Query 032021
Match_columns 148
No_of_seqs 19 out of 21
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 13:36:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032021.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032021hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k47a2 d.58.26.4 (A:195-329) 62.8 5.6 0.00041 26.1 4.6 43 85-135 38-80 (135)
2 d1tqga_ a.24.10.3 (A:) Chemota 54.6 20 0.0015 22.0 6.1 42 85-127 63-104 (105)
3 d1orja_ a.24.19.1 (A:) Flagell 46.7 21 0.0015 23.5 5.4 41 89-133 29-72 (126)
4 d2pv7a1 a.100.1.12 (A:244-371) 36.8 31 0.0022 22.2 5.0 34 85-126 80-113 (128)
5 d1k3ea_ d.198.1.1 (A:) Secreti 36.7 11 0.00079 24.9 2.6 39 105-147 106-144 (146)
6 d1yvia1 a.24.10.2 (A:2-143) Hi 35.6 30 0.0022 22.6 4.8 42 85-127 93-134 (142)
7 d1iq8a1 c.1.20.1 (A:6-360) Arc 33.4 21 0.0015 27.4 4.2 51 83-148 305-355 (355)
8 d1i5na_ a.24.10.3 (A:) Chemota 32.0 54 0.004 20.4 6.5 60 85-145 62-121 (128)
9 d1r5ya_ c.1.20.1 (A:) Queosine 31.3 28 0.0021 26.9 4.7 29 82-114 341-369 (372)
10 d1wa8b1 a.25.3.1 (B:602-695) E 29.7 32 0.0023 20.9 3.9 45 89-134 35-79 (94)
11 d1o3xa_ a.7.8.1 (A:) ADP-ribos 29.1 43 0.0031 21.9 4.7 33 99-131 48-80 (112)
12 d1ivsa1 a.2.7.3 (A:797-862) Va 29.0 27 0.002 20.6 3.3 43 105-147 2-51 (66)
13 d1wr6a1 a.7.8.1 (A:211-300) AD 28.6 56 0.0041 20.5 5.1 41 89-129 15-58 (90)
14 d1tjna_ c.92.1.3 (A:) Sirohydr 28.0 16 0.0011 23.9 2.2 22 96-117 8-29 (125)
15 d2choa1 a.246.1.1 (A:437-590) 26.3 56 0.0041 22.5 5.1 47 85-135 7-55 (154)
16 d1vh6a_ a.24.19.1 (A:) Flagell 26.2 55 0.004 20.4 4.7 35 89-131 18-52 (102)
17 d1hw1a2 a.78.1.1 (A:79-230) Fa 25.2 74 0.0054 19.8 6.2 36 90-129 116-151 (152)
18 d1h99a2 a.142.1.1 (A:169-275) 24.9 49 0.0036 20.2 4.2 48 76-129 33-81 (107)
19 d2omzb1 b.1.6.1 (B:-2-101) E-c 24.0 14 0.00099 22.9 1.3 10 6-16 1-10 (104)
20 d2hmza_ a.24.4.1 (A:) Hemeryth 22.9 43 0.0031 21.5 3.7 42 82-127 25-66 (113)
21 d1wa8a1 a.25.3.1 (A:1-99) ESAT 21.2 24 0.0017 21.4 2.0 35 103-137 48-82 (99)
22 d2cbia1 a.246.1.1 (A:496-624) 20.6 87 0.0063 21.1 5.1 41 85-129 6-47 (129)
No 1
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]}
Probab=62.77 E-value=5.6 Score=26.12 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhhhhcccccc
Q 032021 85 LLHLMENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSISESLDTKAM 135 (148)
Q Consensus 85 L~~lve~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis~sl~tk~~ 135 (148)
+=.+|+.+.+|+++|+ +.+|..-..+...+|+.+..++++..+
T Consensus 38 ~~~~v~~~~~al~~~d--------~~~l~~~m~~~~~ll~~l~~~i~~~~l 80 (135)
T d1k47a2 38 SKETVVSLVEALEQGK--------SEKIIEQVEVASKLLEGLSTDIYTPLL 80 (135)
T ss_dssp HHHHHHHHHHHHHHTC--------HHHHHHHHHHHHHHHHHHCTTTSCHHH
T ss_pred HHHHHHHHHHHHHhCC--------HHHHHHHHHHHHHHHHhccccCCChHH
Confidence 3456888999999985 344455556666788888777666543
No 2
>d1tqga_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Thermotoga maritima [TaxId: 2336]}
Probab=54.62 E-value=20 Score=22.02 Aligned_cols=42 Identities=19% Similarity=0.324 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhh
Q 032021 85 LLHLMENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSIS 127 (148)
Q Consensus 85 L~~lve~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis 127 (148)
|-|-+|.+-+++..|...-. ++++.-|..-++....+|++|.
T Consensus 63 lah~lE~~l~~~~~~~~~~~-~~~~~~l~~~~d~l~~~l~~l~ 104 (105)
T d1tqga_ 63 LCHTLENILDKARNSEIKIT-SDLLDKIFAGVDMITRMVDKIV 104 (105)
T ss_dssp HHHHHHHHHHHHHTTSSCCC-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCC-HHHHHHHHHHHHHHHHHHHHhh
Confidence 56778888888888876554 7788888888898888888874
No 3
>d1orja_ a.24.19.1 (A:) Flagellar export chaperone FliS {Aquifex aeolicus [TaxId: 63363]}
Probab=46.70 E-value=21 Score=23.47 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=27.8
Q ss_pred HHHHHH---HHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhhhhcccc
Q 032021 89 MENLAD---AIENGTRDQQSDALVNELNNHFEKCQQLLSSISESLDTK 133 (148)
Q Consensus 89 ve~Lad---aie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis~sl~tk 133 (148)
+++|.. +++.|.. +.-..+...+|.||..||..+.++|+-+
T Consensus 29 i~~l~~a~~a~~~~d~----~~~~~~~~~~l~ka~~Ii~~L~~~Ld~e 72 (126)
T d1orja_ 29 IECLERAIEIYDQVNE----LEKRKEFVENIDRVYDIISALKSFLDHE 72 (126)
T ss_dssp HHHHHHHHHTGGGTTS----HHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 455544 4455533 3345666788999999999988887655
No 4
>d2pv7a1 a.100.1.12 (A:244-371) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}
Probab=36.79 E-value=31 Score=22.20 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHh
Q 032021 85 LLHLMENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSI 126 (148)
Q Consensus 85 L~~lve~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSi 126 (148)
+.--++.|+++|++|++ ++|...|+++...+...
T Consensus 80 ~~~~l~~l~~~i~~~D~--------~~l~~~~~~a~~~~~~~ 113 (128)
T d2pv7a1 80 LKQTYDEALTFFENNDR--------QGFIDAFHKVRDWFGDY 113 (128)
T ss_dssp HHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHcCCH--------HHHHHHHHHHHHHHHHh
Confidence 55667788888888874 45566677777776654
No 5
>d1k3ea_ d.198.1.1 (A:) Secretion chaperone CesT {Escherichia coli [TaxId: 562]}
Probab=36.66 E-value=11 Score=24.86 Aligned_cols=39 Identities=23% Similarity=0.352 Sum_probs=20.6
Q ss_pred hHHHHHHHHHhHHHHHHHHHHhhhhcccccceehhhhhhhhhc
Q 032021 105 SDALVNELNNHFEKCQQLLSSISESLDTKAMTVEGQRRKLEER 147 (148)
Q Consensus 105 sDaLv~EL~s~FekcQQLLnSis~sl~tk~~TVegQk~kLEE~ 147 (148)
.++|.+.|.+--+ -...+...|....+|++..++|.||.
T Consensus 106 ~~~L~~~le~fI~----~~e~~r~~L~~~~~~~~~~~~~~~~~ 144 (146)
T d1k3ea_ 106 PEKLENEIEVVVK----SMENLYLVLHNQGITLENEHMKIEEI 144 (146)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHTTTCCC-----CEEEE
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHhccCCCcccccchhhc
Confidence 3444444443333 33445666778899999999999984
No 6
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=35.60 E-value=30 Score=22.63 Aligned_cols=42 Identities=10% Similarity=0.124 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhh
Q 032021 85 LLHLMENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSIS 127 (148)
Q Consensus 85 L~~lve~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis 127 (148)
|.-+...|-.+..+|..|. -.+++.+|...|++..+-|+.+-
T Consensus 93 l~~~~~~lE~~~~~~~~~~-~~~~~~~L~~e~~~l~~~L~~~l 134 (142)
T d1yvia1 93 VKFTCMQFRQFCQDKSRDG-CLMALAVVRNDFYDLRNKFQTML 134 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666667787774 46789999999999988887743
No 7
>d1iq8a1 c.1.20.1 (A:6-360) Archaeosine tRNA-guanine transglycosylase, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=33.41 E-value=21 Score=27.42 Aligned_cols=51 Identities=20% Similarity=0.181 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhhhhcccccceehhhhhhhhhcC
Q 032021 83 FHLLHLMENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSISESLDTKAMTVEGQRRKLEERN 148 (148)
Q Consensus 83 FhL~~lve~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis~sl~tk~~TVegQk~kLEE~e 148 (148)
+++..+++.+.++|++|+ .+++|+| |.+.-.-|- +.-..++.+..-|||+|
T Consensus 305 ~~~~~l~~~iR~aI~~g~----f~~~~e~----~~~~~p~~~-------~~~~~l~~~~~~~~~~~ 355 (355)
T d1iq8a1 305 WVIKEEIKRVKQAIKEGE----LWRLVDE----RARSHPKLY-------SAYKRLLEHYTFLEEFE 355 (355)
T ss_dssp HHHHHHHHHHHHHHHHTC----HHHHHHH----HHTTCHHHH-------HHHHHHHHCHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCC----HHHHHHH----HHHhCHHHH-------HHHHHHHHHHHHHhhcC
Confidence 678889999999999997 3556655 222111111 11223566777788775
No 8
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=32.04 E-value=54 Score=20.42 Aligned_cols=60 Identities=25% Similarity=0.271 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhhhhcccccceehhhhhhhh
Q 032021 85 LLHLMENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSISESLDTKAMTVEGQRRKLE 145 (148)
Q Consensus 85 L~~lve~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis~sl~tk~~TVegQk~kLE 145 (148)
|-|-+|.+-+.+..|...-+ .+++.-|..-++.-..+|..+...-...+..++.=.+.|+
T Consensus 62 lah~lE~~l~~lr~~~~~~~-~~~~~~l~~~~d~l~~~l~~~~~~~~~~~~~~~~l~~~L~ 121 (128)
T d1i5na_ 62 TTHLMENLLDEARRGEMQLN-TDIINLFLETKDIMQEQLDAYKNSEEPDAASFEYICNALR 121 (128)
T ss_dssp HHHHHHHHHHHHHTTSSCCC-HHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCC-HHHHHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Confidence 56778888888877766544 6677878888888888888887653333333333334443
No 9
>d1r5ya_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
Probab=31.31 E-value=28 Score=26.85 Aligned_cols=29 Identities=17% Similarity=0.343 Sum_probs=23.2
Q ss_pred hhhHHHHHHHHHHHHhcCCCCcchHHHHHHHHH
Q 032021 82 NFHLLHLMENLADAIENGTRDQQSDALVNELNN 114 (148)
Q Consensus 82 hFhL~~lve~Ladaie~GtRDQ~sDaLv~EL~s 114 (148)
++++..+++.+.+||++|+ .++++++...
T Consensus 341 l~~~~~~~~~iR~aI~~g~----f~~~~~~f~~ 369 (372)
T d1r5ya_ 341 IAFYQQLMQKIRDSISEGR----FSQFAQDFRA 369 (372)
T ss_dssp HHHHHHHHHHHHHHHHTTC----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC----HHHHHHHHHH
Confidence 6788899999999999997 5666666543
No 10
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.67 E-value=32 Score=20.89 Aligned_cols=45 Identities=9% Similarity=0.192 Sum_probs=31.6
Q ss_pred HHHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhhhhccccc
Q 032021 89 MENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSISESLDTKA 134 (148)
Q Consensus 89 ve~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis~sl~tk~ 134 (148)
|+.|...-+...++- .+.+.++....+++-.++|..|+..|.+-+
T Consensus 35 ~~~l~~~W~G~A~~a-f~~~~~~W~~~~~~l~~~L~~i~~~l~~~~ 79 (94)
T d1wa8b1 35 LTKLAAAWGGSGSEA-YQGVQQKWDATATELNNALQNLARTISEAG 79 (94)
T ss_dssp HHHHGGGGSCSSSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHhcchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344443333344443 678888889999999999999998876543
No 11
>d1o3xa_ a.7.8.1 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.13 E-value=43 Score=21.94 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=25.5
Q ss_pred CCCCcchHHHHHHHHHhHHHHHHHHHHhhhhcc
Q 032021 99 GTRDQQSDALVNELNNHFEKCQQLLSSISESLD 131 (148)
Q Consensus 99 GtRDQ~sDaLv~EL~s~FekcQQLLnSis~sl~ 131 (148)
|+-+...++|+.||...-.+++..|..+..+.+
T Consensus 48 ~~~~~~~~ell~eL~~~c~~~qp~i~~li~~~~ 80 (112)
T d1o3xa_ 48 GAAAGSSEDLMKELYQRCERMRPTLFRLASDTE 80 (112)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 344445668999999999999999988876543
No 12
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=28.95 E-value=27 Score=20.57 Aligned_cols=43 Identities=14% Similarity=0.240 Sum_probs=35.3
Q ss_pred hHHHHHHHHHhHHHHHHHHHHhhhhcccccc-------eehhhhhhhhhc
Q 032021 105 SDALVNELNNHFEKCQQLLSSISESLDTKAM-------TVEGQRRKLEER 147 (148)
Q Consensus 105 sDaLv~EL~s~FekcQQLLnSis~sl~tk~~-------TVegQk~kLEE~ 147 (148)
.|+-+..|....++.+.-+..+.+-|+.+.. -|+..|.+|+++
T Consensus 2 ~~~E~~RL~K~l~kl~~~i~~~~~kL~N~~F~~kAP~~Vv~~~k~kl~~~ 51 (66)
T d1ivsa1 2 VEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKEN 51 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHhCCHHHHHHHHHHHHHH
Confidence 4677888999999999999999999988766 577778777764
No 13
>d1wr6a1 a.7.8.1 (A:211-300) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.59 E-value=56 Score=20.49 Aligned_cols=41 Identities=15% Similarity=0.240 Sum_probs=29.8
Q ss_pred HHHHHHHHhc---CCCCcchHHHHHHHHHhHHHHHHHHHHhhhh
Q 032021 89 MENLADAIEN---GTRDQQSDALVNELNNHFEKCQQLLSSISES 129 (148)
Q Consensus 89 ve~Ladaie~---GtRDQ~sDaLv~EL~s~FekcQQLLnSis~s 129 (148)
|+=|.+.+.+ |......++|+.||...-.+++..|-.+..+
T Consensus 15 ~~lL~eML~~~~p~~~~~~~~eli~eL~~~C~~~qp~i~~li~~ 58 (90)
T d1wr6a1 15 VRLLSEMLLHYSQEDSSDGDRELMKELFDQCENKRRTLFKLASE 58 (90)
T ss_dssp HHHHHHHTTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445555555 5566666799999999999888888877654
No 14
>d1tjna_ c.92.1.3 (A:) Sirohydrochlorin cobaltochelatase CbiX {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=28.03 E-value=16 Score=23.86 Aligned_cols=22 Identities=9% Similarity=0.225 Sum_probs=17.8
Q ss_pred HhcCCCCcchHHHHHHHHHhHH
Q 032021 96 IENGTRDQQSDALVNELNNHFE 117 (148)
Q Consensus 96 ie~GtRDQ~sDaLv~EL~s~Fe 117 (148)
|.+|+||.++.+.+.++.....
T Consensus 8 v~HGSr~~~~~~~~~~~a~~l~ 29 (125)
T d1tjna_ 8 VGHGSQLNHYREVMELHRKRIE 29 (125)
T ss_dssp EECCTTSTTHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHHH
Confidence 5689999998888888876664
No 15
>d2choa1 a.246.1.1 (A:437-590) Glucosaminidase GH84 post-catalytic domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=26.31 E-value=56 Score=22.51 Aligned_cols=47 Identities=15% Similarity=0.267 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhcCCC--CcchHHHHHHHHHhHHHHHHHHHHhhhhcccccc
Q 032021 85 LLHLMENLADAIENGTR--DQQSDALVNELNNHFEKCQQLLSSISESLDTKAM 135 (148)
Q Consensus 85 L~~lve~Ladaie~GtR--DQ~sDaLv~EL~s~FekcQQLLnSis~sl~tk~~ 135 (148)
|-|+++++..++++|.+ |...++|++| |++-+.--+-|-....+|.+
T Consensus 7 L~~~l~af~~~~~~g~~~~~~a~~~L~~e----F~~i~~A~~~~~~~~~N~~l 55 (154)
T d2choa1 7 IQPAAERFLKAFKEGKNYDKADFETLQYT----FERMKESADILLMNTENKPL 55 (154)
T ss_dssp GHHHHHHHHHHHHHTCCCCHHHHHHHHHH----HHHHHHHHHHHHHCCSSHHH
T ss_pred HHHHHHHHHHHHHcCCCccHHHHHHHHHH----HHHHHHHHHHHHhcCCCHhH
Confidence 67899999999999865 4444455554 55544444444444444444
No 16
>d1vh6a_ a.24.19.1 (A:) Flagellar export chaperone FliS {Bacillus subtilis [TaxId: 1423]}
Probab=26.18 E-value=55 Score=20.42 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=24.4
Q ss_pred HHHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhhhhcc
Q 032021 89 MENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSISESLD 131 (148)
Q Consensus 89 ve~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis~sl~ 131 (148)
++....+|++|+. .+-..+|.||..++..+..+|.
T Consensus 18 l~~a~~ai~~~d~--------~~~~~~~~ka~~Ii~~L~~sLd 52 (102)
T d1vh6a_ 18 IRLAAQAIENDDM--------ERKNENLIKAQNIIQELNFTLN 52 (102)
T ss_dssp HHHHHHHHHTTCH--------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCH--------HHHHHHHHHHHHHHHHHHhccc
Confidence 3444556676653 4456788899999988887775
No 17
>d1hw1a2 a.78.1.1 (A:79-230) Fatty acid responsive transcription factor FadR, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.19 E-value=74 Score=19.76 Aligned_cols=36 Identities=8% Similarity=0.210 Sum_probs=25.0
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhhhh
Q 032021 90 ENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSISES 129 (148)
Q Consensus 90 e~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis~s 129 (148)
..|.+||++|+.| .-.+-+..|.+++-.+.+.+.++
T Consensus 116 ~~Il~Ai~~~D~e----~A~~~mr~Hi~~s~~~w~~l~~~ 151 (152)
T d1hw1a2 116 HKLSALCSEGAHD----QVYETVRRYGHESGEIWHRMQKN 151 (152)
T ss_dssp HHHHHHHHHTCSH----HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHH----HHHHHHHHHHHHHHHHHHHHHhc
Confidence 6788999999764 44555567777776666666544
No 18
>d1h99a2 a.142.1.1 (A:169-275) Transcriptional antiterminator LicT {Bacillus subtilis [TaxId: 1423]}
Probab=24.90 E-value=49 Score=20.15 Aligned_cols=48 Identities=15% Similarity=0.297 Sum_probs=27.3
Q ss_pred HHhhhhhhhHHHHHHHHHHHHhcCCCCcc-hHHHHHHHHHhHHHHHHHHHHhhhh
Q 032021 76 HQSLASNFHLLHLMENLADAIENGTRDQQ-SDALVNELNNHFEKCQQLLSSISES 129 (148)
Q Consensus 76 hqsLAShFhL~~lve~Ladaie~GtRDQ~-sDaLv~EL~s~FekcQQLLnSis~s 129 (148)
+..|+.| |-.+++++.. |..-.. .+.|++++...|-++=.+...|..-
T Consensus 33 y~rl~~H--L~~~i~R~~~----~~~~~~~~n~l~~~ik~~yp~~~~~a~~i~~~ 81 (107)
T d1h99a2 33 YYRFVTD--LKFFAQRLFN----GTHMESEDDFLLDTVKEKYHRAYECTKKIQTY 81 (107)
T ss_dssp HHHHHHH--HHHHHHHHHH----TCCCC--CTHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHHHHHHHHh----cCccccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666 6677777764 433221 1568888877665544444444433
No 19
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.05 E-value=14 Score=22.90 Aligned_cols=10 Identities=50% Similarity=1.179 Sum_probs=6.4
Q ss_pred CCCcceeccCC
Q 032021 6 GSGSWNMMPSI 16 (148)
Q Consensus 6 ~gGSwtMiPs~ 16 (148)
+.||| |+|+.
T Consensus 1 p~~~w-~~~pi 10 (104)
T d2omzb1 1 PLGSW-VIPPI 10 (104)
T ss_dssp CSTTE-ECCCC
T ss_pred CCCcc-cCCcE
Confidence 57999 45544
No 20
>d2hmza_ a.24.4.1 (A:) Hemerythrin {Sipunculid worm (Themiste dyscritum) [TaxId: 6436]}
Probab=22.93 E-value=43 Score=21.48 Aligned_cols=42 Identities=21% Similarity=0.183 Sum_probs=31.5
Q ss_pred hhhHHHHHHHHHHHHhcCCCCcchHHHHHHHHHhHHHHHHHHHHhh
Q 032021 82 NFHLLHLMENLADAIENGTRDQQSDALVNELNNHFEKCQQLLSSIS 127 (148)
Q Consensus 82 hFhL~~lve~Ladaie~GtRDQ~sDaLv~EL~s~FekcQQLLnSis 127 (148)
|=.|+-+|.+|.++...+ .-++|+.....||..=+.++..+.
T Consensus 25 H~~l~~~in~l~~~~~~~----~l~~L~~y~~~HF~~EE~lM~~~~ 66 (113)
T d2hmza_ 25 HKTLFNGILLLSQADNAD----HLNELRRCTGKHFLNEQQLMQASQ 66 (113)
T ss_dssp HHHHHHHHHHHHHCCSHH----HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 445777888888776554 357788888999999999888753
No 21
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.18 E-value=24 Score=21.35 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=28.1
Q ss_pred cchHHHHHHHHHhHHHHHHHHHHhhhhccccccee
Q 032021 103 QQSDALVNELNNHFEKCQQLLSSISESLDTKAMTV 137 (148)
Q Consensus 103 Q~sDaLv~EL~s~FekcQQLLnSis~sl~tk~~TV 137 (148)
..+++..+++...+.+-.++|..|+..|.+-+-+.
T Consensus 48 ~af~~~~~~w~~~~~~l~~~L~~i~~~L~~aa~~y 82 (99)
T d1wa8a1 48 TAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQY 82 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677888889999999999999999887655444
No 22
>d2cbia1 a.246.1.1 (A:496-624) Hyaluronidase, post-catalytic domain 3 {Clostridium perfringens [TaxId: 1502]}
Probab=20.58 E-value=87 Score=21.08 Aligned_cols=41 Identities=15% Similarity=0.293 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcCC-CCcchHHHHHHHHHhHHHHHHHHHHhhhh
Q 032021 85 LLHLMENLADAIENGT-RDQQSDALVNELNNHFEKCQQLLSSISES 129 (148)
Q Consensus 85 L~~lve~Ladaie~Gt-RDQ~sDaLv~EL~s~FekcQQLLnSis~s 129 (148)
|=|+++.+.+++++|+ .+-. +..|..-|++-+.--+-|-..
T Consensus 6 L~~~l~~f~~kl~~G~~~~a~----~~~L~~eF~~i~~A~~~~r~~ 47 (129)
T d2cbia1 6 LRAKMDELWNKLSSKEDASAL----IEELYGEFARMEEACNNLKAN 47 (129)
T ss_dssp HHHHHHHHHHHHTTTCCCHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCchHHH----HHHHHHHHHHHHHHHHHHHhc
Confidence 5588999999999996 4333 444455555544444444333
Done!