVTDRSVSGG--KVMIEVRYFGI-----------RVHSETHDICEEVSCPIEAGNFVLSHAETLPGYT 112 (149)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~i~~~--~~~v~~~~~~~-----------~~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~ 112 (149)
+.|||.++|.+.|. ++..... .+.+.+..|-. ++-....+.+=....=-..| -.+++++..|...
T Consensus 33 vRRGQ~F~i~l~f~-~r~~~~~~d~l~l~~~~Gp~Ps~~~gT~~~~~l~~~~~~~~W~a~~~~~~~-~~~~vsv~spa~A 110 (687)
T 2q3z_A 33 VRRGQPFWLTLHFE-GRNYQASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQD-CTLSLQLTTPANA 110 (687)
T ss_dssp EETTSCEEEEEEES-SSCCCTTTEEEEEEEEESSSCCTTTTSEEEEEBCSCCCTTSCEEEEEEECS-SEEEEEEECCTTC
T ss_pred EcCCCcEEEEEEec-CCCCCCcccEEEEEEEeCCCCCccCCeEEEEEeccCCCCCceEEEEEecCC-CEEEEEEeCCCCC
Confidence 57999999999982 2333333 46666666531 22111112111100000122 3688889999999
Q ss_pred CCeEEEEEEEEEeC
Q 032014 113 PPGVYTLKMKMIGK 126 (149)
Q Consensus 113 P~g~y~v~~~l~d~ 126 (149)
|-|+|++.++....
T Consensus 111 ~VG~y~L~v~~~~~ 124 (687)
T 2q3z_A 111 PIGLYRLSLEASTG 124 (687)
T ss_dssp CCEEEEEEEEEEET
T ss_pred eEEEEEEEEEEEec
Confidence 99999999998763
No 74
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=41.77 E-value=17 Score=27.37 Aligned_cols=16 Identities=19% Similarity=0.306 Sum_probs=12.2
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
..||+.||+ ++|++..
T Consensus 107 ~~~~i~PG~~~~y~f~~ 123 (288)
T 3gdc_A 107 GAGSIAPGQSFTYEFDA 123 (288)
T ss_dssp TTCSBCTTCEEEEEEEC
T ss_pred cceeECCCCEEEEEEEc
Confidence 369999997 7776654
No 75
>2h6o_A Major outer envelope glycoprotein GP350; viral protein; HET: NAG MAN BMA NDG GAL FUC; 3.50A {Human herpesvirus 4}
Probab=39.44 E-value=90 Score=24.75 Aligned_cols=31 Identities=10% Similarity=0.114 Sum_probs=20.9
Q ss_pred CCCCCcEEEEEEEEEeeEecCcEEEEEEEEc
Q 032014 46 VVTGKPAIFNISAVTDRSVSGGKVMIEVRYF 76 (149)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~ 76 (149)
..|||...+++..+++..-...+..++...+
T Consensus 173 vVraQgmD~tvpislpt~p~~s~Fsi~~Em~ 203 (470)
T 2h6o_A 173 VVRAQGLDVTLPLSLPTSAQDSNFSVKTEML 203 (470)
T ss_dssp EESSSCEEEEEEEECSSCSSSCCBEEECCBC
T ss_pred EEEecceeEEEecccCCCcccCceEEEEeec
Confidence 3588888888888877665555555554443
No 76
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=38.97 E-value=63 Score=19.42 Aligned_cols=18 Identities=22% Similarity=0.543 Sum_probs=15.5
Q ss_pred CCeEEEEEEEEEeCCCCE
Q 032014 113 PPGVYTLKMKMIGKNGYQ 130 (149)
Q Consensus 113 P~g~y~v~~~l~d~~~~~ 130 (149)
-+|.|+++++..|.+|..
T Consensus 57 ~~G~Y~v~LtVtd~~G~~ 74 (85)
T 2y72_A 57 KAGTYNVTLKVTDDKGAT 74 (85)
T ss_dssp SCEEEEEEEEEEETTSCE
T ss_pred CCeEEEEEEEEEECCCCE
Confidence 469999999999988764
No 77
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=38.61 E-value=1.4e+02 Score=23.81 Aligned_cols=50 Identities=14% Similarity=0.262 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEEEEeCCCCCC--------------------------------------eEEEEEEEEEeCCCC------
Q 032014 94 PIEAGNFVLSHAETLPGYTPP--------------------------------------GVYTLKMKMIGKNGY------ 129 (149)
Q Consensus 94 Pl~~G~~~~~~~~~ip~~~P~--------------------------------------g~y~v~~~l~d~~~~------ 129 (149)
|+.+|. ++..++.|++..|+ ..|.+++.+.-..|.
T Consensus 261 ~V~~gs-~~~~~~~L~P~l~p~~~~~~~aldg~lk~~dt~l~ss~ii~~~~~~~~~gi~VsY~vkV~l~v~~gg~~~~~~ 339 (393)
T 1g4m_A 261 TVAPSS-TFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLA 339 (393)
T ss_dssp CBCTTE-EEEEEEEECCCGGGTTTCSSEEESSCTTSTTCCBCCCCCCCTTCCSGGGSEEEEEEEEEEEEECCC-------
T ss_pred cCCCCC-EEeeEEEEcCCCCCcccccceeeccccccCCcccccceeecCCCCccccceEEEEEEEEEEEecCCCcccccc
Q ss_pred --EEEEEEEEEEEecccc
Q 032014 130 --QLTCFSFKFKIGFGAL 145 (149)
Q Consensus 130 --~i~C~~~~~~i~~~~~ 145 (149)
.+ .+++++.|.....
T Consensus 340 ~~~l-~~~lPi~i~~p~p 356 (393)
T 1g4m_A 340 SSDV-AVELPFTLMHPKP 356 (393)
T ss_dssp -CEE-EEEEEEEEECCCC
T ss_pred cccE-EEEeCEEEecCCC
No 78
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=37.25 E-value=79 Score=21.60 Aligned_cols=40 Identities=8% Similarity=0.109 Sum_probs=26.1
Q ss_pred CCCcEEEEEEEEeCCC----CCCeEEEEEEEEEeC-CCCEEEEEE
Q 032014 96 EAGNFVLSHAETLPGY----TPPGVYTLKMKMIGK-NGYQLTCFS 135 (149)
Q Consensus 96 ~~G~~~~~~~~~ip~~----~P~g~y~v~~~l~d~-~~~~i~C~~ 135 (149)
++|.|+|+++..-... +=...|+|++...|. +|+..+.+.
T Consensus 59 ~~G~Y~YtI~E~~G~~~gvtYD~~~y~VtV~V~~d~~G~L~A~v~ 103 (141)
T 3klq_A 59 TVGQYTYRVYQKPSQNKDYQADTTVFDVLVYVTYDEDGTLVAKVI 103 (141)
T ss_dssp SCEEEEEEEEECCCSSTTEECCCCEEEEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEEEEEeCCCCCCcEEcCCEEEEEEEEEECCCCCEEEEEE
Confidence 6798898888742221 334578899998864 455565554
No 79
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=36.32 E-value=15 Score=28.65 Aligned_cols=16 Identities=13% Similarity=0.171 Sum_probs=12.5
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
..||+.||+ |+|.+..
T Consensus 118 t~~~I~PG~~~~y~f~~ 134 (343)
T 3cg8_A 118 NKSDVEPGGTRTYTWRT 134 (343)
T ss_dssp TTCSBCTTCEEEEEEEC
T ss_pred ccccccCCCEEEEEEEe
Confidence 479999997 7776655
No 80
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=35.76 E-value=21 Score=29.59 Aligned_cols=16 Identities=13% Similarity=-0.184 Sum_probs=12.4
Q ss_pred ccCCCCCCCc-EEEEEE
Q 032014 90 EVSCPIEAGN-FVLSHA 105 (149)
Q Consensus 90 ~~~CPl~~G~-~~~~~~ 105 (149)
...||+.||+ |+|++.
T Consensus 107 ~~~~~i~PG~~~~Y~f~ 123 (534)
T 3abg_A 107 WAEDITEPGSFKDYYYP 123 (534)
T ss_dssp CSSSCBSSCSCCCEEEC
T ss_pred CCCCCCCCCCeEEEEEe
Confidence 4679999997 777654
No 81
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=35.58 E-value=1.1e+02 Score=26.61 Aligned_cols=81 Identities=10% Similarity=0.091 Sum_probs=46.8
Q ss_pred CCCCCcEEEEEEEEEeeEecCcEEEEEEEEce---EEEccCCcCCCCccCCCCCCCc-EEEEEEEEeCCCCCCeEEEEEE
Q 032014 46 VVTGKPAIFNISAVTDRSVSGGKVMIEVRYFG---IRVHSETHDICEEVSCPIEAGN-FVLSHAETLPGYTPPGVYTLKM 121 (149)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~---~~~~~~~~d~C~~~~CPl~~G~-~~~~~~~~ip~~~P~g~y~v~~ 121 (149)
+.|||.++|.+.|.-. .-...++++....|- +++-....+.+=....=-..|. -.+++++..|..+|-|+|++.+
T Consensus 34 VRRGQ~F~i~l~f~G~-~Ps~~~~~~~~~~gT~~~~~l~~~~~~~~W~A~v~~~~~~~~~~tvsv~spa~A~VG~Y~L~v 112 (695)
T 1g0d_A 34 VRRGQPFSITLQCSDS-LPPKHHLELVLHLGKRDEVVIKVQKEHGARDKWWFNQQGAQDEILLTLHSPANAVIGHYRLAV 112 (695)
T ss_dssp EETTSCEEEEEEESSC-CCTTCEEEEEEEESTTCSEEEEEBSSSCCSSSCEEEEEECSSEEEEEEECCTTCCCEEEEEEE
T ss_pred EcCCCcEEEEEEeCCC-CCCccccccccCCCcEEEEEecccCCCCceeEEEEecCCCeeeEEEEEeCCCCCeEEEEEEEE
Confidence 5799999999998611 111112333332221 4554433332321100001222 2388999999999999999999
Q ss_pred EEEeCC
Q 032014 122 KMIGKN 127 (149)
Q Consensus 122 ~l~d~~ 127 (149)
+.....
T Consensus 113 ~~~~~~ 118 (695)
T 1g0d_A 113 LVMSPD 118 (695)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 987643
No 82
>2le2_A P56; UDG inhibition, DNA mimicry, hydrolas inhibitor; NMR {Bacillus phage PHI29}
Probab=35.40 E-value=34 Score=19.15 Aligned_cols=17 Identities=24% Similarity=0.431 Sum_probs=14.2
Q ss_pred eEEEEEEEEEeCCCCEE
Q 032014 115 GVYTLKMKMIGKNGYQL 131 (149)
Q Consensus 115 g~y~v~~~l~d~~~~~i 131 (149)
-.|+++|-+.|.+|.+-
T Consensus 8 dsy~~t~ll~dddg~q~ 24 (56)
T 2le2_A 8 DSYDVTMLLQDDDGKQY 24 (56)
T ss_dssp SSEEEEEEEECTTSCEE
T ss_pred cceeEEEEEEcCCCcee
Confidence 46999999999888764
No 83
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=34.55 E-value=30 Score=31.30 Aligned_cols=16 Identities=6% Similarity=0.119 Sum_probs=11.6
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
+.||+.||+ |+|++..
T Consensus 145 t~~~I~PG~t~tY~f~~ 161 (1065)
T 2j5w_A 145 ADDKVYPGEQYTYMLLA 161 (1065)
T ss_dssp GGGCBCTTCEEEEEEEC
T ss_pred cccccCCCCEEEEEEEe
Confidence 369999997 6665543
No 84
>4f27_A Clumping factor B; DEV-IGG fold, protein-peptide complex, fibronogen, cell SURF adhesion-blood clotting complex; 1.92A {Staphylococcus aureus} PDB: 4f20_A 4f24_A 4f1z_A 3au0_A 3at0_A 3asw_A
Probab=34.08 E-value=82 Score=24.12 Aligned_cols=41 Identities=7% Similarity=0.047 Sum_probs=32.4
Q ss_pred CcEEEeEEEEecCC--CCCCCcEEEEEEEEEeeEecCcE-EEEE
Q 032014 32 FPLKVQQIKIIPDP--VVTGKPAIFNISAVTDRSVSGGK-VMIE 72 (149)
Q Consensus 32 ~~~~i~~v~i~P~p--~~~G~~~~i~~~~~~~~~i~~~~-~~v~ 72 (149)
..+++++.+++.-. +..|+.+.++++|.++..+.+|. ..+.
T Consensus 38 ~kvt~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~vk~GD~fti~ 81 (363)
T 4f27_A 38 DKVTASDFKLEKTAFDPNQSGNTFMAANFKVTGQVKSGDYFTAK 81 (363)
T ss_dssp GGEEEEEEEESCSEECTTBTCCEEEEEEEEESSCCCTTCEEEEE
T ss_pred eeEEEEecccccccccCCCCceEEEEEEEEcCCCCCCCCEEEEE
Confidence 46888888887753 46799999999999988888884 4554
No 85
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=33.20 E-value=82 Score=19.16 Aligned_cols=16 Identities=25% Similarity=0.420 Sum_probs=12.0
Q ss_pred CeEEEEEEEEEeCCCC
Q 032014 114 PGVYTLKMKMIGKNGY 129 (149)
Q Consensus 114 ~g~y~v~~~l~d~~~~ 129 (149)
+|.|+++++..+..+.
T Consensus 54 ~G~YtV~Ltv~~g~~~ 69 (80)
T 1b4r_A 54 PGRYHVTAVLALGAGS 69 (80)
T ss_dssp SEEEEEEEEEECSSCE
T ss_pred CcEEEEEEEEEeCCce
Confidence 5999999999854443
No 86
>2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A 3k67_A
Probab=32.78 E-value=1e+02 Score=20.90 Aligned_cols=16 Identities=19% Similarity=0.225 Sum_probs=7.8
Q ss_pred eEEEEEEEEEeCCCCEE
Q 032014 115 GVYTLKMKMIGKNGYQL 131 (149)
Q Consensus 115 g~y~v~~~l~d~~~~~i 131 (149)
+.+.++.+. +++|+.+
T Consensus 134 ~~v~~~~~~-~~~G~~V 149 (159)
T 2b3n_A 134 NRYTIDVKC-YTGDKVV 149 (159)
T ss_dssp TEEEEEEEE-EETTEEE
T ss_pred CEEEEEEEE-EeCCeEE
Confidence 344555555 5555443
No 87
>3vq2_C Lymphocyte antigen 96; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_C* 2z64_C*
Probab=32.67 E-value=71 Score=21.98 Aligned_cols=29 Identities=10% Similarity=-0.003 Sum_probs=24.4
Q ss_pred cCCCCCCCcEEEEEEEEEeeE-ecCcEEEE
Q 032014 43 PDPVVTGKPAIFNISAVTDRS-VSGGKVMI 71 (149)
Q Consensus 43 P~p~~~G~~~~i~~~~~~~~~-i~~~~~~v 71 (149)
=|+..||+.+...+.++...- +..|...+
T Consensus 88 fCg~~KGE~i~~~~~~~~~~~~fpkG~Y~~ 117 (144)
T 3vq2_C 88 FCRALKGETVNTSIPFSFEGILFPKGHYRC 117 (144)
T ss_dssp GGGCCTTCCEEEEEEEEECCCCCCSSEEEE
T ss_pred ecccccCcEEEEEEEeecCcEEccCCcEEE
Confidence 388999999999999998887 88886443
No 88
>1j8r_A PAPG adhesin, pyelonephritic adhesin; PAG adhesin, GBO4, structural genomics, PSI, protein structure initiative; HET: NGA GLA GAL BGC; 1.80A {Escherichia coli} SCOP: b.2.3.3 PDB: 1j8s_A
Probab=31.75 E-value=74 Score=22.58 Aligned_cols=23 Identities=26% Similarity=0.459 Sum_probs=19.7
Q ss_pred EEEEEEeCCCCCCeEEEEEEEEE
Q 032014 102 LSHAETLPGYTPPGVYTLKMKMI 124 (149)
Q Consensus 102 ~~~~~~ip~~~P~g~y~v~~~l~ 124 (149)
+.+...+|..+|.|+|++.+...
T Consensus 134 l~f~~~LP~DLPkG~Y~~pv~yi 156 (196)
T 1j8r_A 134 IIFKVALPADLPLGDYSVKIPYT 156 (196)
T ss_dssp EEEEEECCTTCCSEEEEEEEEEE
T ss_pred EEEEEEccccCCCCccccccchh
Confidence 56778899999999999988755
No 89
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=31.55 E-value=19 Score=31.33 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=28.9
Q ss_pred CCCCcEEEEEEEEEeeEecCcEEEEEEEEceEEEccCCcC------CCCccCCCCCCCcEEEEEEEEeCC
Q 032014 47 VTGKPAIFNISAVTDRSVSGGKVMIEVRYFGIRVHSETHD------ICEEVSCPIEAGNFVLSHAETLPG 110 (149)
Q Consensus 47 ~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d------~C~~~~CPl~~G~~~~~~~~~ip~ 110 (149)
..|+.+.|++.=.+++.. .+.+-|+..+....| ....+.||+.||+ ++++++.++.
T Consensus 457 ~~GD~v~v~~~N~l~~~~-------siHwHGl~~~~~~~DG~~~~G~~~~~~~~I~PG~-t~tY~f~~~~ 518 (742)
T 2r7e_A 457 EVGDTLLIIFKNQASRPY-------NIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGE-IFKYKWTVTV 518 (742)
T ss_dssp BTTCEEECCEECCSSSCB-------CCEETTCSEECCTTCSCCSSSCSSTTTSCCBSSC-EECCEEECCS
T ss_pred ECCCEEEEEEEeCCCCCc-------CEEecccccCCcccccccCCCCcccccccCCCCC-eEEEEEEecc
Confidence 457677776654443321 223445433333222 2334679999997 3344444554
No 90
>3uam_A Chitin binding domain; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, protein binding; 2.00A {Burkholderia pseudomallei}
Probab=31.33 E-value=1.3e+02 Score=22.06 Aligned_cols=88 Identities=14% Similarity=0.138 Sum_probs=45.9
Q ss_pred CCCCCcEEEEEEEEEeeEecCcEEEEEEEEceE----EEccCCcC---CCCccCC--CC---------CCCcEEEEEEEE
Q 032014 46 VVTGKPAIFNISAVTDRSVSGGKVMIEVRYFGI----RVHSETHD---ICEEVSC--PI---------EAGNFVLSHAET 107 (149)
Q Consensus 46 ~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~----~~~~~~~d---~C~~~~C--Pl---------~~G~~~~~~~~~ 107 (149)
+..|++++|+..+++... ...+++.+.--|+ ||-..+.+ +|....= |. .++. .|+.+..
T Consensus 108 v~~G~~~tf~w~~TA~H~--ts~f~~YITK~gwdp~~pLtw~dLEl~pf~~~~~~~~p~~~~~~d~~~~p~~-~y~~~v~ 184 (216)
T 3uam_A 108 VRSGQSLQISWSYSMPHK--TRRWTYWITKPGWDTQARLARAHFEPDPLKVYLNTYQPYWGPDADKELIPQG-ETIHEFN 184 (216)
T ss_dssp ECTTCEEEEEEEEESCCC--EEEEEEEEBCTTCCTTSCCCGGGBCSSCSEEEECCCCSTTSTTHHHHHSCSS-CEEEEEE
T ss_pred eccCceEEEEEEeeccCC--CceEEEEECCCCCCCCCcccHHHccccceeeccCCCccccccccccccCCCC-eEEEEEE
Confidence 445777777777776543 1135566554454 33322333 4553111 21 1232 4667888
Q ss_pred eCCCCCCeEEEE--EEEEEeCCCCEE-EEEEEEEE
Q 032014 108 LPGYTPPGVYTL--KMKMIGKNGYQL-TCFSFKFK 139 (149)
Q Consensus 108 ip~~~P~g~y~v--~~~l~d~~~~~i-~C~~~~~~ 139 (149)
||. .+|+..| .|+..| .++-+ .|.++.|+
T Consensus 185 lP~--RsG~hVIy~vWqraD-t~eaFYnCsDV~F~ 216 (216)
T 3uam_A 185 LPT--RTGYHVLLAVWDVAD-TANAFYQVIDLNFA 216 (216)
T ss_dssp CCS--CCEEEEEEEEEEETT-SSEEEEEEEEEEEC
T ss_pred CCC--CcCCEEEEEEEEecC-CCCCCEEEEEEEeC
Confidence 883 4674433 444433 25554 89988874
No 91
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=29.82 E-value=2e+02 Score=22.47 Aligned_cols=74 Identities=9% Similarity=0.017 Sum_probs=38.8
Q ss_pred CCCCcEEEEEEEEEee---EecCcEEEEEEEEceEE----------EccCCcCCCCccCCCCCCCcEEEEEEEEeCCCCC
Q 032014 47 VTGKPAIFNISAVTDR---SVSGGKVMIEVRYFGIR----------VHSETHDICEEVSCPIEAGNFVLSHAETLPGYTP 113 (149)
Q Consensus 47 ~~G~~~~i~~~~~~~~---~i~~~~~~v~~~~~~~~----------~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~P 113 (149)
..|+.++-.+..++++ .+....+++.+ .|.+. +.+...+++.. -=+.+| ++|.+++..|...+
T Consensus 45 ~~GE~VsG~V~I~~~~~gk~l~h~GIki~~-~G~~e~~~~~~~~~~fls~~~eL~~~--G~L~~g-~~fpF~F~~~~~~~ 120 (341)
T 2fau_A 45 YDGESVSGKVNLAFKQPGKRLEHQGIRIEF-VGQIELFNDKSNTHEFVNLVKELALP--GELTQS-RSYDFEFMQVEKPY 120 (341)
T ss_dssp CTTCCEEEEEEEEESSSSCCEEESCEEEEE-EEEEEECSTTCCEEEEEEEEEEEECS--EEECSC-EEEEEEECSCCCCS
T ss_pred CCCCEEEEEEEEEECCCCCeeeEEEEEEEE-EEEEEEEecCCCcEEEEEEEEEEcCC--CccCCC-cEEeeEeCCCCCCC
Confidence 5677777777777654 33322233332 22222 22222333321 126777 67777777644332
Q ss_pred --------CeEEEEEEEEE
Q 032014 114 --------PGVYTLKMKMI 124 (149)
Q Consensus 114 --------~g~y~v~~~l~ 124 (149)
..+|.+++.+.
T Consensus 121 eSy~G~~~~IrY~vrv~i~ 139 (341)
T 2fau_A 121 ESYIGANVRLRYFLKVTIV 139 (341)
T ss_dssp CCEECSSEEEEEEEEEEEC
T ss_pred cceEeeEEEEEEEEEEEEE
Confidence 25788888774
No 92
>3b72_A Lysozyme C; hen egg-white lysozyme, protein-SDS complex, MPD, allergen, antimicrobial, bacteriolytic enzyme glycosidase, hydrolase; 1.50A {Gallus gallus} SCOP: d.2.1.2 PDB: 3b6l_A 1lsy_A 1lsz_A*
Probab=29.55 E-value=9.6 Score=26.39 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=4.8
Q ss_pred CcceehhhhHHhhhhhcccccceeec
Q 032014 1 MNRQLLLLFTFYVLVSSIQAIDFTYC 26 (149)
Q Consensus 1 m~~~~~l~~~~~l~~~~~~~~~~~~C 26 (149)
||. + ++++++++++.+.+-.|..|
T Consensus 1 m~~-~-~~~l~~~l~~~~~ak~~~rC 24 (147)
T 3b72_A 1 MRS-L-LILVLCFLPLAALGKVFGRC 24 (147)
T ss_dssp --------------------CBCCHH
T ss_pred Chh-H-HHHHHHHHHHhhceeeeccc
Confidence 785 3 33333343444556678888
No 93
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=29.21 E-value=38 Score=27.28 Aligned_cols=15 Identities=27% Similarity=0.361 Sum_probs=11.2
Q ss_pred CCCCCCCc-EEEEEEE
Q 032014 92 SCPIEAGN-FVLSHAE 106 (149)
Q Consensus 92 ~CPl~~G~-~~~~~~~ 106 (149)
.||+.||+ |+|++..
T Consensus 78 ~~~i~PG~~~~Y~f~~ 93 (448)
T 3aw5_A 78 SFAITPGESYNYSFDV 93 (448)
T ss_dssp GGCBCTTCEEEEEEEC
T ss_pred CccCCCCCEEEEEEEc
Confidence 39999997 6666553
No 94
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=27.06 E-value=2.5e+02 Score=22.68 Aligned_cols=97 Identities=13% Similarity=0.072 Sum_probs=60.9
Q ss_pred cEEEeEEEEecCCCCCCCcEEEEEEEEEeeE----ecCcE-------------EEEEEEEceEEEccCCcCCCCccCCCC
Q 032014 33 PLKVQQIKIIPDPVVTGKPAIFNISAVTDRS----VSGGK-------------VMIEVRYFGIRVHSETHDICEEVSCPI 95 (149)
Q Consensus 33 ~~~i~~v~i~P~p~~~G~~~~i~~~~~~~~~----i~~~~-------------~~v~~~~~~~~~~~~~~d~C~~~~CPl 95 (149)
.+++-++..+-..++.|+.++++.++.+-++ +.... ++.+-.++|-|.+ -+=++
T Consensus 42 Ti~wyD~~~S~~~~~vne~~tiTGk~~~~~~WP~~v~~p~~~fln~~~Pgp~~~r~~~~ing~p~~---------~s~~l 112 (419)
T 3rfr_A 42 TLNWYDVQWSKTTVNVNEEMILSGKVHVFSAWPQAVANPRVSFLNAGEPGPVLVRTAQFIGEQFAP---------RSVSL 112 (419)
T ss_dssp SEEEEEEECSCSEEETTCEEEEEEEEEECTTCCTTSCCTTSEEEEEECSSSSEEEEEEEETTEECS---------SCBCC
T ss_pred eEEEEEeeeccceeccCCEEEEEEEEEEcccChhhcCCcceeEEecCCCCcceeehhhhhcCcCCc---------ceEEe
Confidence 5788999999888999999999999876311 22111 1222222333321 23467
Q ss_pred CCCc-EEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEEEEEEEEEEEe
Q 032014 96 EAGN-FVLSHAETLPGYTPPGVYTLKMKMIGKNGYQLTCFSFKFKIG 141 (149)
Q Consensus 96 ~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i~C~~~~~~i~ 141 (149)
+.|. |.|+..+. .-. +|+|++.-.+--+++.++.==..-+.|.
T Consensus 113 ~~G~~Y~fki~lk--aR~-PG~~HVH~~lNV~~~Gp~iGPG~~v~I~ 156 (419)
T 3rfr_A 113 EIGKDYAFSINLR--GRR-AGRWHVHAQINVEGGGPIIGPGQWIEIK 156 (419)
T ss_dssp CTTCEEEEEEEEE--ECS-CEEEEEEEEEEETTTEEEEEEEEEEEEE
T ss_pred cCCCeEeEEEEEe--ccc-CcccccceeEeeccCCCCcCCceEEEEc
Confidence 8896 66665543 223 4999999998878877765444444443
No 95
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=26.80 E-value=1.9e+02 Score=23.55 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=30.0
Q ss_pred CCCCc-EEEEEEEEeCCCCCCeEEEEEEEEEeCCCCEE
Q 032014 95 IEAGN-FVLSHAETLPGYTPPGVYTLKMKMIGKNGYQL 131 (149)
Q Consensus 95 l~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~i 131 (149)
+++|+ -+.++++.+|.....|.|.+.+.+...+++.-
T Consensus 411 ~~~g~~~t~~~~vt~~~~~~~g~y~l~~~~~~~~~~~s 448 (601)
T 1w8o_A 411 LMPGRQAKGQVTITVPAGTTPGRYRVGATLRTSAGNAS 448 (601)
T ss_dssp BCTTCEEEEEEEEECCTTCCCEEEEEEEEEEETTEEEE
T ss_pred cCCCCceEEEEEEecCCCCCCCcEEeeEEEEecCceeE
Confidence 46787 57888999998888899999999988766543
No 96
>2kps_A Uncharacterized protein; beta strand, figure eight, figure 8, structural genomics, PSI-2, protein structure initiative; NMR {Desulfitobacterium hafniense Y51} PDB: 2l3u_A
Probab=26.02 E-value=46 Score=20.99 Aligned_cols=17 Identities=18% Similarity=0.134 Sum_probs=13.8
Q ss_pred CCCCcEEEEEEEEeCCC
Q 032014 95 IEAGNFVLSHAETLPGY 111 (149)
Q Consensus 95 l~~G~~~~~~~~~ip~~ 111 (149)
+++|+|++..++.+|..
T Consensus 55 l~~G~~~vpv~v~lP~g 71 (98)
T 2kps_A 55 KAVGEHTVKIYWQLPAG 71 (98)
T ss_dssp CCSSCEEEECCCBCSSC
T ss_pred CCCCeEEEeEEEECCCC
Confidence 48899888888888865
No 97
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=25.99 E-value=1.3e+02 Score=19.16 Aligned_cols=27 Identities=19% Similarity=0.354 Sum_probs=19.8
Q ss_pred CeEEEEEEEEEeCCCCEEEEEEEEEEEe
Q 032014 114 PGVYTLKMKMIGKNGYQLTCFSFKFKIG 141 (149)
Q Consensus 114 ~g~y~v~~~l~d~~~~~i~C~~~~~~i~ 141 (149)
+|.|.++.+..|.+|.... ....+.+.
T Consensus 58 ~G~Y~VtY~VtDs~Gn~~t-~trtVtV~ 84 (103)
T 2kpn_A 58 AGTYVLTYTVTDSKGHEVT-AKQTVTVK 84 (103)
T ss_dssp CEEEEEEEEEECTTSCEEE-EEEEEEEE
T ss_pred ceEEEEEEEEEcCCCCEEE-EEEEEEEe
Confidence 5999999999998887653 44555544
No 98
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=25.68 E-value=16 Score=30.08 Aligned_cols=16 Identities=13% Similarity=-0.006 Sum_probs=12.1
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
..||+.||+ |+|.+..
T Consensus 87 p~~~i~PG~~~~Y~f~~ 103 (488)
T 3od3_A 87 PQGIIPPGGKRSVTLNV 103 (488)
T ss_dssp TTCCBCTTCEEEEEEEC
T ss_pred CcCcCcCCCeEEEEEec
Confidence 479999997 7776553
No 99
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=25.35 E-value=1.4e+02 Score=19.10 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=26.7
Q ss_pred CCCCc-EEEEEEEEeCCC-CCCeEEEEEEEEEeCC
Q 032014 95 IEAGN-FVLSHAETLPGY-TPPGVYTLKMKMIGKN 127 (149)
Q Consensus 95 l~~G~-~~~~~~~~ip~~-~P~g~y~v~~~l~d~~ 127 (149)
+.||+ .++...+.+|+. .+.+.-.+++++.+.+
T Consensus 69 v~~g~~~~~~v~v~~~~~~~~~~~~~i~f~v~~~~ 103 (118)
T 2r39_A 69 VEPGEVLNLPMSLGADPDKLNSAITTIQFILTDKS 103 (118)
T ss_dssp ECTTCEEEEEEEEEECGGGCSSSEEEEEEEEEEGG
T ss_pred ECCCCEEEEEEEEEEChHHccCCceeEEEEEEeCC
Confidence 68997 889999999875 5677888888888654
No 100
>2f68_X Collagen adhesin; beta barrel, domain SWAP, cell adhesion; 1.95A {Staphylococcus aureus} PDB: 2f6a_A 1amx_A
Probab=24.53 E-value=54 Score=25.22 Aligned_cols=89 Identities=7% Similarity=0.170 Sum_probs=53.4
Q ss_pred cEEEeEEEEecCCCCCCCcEEEEEEEEE-eeEecCcE-EEEEEE------E----ceEEEccCCcCCCCccCCCCCCCcE
Q 032014 33 PLKVQQIKIIPDPVVTGKPAIFNISAVT-DRSVSGGK-VMIEVR------Y----FGIRVHSETHDICEEVSCPIEAGNF 100 (149)
Q Consensus 33 ~~~i~~v~i~P~p~~~G~~~~i~~~~~~-~~~i~~~~-~~v~~~------~----~~~~~~~~~~d~C~~~~CPl~~G~~ 100 (149)
...|++++++|..+..|+.++++++|.+ +..+.+|. ..+.+= + ..+++... .. ....|=+.+|..
T Consensus 14 ~~~its~~i~~~~i~~g~~~~v~~~f~~~~~~vK~GDt~~i~LP~~~~~~~~~~~~~~~L~d~-G~--~vG~~~V~~~~v 90 (313)
T 2f68_X 14 STNVTDLTVSPSKIEDGGKTTVKMTFDDKNGKIQNGDMIKVAWPTSGTVKIEGYSKTVPLTVK-GE--QVGQAVITPDGA 90 (313)
T ss_dssp HHHEEEEEEESSEECTTEEEEEEEEEESSSSCCCTTEEEEEBCCCSSSEEEEECCEEEEEEET-TE--EEEEEEEETTEE
T ss_pred ccceeEEEEcCceecCCceEEEEEEecCCCCCCCCCCEEEEEcCCCceeeeecccccceeeeC-CE--EEEEEEEeCCEE
Confidence 4578999999998899999999999985 45677773 344321 1 11232211 10 112455566777
Q ss_pred EEEEEEEeCCCC-CCeEEEEEEEEE
Q 032014 101 VLSHAETLPGYT-PPGVYTLKMKMI 124 (149)
Q Consensus 101 ~~~~~~~ip~~~-P~g~y~v~~~l~ 124 (149)
+++++-.+.... -.|.+.+.+++.
T Consensus 91 t~TFnd~Ve~~~nI~G~~~f~~~~~ 115 (313)
T 2f68_X 91 TITFNDKVEKLSDVSGFAEFEVQGR 115 (313)
T ss_dssp EEEECGGGTTCEEEEEEEEEEEEEE
T ss_pred EEEeccccCcccccEEEEEEEEEEE
Confidence 777766666431 246665566654
No 101
>2kzw_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina mazei}
Probab=22.81 E-value=65 Score=21.96 Aligned_cols=19 Identities=16% Similarity=0.268 Sum_probs=15.6
Q ss_pred CCCeEEEEEEEEEeCCCCE
Q 032014 112 TPPGVYTLKMKMIGKNGYQ 130 (149)
Q Consensus 112 ~P~g~y~v~~~l~d~~~~~ 130 (149)
.-+|.|+|+++..|.+|..
T Consensus 111 ~~~G~YtVtLtvtn~~G~~ 129 (145)
T 2kzw_A 111 FNEGEYIVSLIVSNENDSD 129 (145)
T ss_dssp SSCEEEEEEEEEECSSCEE
T ss_pred CCCcEEEEEEEEEcCCCCe
Confidence 3579999999999988753
No 102
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=22.77 E-value=37 Score=29.42 Aligned_cols=16 Identities=6% Similarity=-0.054 Sum_probs=12.1
Q ss_pred cCCCCCCCc-EEEEEEE
Q 032014 91 VSCPIEAGN-FVLSHAE 106 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~~ 106 (149)
+.||+.||+ |+|++++
T Consensus 125 tq~~I~PG~s~tY~f~v 141 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQV 141 (742)
T ss_dssp SSSSCCTTCEECCEEEE
T ss_pred ccCcCCCCCeEEEEEEe
Confidence 469999997 6666654
No 103
>1jb0_F Photosystem 1 reaction centre subunit III; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.16.1 PDB: 3pcq_F*
Probab=22.64 E-value=22 Score=25.08 Aligned_cols=29 Identities=28% Similarity=0.465 Sum_probs=7.4
Q ss_pred CcceehhhhHHhhhhh-----cccccceeecCCC
Q 032014 1 MNRQLLLLFTFYVLVS-----SIQAIDFTYCDDE 29 (149)
Q Consensus 1 m~~~~~l~~~~~l~~~-----~~~~~~~~~C~~~ 29 (149)
|||.+.+++++.+.+. .+.....+.|.+.
T Consensus 1 Mrrl~~~~l~~~~~~~~~p~a~A~~agLtpC~es 34 (164)
T 1jb0_F 1 MRRFLALLLVLTLWLGFTPLASADVAGLVPCKDS 34 (164)
T ss_dssp -----------------------CGGGCEEGGGC
T ss_pred CchHHHHHHHHHHHHccCchhhhhhcCCccCcCC
Confidence 8888666555554442 2344568889764
No 104
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.45 E-value=1.5e+02 Score=18.49 Aligned_cols=27 Identities=15% Similarity=0.249 Sum_probs=18.9
Q ss_pred CeEEEEEEEEEeCCCCEEEEEEEEEEEe
Q 032014 114 PGVYTLKMKMIGKNGYQLTCFSFKFKIG 141 (149)
Q Consensus 114 ~g~y~v~~~l~d~~~~~i~C~~~~~~i~ 141 (149)
.|.|+++++.+|.+|..-. -.+.+.+.
T Consensus 68 ~G~y~f~LTVtD~~G~s~s-~~v~VtV~ 94 (102)
T 2yrl_A 68 VGTYVFTLTVKDERNLQSQ-SSVNVIVK 94 (102)
T ss_dssp SSEEEEEEEEEBTTCCEEE-EEEEEEEE
T ss_pred CeEEEEEEEEEeCCCCEEE-eEEEEEEc
Confidence 6899999999998876532 34444444
No 105
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=21.75 E-value=81 Score=20.97 Aligned_cols=18 Identities=28% Similarity=0.610 Sum_probs=10.8
Q ss_pred CCCeEEEEEEEEEeCCCCE
Q 032014 112 TPPGVYTLKMKMIGKNGYQ 130 (149)
Q Consensus 112 ~P~g~y~v~~~l~d~~~~~ 130 (149)
.|+|.|+++++..+ +|+.
T Consensus 78 ~~~G~Y~~~v~a~~-~g~~ 95 (138)
T 3osv_A 78 MPPGTYKFEAQTSI-DGKT 95 (138)
T ss_dssp CCSEEEEEEEEEEE-TTEE
T ss_pred CCCccEEEEEEEEc-CCeE
Confidence 56677777776653 4443
No 106
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=21.52 E-value=1.1e+02 Score=25.65 Aligned_cols=23 Identities=13% Similarity=0.215 Sum_probs=20.0
Q ss_pred EEEEEEeCCCCCCeEEEEEEEEE
Q 032014 102 LSHAETLPGYTPPGVYTLKMKMI 124 (149)
Q Consensus 102 ~~~~~~ip~~~P~g~y~v~~~l~ 124 (149)
+..++.||...+.|.|+|++...
T Consensus 167 ~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 167 LPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp EEEEEECCSSCCCSEEEEEEEET
T ss_pred EEEEEECCCccccccEEEEEEEC
Confidence 56788999999999999999863
No 107
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=21.35 E-value=1.1e+02 Score=25.77 Aligned_cols=19 Identities=32% Similarity=0.415 Sum_probs=16.4
Q ss_pred CCCCeEEEEEEEEEeCCCC
Q 032014 111 YTPPGVYTLKMKMIGKNGY 129 (149)
Q Consensus 111 ~~P~g~y~v~~~l~d~~~~ 129 (149)
.+|+|+|+++++..+.+|.
T Consensus 744 nL~pG~Y~f~V~a~~~~g~ 762 (781)
T 3v9f_A 744 NIPPGKYEFLVKARLHNQD 762 (781)
T ss_dssp SCCSEEEEEEEEEEETTSC
T ss_pred CCCCceEEEEEEEECCCCc
Confidence 3799999999999988764
No 108
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=21.16 E-value=61 Score=26.75 Aligned_cols=15 Identities=7% Similarity=0.076 Sum_probs=12.0
Q ss_pred cCCCCCCCc-EEEEEE
Q 032014 91 VSCPIEAGN-FVLSHA 105 (149)
Q Consensus 91 ~~CPl~~G~-~~~~~~ 105 (149)
..||+.||+ |+|++.
T Consensus 145 ~q~~I~PG~~~~Y~f~ 160 (612)
T 3gyr_A 145 ADNAVGFGDAQLSEYP 160 (612)
T ss_dssp GGGCBCTTCEEEEEEC
T ss_pred ccCccCCCCCEEEEEE
Confidence 589999997 777653
No 109
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14
Probab=20.17 E-value=1.6e+02 Score=19.38 Aligned_cols=14 Identities=14% Similarity=0.358 Sum_probs=7.8
Q ss_pred CCCCCc-EEEEEEEE
Q 032014 94 PIEAGN-FVLSHAET 107 (149)
Q Consensus 94 Pl~~G~-~~~~~~~~ 107 (149)
|+++|+ |++++...
T Consensus 68 ~l~~G~~Y~lsf~ak 82 (155)
T 1gui_A 68 GLYRGKTYTISFKAK 82 (155)
T ss_dssp ECCTTCEEEEEEEEE
T ss_pred EeCCCCEEEEEEEEE
Confidence 567775 55444443
No 110
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=20.03 E-value=2.1e+02 Score=19.31 Aligned_cols=15 Identities=33% Similarity=0.888 Sum_probs=11.2
Q ss_pred cCCCCC-CCcEEEEEE
Q 032014 91 VSCPIE-AGNFVLSHA 105 (149)
Q Consensus 91 ~~CPl~-~G~~~~~~~ 105 (149)
.+||+. .|.|.++++
T Consensus 4 ~~cpv~~~gd~vwkIs 19 (133)
T 3v0r_A 4 ASCPVTTEGDYVWKIS 19 (133)
T ss_dssp CCSSSCCCCTTEEEEE
T ss_pred CCCccccCCceEEEee
Confidence 479995 568888766
Done!