Query 032024
Match_columns 148
No_of_seqs 31 out of 33
Neff 2.0
Searched_HMMs 29240
Date Mon Mar 25 13:40:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032024.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032024hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ecm_A Endo-oxabicyclic transi 69.6 1.5 5.1E-05 30.2 1.0 24 88-113 1-24 (109)
2 3euj_A Chromosome partition pr 65.5 2.7 9.1E-05 36.3 2.0 58 71-131 232-295 (483)
3 3na7_A HP0958; flagellar bioge 60.5 37 0.0013 26.2 7.4 55 51-105 107-161 (256)
4 3pkr_A FLIG, flagellar motor s 56.3 12 0.00041 30.5 4.2 52 59-115 217-268 (279)
5 4fhr_B Flagellar motor switch 56.0 13 0.00044 28.9 4.2 48 59-111 160-207 (216)
6 2ke4_A CDC42-interacting prote 53.8 29 0.00099 24.5 5.4 52 61-112 17-80 (98)
7 1ez3_A Syntaxin-1A; three heli 53.4 11 0.00037 25.5 3.0 65 45-110 9-77 (127)
8 1fio_A SSO1 protein; four heli 51.2 24 0.00081 25.4 4.7 28 80-107 46-73 (196)
9 3hjl_A Flagellar motor switch 47.6 20 0.00067 29.7 4.2 48 59-111 273-320 (329)
10 3oja_B Anopheles plasmodium-re 46.1 46 0.0016 27.2 6.1 45 89-133 539-588 (597)
11 2d8d_A Aroag, phospho-2-dehydr 42.8 8.2 0.00028 25.5 1.0 19 95-113 4-22 (90)
12 3oja_A Leucine-rich immune mol 40.7 1.1E+02 0.0037 24.7 7.5 54 52-105 378-446 (487)
13 1jzp_A Skeletal dihydropydrine 40.3 16 0.00056 21.2 1.9 15 45-59 3-17 (26)
14 3rmi_A Chorismate mutase prote 40.2 12 0.00042 26.4 1.6 22 92-113 10-31 (114)
15 2gtv_X CM, chorismate mutase; 40.1 8.4 0.00029 27.3 0.8 17 95-111 4-20 (104)
16 1ez3_A Syntaxin-1A; three heli 37.9 89 0.003 20.9 7.7 53 64-120 17-69 (127)
17 3ljc_A ATP-dependent protease 35.4 1E+02 0.0035 23.2 6.2 42 45-86 205-249 (252)
18 2zqm_A Prefoldin beta subunit 35.0 70 0.0024 21.2 4.7 62 63-124 24-100 (117)
19 1q08_A Zn(II)-responsive regul 33.4 59 0.002 20.8 4.0 30 59-88 39-68 (99)
20 3iv1_A Tumor susceptibility ge 32.5 80 0.0027 21.9 4.8 50 60-109 12-68 (78)
21 2vkl_A RV0948C/MT0975; helical 31.7 13 0.00044 25.3 0.6 23 91-113 9-31 (90)
22 1ybz_A Chorismate mutase; cons 29.7 21 0.00071 24.5 1.4 20 95-114 18-37 (91)
23 2e7s_A RAB guanine nucleotide 29.4 1.8E+02 0.0062 21.9 8.5 73 38-111 12-113 (135)
24 2ve7_C Kinetochore protein NUF 29.3 74 0.0025 25.1 4.7 64 59-126 138-208 (250)
25 1q06_A Transcriptional regulat 27.8 66 0.0022 22.5 3.8 32 59-90 79-110 (135)
26 3axj_A GM27569P, translin; tra 27.7 1.5E+02 0.0051 23.4 6.2 39 44-83 22-60 (249)
27 1go4_E MAD1 (mitotic arrest de 27.2 31 0.0011 24.9 2.0 14 93-106 25-38 (100)
28 3r2p_A Apolipoprotein A-I; amp 27.2 1.8E+02 0.0063 21.2 6.5 59 59-120 93-152 (185)
29 2lw1_A ABC transporter ATP-bin 27.0 54 0.0019 21.8 3.1 26 64-89 61-86 (89)
30 3pbf_A Pulmonary surfactant-as 26.7 30 0.001 23.0 1.7 34 84-118 6-39 (148)
31 3he5_A Synzip1; heterodimeric 26.5 28 0.00095 22.7 1.4 14 91-104 35-48 (49)
32 3oja_B Anopheles plasmodium-re 26.2 2.6E+02 0.009 22.7 9.4 31 83-113 547-577 (597)
33 2wuj_A Septum site-determining 25.4 72 0.0025 20.1 3.3 28 78-109 29-56 (57)
34 2ctr_A DNAJ homolog subfamily 24.9 78 0.0027 20.4 3.5 47 49-95 20-66 (88)
35 2ccy_A Cytochrome C; electron 24.3 29 0.001 24.3 1.4 44 75-118 68-119 (128)
36 3hnw_A Uncharacterized protein 24.2 86 0.0029 23.0 3.9 51 63-113 79-129 (138)
37 1s94_A S-syntaxin; three helix 24.2 1.9E+02 0.0065 20.7 5.8 34 77-110 75-108 (180)
38 3de8_A Soluble cytochrome B562 24.0 25 0.00086 23.7 1.0 48 75-129 52-104 (106)
39 1fxk_A Prefoldin; archaeal pro 24.0 1.5E+02 0.0052 19.2 4.8 61 63-123 19-94 (107)
40 3hd7_B Syntaxin-1A; membrane p 23.8 1.8E+02 0.0062 20.0 6.0 68 37-112 7-74 (109)
41 2l1q_A Liver-expressed antimic 23.5 18 0.00061 23.0 0.1 15 110-127 10-24 (40)
42 3ret_A Salicylate biosynthesis 23.3 29 0.001 23.5 1.2 19 95-113 9-27 (101)
43 2dfs_A Myosin-5A; myosin-V, in 23.3 3.7E+02 0.013 25.4 8.9 34 80-113 1016-1049(1080)
44 3gp4_A Transcriptional regulat 22.8 2.1E+02 0.007 20.2 5.7 39 59-97 81-119 (142)
45 2i1j_A Moesin; FERM, coiled-co 22.7 28 0.00096 30.4 1.2 59 65-123 369-434 (575)
46 2eqb_B RAB guanine nucleotide 22.4 2.2E+02 0.0075 20.4 8.3 36 75-110 46-92 (97)
47 1t06_A Hypothetical protein; s 22.3 49 0.0017 25.1 2.4 19 78-96 3-21 (235)
48 3jxy_A Alkylpurine DNA glycosy 22.2 48 0.0017 24.9 2.3 17 79-95 7-23 (232)
49 1wvt_A Hypothetical protein ST 21.7 1.5E+02 0.0051 22.5 5.0 22 94-115 78-99 (172)
50 3trt_A Vimentin; cytoskeleton, 21.1 1.2E+02 0.0042 19.2 3.8 65 41-112 9-74 (77)
No 1
>1ecm_A Endo-oxabicyclic transition state analogue; P-protein, chorismate mutase domain, chorismate mutase; HET: TSA; 2.20A {Escherichia coli} SCOP: a.130.1.1
Probab=69.65 E-value=1.5 Score=30.17 Aligned_cols=24 Identities=21% Similarity=0.466 Sum_probs=16.4
Q ss_pred ccchhHHHHHHHHHHHhhhhcccccc
Q 032024 88 LADPMRKEVAVVRKKIDSVNKELKPL 113 (148)
Q Consensus 88 laDPmRKEVa~VRKkID~vNreLKPL 113 (148)
|+|| .+++.+|+.||.++++|=-|
T Consensus 1 M~~~--~~L~~lR~~ID~iD~~L~~L 24 (109)
T 1ecm_A 1 MTSE--NPLLALREKISALDEKLLAL 24 (109)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHH
T ss_pred CCcH--HHHHHHHHHHHHHHHHHHHH
Confidence 5666 35888999999999988655
No 2
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=65.50 E-value=2.7 Score=36.34 Aligned_cols=58 Identities=12% Similarity=0.106 Sum_probs=34.8
Q ss_pred hHHHHhhHHHHHHHHH------hccchhHHHHHHHHHHHhhhhcccccchhhhhhhccccccccCCC
Q 032024 71 VEEETKRLATIREELE------ALADPMRKEVAVVRKKIDSVNKELKPLGHTCQKKTYDNVCHRKEN 131 (148)
Q Consensus 71 vEEETkRLA~IrEELE------~laDPmRKEVa~VRKkID~vNreLKPLgqtCqKKEkEY~~~~~~~ 131 (148)
+++-...|.+.|.||- .++--+|+.+..++++|+.+|+.|+-+.=. .++.|.|.-.++
T Consensus 232 ~q~~~~~~~~~r~~~~~~~~~~~~~~~Lr~~i~~~~~~i~~LN~~L~~~~Fg---~~~~y~f~~~~~ 295 (483)
T 3euj_A 232 FQDMEAALRENSGGSGGSISAESVANILRKTIQREQNRILQLNQGLQNIAFG---QVKGVRLVVNIR 295 (483)
T ss_dssp HHC-----------------CHHHHHHHHHHHHHHHHHHHHHGGGGSSCCBT---TEEEEEEEEEEC
T ss_pred HHHHHHHHHHhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---CCcEEEEEEeeC
Confidence 3444467777888875 566789999999999999999999865422 566688877664
No 3
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=60.49 E-value=37 Score=26.15 Aligned_cols=55 Identities=9% Similarity=0.189 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHHhh
Q 032024 51 EEIEKKKLEVREKVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDS 105 (148)
Q Consensus 51 EEIERkKmEVReKVqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~VRKkID~ 105 (148)
...|..-.++-+++...-..+++....|+.+..+|+..-.-...+++.+.+.++.
T Consensus 107 ~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~e~~~e~~~ 161 (256)
T 3na7_A 107 NQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQI 161 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555544444444555555555555544444444444444444333
No 4
>3pkr_A FLIG, flagellar motor switch protein; FLIF, FLIM, MOTA, motor prote; 2.60A {Helicobacter pylori} PDB: 3usw_A 3pl4_A 3usy_A
Probab=56.34 E-value=12 Score=30.52 Aligned_cols=52 Identities=21% Similarity=0.328 Sum_probs=41.1
Q ss_pred HHHHHHHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhcccccchh
Q 032024 59 EVREKVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDSVNKELKPLGH 115 (148)
Q Consensus 59 EVReKVqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreLKPLgq 115 (148)
+||++++.-+.. +.=..|++|||.||-.-.++|+..+++|=.+=|.|---|.
T Consensus 217 elrekil~nmS~-----Raa~~l~eele~~GpVr~~dVE~Aq~~Iv~~~R~L~e~Ge 268 (279)
T 3pkr_A 217 DLTDKFLNNMSS-----RAAEQFVEEMQYLGAVKIKDVDVAQRKIIEIVQSLQEKGV 268 (279)
T ss_dssp HHHHHHHTTSCH-----HHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCH-----HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 678999888752 3445689999999988889999999999887777654443
No 5
>4fhr_B Flagellar motor switch protein FLIG; motor protein; 1.93A {Thermotoga maritima} PDB: 1lkv_X 3ajc_A 1qc7_A 3soh_B
Probab=55.99 E-value=13 Score=28.91 Aligned_cols=48 Identities=25% Similarity=0.411 Sum_probs=36.9
Q ss_pred HHHHHHHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhcccc
Q 032024 59 EVREKVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDSVNKELK 111 (148)
Q Consensus 59 EVReKVqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreLK 111 (148)
+|+++++.-+. .|.=+.|++|||.+|---.+||...||.|=.+=|.|-
T Consensus 160 e~~e~il~nmS-----~Raa~~l~ee~e~~gpvr~~dVe~Aq~~Iv~~~r~L~ 207 (216)
T 4fhr_B 160 ELKEKIFKNMS-----KRAAALLKDELEYMGPVRLKDVEEAQQKIINIIRRLE 207 (216)
T ss_dssp HHHHHHHTTSC-----HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-----HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 57888877764 2344578999999997677999999999966656553
No 6
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=53.82 E-value=29 Score=24.46 Aligned_cols=52 Identities=23% Similarity=0.404 Sum_probs=38.2
Q ss_pred HHHHHHHhhhhHHHHhhHHHHHHHHH----------hccchhH--HHHHHHHHHHhhhhccccc
Q 032024 61 REKVQAHLGRVEEETKRLATIREELE----------ALADPMR--KEVAVVRKKIDSVNKELKP 112 (148)
Q Consensus 61 ReKVqaqLGRvEEETkRLA~IrEELE----------~laDPmR--KEVa~VRKkID~vNreLKP 112 (148)
|.++++.|.+++.+-.+-..=|+-|+ .||||+- .+++.+.++||.+.-+|.=
T Consensus 17 kkkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~~el~K 80 (98)
T 2ke4_A 17 RKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLKLEVQK 80 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777777777777777777776 4688875 5677888999998877743
No 7
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=53.43 E-value=11 Score=25.53 Aligned_cols=65 Identities=26% Similarity=0.361 Sum_probs=38.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhhHHH----HhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhccc
Q 032024 45 TFRAKEEEIEKKKLEVREKVQAHLGRVEEE----TKRLATIREELEALADPMRKEVAVVRKKIDSVNKEL 110 (148)
Q Consensus 45 ~FrAKEEEIERkKmEVReKVqaqLGRvEEE----TkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreL 110 (148)
.|-..=++|..-=..++..|. .|+..=+. +.....++++|+.+.+-..+=...|+.+|..+.++.
T Consensus 9 ~F~~~v~~I~~~i~~i~~~v~-~l~~~~~~~L~~~~~~~~~~~~l~~l~~~i~~~a~~ik~~Lk~l~~~~ 77 (127)
T 1ez3_A 9 EFFEQVEEIRGFIDKIAENVE-EVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSI 77 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455554555444444444443 23322222 122346888888888888888888888888765543
No 8
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=51.23 E-value=24 Score=25.36 Aligned_cols=28 Identities=14% Similarity=0.253 Sum_probs=13.9
Q ss_pred HHHHHHHhccchhHHHHHHHHHHHhhhh
Q 032024 80 TIREELEALADPMRKEVAVVRKKIDSVN 107 (148)
Q Consensus 80 ~IrEELE~laDPmRKEVa~VRKkID~vN 107 (148)
.++++|+.+.+-+.+=+..++++|..+.
T Consensus 46 ~~~~~i~~l~~~i~~~~~~~~~~lk~l~ 73 (196)
T 1fio_A 46 HLRHSLDNFVAQATDLQFKLKNEIKSAQ 73 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555555444433
No 9
>3hjl_A Flagellar motor switch protein FLIG; armadillo repeat motif, superhelix, conformational plasticit repeat, torque generation; 2.40A {Aquifex aeolicus}
Probab=47.57 E-value=20 Score=29.72 Aligned_cols=48 Identities=13% Similarity=0.372 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhcccc
Q 032024 59 EVREKVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDSVNKELK 111 (148)
Q Consensus 59 EVReKVqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreLK 111 (148)
+||++++.-+.. +.=..|++|||.||-.-.++|+..+++|=.+=|.|-
T Consensus 273 elrekil~nmS~-----Raa~~l~eele~~GpVr~~dVE~Aq~~Iv~~~r~L~ 320 (329)
T 3hjl_A 273 DIKQKFLSNMSK-----RAAKLFLEDMEALGPVKKSEIEKAQRQVVNIIRKMI 320 (329)
T ss_dssp HHHHHHHTTSCH-----HHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCH-----HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 578999887752 334568999999998888999999999987766654
No 10
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=46.15 E-value=46 Score=27.22 Aligned_cols=45 Identities=18% Similarity=0.286 Sum_probs=21.5
Q ss_pred cchhHHHHHHHHHHHhhhhcccccchhh-----hhhhccccccccCCCCC
Q 032024 89 ADPMRKEVAVVRKKIDSVNKELKPLGHT-----CQKKTYDNVCHRKENTR 133 (148)
Q Consensus 89 aDPmRKEVa~VRKkID~vNreLKPLgqt-----CqKKEkEY~~~~~~~~~ 133 (148)
.+-..+|+..++++|+...+.+.=|-+. .+.|+.+=..-+.|.||
T Consensus 539 ~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~~~~~~ 588 (597)
T 3oja_B 539 TEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKNRNPDTR 588 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------
T ss_pred hhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 3444566667777666666666555443 44444444444444444
No 11
>2d8d_A Aroag, phospho-2-dehydro-3-deoxyheptonate aldolase/chori mutase; chorismate, dimer, structural genomics, NPPSFA; 1.15A {Thermus thermophilus} SCOP: a.130.1.1 PDB: 2d8e_A
Probab=42.77 E-value=8.2 Score=25.54 Aligned_cols=19 Identities=37% Similarity=0.688 Sum_probs=14.8
Q ss_pred HHHHHHHHHhhhhcccccc
Q 032024 95 EVAVVRKKIDSVNKELKPL 113 (148)
Q Consensus 95 EVa~VRKkID~vNreLKPL 113 (148)
+++.+|+.||.++++|--|
T Consensus 4 ~L~~lR~~ID~iD~~l~~L 22 (90)
T 2d8d_A 4 RIQALRKEVDRVNREILRL 22 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4677888999988887554
No 12
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=40.69 E-value=1.1e+02 Score=24.67 Aligned_cols=54 Identities=15% Similarity=0.215 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhHH---------------HHhhHHHHHHHHHhccchhHHHHHHHHHHHhh
Q 032024 52 EIEKKKLEVREKVQAHLGRVEE---------------ETKRLATIREELEALADPMRKEVAVVRKKIDS 105 (148)
Q Consensus 52 EIERkKmEVReKVqaqLGRvEE---------------ETkRLA~IrEELE~laDPmRKEVa~VRKkID~ 105 (148)
.+.+..-+.+..++...+.+|. -.++...+..++|..=+-+++++...+..|+.
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (487)
T 3oja_A 378 NGRRAHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQ 446 (487)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCCCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhhHHHhhchhhhcccccccCcHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhHHHH
Confidence 3445555667777778788773 33444445555555555566666666655543
No 13
>1jzp_A Skeletal dihydropydrine receptor; alpha helical peptide, DHPR, D-isomer, signaling protein; NMR {Synthetic} SCOP: j.68.1.1
Probab=40.34 E-value=16 Score=21.19 Aligned_cols=15 Identities=33% Similarity=0.532 Sum_probs=12.0
Q ss_pred hhhhhHHHHHHHHHH
Q 032024 45 TFRAKEEEIEKKKLE 59 (148)
Q Consensus 45 ~FrAKEEEIERkKmE 59 (148)
.=++++||++++||-
T Consensus 3 aqKekeEe~kr~k~~ 17 (26)
T 1jzp_A 3 AQKAKAEERKRRKMS 17 (26)
T ss_pred HHHHHHHHHHHHHHH
Confidence 457889999999864
No 14
>3rmi_A Chorismate mutase protein; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid; 2.40A {Bartonella henselae}
Probab=40.17 E-value=12 Score=26.41 Aligned_cols=22 Identities=27% Similarity=0.433 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHhhhhcccccc
Q 032024 92 MRKEVAVVRKKIDSVNKELKPL 113 (148)
Q Consensus 92 mRKEVa~VRKkID~vNreLKPL 113 (148)
+-.+++.+|..||.++++|--|
T Consensus 10 ~~~~L~~lR~~ID~ID~~il~L 31 (114)
T 3rmi_A 10 ILSELAYLRQSIDNFDITLIHI 31 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHH
Confidence 4456888999999999888655
No 15
>2gtv_X CM, chorismate mutase; four-helix bundle, isomerase; HET: TSA; NMR {Methanocaldococcus jannaschii} SCOP: a.130.1.3
Probab=40.08 E-value=8.4 Score=27.28 Aligned_cols=17 Identities=35% Similarity=0.679 Sum_probs=15.1
Q ss_pred HHHHHHHHHhhhhcccc
Q 032024 95 EVAVVRKKIDSVNKELK 111 (148)
Q Consensus 95 EVa~VRKkID~vNreLK 111 (148)
.++.+|++||.++.+|-
T Consensus 4 ~L~~lR~~ID~ID~~il 20 (104)
T 2gtv_X 4 KLAEIRKKIDEIDNKIL 20 (104)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47889999999999986
No 16
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=37.92 E-value=89 Score=20.85 Aligned_cols=53 Identities=11% Similarity=0.336 Sum_probs=27.5
Q ss_pred HHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhcccccchhhhhhh
Q 032024 64 VQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDSVNKELKPLGHTCQKK 120 (148)
Q Consensus 64 VqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreLKPLgqtCqKK 120 (148)
|+..|..++.-..+|...-+.+ |+.|-. ...++..||.+..+++-++..|..+
T Consensus 17 I~~~i~~i~~~v~~l~~~~~~~--L~~~~~--~~~~~~~l~~l~~~i~~~a~~ik~~ 69 (127)
T 1ez3_A 17 IRGFIDKIAENVEEVKRKHSAI--LASPNP--DEKTKEELEELMSDIKKTANKVRSK 69 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHCSSC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhcCCc--cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555544 444432 2245555555555555555555444
No 17
>3ljc_A ATP-dependent protease LA; LON N-domain, allosteric enzyme, ATP-binding, DNA-binding, H nucleotide-binding, serine protease, stress respo; 2.60A {Escherichia coli}
Probab=35.41 E-value=1e+02 Score=23.23 Aligned_cols=42 Identities=17% Similarity=0.396 Sum_probs=30.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhhHHH---HhhHHHHHHHHH
Q 032024 45 TFRAKEEEIEKKKLEVREKVQAHLGRVEEE---TKRLATIREELE 86 (148)
Q Consensus 45 ~FrAKEEEIERkKmEVReKVqaqLGRvEEE---TkRLA~IrEELE 86 (148)
.+=.+|-||-+-+.+++.+|+.++..---| -..|..|++||-
T Consensus 205 ~lL~~e~e~~~l~~~I~~~v~~~~~k~Qrey~LrEQlk~IqkELG 249 (252)
T 3ljc_A 205 AMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELG 249 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344567777778888999999998877666 345777777774
No 18
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=35.03 E-value=70 Score=21.15 Aligned_cols=62 Identities=24% Similarity=0.275 Sum_probs=41.9
Q ss_pred HHHHHhhhhHHHHhhHHHHHHHHHhccch---------------hHHHHHHHHHHHhhhhcccccchhhhhhhcccc
Q 032024 63 KVQAHLGRVEEETKRLATIREELEALADP---------------MRKEVAVVRKKIDSVNKELKPLGHTCQKKTYDN 124 (148)
Q Consensus 63 KVqaqLGRvEEETkRLA~IrEELE~laDP---------------mRKEVa~VRKkID~vNreLKPLgqtCqKKEkEY 124 (148)
.+.+++..++.+-+.+.-.-+||+.+.|- .-.=+..|-++++.+..+++-|-......++++
T Consensus 24 ~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l 100 (117)
T 2zqm_A 24 LVVQQKQKVQLELTEAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKIETLEVRLNALERQEKKLNEKL 100 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888888888999988652 222345566777777777776666655555443
No 19
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=33.39 E-value=59 Score=20.80 Aligned_cols=30 Identities=30% Similarity=0.427 Sum_probs=22.6
Q ss_pred HHHHHHHHHhhhhHHHHhhHHHHHHHHHhc
Q 032024 59 EVREKVQAHLGRVEEETKRLATIREELEAL 88 (148)
Q Consensus 59 EVReKVqaqLGRvEEETkRLA~IrEELE~l 88 (148)
++++-+..|+..++++-..|..++..|+.+
T Consensus 39 ~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~ 68 (99)
T 1q08_A 39 ESKGIVQERLQEVEARIAELQSMQRSLQRL 68 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777788888888888888877777653
No 20
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=32.55 E-value=80 Score=21.94 Aligned_cols=50 Identities=28% Similarity=0.465 Sum_probs=28.0
Q ss_pred HHHHHHHHhhhhHHHHhhHHHHHHHH-------HhccchhHHHHHHHHHHHhhhhcc
Q 032024 60 VREKVQAHLGRVEEETKRLATIREEL-------EALADPMRKEVAVVRKKIDSVNKE 109 (148)
Q Consensus 60 VReKVqaqLGRvEEETkRLA~IrEEL-------E~laDPmRKEVa~VRKkID~vNre 109 (148)
+|.+++..++..--|-.-|..+.+|| +.|-.-+-.|.+.|.|-|+.+-+-
T Consensus 12 LRrrl~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K 68 (78)
T 3iv1_A 12 LRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKK 68 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555566666654 345555666666666666654433
No 21
>2vkl_A RV0948C/MT0975; helical, intracellular, chorismate mutase, isomerase; 1.65A {Mycobacterium tuberculosis} PDB: 2qbv_A 2w19_C 2w1a_C*
Probab=31.72 E-value=13 Score=25.29 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHHhhhhcccccc
Q 032024 91 PMRKEVAVVRKKIDSVNKELKPL 113 (148)
Q Consensus 91 PmRKEVa~VRKkID~vNreLKPL 113 (148)
|.-.+++.+|+.||.++++|--|
T Consensus 9 ~~~~~L~~lR~~ID~iD~~Ll~L 31 (90)
T 2vkl_A 9 QPVPEIDTLREEIDRLDAEILAL 31 (90)
T ss_dssp ----CHHHHHHHHHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHHHHH
Confidence 33346888999999999888655
No 22
>1ybz_A Chorismate mutase; conserved hypothetical protein, hyperthermophIle, structural genomics, PSI, protein structu initiative; 1.82A {Pyrococcus furiosus} SCOP: a.130.1.1
Probab=29.72 E-value=21 Score=24.50 Aligned_cols=20 Identities=25% Similarity=0.522 Sum_probs=16.3
Q ss_pred HHHHHHHHHhhhhcccccch
Q 032024 95 EVAVVRKKIDSVNKELKPLG 114 (148)
Q Consensus 95 EVa~VRKkID~vNreLKPLg 114 (148)
+++.+|..||.++++|--|=
T Consensus 18 ~L~~lR~~ID~ID~~Ll~LL 37 (91)
T 1ybz_A 18 TLKLLRKEIDKIDNQIISLL 37 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 58889999999999886553
No 23
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=29.38 E-value=1.8e+02 Score=21.88 Aligned_cols=73 Identities=21% Similarity=0.296 Sum_probs=45.7
Q ss_pred hhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHhhHH------------------HHHHHHHhccch--------
Q 032024 38 MSRSALTTFRAKEEEIEKKKLEVREKVQAHLGRVEEETKRLA------------------TIREELEALADP-------- 91 (148)
Q Consensus 38 ~srsAlS~FrAKEEEIERkKmEVReKVqaqLGRvEEETkRLA------------------~IrEELE~laDP-------- 91 (148)
-+|..|+.-+++..+.|+-+-+.. .....|.-++.|..+|. .|-.|||.|+--
T Consensus 12 ~~r~~l~~~~~~~~~le~l~~~l~-~l~~~l~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~LTasLFeEAN~M 90 (135)
T 2e7s_A 12 KSLKTIASQKAAIENYNQLKEDYN-TLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNL 90 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTTHHHHHHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777888888888766543 33345555666655554 477788877532
Q ss_pred ---hHHHHHHHHHHHhhhhcccc
Q 032024 92 ---MRKEVAVVRKKIDSVNKELK 111 (148)
Q Consensus 92 ---mRKEVa~VRKkID~vNreLK 111 (148)
-|++-+.+-+|.+.+-++|+
T Consensus 91 Va~ar~~~~~~e~r~~~L~~ql~ 113 (135)
T 2e7s_A 91 VADARMEKYAIEILNKRLTEQLR 113 (135)
T ss_dssp HHHTTHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 26666666666666655543
No 24
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=29.27 E-value=74 Score=25.13 Aligned_cols=64 Identities=11% Similarity=0.197 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhcccccchhhhhh-------hcccccc
Q 032024 59 EVREKVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDSVNKELKPLGHTCQK-------KTYDNVC 126 (148)
Q Consensus 59 EVReKVqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreLKPLgqtCqK-------KEkEY~~ 126 (148)
+....+...+...|+-.-++.++.+|+.. +..+++.++..++..+-++-|..+.|.. =.-+|+|
T Consensus 138 ~~~~~~~e~~~~~e~~~~~i~ql~~En~~----le~~Ie~Lk~e~~e~~te~~p~~k~~~qly~~vt~i~w~~~~ 208 (250)
T 2ve7_C 138 ACRETYMEFLWQYKSSADKMQQLNAAHQE----ALMKLERLEKEVDEDTTVTIPSAVYVAQLYHQVSKIEWEYEC 208 (250)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHH----HHHSCC-------------CTTTHHHHHHHHHHHCCEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhceeeccc
Confidence 33444566667788888888888888766 4667777778888888888888877753 3446666
No 25
>1q06_A Transcriptional regulator CUER; MERR family transcriptional regulator, copper efflux regulator; 2.07A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q05_A 1q07_A
Probab=27.78 E-value=66 Score=22.49 Aligned_cols=32 Identities=25% Similarity=0.534 Sum_probs=25.4
Q ss_pred HHHHHHHHHhhhhHHHHhhHHHHHHHHHhccc
Q 032024 59 EVREKVQAHLGRVEEETKRLATIREELEALAD 90 (148)
Q Consensus 59 EVReKVqaqLGRvEEETkRLA~IrEELE~laD 90 (148)
++.+-+..++..++++...|..++..|+.+.+
T Consensus 79 ~~~~~l~~~~~~l~~~i~~L~~~~~~L~~~~~ 110 (135)
T 1q06_A 79 DVKRRTLEKVAEIERHIEELQSMRDQLLALAN 110 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677888888888888888888888877543
No 26
>3axj_A GM27569P, translin; translin/TRAX heterodimer, passenger RNA cleavage, RNAse, DN protein; 2.10A {Drosophila melanogaster} PDB: 2qva_A 2qrx_A 3riu_A
Probab=27.68 E-value=1.5e+02 Score=23.36 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=24.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHhhHHHHHH
Q 032024 44 TTFRAKEEEIEKKKLEVREKVQAHLGRVEEETKRLATIRE 83 (148)
Q Consensus 44 S~FrAKEEEIERkKmEVReKVqaqLGRvEEETkRLA~IrE 83 (148)
+.|..=.++++. +-.+||++..---.++..+|+.-++-.
T Consensus 22 ~iF~~~~~~Ld~-~~d~REriik~sRdIt~~sk~~I~~Lh 60 (249)
T 3axj_A 22 DIFSNYQKYIDN-EQEVRENIRIVVREIEHLSKEAQIKLQ 60 (249)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555555553 356677777766677777777765543
No 27
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=27.20 E-value=31 Score=24.89 Aligned_cols=14 Identities=7% Similarity=0.064 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHhhh
Q 032024 93 RKEVAVVRKKIDSV 106 (148)
Q Consensus 93 RKEVa~VRKkID~v 106 (148)
++|...+|++|+.+
T Consensus 25 e~E~~rLr~~~~~L 38 (100)
T 1go4_E 25 EGERSRLEEEKRML 38 (100)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444443
No 28
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=27.16 E-value=1.8e+02 Score=21.20 Aligned_cols=59 Identities=25% Similarity=0.508 Sum_probs=34.0
Q ss_pred HHHHHHHHHhhhhHHH-HhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhcccccchhhhhhh
Q 032024 59 EVREKVQAHLGRVEEE-TKRLATIREELEALADPMRKEVAVVRKKIDSVNKELKPLGHTCQKK 120 (148)
Q Consensus 59 EVReKVqaqLGRvEEE-TkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreLKPLgqtCqKK 120 (148)
++|.+|.-.++.+-.- .+.+..+|+.|+-+++-+|. .|++.++.+...|.|++..-+.+
T Consensus 93 e~r~~l~P~~~e~~~~~~~~~e~lr~~l~Py~~el~~---~~~~~~e~Lr~~L~p~~e~lr~~ 152 (185)
T 3r2p_A 93 EVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAELQE---GARQKLHELQEKLSPLGEEMRDR 152 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHTTTTTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHH
Confidence 4555555555443321 23455666666655555554 45677777777777777665433
No 29
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=26.97 E-value=54 Score=21.82 Aligned_cols=26 Identities=35% Similarity=0.317 Sum_probs=12.9
Q ss_pred HHHHhhhhHHHHhhHHHHHHHHHhcc
Q 032024 64 VQAHLGRVEEETKRLATIREELEALA 89 (148)
Q Consensus 64 VqaqLGRvEEETkRLA~IrEELE~la 89 (148)
+.++|..++.+--.+-.=|+|||.|.
T Consensus 61 l~~~l~~~e~eLe~~~erWeeLe~~~ 86 (89)
T 2lw1_A 61 VLADMAAAEQELEQAFERWEYLEALK 86 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 33444444444444445555665543
No 30
>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate binding, lectin, mannose, sugar BIND protein; 1.80A {Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A 3pak_A
Probab=26.68 E-value=30 Score=23.00 Aligned_cols=34 Identities=12% Similarity=0.198 Sum_probs=18.4
Q ss_pred HHHhccchhHHHHHHHHHHHhhhhcccccchhhhh
Q 032024 84 ELEALADPMRKEVAVVRKKIDSVNKELKPLGHTCQ 118 (148)
Q Consensus 84 ELE~laDPmRKEVa~VRKkID~vNreLKPLgqtCq 118 (148)
+|+..-.-|..+++.++..+ .+..-+.+.|..|-
T Consensus 6 ~l~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~Cy 39 (148)
T 3pbf_A 6 ELQTELYEIKHQILQTMGVL-SLQGSMLSVGDKVF 39 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHTTSCEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhcceeeCCEEE
Confidence 33333334445555555555 55555567777773
No 31
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=26.46 E-value=28 Score=22.73 Aligned_cols=14 Identities=50% Similarity=0.710 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHHh
Q 032024 91 PMRKEVAVVRKKID 104 (148)
Q Consensus 91 PmRKEVa~VRKkID 104 (148)
-+-||++-+||||+
T Consensus 35 ylekeianlrkkie 48 (49)
T 3he5_A 35 YLEKEIANLRKKIE 48 (49)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 35689999999996
No 32
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=26.23 E-value=2.6e+02 Score=22.71 Aligned_cols=31 Identities=26% Similarity=0.278 Sum_probs=15.7
Q ss_pred HHHHhccchhHHHHHHHHHHHhhhhcccccc
Q 032024 83 EELEALADPMRKEVAVVRKKIDSVNKELKPL 113 (148)
Q Consensus 83 EELE~laDPmRKEVa~VRKkID~vNreLKPL 113 (148)
++||...+-+++-+..++..++..+.+||-|
T Consensus 547 ~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l 577 (597)
T 3oja_B 547 IALEKQLDNKRAKQAELRQETSLKRQKVKQL 577 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555555555555555544
No 33
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=25.35 E-value=72 Score=20.09 Aligned_cols=28 Identities=18% Similarity=0.447 Sum_probs=14.3
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHHHhhhhcc
Q 032024 78 LATIREELEALADPMRKEVAVVRKKIDSVNKE 109 (148)
Q Consensus 78 LA~IrEELE~laDPmRKEVa~VRKkID~vNre 109 (148)
|++|-++++.| .+|+..++.+|+.++..
T Consensus 29 Ld~v~~~~~~l----~~e~~~L~~~~~~l~~~ 56 (57)
T 2wuj_A 29 LAQVRKDYEIV----LRKKTELEAKVNELDER 56 (57)
T ss_dssp HHHHHHHHHHH----HHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHhc
Confidence 44455555554 45667777777666554
No 34
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.94 E-value=78 Score=20.36 Aligned_cols=47 Identities=21% Similarity=0.331 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhHHHHhhHHHHHHHHHhccchhHHH
Q 032024 49 KEEEIEKKKLEVREKVQAHLGRVEEETKRLATIREELEALADPMRKE 95 (148)
Q Consensus 49 KEEEIERkKmEVReKVqaqLGRvEEETkRLA~IrEELE~laDPmRKE 95 (148)
-.+||.+.=...--+.+--.+.-.+...++..|.+--+.|.||.++.
T Consensus 20 s~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 66 (88)
T 2ctr_A 20 SERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRK 66 (88)
T ss_dssp CHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHH
T ss_pred CHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHH
Confidence 34555554333333333223333556778889999999999997643
No 35
>2ccy_A Cytochrome C; electron transport (heme protein); HET: HEM; 1.67A {Phaeospirillum molischianum} SCOP: a.24.3.2
Probab=24.26 E-value=29 Score=24.27 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=33.9
Q ss_pred HhhHHHHH----HHHHhccchhHHHHHHHHHHH----hhhhcccccchhhhh
Q 032024 75 TKRLATIR----EELEALADPMRKEVAVVRKKI----DSVNKELKPLGHTCQ 118 (148)
Q Consensus 75 TkRLA~Ir----EELE~laDPmRKEVa~VRKkI----D~vNreLKPLgqtCq 118 (148)
|+=+..|| ++...+++-+...++.+-.-. +.+-..+.++|++|-
T Consensus 68 s~A~p~IW~~~~~~F~~~~~~~~~aa~~l~~aA~~gd~~~~~a~~~v~~~Ck 119 (128)
T 2ccy_A 68 GETKPEAFGSKSAEFLEGWKALATESTKLAAAAKAGPDALKAQAAATGKVCK 119 (128)
T ss_dssp CCBCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHhHHH
Confidence 56778888 677888888888887766543 556677889999997
No 36
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=24.23 E-value=86 Score=22.98 Aligned_cols=51 Identities=16% Similarity=0.205 Sum_probs=29.2
Q ss_pred HHHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhcccccc
Q 032024 63 KVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDSVNKELKPL 113 (148)
Q Consensus 63 KVqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreLKPL 113 (148)
.+.++|...+.|.-.|-+=...+..=.+-..+|+..++++|+...++++-|
T Consensus 79 ~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~l 129 (138)
T 3hnw_A 79 SLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445555555443333333334556778888888888777776655
No 37
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=24.15 E-value=1.9e+02 Score=20.71 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=22.6
Q ss_pred hHHHHHHHHHhccchhHHHHHHHHHHHhhhhccc
Q 032024 77 RLATIREELEALADPMRKEVAVVRKKIDSVNKEL 110 (148)
Q Consensus 77 RLA~IrEELE~laDPmRKEVa~VRKkID~vNreL 110 (148)
....++++|+.+.+-..+=...|+++|..+.+..
T Consensus 75 ~~~~~k~~le~l~~~i~~~a~~ik~~Lk~l~~~~ 108 (180)
T 1s94_A 75 TDDQMKEELEELMTDIKRTANKVRGKLKTIELNI 108 (180)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446778888888877777777888777766543
No 38
>3de8_A Soluble cytochrome B562; Cu-stabilized dimeric superstructure, electron transport, heme, iron, metal-binding, periplasm, transport; HET: HEM; 1.72A {Escherichia coli} SCOP: a.24.3.1 PDB: 2qla_A* 3de9_A* 3c62_A* 3c63_A* 2bc5_A* 3l1m_A* 1qq3_A* 1apc_A 1qpu_A* 256b_A* 3foo_A* 3fop_A* 3nmi_A* 3nmj_A* 3nmk_A* 1lm3_B* 1m6t_A 1yyj_A 1yyx_A 3hnk_A* ...
Probab=24.03 E-value=25 Score=23.69 Aligned_cols=48 Identities=15% Similarity=0.302 Sum_probs=30.9
Q ss_pred HhhHHHHHHHHHhccchhHHHHHHHHH-----HHhhhhcccccchhhhhhhccccccccC
Q 032024 75 TKRLATIREELEALADPMRKEVAVVRK-----KIDSVNKELKPLGHTCQKKTYDNVCHRK 129 (148)
Q Consensus 75 TkRLA~IrEELE~laDPmRKEVa~VRK-----kID~vNreLKPLgqtCqKKEkEY~~~~~ 129 (148)
|+=+..||+.-++|.. +-.++..+-. .++.+=..+.++|.+|. .||.+
T Consensus 52 t~a~p~iw~~~~~F~~-l~~~~~~l~~aa~~gd~~~~k~a~~~v~~~Ck------~CH~~ 104 (106)
T 3de8_A 52 SPDSPEMHDFRHGFDI-LVGQIHDALHLANEGKVKEAQAAAEQLKTTCN------ACHQK 104 (106)
T ss_dssp CTTSHHHHHHHHHHHH-HHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHH------HHHHH
T ss_pred ccccHHHHHhHHHHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH------HHHHh
Confidence 5566777777777765 4444444433 24556667889999996 47753
No 39
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=24.01 E-value=1.5e+02 Score=19.21 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=39.4
Q ss_pred HHHHHhhhhHHHHhhHHHHHHHHHhccch---------------hHHHHHHHHHHHhhhhcccccchhhhhhhccc
Q 032024 63 KVQAHLGRVEEETKRLATIREELEALADP---------------MRKEVAVVRKKIDSVNKELKPLGHTCQKKTYD 123 (148)
Q Consensus 63 KVqaqLGRvEEETkRLA~IrEELE~laDP---------------mRKEVa~VRKkID~vNreLKPLgqtCqKKEkE 123 (148)
.+.+++..++.+-..+...-+||+.+.|- .-.=+..|-++++.+..+++-|-......+++
T Consensus 19 ~l~~q~~~l~~~~~e~~~~~~EL~~l~~d~~vy~~iG~vfv~~~~~e~~~~L~~~~e~i~~~i~~le~~~~~~~~~ 94 (107)
T 1fxk_A 19 AISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREKTIERQEERVMKK 94 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHhHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567777788888888888899888652 12223456667777776666666555544443
No 40
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=23.79 E-value=1.8e+02 Score=19.99 Aligned_cols=68 Identities=19% Similarity=0.274 Sum_probs=40.0
Q ss_pred HhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhccccc
Q 032024 37 EMSRSALTTFRAKEEEIEKKKLEVREKVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDSVNKELKP 112 (148)
Q Consensus 37 e~srsAlS~FrAKEEEIERkKmEVReKVqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreLKP 112 (148)
..+++||+..++++++|.+--..+.| +-+=-.-||.+=++=..+-|..-.-|....-.++..|++|+-
T Consensus 7 ~~a~~~l~~i~eR~~eI~~Ie~~I~e--------L~~iF~dla~lV~eQge~Id~Ie~nv~~a~~~v~~g~~eL~k 74 (109)
T 3hd7_B 7 SISKQALSEIETRHSEIIKLENSIRE--------LHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKK 74 (109)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999998765544443 222233444444444455555555566666666666666653
No 41
>2l1q_A Liver-expressed antimicrobial peptide 2; polypeptide, disulfides, antimicrobial protein, LEAP-2; NMR {Homo sapiens}
Probab=23.50 E-value=18 Score=22.98 Aligned_cols=15 Identities=40% Similarity=1.130 Sum_probs=12.0
Q ss_pred cccchhhhhhhccccccc
Q 032024 110 LKPLGHTCQKKTYDNVCH 127 (148)
Q Consensus 110 LKPLgqtCqKKEkEY~~~ 127 (148)
+||+|-+|+. -|+|-
T Consensus 10 ~kP~GA~Crd---~~EC~ 24 (40)
T 2l1q_A 10 LRPIGASCRD---DSECI 24 (40)
T ss_dssp SBCTTSBCSS---GGGBT
T ss_pred CCccchhhcc---chhhh
Confidence 7999999986 46663
No 42
>3ret_A Salicylate biosynthesis protein PCHB; intertwined dimer, lyase, mutase; HET: SAL; 1.79A {Pseudomonas aeruginosa} SCOP: a.130.1.1 PDB: 2h9d_A 3rem_A* 3hgx_A* 3hgw_C 2h9c_A
Probab=23.32 E-value=29 Score=23.45 Aligned_cols=19 Identities=21% Similarity=0.408 Sum_probs=14.3
Q ss_pred HHHHHHHHHhhhhcccccc
Q 032024 95 EVAVVRKKIDSVNKELKPL 113 (148)
Q Consensus 95 EVa~VRKkID~vNreLKPL 113 (148)
.++.+|..||.++++|=-|
T Consensus 9 ~L~~lR~~ID~iD~~il~L 27 (101)
T 3ret_A 9 GLADIREAIDRIDLDIVQA 27 (101)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 3677888888888887554
No 43
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=23.29 E-value=3.7e+02 Score=25.36 Aligned_cols=34 Identities=12% Similarity=0.367 Sum_probs=25.2
Q ss_pred HHHHHHHhccchhHHHHHHHHHHHhhhhcccccc
Q 032024 80 TIREELEALADPMRKEVAVVRKKIDSVNKELKPL 113 (148)
Q Consensus 80 ~IrEELE~laDPmRKEVa~VRKkID~vNreLKPL 113 (148)
+..++|+....-+.+|.+.+|.-+|.+|..+.=.
T Consensus 1016 ~~~~~L~~kv~~L~~e~~~L~qq~~~l~~~~~~~ 1049 (1080)
T 2dfs_A 1016 KYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQ 1049 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445777777778899999999999988655433
No 44
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=22.76 E-value=2.1e+02 Score=20.23 Aligned_cols=39 Identities=8% Similarity=0.069 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHH
Q 032024 59 EVREKVQAHLGRVEEETKRLATIREELEALADPMRKEVA 97 (148)
Q Consensus 59 EVReKVqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa 97 (148)
++.+-+..++..++++-..|..+++.|+..-+-...-+.
T Consensus 81 ~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~ 119 (142)
T 3gp4_A 81 ARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLI 119 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677778888888888888888777766555444333
No 45
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=22.71 E-value=28 Score=30.39 Aligned_cols=59 Identities=14% Similarity=0.308 Sum_probs=0.0
Q ss_pred HHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHH-------HHHHHhhhhcccccchhhhhhhccc
Q 032024 65 QAHLGRVEEETKRLATIREELEALADPMRKEVAV-------VRKKIDSVNKELKPLGHTCQKKTYD 123 (148)
Q Consensus 65 qaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~-------VRKkID~vNreLKPLgqtCqKKEkE 123 (148)
..++.++|+|+.+|+.-+.|+|.+-.-++.+..+ +-.+|+.+..++.-|..--++|+.|
T Consensus 369 ~e~~~~~~~e~~~l~~~~~~~e~~~~~l~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~e 434 (575)
T 2i1j_A 369 EEQLRQLQAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDEIRAKQEEVSRIQQEVELKDSE 434 (575)
T ss_dssp ------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777777777777776665555443322 3344444444444444444444444
No 46
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=22.36 E-value=2.2e+02 Score=20.41 Aligned_cols=36 Identities=19% Similarity=0.287 Sum_probs=22.3
Q ss_pred HhhHHHHHHHHHhccch-----------hHHHHHHHHHHHhhhhccc
Q 032024 75 TKRLATIREELEALADP-----------MRKEVAVVRKKIDSVNKEL 110 (148)
Q Consensus 75 TkRLA~IrEELE~laDP-----------mRKEVa~VRKkID~vNreL 110 (148)
-+.+..|-.|||.|+-- -|++-+.+-+|.+.+-.+|
T Consensus 46 E~~~~~ie~ElEeLTasLFeEAN~MVa~ar~e~~~~e~kn~~L~~qL 92 (97)
T 2eqb_B 46 EEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILNKRLTEQL 92 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888877532 2666666666666655544
No 47
>1t06_A Hypothetical protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, unknown function; 1.90A {Bacillus cereus} SCOP: a.118.1.17
Probab=22.35 E-value=49 Score=25.11 Aligned_cols=19 Identities=37% Similarity=0.543 Sum_probs=16.3
Q ss_pred HHHHHHHHHhccchhHHHH
Q 032024 78 LATIREELEALADPMRKEV 96 (148)
Q Consensus 78 LA~IrEELE~laDPmRKEV 96 (148)
+.+|+++|+.++||-.++.
T Consensus 3 ~~~i~~~L~~l~d~~~a~~ 21 (235)
T 1t06_A 3 FKTVMQELEALGKERTKKI 21 (235)
T ss_dssp HHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHH
Confidence 4679999999999988764
No 48
>3jxy_A Alkylpurine DNA glycosylase ALKD; heat repeat, DNA binding, DNA glycosylase, DNA alkylation, L complex, hydrolase-DNA complex; HET: DNA; 1.50A {Bacillus cereus} SCOP: a.118.1.0 PDB: 3jx7_A* 3bvs_A 3jy1_A* 3jxz_A*
Probab=22.25 E-value=48 Score=24.88 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=15.4
Q ss_pred HHHHHHHHhccchhHHH
Q 032024 79 ATIREELEALADPMRKE 95 (148)
Q Consensus 79 A~IrEELE~laDPmRKE 95 (148)
..|+++|+.++||-+++
T Consensus 7 ~~i~~~L~~~ad~~~a~ 23 (232)
T 3jxy_A 7 KALQEHFTAHQNPEKAE 23 (232)
T ss_dssp HHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHcCCHHHHH
Confidence 67999999999998887
No 49
>1wvt_A Hypothetical protein ST2180; structural genomics, unknown function; 2.30A {Sulfolobus tokodaii}
Probab=21.71 E-value=1.5e+02 Score=22.46 Aligned_cols=22 Identities=32% Similarity=0.504 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhhhhcccccchh
Q 032024 94 KEVAVVRKKIDSVNKELKPLGH 115 (148)
Q Consensus 94 KEVa~VRKkID~vNreLKPLgq 115 (148)
..|..+-+.||..|.+|-||..
T Consensus 78 ~~v~~LE~~id~~~~~l~pl~~ 99 (172)
T 1wvt_A 78 EKVKGIEELITNYSKELEPLRN 99 (172)
T ss_dssp HHHHHHHHHHHHHHTTSCCCCS
T ss_pred HHHHHHHHHHHHHHhhCCCCcc
Confidence 7899999999999999999853
No 50
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=21.13 E-value=1.2e+02 Score=19.18 Aligned_cols=65 Identities=18% Similarity=0.314 Sum_probs=35.1
Q ss_pred HHHhhhhhhHHHHHHHHH-HHHHHHHHHhhhhHHHHhhHHHHHHHHHhccchhHHHHHHHHHHHhhhhccccc
Q 032024 41 SALTTFRAKEEEIEKKKL-EVREKVQAHLGRVEEETKRLATIREELEALADPMRKEVAVVRKKIDSVNKELKP 112 (148)
Q Consensus 41 sAlS~FrAKEEEIERkKm-EVReKVqaqLGRvEEETkRLA~IrEELE~laDPmRKEVa~VRKkID~vNreLKP 112 (148)
++|.-.||.=|+|-.+-. |+-.-.+.+ +|+-+.-.+.--++|. ..+-|+..+|..|..+.-||-.
T Consensus 9 ~il~eiRaQYE~ia~knr~EaE~~y~~k---~eel~~~~~~~~~~l~----~~k~Ei~elrr~iq~L~~el~s 74 (77)
T 3trt_A 9 AAMRDVRQQYESVAAKNLQEAEEWYKSK---FADLSEAANRNNDALR----QAKQESTEYRRQVQSLTMEVDA 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHH---HHHHHHHHHhhHHHHH----HHHHHHHHHHHHHHHHHHHHHh
Confidence 466777777666655432 322222222 3333333333333332 2677888888888888777643
Done!