BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032019
MDPTQRQTPPSYSKESLIRRYKPIWRILLISNLALGGYMFAKARKKNSRVEDRKRPGPHD
EDNQATDAVSSGLTPASPLSEEPSVPPTVIEPVKVREPIPEDQQRELFKWILEEKRKVKP
KDPKEKKRIDEEKAILKQFIRAESIPQL

High Scoring Gene Products

Symbol, full name Information P value
AT1G55160 protein from Arabidopsis thaliana 8.8e-15
AT2G19530 protein from Arabidopsis thaliana 7.6e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032019
        (148 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2035731 - symbol:AT1G55160 "AT1G55160" species...   188  8.8e-15   1
TAIR|locus:2050377 - symbol:AT2G19530 "AT2G19530" species...   132  7.6e-09   1


>TAIR|locus:2035731 [details] [associations]
            symbol:AT1G55160 "AT1G55160" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] EMBL:CP002684 GO:GO:0005739 GO:GO:0009536
            IPI:IPI00938931 RefSeq:NP_001154426.1 UniGene:At.20703 PRIDE:F4HYQ1
            EnsemblPlants:AT1G55160.3 GeneID:841959 KEGG:ath:AT1G55160
            OMA:HVEANFN Uniprot:F4HYQ1
        Length = 213

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 59/155 (38%), Positives = 79/155 (50%)

Query:     9 PPSYSKESLIRRYKPIWRILLISNLALGGY-------------MFAKARK-KNSRVEDRK 54
             PP   KES  RRYK +W +LL  NLA+GG+             +F   R   +S +  R 
Sbjct:    59 PPPPPKESFARRYKYVWPLLLTVNLAVGGFCSSLDENRIVFSFIFMMLRVIYDSYLFFRT 118

Query:    55 RPGPHDEDNQATDAVSSGLTPASPLSEEPSVPPTVI-EPV--KVREPIPEDQQRELFKWI 111
             +    D   + T A SS +  A+P++ E ++  TV+ EPV  K REPIPE QQRELFKW+
Sbjct:   119 KKKDLDPVVEETAAKSSSV--AAPVTVEKTLSSTVVAEPVVIKAREPIPEKQQRELFKWM 176

Query:   112 LXXXXXXXXXXXXXXXXXXXXXAILKQFIRAESIP 146
             L                     AILKQFI +++IP
Sbjct:   177 LEEKRKVNPKNAEEKKRNDEEKAILKQFIGSKTIP 211


>TAIR|locus:2050377 [details] [associations]
            symbol:AT2G19530 "AT2G19530" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005917
            IPI:IPI00534727 PIR:H84577 RefSeq:NP_179543.1 UniGene:At.49345
            PRIDE:Q9ZUN9 DNASU:816472 EnsemblPlants:AT2G19530.1 GeneID:816472
            KEGG:ath:AT2G19530 TAIR:At2g19530 eggNOG:NOG296735
            HOGENOM:HOG000241627 OMA:IRAERIP PhylomeDB:Q9ZUN9
            ProtClustDB:CLSN2912965 ArrayExpress:Q9ZUN9 Genevestigator:Q9ZUN9
            Uniprot:Q9ZUN9
        Length = 202

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 35/108 (32%), Positives = 52/108 (48%)

Query:    42 KARKKNSRVEDRKRPGPHDEDNQATDAVSSGLTPASPLSEEPSVPPTVIEPVKV-REPIP 100
             K  ++  + ++ +   P  E+ +    +   L   +  +++        E VKV R+PIP
Sbjct:    77 KGAEETDKAKEAETAIPEKEETKLIPELDP-LFEFTDATDQSMFQTVATEHVKVARKPIP 135

Query:   101 EDQQRELFKWILXXXXXXXXXXXXXXXXXXXXXAILKQFIRAESIPQL 148
             ED+Q+ELFKWIL                     AILKQFIRAE IP+L
Sbjct:   136 EDEQKELFKWILEEKRKIEPKDRKEKKQIDEEKAILKQFIRAERIPKL 183


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      148       127   0.00091  102 3  11 23  0.43    31
                                                     29  0.40    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  542 (58 KB)
  Total size of DFA:  123 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.04u 0.17s 18.21t   Elapsed:  00:00:01
  Total cpu time:  18.04u 0.17s 18.21t   Elapsed:  00:00:01
  Start:  Fri May 10 11:34:01 2013   End:  Fri May 10 11:34:02 2013

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