AmiGO: BLAST Results


BLAST match view associations BLAST with ETL1 ETL1 ETL1 AT2G02090	protein from Arabidopsis thaliana	7.2e-68
BLAST match view associations BLAST with PIE1 PIE1 PIE1 AT3G12810	protein from Arabidopsis thaliana	9.2e-32
BLAST match view associations BLAST with DDB_G0267638 DDB_G0267638 DDB_G0267638 CHR group protein	gene from Dictyostelium discoideum	4.1e-31
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Canis lupus familiaris	4.1e-31
BLAST match view associations BLAST with DDB_G0267556 DDB_G0267556 DDB_G0267556 CHR group protein	gene from Dictyostelium discoideum	5.9e-31
BLAST match view associations BLAST with Srcap Srcap Srcap Snf2-related CREBBP activator protein	gene from Rattus norvegicus	1.1e-30
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Helicase SRCAP	protein from Homo sapiens	1.1e-30
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Sus scrofa	1.1e-30
BLAST match view associations BLAST with LOC788113 LOC788113 LOC788113 Uncharacterized protein	protein from Bos taurus	1.2e-30
BLAST match view associations BLAST with M03C11.8 M03C11.8 M03C11.8	gene from Caenorhabditis elegans	1.2e-30
BLAST match view associations BLAST with Etl1 Etl1 Etl1 Etl1 homologue	protein from Drosophila melanogaster	6.2e-30
BLAST match view associations BLAST with dom dom dom domino	protein from Drosophila melanogaster	8.0e-30
BLAST match view associations BLAST with Hells Hells Hells helicase, lymphoid specific	gene from Rattus norvegicus	2.5e-29
BLAST match view associations BLAST with ssl-1 ssl-1 ssl-1	gene from Caenorhabditis elegans	6.5e-29
BLAST match view associations BLAST with HELLS HELLS HELLS Lymphoid-specific helicase	protein from Homo sapiens	7.1e-29
BLAST match view associations BLAST with SWR1 SWR1 SWR1 Swi2/Snf2-related ATPase structural component of the SWR1 complex	gene from Saccharomyces cerevisiae	9.5e-29
BLAST match view associations BLAST with orf19.1871 orf19.1871 orf19.1871	gene_product from Candida albicans	1.1e-28
BLAST match view associations BLAST with ino80 ino80 ino80 CHR group protein	gene from Dictyostelium discoideum	1.2e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Gallus gallus	2.5e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Canis lupus familiaris	2.9e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Canis lupus familiaris	2.9e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Canis lupus familiaris	2.9e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Sus scrofa	2.9e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Bos taurus	3.0e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	protein from Homo sapiens	3.7e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Sus scrofa	4.1e-28
BLAST match view associations BLAST with Smarcad1 Smarcad1 Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	protein from Mus musculus	7.6e-28
BLAST match view associations BLAST with Smarcad1 Smarcad1 Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`	gene from Rattus norvegicus	7.7e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	protein from Bos taurus	7.7e-28
BLAST match view associations BLAST with Hells Hells Hells helicase, lymphoid specific	protein from Mus musculus	8.2e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Lymphoid-specific helicase	protein from Homo sapiens	8.6e-28
BLAST match view associations BLAST with smarcad1 smarcad1 smarcad1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	protein from Xenopus (Silurana) tropicalis	9.5e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Canis lupus familiaris	1.1e-27
BLAST match view associations BLAST with INO80 INO80 INO80 DNA helicase INO80	protein from Homo sapiens	1.1e-27
BLAST match view associations BLAST with INO80 INO80 INO80 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-27
BLAST match view associations BLAST with INO80 INO80 INO80 Uncharacterized protein	protein from Gallus gallus	1.2e-27
BLAST match view associations BLAST with INO80 INO80 INO80 Uncharacterized protein	protein from Sus scrofa	1.2e-27
BLAST match view associations BLAST with ino80 ino80 ino80 INO80 homolog (S. cerevisiae)	gene_product from Danio rerio	1.2e-27
BLAST match view associations BLAST with Smarca1 Smarca1 Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	protein from Mus musculus	1.7e-27
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromatin remodeler that regulates various aspects of transcription	gene from Saccharomyces cerevisiae	1.7e-27
BLAST match view associations BLAST with si:dkey-76p7.6 si:dkey-76p7.6 si:dkey-76p7.6	gene_product from Danio rerio	1.8e-27
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Gallus gallus	1.8e-27
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	3.2e-27
BLAST match view associations BLAST with Ino80 Ino80 Ino80 INO80 homolog (S. cerevisiae)	gene from Rattus norvegicus	5.0e-27
BLAST match view associations BLAST with Ino80 Ino80 Ino80 INO80 homolog (S. cerevisiae)	protein from Mus musculus	5.0e-27
BLAST match view associations BLAST with INO80 INO80 INO80 Uncharacterized protein	protein from Bos taurus	5.0e-27
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	5.8e-27
BLAST match view associations BLAST with PF08_0048 PF08_0048 PF08_0048 ATP-dependent helicase, putative	gene from Plasmodium falciparum	9.4e-27
BLAST match view associations BLAST with PF08_0048 PF08_0048 PF08_0048 Probable ATP-dependent helicase PF08_0048	protein from Plasmodium falciparum 3D7	9.4e-27
BLAST match view associations BLAST with FUN30 FUN30 FUN30 Snf2p family member with ATP-dependent chromatin remodeling activity	gene from Saccharomyces cerevisiae	1.1e-26
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Gallus gallus	1.1e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with hells hells hells helicase, lymphoid-specific	gene_product from Danio rerio	1.3e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-26
BLAST match view associations BLAST with si:dkey-148b12.1 si:dkey-148b12.1 si:dkey-148b12.1	gene_product from Danio rerio	2.5e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Sus scrofa	2.5e-26
BLAST match view associations BLAST with isw isw isw CHR group protein	gene from Dictyostelium discoideum	2.5e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Gallus gallus	2.5e-26
BLAST match view associations BLAST with chd-1 chd-1 chd-1	gene from Caenorhabditis elegans	2.5e-26
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Gallus gallus	2.6e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Bos taurus	2.7e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Chromodomain-helicase-DNA-binding protein 2	protein from Homo sapiens	2.7e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Sus scrofa	2.7e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-26
BLAST match view associations BLAST with smarcad1 smarcad1 smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	gene_product from Danio rerio	2.8e-26
BLAST match view associations BLAST with Iswi Iswi Iswi Imitation SWI	protein from Drosophila melanogaster	5.1e-26
BLAST match view associations BLAST with CHR23 CHR23 CHR23 AT5G19310	protein from Arabidopsis thaliana	6.9e-26
BLAST match view associations BLAST with chd2 chd2 chd2 chromodomain helicase DNA binding protein 2	gene_product from Danio rerio	9.1e-26
BLAST match view associations BLAST with chd-3 chd-3 chd-3	gene from Caenorhabditis elegans	1.1e-25
BLAST match view associations BLAST with chd-3 chd-3 chd-3 Chromodomain-helicase-DNA-binding protein 3 homolog	protein from Caenorhabditis elegans	1.1e-25
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-25
BLAST match view associations BLAST with btaf1 btaf1 btaf1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated	gene_product from Danio rerio	1.2e-25
BLAST match view associations BLAST with DDB_G0293012 DDB_G0293012 DDB_G0293012 CHR group protein	gene from Dictyostelium discoideum	1.4e-25
BLAST match view associations BLAST with CHD1L CHD1L CHD1L Uncharacterized protein	protein from Gallus gallus	1.4e-25
BLAST match view associations BLAST with DDB_G0280705 DDB_G0280705 DDB_G0280705 CHR group protein	gene from Dictyostelium discoideum	1.6e-25
BLAST match view associations BLAST with ERCC6 ERCC6 ERCC6 DNA excision repair protein ERCC-6	protein from Homo sapiens	1.6e-25
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Gallus gallus	1.8e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Gallus gallus	2.3e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Gallus gallus	2.4e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Gallus gallus	2.4e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Homo sapiens	2.9e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Uncharacterized protein	protein from Canis lupus familiaris	2.9e-25
BLAST match view associations BLAST with Chd1 Chd1 Chd1 chromodomain helicase DNA binding protein 1	protein from Mus musculus	2.9e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Uncharacterized protein	protein from Canis lupus familiaris	3.0e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Uncharacterized protein	protein from Bos taurus	3.1e-25
BLAST match view associations BLAST with LOC100359912 LOC100359912 LOC100359912 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like	gene from Rattus norvegicus	3.4e-25
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032027
        (148 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2051678 - symbol:ETL1 species:3702 "Arabidopsi...   689  7.2e-68   1
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT...   364  9.2e-32   1
ASPGD|ASPL0000041040 - symbol:AN9077 species:162425 "Emer...   360  1.9e-31   1
DICTYBASE|DDB_G0267638 - symbol:DDB_G0267638 "CHR group p...   360  4.1e-31   1
UNIPROTKB|J9P9W7 - symbol:SRCAP "Uncharacterized protein"...   356  4.1e-31   1
DICTYBASE|DDB_G0267556 - symbol:DDB_G0267556 "CHR group p...   353  5.9e-31   1
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator...   356  1.1e-30   1
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:...   356  1.1e-30   1
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"...   356  1.1e-30   1
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot...   356  1.2e-30   1
WB|WBGene00010845 - symbol:M03C11.8 species:6239 "Caenorh...   349  1.2e-30   1
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ...   345  5.0e-30   1
FB|FBgn0032157 - symbol:Etl1 "Etl1 homologue" species:722...   341  6.2e-30   1
FB|FBgn0020306 - symbol:dom "domino" species:7227 "Drosop...   348  8.0e-30   1
RGD|1309820 - symbol:Hells "helicase, lymphoid specific" ...   327  2.5e-29   1
WB|WBGene00007027 - symbol:ssl-1 species:6239 "Caenorhabd...   338  6.5e-29   1
UNIPROTKB|Q9NW36 - symbol:HELLS "cDNA FLJ10339 fis, clone...   321  7.1e-29   1
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st...   334  9.5e-29   1
CGD|CAL0001763 - symbol:orf19.1871 species:5476 "Candida ...   334  1.1e-28   1
DICTYBASE|DDB_G0292358 - symbol:ino80 "CHR group protein"...   335  1.2e-28   1
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"...   326  2.5e-28   1
UNIPROTKB|E2RG62 - symbol:SMARCAD1 "Uncharacterized prote...   327  2.9e-28   1
UNIPROTKB|J9NX47 - symbol:SMARCAD1 "Uncharacterized prote...   327  2.9e-28   1
UNIPROTKB|J9PA79 - symbol:SMARCAD1 "Uncharacterized prote...   327  2.9e-28   1
UNIPROTKB|F1RWW3 - symbol:SMARCAD1 "Uncharacterized prote...   327  2.9e-28   1
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"...   325  3.0e-28   1
POMBASE|SPAC20G8.08c - symbol:fft1 "fun thirty related pr...   326  3.2e-28   1
UNIPROTKB|Q9H4L7 - symbol:SMARCAD1 "SWI/SNF-related matri...   326  3.7e-28   1
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"...   324  4.1e-28   1
MGI|MGI:95453 - symbol:Smarcad1 "SWI/SNF-related, matrix-...   323  7.6e-28   1
RGD|1309640 - symbol:Smarcad1 "SWI/SNF-related, matrix-as...   323  7.7e-28   1
UNIPROTKB|E1B7X9 - symbol:SMARCAD1 "SWI/SNF-related matri...   323  7.7e-28   1
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi...   321  8.2e-28   1
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica...   321  8.6e-28   1
UNIPROTKB|Q5FWR0 - symbol:smarcad1 "SWI/SNF-related matri...   322  9.5e-28   1
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"...   320  1.1e-27   1
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec...   324  1.1e-27   1
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"...   324  1.1e-27   1
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"...   324  1.2e-27   1
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"...   324  1.2e-27   1
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S....   324  1.2e-27   1
MGI|MGI:1935127 - symbol:Smarca1 "SWI/SNF related, matrix...   320  1.7e-27   1
SGD|S000000966 - symbol:CHD1 "Chromatin remodeler that re...   322  1.7e-27   1
ZFIN|ZDB-GENE-091113-61 - symbol:si:dkey-76p7.6 "si:dkey-...   319  1.8e-27   1
UNIPROTKB|F1NAD2 - symbol:SMARCAD1 "Uncharacterized prote...   319  1.8e-27   1
POMBASE|SPCC1235.05c - symbol:fft2 "fun thirty related pr...   320  2.3e-27   1
ASPGD|ASPL0000052010 - symbol:AN1255 species:162425 "Emer...   320  2.9e-27   1
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei...   315  3.2e-27   1
POMBASE|SPAC3G6.01 - symbol:hrp3 "ATP-dependent DNA helic...   318  4.2e-27   1
ASPGD|ASPL0000037473 - symbol:AN2973 species:162425 "Emer...   316  4.9e-27   1
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)...   318  5.0e-27   1
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis...   318  5.0e-27   1
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"...   318  5.0e-27   1
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei...   315  5.8e-27   1
POMBASE|SPAC1783.05 - symbol:hrp1 "ATP-dependent DNA heli...   316  6.8e-27   1
GENEDB_PFALCIPARUM|PF08_0048 - symbol:PF08_0048 "ATP-depe...   317  9.4e-27   1
UNIPROTKB|C0H4W3 - symbol:PF08_0048 "Probable ATP-depende...   317  9.4e-27   1
SGD|S000000017 - symbol:FUN30 "Snf2p family member with A...   313  1.1e-26   1
UNIPROTKB|F1P3Q4 - symbol:SMARCA1 "Uncharacterized protei...   312  1.1e-26   1
UNIPROTKB|I3LRQ2 - symbol:CHD2 "Uncharacterized protein" ...   312  1.2e-26   1
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph...   310  1.3e-26   1
UNIPROTKB|J9NSS6 - symbol:CHD2 "Uncharacterized protein" ...   312  1.8e-26   1
ASPGD|ASPL0000056677 - symbol:AN1024 species:162425 "Emer...   308  2.3e-26   1
UNIPROTKB|J9NX79 - symbol:CHD2 "Uncharacterized protein" ...   312  2.4e-26   1
ZFIN|ZDB-GENE-070705-296 - symbol:si:dkey-148b12.1 "si:dk...   309  2.5e-26   1
UNIPROTKB|I3LQZ8 - symbol:CHD2 "Uncharacterized protein" ...   312  2.5e-26   1
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s...   310  2.5e-26   1
UNIPROTKB|E1C1A9 - symbol:CHD2 "Uncharacterized protein" ...   312  2.5e-26   1
WB|WBGene00010369 - symbol:chd-1 species:6239 "Caenorhabd...   311  2.5e-26   1
UNIPROTKB|F1N8K9 - symbol:CHD1 "Chromodomain-helicase-DNA...   303  2.6e-26   1
UNIPROTKB|G3MXX3 - symbol:CHD2 "Uncharacterized protein" ...   312  2.7e-26   1
UNIPROTKB|O14647 - symbol:CHD2 "Chromodomain-helicase-DNA...   312  2.7e-26   1
UNIPROTKB|E2R5Z7 - symbol:CHD2 "Uncharacterized protein" ...   312  2.7e-26   1
UNIPROTKB|F1SA77 - symbol:CHD2 "Uncharacterized protein" ...   312  2.7e-26   1
UNIPROTKB|D4AD08 - symbol:Chd2 "Chromodomain helicase DNA...   312  2.7e-26   1
UNIPROTKB|J9PA90 - symbol:CHD2 "Uncharacterized protein" ...   312  2.7e-26   1
ZFIN|ZDB-GENE-050522-499 - symbol:smarcad1 "SWI/SNF-relat...   308  2.8e-26   1
FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227...   306  5.1e-26   1
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2...   305  6.9e-26   1
ZFIN|ZDB-GENE-050419-256 - symbol:chd2 "chromodomain heli...   307  9.1e-26   1
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd...   306  1.1e-25   1
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN...   306  1.1e-25   1
UNIPROTKB|E2QVR5 - symbol:SMARCA1 "Uncharacterized protei...   303  1.1e-25   1
ZFIN|ZDB-GENE-021025-1 - symbol:btaf1 "BTAF1 RNA polymera...   306  1.2e-25   1
DICTYBASE|DDB_G0293012 - symbol:DDB_G0293012 "CHR group p...   308  1.4e-25   1
UNIPROTKB|F1NS62 - symbol:CHD1L "Uncharacterized protein"...   301  1.4e-25   1
DICTYBASE|DDB_G0280705 - symbol:DDB_G0280705 "CHR group p...   306  1.6e-25   1
UNIPROTKB|F5H493 - symbol:ERCC6 "DNA excision repair prot...   300  1.6e-25   1
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei...   301  1.8e-25   1
UNIPROTKB|B6ZLK2 - symbol:CHD1 "Chromodomain-helicase-DNA...   303  2.3e-25   1
POMBASE|SPAC25A8.01c - symbol:fft3 "fun thirty related pr...   299  2.4e-25   1
UNIPROTKB|F1NP27 - symbol:CHD1 "Chromodomain-helicase-DNA...   303  2.4e-25   1
UNIPROTKB|F1N8K8 - symbol:CHD1 "Chromodomain-helicase-DNA...   303  2.4e-25   1
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer...   302  2.6e-25   1
UNIPROTKB|O14646 - symbol:CHD1 "Chromodomain-helicase-DNA...   302  2.9e-25   1
UNIPROTKB|E2QUI5 - symbol:CHD1 "Uncharacterized protein" ...   302  2.9e-25   1
MGI|MGI:88393 - symbol:Chd1 "chromodomain helicase DNA bi...   302  2.9e-25   1
UNIPROTKB|J9P6Y8 - symbol:CHD1 "Uncharacterized protein" ...   302  3.0e-25   1
UNIPROTKB|F1MGF2 - symbol:CHD1 "Uncharacterized protein" ...   302  3.1e-25   1
RGD|2323132 - symbol:LOC100359912 "SWI/SNF-related matrix...   296  3.4e-25   1

WARNING:  Descriptions of 442 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2051678 [details] [associations]
            symbol:ETL1 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
            evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
            KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
            RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
            SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
            EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
            TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
            ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
            Uniprot:Q9ZUL5
        Length = 763

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 131/148 (88%), Positives = 141/148 (95%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILEWTLDVIGVTYRRLDGSTQVT+RQ IVD FNND SIFACLLSTRAGGQGLNLTGA
Sbjct:   616 MLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRAGGQGLNLTGA 675

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+IHDMDFNPQIDRQAEDRCHRIGQT+PVTI+RLVTK TVDEN+YEIAKRKL+LDAAV
Sbjct:   676 DTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAV 735

Query:   121 LESGVEVDNEGDTSDKTMGEILSSILMG 148
             LESGV VD+ GDT +KTMGEIL+S+LMG
Sbjct:   736 LESGVHVDDNGDTPEKTMGEILASLLMG 763


>TAIR|locus:2087780 [details] [associations]
            symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
            binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0009910 "negative regulation of flower development"
            evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
            [GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
            formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
            response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
            cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
            evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
            [GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
            adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
            development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
            evidence=RCA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] [GO:0033043 "regulation of
            organelle organization" evidence=RCA] [GO:0045010 "actin
            nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
            evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
            [GO:0048765 "root hair cell differentiation" evidence=RCA]
            [GO:0071555 "cell wall organization" evidence=RCA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
            GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
            GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
            GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
            EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
            SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
            GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
            OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
            Uniprot:Q7X9V2
        Length = 2055

 Score = 364 (133.2 bits), Expect = 9.2e-32, P = 9.2e-32
 Identities = 68/130 (52%), Positives = 97/130 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLD+LE  +++ G TY RLDGST   ERQ ++  FN +  IF  +LSTR+GG G+NL GA
Sbjct:  1103 MLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGA 1162

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA+DRCHRIGQTR V IYRL+++ T++EN+ + A +K +LD  V
Sbjct:  1163 DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLV 1222

Query:   121 LESGVEVDNE 130
             +++G E + E
Sbjct:  1223 IQNG-EYNTE 1231


>ASPGD|ASPL0000041040 [details] [associations]
            symbol:AN9077 species:162425 "Emericella nidulans"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
            complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
            GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
            PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
            RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
            HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
        Length = 1698

 Score = 360 (131.8 bits), Expect = 1.9e-31, P = 1.9e-31
 Identities = 66/124 (53%), Positives = 93/124 (75%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLD+LE  L++ G  Y RLDG+T+V +RQ + D FNND  I A +LS+R+GG G+NLTGA
Sbjct:  1401 MLDVLEQFLNIHGHRYLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLTGA 1460

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D+D+NP +D+Q +DRCHRIGQTR V IYR V++ T++ N+   A +K +LD  V
Sbjct:  1461 DTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVV 1520

Query:   121 LESG 124
             ++ G
Sbjct:  1521 IQEG 1524


>DICTYBASE|DDB_G0267638 [details] [associations]
            symbol:DDB_G0267638 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
            GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
            ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
            KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
        Length = 3069

 Score = 360 (131.8 bits), Expect = 4.1e-31, P = 4.1e-31
 Identities = 67/124 (54%), Positives = 92/124 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDI E  L++   TY RLDGST++ +RQ + + FN D  IF  +LSTR+GG GLNLTGA
Sbjct:  1407 MLDIFETFLNLHAYTYLRLDGSTKIDKRQVLTERFNTDPKIFLFILSTRSGGLGLNLTGA 1466

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D QA+DRCHRIGQTR V IYR +T+ T++EN+ + + +K  LD  V
Sbjct:  1467 DTVIFYDTDWNPSMDAQAQDRCHRIGQTREVNIYRFITQHTIEENILKKSNQKRQLDKMV 1526

Query:   121 LESG 124
             +++G
Sbjct:  1527 IKAG 1530


>UNIPROTKB|J9P9W7 [details] [associations]
            symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR017956
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
            GO:GO:0004386 GeneTree:ENSGT00530000063427 EMBL:AAEX03004381
            EMBL:AAEX03004385 EMBL:AAEX03004386 EMBL:AAEX03004382
            EMBL:AAEX03004383 EMBL:AAEX03004384 EMBL:AAEX03004387
            EMBL:AAEX03004388 Ensembl:ENSCAFT00000045283 OMA:PATANNS
            Uniprot:J9P9W7
        Length = 1470

 Score = 356 (130.4 bits), Expect = 4.1e-31, P = 4.1e-31
 Identities = 70/124 (56%), Positives = 92/124 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLD+LE  L   G  Y RLDGST+V +RQA+++ FN D  IF  +LSTR+GG G+NLTGA
Sbjct:   314 MLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGA 373

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTVV +D D+NP +D QA+DRCHRIGQTR V IYRL+++ TV+EN+ + A +K +L    
Sbjct:   374 DTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMA 433

Query:   121 LESG 124
             +E G
Sbjct:   434 IEGG 437


>DICTYBASE|DDB_G0267556 [details] [associations]
            symbol:DDB_G0267556 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
            GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
            EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
            InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
            Uniprot:Q55GQ9
        Length = 1159

 Score = 353 (129.3 bits), Expect = 5.9e-31, P = 5.9e-31
 Identities = 73/145 (50%), Positives = 99/145 (68%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LDILE  LD+ G  + RLDGST V ERQ+I+D F++  +I   LLST +GG G+NLT A
Sbjct:  1013 VLDILEDVLDIFGYNFTRLDGSTPVNERQSIIDHFSSKETIPVFLLSTNSGGLGINLTCA 1072

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V+ +D+ FNPQ+DRQAEDR HR+GQ R V IY+L+ + TVD N++E A +K  L+  V
Sbjct:  1073 NVVIFYDLSFNPQVDRQAEDRAHRLGQEREVIIYKLLAENTVDINIHESANQKKKLNDNV 1132

Query:   121 LESGVEVDNEGDTSDKTMGEILSSI 145
             LE G   + E     K + +IL SI
Sbjct:  1133 LEEGTFNNAETKLQSKNILKILDSI 1157


>RGD|1565642 [details] [associations]
            symbol:Srcap "Snf2-related CREBBP activator protein"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
            [GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
            GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
            IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
            ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
        Length = 3182

 Score = 356 (130.4 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/124 (56%), Positives = 92/124 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLD+LE  L   G  Y RLDGST+V +RQA+++ FN D  IF  +LSTR+GG G+NLTGA
Sbjct:  2059 MLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGA 2118

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTVV +D D+NP +D QA+DRCHRIGQTR V IYRL+++ TV+EN+ + A +K +L    
Sbjct:  2119 DTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMA 2178

Query:   121 LESG 124
             +E G
Sbjct:  2179 IEGG 2182


>UNIPROTKB|Q6ZRS2 [details] [associations]
            symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
            "protein complex" evidence=IDA] [GO:0003713 "transcription
            coactivator activity" evidence=TAS] [GO:0004402 "histone
            acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=TAS]
            [GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
            GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
            PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
            GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
            EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
            EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
            RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
            SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
            PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
            DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
            Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
            KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
            GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
            HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
            Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
            InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
            ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
            Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
        Length = 3230

 Score = 356 (130.4 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/124 (56%), Positives = 92/124 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLD+LE  L   G  Y RLDGST+V +RQA+++ FN D  IF  +LSTR+GG G+NLTGA
Sbjct:  2071 MLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGA 2130

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTVV +D D+NP +D QA+DRCHRIGQTR V IYRL+++ TV+EN+ + A +K +L    
Sbjct:  2131 DTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMA 2190

Query:   121 LESG 124
             +E G
Sbjct:  2191 IEGG 2194


>UNIPROTKB|F1RG74 [details] [associations]
            symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
            GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
            GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
            Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
        Length = 3230

 Score = 356 (130.4 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 70/124 (56%), Positives = 92/124 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLD+LE  L   G  Y RLDGST+V +RQA+++ FN D  IF  +LSTR+GG G+NLTGA
Sbjct:  2071 MLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGA 2130

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTVV +D D+NP +D QA+DRCHRIGQTR V IYRL+++ TV+EN+ + A +K +L    
Sbjct:  2131 DTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMA 2190

Query:   121 LESG 124
             +E G
Sbjct:  2191 IEGG 2194


>UNIPROTKB|E1BC33 [details] [associations]
            symbol:LOC788113 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
            PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
            PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
            EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
            Uniprot:E1BC33
        Length = 3242

 Score = 356 (130.4 bits), Expect = 1.2e-30, P = 1.2e-30
 Identities = 70/124 (56%), Positives = 92/124 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLD+LE  L   G  Y RLDGST+V +RQA+++ FN D  IF  +LSTR+GG G+NLTGA
Sbjct:  2082 MLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGA 2141

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTVV +D D+NP +D QA+DRCHRIGQTR V IYRL+++ TV+EN+ + A +K +L    
Sbjct:  2142 DTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMA 2201

Query:   121 LESG 124
             +E G
Sbjct:  2202 IEGG 2205


>WB|WBGene00010845 [details] [associations]
            symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
            ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
            GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
            GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
            RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
            EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
            WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
        Length = 989

 Score = 349 (127.9 bits), Expect = 1.2e-30, P = 1.2e-30
 Identities = 68/126 (53%), Positives = 94/126 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L++ G +Y+RLDG T V +RQ +++ FN    +F  LLSTRAGG G+NLT A
Sbjct:   781 MLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSA 840

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + ++IHD+DFNP  D+QAEDRCHR+GQ +PV + RLV+KGTV+  +  +AK+KL L+  V
Sbjct:   841 NHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQV 900

Query:   121 LESGVE 126
              + GV+
Sbjct:   901 TD-GVK 905


>POMBASE|SPAC11E3.01c [details] [associations]
            symbol:swr1 "SNF2 family helicase Swr1" species:4896
            "Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
            "ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
            EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
            GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
            OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
            ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
            GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
            Uniprot:O13682
        Length = 1288

 Score = 345 (126.5 bits), Expect = 5.0e-30, P = 5.0e-30
 Identities = 66/124 (53%), Positives = 92/124 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LDILE  L++ G  Y RLDG+T++ +RQ + + FNND  I   +LSTR+GG G+NLTGA
Sbjct:  1019 VLDILEQFLNIHGHRYLRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGA 1078

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NPQ+D QA+DR HRIGQTR V IYRL+++ TV+ N+   A +K +LD  V
Sbjct:  1079 DTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIV 1138

Query:   121 LESG 124
             ++ G
Sbjct:  1139 IQGG 1142


>FB|FBgn0032157 [details] [associations]
            symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
            melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
            GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 KO:K14439
            GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
            RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
            UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
            STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
            KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
            InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
            Bgee:Q9VL72 Uniprot:Q9VL72
        Length = 844

 Score = 341 (125.1 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 67/117 (57%), Positives = 86/117 (73%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDI+E  L +    + RLDG+T V  RQ ++  FN D SIF  LLST+AGG G+NLT A
Sbjct:   680 MLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAA 739

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
             DT VIHD+DFNP  D+QAEDRCHR+GQ RPVTIYRL+++ T++E +   A+ KL L+
Sbjct:   740 DTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLE 796


>FB|FBgn0020306 [details] [associations]
            symbol:dom "domino" species:7227 "Drosophila melanogaster"
            [GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
            proliferation" evidence=NAS] [GO:0016458 "gene silencing"
            evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=ISS] [GO:0002165 "instar larval or pupal development"
            evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
            [GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
            proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
            evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
            mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
            acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
            regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
            "wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
            regulation of gene expression" evidence=IMP] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0070983 "dendrite guidance"
            evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
            "positive regulation of gene silencing by miRNA" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
            GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
            GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
            GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
            GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
            PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
            EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
            ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
            PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
            KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
            GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
            OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
            NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
            Uniprot:Q9NDJ2
        Length = 3198

 Score = 348 (127.6 bits), Expect = 8.0e-30, P = 8.0e-30
 Identities = 67/124 (54%), Positives = 91/124 (73%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLD+LE  L+  G  Y RLDGST+V +RQ +++ FN D  IF  +LSTR+GG G+NLTGA
Sbjct:  1686 MLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGA 1745

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D QA+DRCHRIGQTR V IYRLV++ T++ N+ + A +K +L    
Sbjct:  1746 DTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMA 1805

Query:   121 LESG 124
             +E G
Sbjct:  1806 IEGG 1809


>RGD|1309820 [details] [associations]
            symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
            norvegicus" [GO:0000775 "chromosome, centromeric region"
            evidence=ISO] [GO:0001655 "urogenital system development"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
            evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
            [GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=ISO]
            [GO:0007275 "multicellular organismal development" evidence=ISO]
            [GO:0010216 "maintenance of DNA methylation" evidence=ISO]
            [GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
            PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
            GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
            Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
        Length = 494

 Score = 327 (120.2 bits), Expect = 2.5e-29, P = 2.5e-29
 Identities = 65/116 (56%), Positives = 83/116 (71%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL     +   T+ RLDGS   +ER+  + +FN D  +F  L+STRAGG G+NLT A
Sbjct:   283 MLDILMDYCHLRNFTFSRLDGSMSYSEREKNIYSFNTDPEVFLFLVSTRAGGLGINLTAA 342

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
             DTV+I+D D+NPQ D QA+DRCHRIGQT+PV +YRLVT  T+D+ + E   AKRKL
Sbjct:   343 DTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 398


>WB|WBGene00007027 [details] [associations]
            symbol:ssl-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
            GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
            GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
            EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
            RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
            UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
            MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
            GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
            WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
            WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
            ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
        Length = 2395

 Score = 338 (124.0 bits), Expect = 6.5e-29, P = 6.5e-29
 Identities = 66/125 (52%), Positives = 93/125 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLD+L+  L   G  Y RLDG+T V +RQA+++ FN D  +F  +LSTR+GG G+NLTGA
Sbjct:  1216 MLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLTGA 1275

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLIL-DAA 119
             DTV+ +D D+NP +D QA+DRCHRIGQTR V+IYRL+++ T++EN+   A +K  L + A
Sbjct:  1276 DTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELA 1335

Query:   120 VLESG 124
             + E+G
Sbjct:  1336 IDEAG 1340


>UNIPROTKB|Q9NW36 [details] [associations]
            symbol:HELLS "cDNA FLJ10339 fis, clone NT2RM2000740, weakly
            similar to POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0004386 EMBL:AL138759 UniGene:Hs.655830
            HGNC:HGNC:4861 ChiTaRS:HELLS EMBL:AK001201 IPI:IPI00012073
            SMR:Q9NW36 STRING:Q9NW36 Ensembl:ENST00000371327
            HOGENOM:HOG000198825 HOVERGEN:HBG072129 Uniprot:Q9NW36
        Length = 310

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 64/116 (55%), Positives = 82/116 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL     +    + RLDGS   +ER+  + +FN D  +F  L+STRAGG G+NLT A
Sbjct:    64 MLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAA 123

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
             DTV+I+D D+NPQ D QA+DRCHRIGQT+PV +YRLVT  T+D+ + E   AKRKL
Sbjct:   124 DTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 179


>SGD|S000002742 [details] [associations]
            symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
            the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0006338 "chromatin
            remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
            activity" evidence=IMP] [GO:0043486 "histone exchange"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
            SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
            GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
            GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
            EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
            PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
            DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
            PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
            CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
            GermOnline:YDR334W Uniprot:Q05471
        Length = 1514

 Score = 334 (122.6 bits), Expect = 9.5e-29, P = 9.5e-29
 Identities = 61/124 (49%), Positives = 90/124 (72%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LD+LE  L+  G  Y RLDG+T++ +RQ + + FN D+ I   +LS+R+GG G+NLTGA
Sbjct:  1274 VLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGA 1333

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+Q +DRCHRIGQTR V IYR V++ T++ N+ + A +K  LD  V
Sbjct:  1334 DTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVV 1393

Query:   121 LESG 124
             ++ G
Sbjct:  1394 IQEG 1397


>CGD|CAL0001763 [details] [associations]
            symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
            "Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
            activity" evidence=IEA] [GO:0043486 "histone exchange"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
            CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
            RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
            PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
            KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
        Length = 1641

 Score = 334 (122.6 bits), Expect = 1.1e-28, P = 1.1e-28
 Identities = 62/124 (50%), Positives = 89/124 (71%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LDILE  L++ G  Y RLDG+T++ +RQ + + FN D  I   +LSTR+GG G+NLTGA
Sbjct:  1394 VLDILEQFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLTGA 1453

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+Q +DRCHRIGQ R V IYR V++ T++ N+ + A +K  LD  V
Sbjct:  1454 DTVIFYDSDWNPAMDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVV 1513

Query:   121 LESG 124
             ++ G
Sbjct:  1514 IQEG 1517


>DICTYBASE|DDB_G0292358 [details] [associations]
            symbol:ino80 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
            repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
            GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
            GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
            STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
            GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
            ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
        Length = 2129

 Score = 335 (123.0 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 68/146 (46%), Positives = 98/146 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M++ILE  +      Y RLDGS+++ +R+ +VD F +D SIFA LLSTRA G G+NLT A
Sbjct:  1795 MINILEDFMIFRKYKYLRLDGSSKLDDRRDMVDDFQSDPSIFAFLLSTRACGIGINLTSA 1854

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D QA+DR HR+GQTRPVT+YRL+TK T++E + + AK+K  + + V
Sbjct:  1855 DTVIFYDSDWNPTVDEQAQDRAHRLGQTRPVTVYRLITKNTIEEKILKRAKQKHQIQSIV 1914

Query:   121 LESGVEVDNEGDTSDKTMGEILSSIL 146
             +  G    N  +       E +S +L
Sbjct:  1915 IAGGKFESNPEELDQVGENEAISFLL 1940


>UNIPROTKB|F1P5V4 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0001655 "urogenital system development"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
            heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
            chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
            methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
            assembly" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
            proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
            GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
            EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
            Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
        Length = 839

 Score = 326 (119.8 bits), Expect = 2.5e-28, P = 2.5e-28
 Identities = 65/116 (56%), Positives = 83/116 (71%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL     + G  + RLDGS   ++R+  +  FNND  +F  L+STRAGG G+NLT A
Sbjct:   627 MLDILMDYCYLRGFKFSRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRAGGLGINLTAA 686

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
             DTV+I+D D+NPQ D QA+DRCHRIGQT+PV +YRLVT  T+D+ + E   AKRKL
Sbjct:   687 DTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 742


>UNIPROTKB|E2RG62 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
            evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
            [GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
            "nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035861 "site of
            double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0000018 "regulation of DNA recombination" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
            GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
            EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
        Length = 1026

 Score = 327 (120.2 bits), Expect = 2.9e-28, P = 2.9e-28
 Identities = 69/146 (47%), Positives = 101/146 (69%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L      Y RLDG TQ++ER  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   882 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 941

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V++HD+D NP  D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL L+   
Sbjct:   942 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE--- 998

Query:   121 LESGVEVDNEGDTSDKTMGEILSSIL 146
              +    VD EGD  + TM   ++++L
Sbjct:   999 -QDMTTVD-EGD--EGTMPADIATLL 1020


>UNIPROTKB|J9NX47 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
            EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
            Uniprot:J9NX47
        Length = 1026

 Score = 327 (120.2 bits), Expect = 2.9e-28, P = 2.9e-28
 Identities = 69/146 (47%), Positives = 101/146 (69%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L      Y RLDG TQ++ER  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   882 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 941

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V++HD+D NP  D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL L+   
Sbjct:   942 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE--- 998

Query:   121 LESGVEVDNEGDTSDKTMGEILSSIL 146
              +    VD EGD  + TM   ++++L
Sbjct:   999 -QDMTTVD-EGD--EGTMPADIATLL 1020


>UNIPROTKB|J9PA79 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
            OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
            Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
        Length = 1026

 Score = 327 (120.2 bits), Expect = 2.9e-28, P = 2.9e-28
 Identities = 69/146 (47%), Positives = 101/146 (69%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L      Y RLDG TQ++ER  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   882 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 941

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V++HD+D NP  D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL L+   
Sbjct:   942 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE--- 998

Query:   121 LESGVEVDNEGDTSDKTMGEILSSIL 146
              +    VD EGD  + TM   ++++L
Sbjct:   999 -QDMTTVD-EGD--EGTMPADIATLL 1020


>UNIPROTKB|F1RWW3 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
            "chromosome separation" evidence=IEA] [GO:0043596 "nuclear
            replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035861 "site of
            double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0000018 "regulation of DNA recombination" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
            GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
            EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
        Length = 1029

 Score = 327 (120.2 bits), Expect = 2.9e-28, P = 2.9e-28
 Identities = 64/128 (50%), Positives = 91/128 (71%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L      Y RLDG TQ++ER  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   885 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 944

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLIL--DA 118
             + V++HD+D NP  D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL L  D 
Sbjct:   945 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1004

Query:   119 AVLESGVE 126
               ++ G E
Sbjct:  1005 TTIDEGDE 1012


>UNIPROTKB|E1BCV0 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
            evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
            OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
            GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
            EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
            Uniprot:E1BCV0
        Length = 816

 Score = 325 (119.5 bits), Expect = 3.0e-28, P = 3.0e-28
 Identities = 65/116 (56%), Positives = 81/116 (69%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL          + RLDGS   +ER+  + +FN D  +F  L+STRAGG G+NLT A
Sbjct:   605 MLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNTDPDVFIFLVSTRAGGLGINLTAA 664

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
             DTV+I+D D+NPQ D QA+DRCHRIGQTRPV +YRLVT  T+D+ + E   AKRKL
Sbjct:   665 DTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIVERAAAKRKL 720


>POMBASE|SPAC20G8.08c [details] [associations]
            symbol:fft1 "fun thirty related protein Fft1
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
            "nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
            GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
            GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
            ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
            GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
            NextBio:20803065 Uniprot:P87114
        Length = 944

 Score = 326 (119.8 bits), Expect = 3.2e-28, P = 3.2e-28
 Identities = 67/147 (45%), Positives = 97/147 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LDILE+ L+ + + + RLDGST V  RQ ++D F+ + +    LLST++GG G+NLT A
Sbjct:   792 VLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENYKVFLLSTKSGGFGINLTCA 851

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V++ D  FNP  D QAEDR HR+GQTRPV +YRL+TK T++EN+  +A  KL      
Sbjct:   852 NIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRLANTKL-----T 906

Query:   121 LESGVEVDNEGDTSDKTMGEILSSILM 147
             LES +  D+E     +  GE++ S+ M
Sbjct:   907 LESSLTTDSE-KIQKEISGELMKSLQM 932


>UNIPROTKB|Q9H4L7 [details] [associations]
            symbol:SMARCAD1 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A containing
            DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0009117 "nucleotide metabolic process" evidence=NAS]
            [GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
            "nuclear matrix" evidence=NAS] [GO:0051260 "protein
            homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
            recombination" evidence=IEP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
            modification" evidence=NAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
            "DNA double-strand break processing" evidence=IMP] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
            "site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
            replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
            [GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
            "histone H4 deacetylation" evidence=IMP] [GO:0000792
            "heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
            GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
            GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
            HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
            OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
            EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
            EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
            RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
            RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
            SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
            PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
            Ensembl:ENST00000359052 Ensembl:ENST00000457823
            Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
            UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
            HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
            neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
            HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
            ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
            Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
        Length = 1026

 Score = 326 (119.8 bits), Expect = 3.7e-28, P = 3.7e-28
 Identities = 64/128 (50%), Positives = 91/128 (71%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L      Y RLDG TQ++ER  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   882 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 941

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLIL--DA 118
             + V++HD+D NP  D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL L  D 
Sbjct:   942 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1001

Query:   119 AVLESGVE 126
               ++ G E
Sbjct:  1002 TTVDEGDE 1009


>UNIPROTKB|F1SC64 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
            evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
            OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
            GeneTree:ENSGT00550000075106 EMBL:CU468514
            Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
        Length = 838

 Score = 324 (119.1 bits), Expect = 4.1e-28, P = 4.1e-28
 Identities = 65/116 (56%), Positives = 81/116 (69%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL          + RLDGS   TER+  + +FN D  +F  L+STRAGG G+NLT A
Sbjct:   627 MLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAA 686

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
             DTV+I+D D+NPQ D QA+DRCHRIGQT+PV +YRLVT  T+D+ + E   AKRKL
Sbjct:   687 DTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 742


>MGI|MGI:95453 [details] [associations]
            symbol:Smarcad1 "SWI/SNF-related, matrix-associated
            actin-dependent regulator of chromatin, subfamily a, containing
            DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
            of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000729 "DNA double-strand break
            processing" evidence=ISO] [GO:0000792 "heterochromatin"
            evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
            "response to DNA damage stimulus" evidence=IEA] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0035861 "site of double-strand break"
            evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
            [GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
            "histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
            deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
            KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
            CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
            EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
            IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
            UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
            PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
            Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
            UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
            NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
            GermOnline:ENSMUSG00000029920 Uniprot:Q04692
        Length = 1021

 Score = 323 (118.8 bits), Expect = 7.6e-28, P = 7.6e-28
 Identities = 61/117 (52%), Positives = 87/117 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L      Y RLDG TQ++ER  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   877 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 936

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
             + V++HD+D NP  D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL L+
Sbjct:   937 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 993


>RGD|1309640 [details] [associations]
            symbol:Smarcad1 "SWI/SNF-related, matrix-associated
            actin-dependent regulator of chromatin, subfamily a, containing
            DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
            "regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
            "DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
            "heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
            evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
            evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
            evidence=IEA;ISO] [GO:0051304 "chromosome separation"
            evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
            evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
            evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
            SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
            GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
            OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
            RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
            Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
            UCSC:RGD:1309640 Uniprot:D3Z9Z9
        Length = 1024

 Score = 323 (118.8 bits), Expect = 7.7e-28, P = 7.7e-28
 Identities = 61/117 (52%), Positives = 87/117 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L      Y RLDG TQ++ER  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   880 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 939

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
             + V++HD+D NP  D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL L+
Sbjct:   940 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 996


>UNIPROTKB|E1B7X9 [details] [associations]
            symbol:SMARCAD1 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A containing
            DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
            double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
            break processing" evidence=ISS] [GO:0070933 "histone H4
            deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
            "heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
            evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
            DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
            GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
            GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
            GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
            UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
            Uniprot:E1B7X9
        Length = 1028

 Score = 323 (118.8 bits), Expect = 7.7e-28, P = 7.7e-28
 Identities = 64/128 (50%), Positives = 90/128 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L      Y RLDG TQ++ER  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   884 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 943

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLIL--DA 118
             + V++HD+D NP  D+QAEDRCHR+GQT+ V + +L+ +GT++E++ +I ++KL L  D 
Sbjct:   944 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDM 1003

Query:   119 AVLESGVE 126
               ++ G E
Sbjct:  1004 TTVDEGDE 1011


>MGI|MGI:106209 [details] [associations]
            symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000775 "chromosome, centromeric region" evidence=IDA]
            [GO:0001655 "urogenital system development" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005721 "centromeric heterochromatin"
            evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
            [GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=IMP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
            "mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IMP] [GO:0010216 "maintenance of DNA
            methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0030098 "lymphocyte differentiation"
            evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
            GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
            GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
            GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
            GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
            OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
            EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
            IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
            UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
            SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
            STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
            DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
            UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
            NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
            GermOnline:ENSMUSG00000025001 Uniprot:Q60848
        Length = 821

 Score = 321 (118.1 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 64/116 (55%), Positives = 82/116 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL     +    + RLDGS   +ER+  + +FN D  +F  L+STRAGG G+NLT A
Sbjct:   610 MLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINLTAA 669

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
             DTV+I+D D+NPQ D QA+DRCHRIGQT+PV +YRLVT  T+D+ + E   AKRKL
Sbjct:   670 DTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 725


>UNIPROTKB|Q9NRZ9 [details] [associations]
            symbol:HELLS "Lymphoid-specific helicase" species:9606
            "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
            division" evidence=IEA] [GO:0001655 "urogenital system development"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
            "centromeric heterochromatin" evidence=ISS] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=ISS]
            [GO:0007275 "multicellular organismal development" evidence=ISS]
            [GO:0010216 "maintenance of DNA methylation" evidence=ISS]
            [GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
            [GO:0000775 "chromosome, centromeric region" evidence=ISS]
            [GO:0046651 "lymphocyte proliferation" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
            EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
            GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
            GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
            EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
            EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
            EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
            EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
            IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
            IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
            IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
            ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
            PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
            DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
            Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
            KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
            CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
            HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
            HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
            GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
            Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
        Length = 838

 Score = 321 (118.1 bits), Expect = 8.6e-28, P = 8.6e-28
 Identities = 64/116 (55%), Positives = 82/116 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL     +    + RLDGS   +ER+  + +FN D  +F  L+STRAGG G+NLT A
Sbjct:   627 MLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAA 686

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
             DTV+I+D D+NPQ D QA+DRCHRIGQT+PV +YRLVT  T+D+ + E   AKRKL
Sbjct:   687 DTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 742


>UNIPROTKB|Q5FWR0 [details] [associations]
            symbol:smarcad1 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A containing
            DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
            [GO:0000729 "DNA double-strand break processing" evidence=ISS]
            [GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
            GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
            HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
            EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
            RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
            GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
            InParanoid:Q5FWR0 Uniprot:Q5FWR0
        Length = 1003

 Score = 322 (118.4 bits), Expect = 9.5e-28, P = 9.5e-28
 Identities = 67/146 (45%), Positives = 99/146 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDI+E  L      Y RLDG TQ++ER  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   859 MLDIIEVFLRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSA 918

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V++HD+D NP  D+QAEDRCHR+GQT+ V + +L+ KGT++E++ +I+++KL L+  +
Sbjct:   919 NIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQDM 978

Query:   121 LESGVEVDNEGDTSDKTMGEILSSIL 146
               +  +  +EG T    M  +L + L
Sbjct:   979 TTN--DTGDEG-TIPLDMATLLKTSL 1001


>UNIPROTKB|E2QW28 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
            GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
            Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
        Length = 839

 Score = 320 (117.7 bits), Expect = 1.1e-27, P = 1.1e-27
 Identities = 64/116 (55%), Positives = 81/116 (69%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL          + RLDGS   +ER+  + +FN D  +F  L+STRAGG G+NLT A
Sbjct:   628 MLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAA 687

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
             DTV+I+D D+NPQ D QA+DRCHRIGQT+PV +YRLVT  T+D+ + E   AKRKL
Sbjct:   688 DTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 743


>UNIPROTKB|Q9ULG1 [details] [associations]
            symbol:INO80 "DNA helicase INO80" species:9606 "Homo
            sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
            [GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
            response to UV" evidence=IMP] [GO:0000724 "double-strand break
            repair via homologous recombination" evidence=IMP] [GO:0070914
            "UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
            response to ionizing radiation" evidence=IMP] [GO:0006302
            "double-strand break repair" evidence=IMP] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0030307 "positive regulation of cell growth"
            evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
            cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
            replication involved in S phase" evidence=IMP] [GO:0043014
            "alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
            assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
            GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
            GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
            GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
            GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
            GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
            EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
            RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
            SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
            PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
            Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
            KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
            HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
            HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
            OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
            ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
            Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
        Length = 1556

 Score = 324 (119.1 bits), Expect = 1.1e-27, P = 1.1e-27
 Identities = 62/124 (50%), Positives = 87/124 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D+LE  +     TY RLDGS++++ER+ +V  F N   IF  LLSTRAGG G+NLT A
Sbjct:  1129 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAA 1188

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K  +   V
Sbjct:  1189 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1248

Query:   121 LESG 124
             +  G
Sbjct:  1249 ISGG 1252


>UNIPROTKB|F1PKX5 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000045 "regulation of G1/S transition of
            mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
            ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
            repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
            binding" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
            "positive regulation of cell growth" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
            DNA replication involved in S phase" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
            GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
            GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
            GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
            GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
            Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
            Uniprot:F1PKX5
        Length = 1560

 Score = 324 (119.1 bits), Expect = 1.1e-27, P = 1.1e-27
 Identities = 62/124 (50%), Positives = 87/124 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D+LE  +     TY RLDGS++++ER+ +V  F N   IF  LLSTRAGG G+NLT A
Sbjct:  1133 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAA 1192

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K  +   V
Sbjct:  1193 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1252

Query:   121 LESG 124
             +  G
Sbjct:  1253 ISGG 1256


>UNIPROTKB|F1NYY9 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0010571 "positive
            regulation of DNA replication involved in S phase" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
            regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
            complex" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
            assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
            evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
            evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
            cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0000724 "double-strand break repair
            via homologous recombination" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
            GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
            GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
            GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
            GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
            Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
        Length = 1564

 Score = 324 (119.1 bits), Expect = 1.2e-27, P = 1.2e-27
 Identities = 62/124 (50%), Positives = 87/124 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D+LE  +     TY RLDGS++++ER+ +V  F N   IF  LLSTRAGG G+NLT A
Sbjct:  1137 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAA 1196

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K  +   V
Sbjct:  1197 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1256

Query:   121 LESG 124
             +  G
Sbjct:  1257 ISGG 1260


>UNIPROTKB|F1SSV0 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
            cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
            radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
            binding" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
            "positive regulation of cell growth" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
            DNA replication involved in S phase" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
            GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
            GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
            GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
            GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
            Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
            Uniprot:F1SSV0
        Length = 1566

 Score = 324 (119.1 bits), Expect = 1.2e-27, P = 1.2e-27
 Identities = 62/124 (50%), Positives = 87/124 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D+LE  +     TY RLDGS++++ER+ +V  F N   IF  LLSTRAGG G+NLT A
Sbjct:  1139 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAA 1198

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K  +   V
Sbjct:  1199 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1258

Query:   121 LESG 124
             +  G
Sbjct:  1259 ISGG 1262


>ZFIN|ZDB-GENE-041014-72 [details] [associations]
            symbol:ino80 "INO80 homolog (S. cerevisiae)"
            species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
            HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
            UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
            InParanoid:Q5RGG8 Uniprot:Q5RGG8
        Length = 1582

 Score = 324 (119.1 bits), Expect = 1.2e-27, P = 1.2e-27
 Identities = 62/124 (50%), Positives = 88/124 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D+LE  +     TY RLDGS++++ER+ +V  F + T IF  LLSTRAGG G+NLT A
Sbjct:  1160 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAA 1219

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K  +   V
Sbjct:  1220 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1279

Query:   121 LESG 124
             +  G
Sbjct:  1280 ISGG 1283


>MGI|MGI:1935127 [details] [associations]
            symbol:Smarca1 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
            remodeling" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
            development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
            acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
            [GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
            neural precursor cell proliferation" evidence=IGI;IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
            GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
            CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
            EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
            RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
            ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
            PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
            Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
            Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
            UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
            NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
            GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
        Length = 1046

 Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 70/149 (46%), Positives = 96/149 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +LDILE      G  Y RLDG T   ER+  +DAFN  ++S F  +LSTRAGG G+NL  
Sbjct:   518 LLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLAS 577

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + E A+ KL LD+ 
Sbjct:   578 ADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSI 637

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  +D + +   K   E+L  I  G
Sbjct:   638 VIQQGRLIDQQSNKLAKE--EMLQMIRHG 664


>SGD|S000000966 [details] [associations]
            symbol:CHD1 "Chromatin remodeler that regulates various
            aspects of transcription" species:4932 "Saccharomyces cerevisiae"
            [GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
            "nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
            complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IDA] [GO:0001178 "regulation of transcriptional start site
            selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
            "negative regulation of histone H3-K9 acetylation" evidence=IMP]
            [GO:0071441 "negative regulation of histone H3-K14 acetylation"
            evidence=IMP] [GO:0006368 "transcription elongation from RNA
            polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
            chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
            evidence=IDA] [GO:0016584 "nucleosome positioning"
            evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
            [GO:0006369 "termination of RNA polymerase II transcription"
            evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
            lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0035064 "methylated histone residue binding" evidence=IDA]
            [GO:2000104 "negative regulation of DNA-dependent DNA replication"
            evidence=IGI] [GO:0006363 "termination of RNA polymerase I
            transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
            GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
            GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
            GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
            GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
            PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
            PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
            ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
            MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
            EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
            OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
            EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
            GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
            GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
        Length = 1468

 Score = 322 (118.4 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 73/148 (49%), Positives = 99/148 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             MLDIL   L + G+ ++RLDG+    +R+  +D FN+ D++ F  LLSTRAGG G+NL  
Sbjct:   723 MLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT 782

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA  R HRIGQ   V +YRLV+K TV+E V E A++K+IL+ A
Sbjct:   783 ADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYA 842

Query:   120 VLESGVEVDNE-GDTSDKTMGEILSSIL 146
             ++  GV   N+    ++   GE LS+IL
Sbjct:   843 IISLGVTDGNKYTKKNEPNAGE-LSAIL 869


>ZFIN|ZDB-GENE-091113-61 [details] [associations]
            symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
            "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=ISS]
            [GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
            damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
            GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
            EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
            Bgee:E7F1C4 Uniprot:E7F1C4
        Length = 954

 Score = 319 (117.4 bits), Expect = 1.8e-27, P = 1.8e-27
 Identities = 67/146 (45%), Positives = 93/146 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L      Y RLDGST +++R  ++D FN D  IF  LLSTRAGG G+NLT A
Sbjct:   810 MLDILEVFLRHHKHRYNRLDGSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSA 869

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V++HD+D NP  D+QAE RCHR+GQT+ V + +L++K ++++ +  I +RKL L+   
Sbjct:   870 NVVILHDIDCNPYNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQ-- 927

Query:   121 LESGVEVDNEGDTSDKTMGEILSSIL 146
              E     D E DT    M  +L + L
Sbjct:   928 -EMTATQDGEEDTLPDDMTTLLKASL 952


>UNIPROTKB|F1NAD2 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
            DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
            break processing" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
            "site of double-strand break" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
            "nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
            separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
            GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
            EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
            EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
            Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
        Length = 963

 Score = 319 (117.4 bits), Expect = 1.8e-27, P = 1.8e-27
 Identities = 62/131 (47%), Positives = 93/131 (70%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LDILE  L      Y RLDG TQ+++R  ++D FN D  IF  LLST+AGG G+NLT A
Sbjct:   819 VLDILEVFLKHWQHRYIRLDGKTQISDRIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 878

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V++HD+D NP  D+QAEDRCHR+GQTR V + +L++KGT++E++ ++ ++KL L+  +
Sbjct:   879 NVVILHDIDCNPYNDKQAEDRCHRVGQTREVKVIKLISKGTIEESMLKMNQQKLKLEQDM 938

Query:   121 LESGVEVDNEG 131
               +  ++  EG
Sbjct:   939 --TAADLGEEG 947


>POMBASE|SPCC1235.05c [details] [associations]
            symbol:fft2 "fun thirty related protein Fft2
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
            "nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
            [GO:0051276 "chromosome organization" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
            GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
            GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
            ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
            GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
            Uniprot:O74842
        Length = 1284

 Score = 320 (117.7 bits), Expect = 2.3e-27, P = 2.3e-27
 Identities = 62/132 (46%), Positives = 89/132 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  LD + ++Y RLDGSTQV  RQ I+D F+ +  +   LLST+AGG G+NL  A
Sbjct:   952 MLDILEQVLDTLKISYVRLDGSTQVEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINLACA 1011

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V+++D  +NP  D QAEDR HR+GQ R VT+ RL+T  T++E + ++A  KL LD ++
Sbjct:  1012 NVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDMSL 1071

Query:   121 LESGVEVDNEGD 132
                G + +  G+
Sbjct:  1072 SSDGKDREEIGE 1083


>ASPGD|ASPL0000052010 [details] [associations]
            symbol:AN1255 species:162425 "Emericella nidulans"
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
            "mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IEA]
            [GO:0060303 "regulation of nucleosome density" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
            ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
            EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
            OMA:GPRRMAI Uniprot:Q5BDX5
        Length = 1517

 Score = 320 (117.7 bits), Expect = 2.9e-27, P = 2.9e-27
 Identities = 70/147 (47%), Positives = 97/147 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             MLDIL   ++  G TY+RLDG+     R+  ++ +N  D+S FA +LSTRAGG G+NL  
Sbjct:   784 MLDILGDYMEYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSDFAFILSTRAGGLGINLMT 843

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV++ D D+NPQ D QA  R HRIGQT+PV++YRLV+K TV+E V E A+ KL+L+  
Sbjct:   844 ADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFI 903

Query:   120 VLESGV------EVDNEGDTSDKTMGE 140
              ++ GV      E+ N+      T+GE
Sbjct:   904 TIQRGVTDKEASEIQNKMARGGITLGE 930


>UNIPROTKB|I3LTT5 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 EMBL:CU695129
            Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
        Length = 778

 Score = 315 (115.9 bits), Expect = 3.2e-27, P = 3.2e-27
 Identities = 69/149 (46%), Positives = 96/149 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFN-NDTSIFACLLSTRAGGQGLNLTG 59
             +LDILE      G  Y RLDG T   ER+  ++AFN  ++S F  +LSTRAGG G+NL  
Sbjct:   517 LLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLAS 576

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + E A+ KL LD+ 
Sbjct:   577 ADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSI 636

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  +D + +   K   E+L  I  G
Sbjct:   637 VIQQGRLIDQQSNKMAKE--EMLQMIRHG 663


>POMBASE|SPAC3G6.01 [details] [associations]
            symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
            species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
            chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
            "DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IMP]
            [GO:0031934 "mating-type region heterochromatin" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
            nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
            at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
            GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
            GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
            GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
            OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
            ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
            EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
            OMA:HINGSST NextBio:20804092 Uniprot:O14139
        Length = 1388

 Score = 318 (117.0 bits), Expect = 4.2e-27, P = 4.2e-27
 Identities = 71/147 (48%), Positives = 94/147 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             MLDIL   L + G  ++RLDG+     R+  +D FN   S  F  LLSTRAGG G+NL  
Sbjct:   718 MLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMT 777

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NPQ D QA  R HRIGQ   V +YRL++K T++E+V E A+RK+IL+ A
Sbjct:   778 ADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYA 837

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSIL 146
             ++  GV    +   +DK   E LS+IL
Sbjct:   838 IISLGVTDKQKNSKNDKFSAEELSAIL 864


>ASPGD|ASPL0000037473 [details] [associations]
            symbol:AN2973 species:162425 "Emericella nidulans"
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0070870 "heterochromatin maintenance involved in chromatin
            silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
            silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
            assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
            "chromatin silencing at telomere" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0031934 "mating-type region heterochromatin" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
            centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
            RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
            EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
            OMA:QQVGINW Uniprot:Q5B907
        Length = 1107

 Score = 316 (116.3 bits), Expect = 4.9e-27, P = 4.9e-27
 Identities = 66/144 (45%), Positives = 94/144 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGAD 61
             +DILE  L+   + + RLDG+T V +RQ+I+D F+ +T I   LLST+AGG G+NL  A+
Sbjct:   955 MDILEVVLENQHLKFVRLDGTTSVEDRQSIMDTFHENTDIPVFLLSTKAGGAGINLACAN 1014

Query:    62 TVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAVL 121
              V+I D  FNPQ D QAE+R HR+GQTR V + RLVTK T++E +Y + + KL LD AV 
Sbjct:  1015 KVIIFDSSFNPQEDVQAENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAVA 1074

Query:   122 -ESGVEVDNEGDTSDKTMGEILSS 144
              E G +     +   K + E+ ++
Sbjct:  1075 GEDGADSKKSEEAGIKAVEEMFTA 1098


>RGD|1310969 [details] [associations]
            symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
            "Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
            segregation" evidence=ISO] [GO:0000724 "double-strand break repair
            via homologous recombination" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
            evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
            [GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
            "chromatin remodeling" evidence=ISO] [GO:0010571 "positive
            regulation of DNA replication involved in S phase" evidence=ISO]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
            regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
            complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
            evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
            [GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0051225 "spindle assembly"
            evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
            [GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
            [GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
            evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
            IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
            Uniprot:D4A6Q6
        Length = 1553

 Score = 318 (117.0 bits), Expect = 5.0e-27, P = 5.0e-27
 Identities = 61/124 (49%), Positives = 86/124 (69%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D+LE  +     TY RLDGS++++ER+ +V  F     IF  LLSTRAGG G+NLT A
Sbjct:  1126 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAA 1185

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K  +   V
Sbjct:  1186 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1245

Query:   121 LESG 124
             +  G
Sbjct:  1246 ISGG 1249


>MGI|MGI:1915392 [details] [associations]
            symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
            "Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
            evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
            "DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
            "ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
            "response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
            cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
            [GO:0010571 "positive regulation of DNA replication involved in S
            phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
            unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
            evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
            assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
            [GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
            "cellular response to ionizing radiation" evidence=ISO] [GO:2000045
            "regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
            GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
            GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
            GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
            GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
            CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
            HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
            EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
            RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
            SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
            PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
            Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
            InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
            GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
        Length = 1559

 Score = 318 (117.0 bits), Expect = 5.0e-27, P = 5.0e-27
 Identities = 61/124 (49%), Positives = 86/124 (69%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D+LE  +     TY RLDGS++++ER+ +V  F     IF  LLSTRAGG G+NLT A
Sbjct:  1132 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAA 1191

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K  +   V
Sbjct:  1192 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1251

Query:   121 LESG 124
             +  G
Sbjct:  1252 ISGG 1255


>UNIPROTKB|E1BAN8 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
            cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
            radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
            binding" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
            "positive regulation of cell growth" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
            DNA replication involved in S phase" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
            GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
            GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
            GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
            GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
            RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
            GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
        Length = 1566

 Score = 318 (117.0 bits), Expect = 5.0e-27, P = 5.0e-27
 Identities = 61/124 (49%), Positives = 86/124 (69%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D+LE  +     TY RLDGS++++ER+ +V  F     IF  LLSTRAGG G+NLT A
Sbjct:  1139 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAA 1198

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K  +   V
Sbjct:  1199 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1258

Query:   121 LESG 124
             +  G
Sbjct:  1259 ISGG 1262


>UNIPROTKB|K7GNV1 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
            GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
            Uniprot:K7GNV1
        Length = 1061

 Score = 315 (115.9 bits), Expect = 5.8e-27, P = 5.8e-27
 Identities = 69/149 (46%), Positives = 96/149 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFN-NDTSIFACLLSTRAGGQGLNLTG 59
             +LDILE      G  Y RLDG T   ER+  ++AFN  ++S F  +LSTRAGG G+NL  
Sbjct:   517 LLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLAS 576

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + E A+ KL LD+ 
Sbjct:   577 ADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSI 636

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  +D + +   K   E+L  I  G
Sbjct:   637 VIQQGRLIDQQSNKMAKE--EMLQMIRHG 663


>POMBASE|SPAC1783.05 [details] [associations]
            symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
            species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
            region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
            DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=IMP] [GO:0006369 "termination of RNA polymerase II
            transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
            condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=IDA] [GO:0016592 "mediator complex"
            evidence=IPI] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
            silencing at centromere" evidence=IMP] [GO:0035067 "negative
            regulation of histone acetylation" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
            of transcription" evidence=TAS] [GO:0060303 "regulation of
            nucleosome density" evidence=IMP] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
            GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
            GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
            PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
            HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
            PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
            MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
            GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
            GO:GO:0060303 Uniprot:Q9US25
        Length = 1373

 Score = 316 (116.3 bits), Expect = 6.8e-27, P = 6.8e-27
 Identities = 68/147 (46%), Positives = 96/147 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             ML+IL   + + G  Y+RLDG+   + R+  +D FN  D+  F  LLSTRAGG G+NL  
Sbjct:   732 MLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNT 791

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NPQ D QA  R HRIGQ   V +YR ++K TV+E++ E A+RK+IL+ A
Sbjct:   792 ADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYA 851

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSIL 146
             ++  GV   ++   +DK   + LS+IL
Sbjct:   852 IISLGVTEKSKNSKNDKYDAQELSAIL 878


>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
            symbol:PF08_0048 "ATP-dependent helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
            PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
            RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
            KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
        Length = 2082

 Score = 317 (116.6 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 63/116 (54%), Positives = 86/116 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L+ +  ++ RLDGST+V +RQ IV  FNND SIF  + STR+G  G+NLT A
Sbjct:  1796 MLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAA 1855

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY--EIAKRKL 114
             + V+ +D D+NP ID+QA DRCHRIGQT+ V ++R V + TV+EN++  ++ KRKL
Sbjct:  1856 NVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKL 1911


>UNIPROTKB|C0H4W3 [details] [associations]
            symbol:PF08_0048 "Probable ATP-dependent helicase
            PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0016020
            "membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
            EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
            EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
        Length = 2082

 Score = 317 (116.6 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 63/116 (54%), Positives = 86/116 (74%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L+ +  ++ RLDGST+V +RQ IV  FNND SIF  + STR+G  G+NLT A
Sbjct:  1796 MLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAA 1855

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY--EIAKRKL 114
             + V+ +D D+NP ID+QA DRCHRIGQT+ V ++R V + TV+EN++  ++ KRKL
Sbjct:  1856 NVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKL 1911


>SGD|S000000017 [details] [associations]
            symbol:FUN30 "Snf2p family member with ATP-dependent
            chromatin remodeling activity" species:4932 "Saccharomyces
            cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
            "heterochromatin maintenance involved in chromatin silencing"
            evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000729 "DNA double-strand break
            processing" evidence=IMP] [GO:0031934 "mating-type region
            heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
            [GO:0000775 "chromosome, centromeric region" evidence=IDA]
            [GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
            silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
            at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
            involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
            repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
            GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
            GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
            GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
            PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
            DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
            PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
            KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
            OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
            GO:GO:0070870 Uniprot:P31380
        Length = 1131

 Score = 313 (115.2 bits), Expect = 1.1e-26, P = 1.1e-26
 Identities = 64/136 (47%), Positives = 87/136 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LDILE  L  +   + RLDGSTQV +RQ ++D F  D  I   +LST+AGG G+NL  A
Sbjct:   978 VLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCA 1037

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V+I D  FNP  DRQA DR HR+GQT+ V I  L+TK +++E ++++AK KL LD+ +
Sbjct:  1038 NNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI 1097

Query:   121 LESGVEVDN-EGDTSD 135
              E     D  E   SD
Sbjct:  1098 SEDKKSQDVLESKVSD 1113


>UNIPROTKB|F1P3Q4 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007420 "brain development" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
            complex" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0036310 "annealing helicase activity"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
            GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
            SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
            IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
        Length = 982

 Score = 312 (114.9 bits), Expect = 1.1e-26, P = 1.1e-26
 Identities = 69/149 (46%), Positives = 95/149 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +LDILE      G  Y RLDG T   ER+  +D FN  ++S F  +LSTRAGG G+NL  
Sbjct:   438 LLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLAT 497

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + E A+ KL LD+ 
Sbjct:   498 ADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSI 557

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  +D + +   K   E+L  I  G
Sbjct:   558 VIQQGRLIDQQSNKLAKD--EMLQMIRHG 584


>UNIPROTKB|I3LRQ2 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
            Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
        Length = 1051

 Score = 312 (114.9 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   821 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 880

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   881 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 940

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   941 VIQ---RMDTTGRT 951


>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
            symbol:hells "helicase, lymphoid-specific"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
            "chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
            GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
            EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
            UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
            GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
            ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
        Length = 853

 Score = 310 (114.2 bits), Expect = 1.3e-26, P = 1.3e-26
 Identities = 63/116 (54%), Positives = 80/116 (68%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LDIL     + G  Y RLDGS    +R   +  F++D  +F  LLSTRAGG G+NLT A
Sbjct:   643 ILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSA 702

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
             DTV+I D D+NPQ D QA+DRCHRIGQT+PV ++RL+T  T+DE + E   AKRKL
Sbjct:   703 DTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEKILERASAKRKL 758


>UNIPROTKB|J9NSS6 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
            Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
        Length = 1379

 Score = 312 (114.9 bits), Expect = 1.8e-26, P = 1.8e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   819 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 878

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   879 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 938

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   939 VIQ---RMDTTGRT 949


>ASPGD|ASPL0000056677 [details] [associations]
            symbol:AN1024 species:162425 "Emericella nidulans"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
            recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
            Uniprot:C8VTY9
        Length = 868

 Score = 308 (113.5 bits), Expect = 2.3e-26, P = 2.3e-26
 Identities = 63/124 (50%), Positives = 82/124 (66%)

Query:     2 LDILE-WTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             LDIL+ W   +      R+DG+    +RQA + AFN D      LLSTRAGGQG+NL  A
Sbjct:   655 LDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFNTDKDYKIFLLSTRAGGQGINLVAA 714

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV++ D D+NPQ D QA+DR HRIGQT+PV +YRL TKGTV++ + E A  K  L+  V
Sbjct:   715 DTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVYRLATKGTVEQTLLEKADSKRRLERLV 774

Query:   121 LESG 124
             ++ G
Sbjct:   775 IQKG 778


>UNIPROTKB|J9NX79 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
            Uniprot:J9NX79
        Length = 1689

 Score = 312 (114.9 bits), Expect = 2.4e-26, P = 2.4e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   788 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 847

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   848 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 907

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   908 VIQ---RMDTTGRT 918


>ZFIN|ZDB-GENE-070705-296 [details] [associations]
            symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
            species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
            EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
            UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
            GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
            Uniprot:A5WUY4
        Length = 1036

 Score = 309 (113.8 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 65/143 (45%), Positives = 93/143 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +LDILE      G  Y RLDG+T    R+  +DAFN  ++S F  +LSTRAGG G+NL  
Sbjct:   473 VLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINLAT 532

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + E A+ KL LD+ 
Sbjct:   533 ADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMKLRLDSI 592

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V++ G  +D +       M +++
Sbjct:   593 VIQQGRLIDQQNKLGKDEMLQMI 615


>UNIPROTKB|I3LQZ8 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
            Uniprot:I3LQZ8
        Length = 1709

 Score = 312 (114.9 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   808 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 867

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   868 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 927

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   928 VIQ---RMDTTGRT 938


>DICTYBASE|DDB_G0292948 [details] [associations]
            symbol:isw "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
            complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
            evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
            GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
            GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
            RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
            PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
            KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
            ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
        Length = 1221

 Score = 310 (114.2 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 67/149 (44%), Positives = 98/149 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
             MLDILE  +   G  Y R+DGST+   R+  ++ +N   S +FA LL+TRAGG G+ L  
Sbjct:   609 MLDILEDYMLYRGYKYARIDGSTESIVRENSIENYNKPGSDLFAFLLTTRAGGLGITLNT 668

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V++ D D+NPQ+D QA+DR HRIGQT+PVT+YR VT+ +++E + E A+ KL LDA 
Sbjct:   669 ADIVILFDSDWNPQMDLQAQDRAHRIGQTKPVTVYRFVTENSMEEKMVEKAEMKLQLDAL 728

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  V+   +   +   E+L+ +  G
Sbjct:   729 VIQQGRLVEANKNAKPE---ELLAMLRFG 754


>UNIPROTKB|E1C1A9 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
            EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
            Uniprot:E1C1A9
        Length = 1727

 Score = 312 (114.9 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   821 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 880

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   881 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 940

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   941 VIQ---RMDTTGRT 951


>WB|WBGene00010369 [details] [associations]
            symbol:chd-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
            RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
            STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
            KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
            InParanoid:O17909 NextBio:875487 Uniprot:O17909
        Length = 1461

 Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             MLDIL+  L +     +RLDGS +   R+  +D +N   S  FA LLSTRAGG G+NL  
Sbjct:   739 MLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLAT 798

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NPQ D QA  R HRIGQT+ V IYRLVTKG+V+E + E AKRKL+LD  
Sbjct:   799 ADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHL 858

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   859 VIQ---RMDTTGKT 869


>UNIPROTKB|F1N8K9 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0004386 GeneTree:ENSGT00560000076896
            EMBL:AADN02065411 EMBL:AADN02065412 EMBL:AADN02065413
            IPI:IPI00592819 Ensembl:ENSGALT00000023600 ArrayExpress:F1N8K9
            Uniprot:F1N8K9
        Length = 559

 Score = 303 (111.7 bits), Expect = 2.6e-26, P = 2.6e-26
 Identities = 77/154 (50%), Positives = 99/154 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:    64 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 123

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   124 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 183

Query:   120 VLE----SGVEVDNEGDT-SDKTM--GEILSSIL 146
             V++    +G  V + G T S  T    E LS+IL
Sbjct:   184 VIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAIL 217


>UNIPROTKB|G3MXX3 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
            Uniprot:G3MXX3
        Length = 1810

 Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   801 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 860

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   861 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 920

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   921 VIQ---RMDTTGRT 931


>UNIPROTKB|O14647 [details] [associations]
            symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=TAS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
            InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
            EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
            EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
            RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
            ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
            PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
            Ensembl:ENST00000394196 Ensembl:ENST00000420239
            Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
            UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
            MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
            OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
            NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
            Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
        Length = 1828

 Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   819 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 878

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   879 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 938

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   939 VIQ---RMDTTGRT 949


>UNIPROTKB|E2R5Z7 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
            NextBio:20854276 Uniprot:E2R5Z7
        Length = 1831

 Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   822 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 881

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   882 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 941

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   942 VIQ---RMDTTGRT 952


>UNIPROTKB|F1SA77 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
            Uniprot:F1SA77
        Length = 1831

 Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   821 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 880

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   881 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 940

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   941 VIQ---RMDTTGRT 951


>UNIPROTKB|D4AD08 [details] [associations]
            symbol:Chd2 "Chromodomain helicase DNA binding protein 2
            (Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
            IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
            Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
            RGD:1310056 NextBio:659434 Uniprot:D4AD08
        Length = 1834

 Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   826 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 885

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   886 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 945

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   946 VIQ---RMDTTGRT 956


>UNIPROTKB|J9PA90 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
            Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
        Length = 1840

 Score = 312 (114.9 bits), Expect = 2.7e-26, P = 2.7e-26
 Identities = 71/134 (52%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  
Sbjct:   832 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 891

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD  
Sbjct:   892 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 951

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   952 VIQ---RMDTTGRT 962


>ZFIN|ZDB-GENE-050522-499 [details] [associations]
            symbol:smarcad1 "SWI/SNF-related, matrix-associated
            actin-dependent regulator of chromatin, subfamily a, containing
            DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
            processing" evidence=ISS] [GO:0035861 "site of double-strand break"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
            GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
            HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
            ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
            ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
        Length = 972

 Score = 308 (113.5 bits), Expect = 2.8e-26, P = 2.8e-26
 Identities = 58/117 (49%), Positives = 84/117 (71%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDI+E  L  +   Y RLDGST + ER  ++D +N +  IF  LLSTRAGGQG+NL  A
Sbjct:   829 MLDIVEILLKHLDHQYVRLDGSTPMAERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASA 888

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
             +TV++HD+D NP  D+QAEDRCHR+GQTR V + +L++K ++++ +  + + KL L+
Sbjct:   889 NTVILHDIDCNPFNDKQAEDRCHRMGQTRTVQVIKLISKDSIEDCMLRVGQEKLKLE 945


>FB|FBgn0011604 [details] [associations]
            symbol:Iswi "Imitation SWI" species:7227 "Drosophila
            melanogaster" [GO:0006338 "chromatin remodeling"
            evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
            evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
            ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
            evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
            [GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
            complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
            evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
            disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
            mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
            evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
            [GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0006351 "transcription,
            DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
            complex" evidence=IPI] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=TAS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IPI]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
            receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
            "muscle organ development" evidence=IMP] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
            rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
            evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
            [GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
            [GO:0035063 "nuclear speck organization" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
            GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
            GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
            GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
            ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
            SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
            RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
            UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
            SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
            STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
            EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
            KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
            InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
            EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
            Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
            GO:GO:0035063 Uniprot:Q24368
        Length = 1027

 Score = 306 (112.8 bits), Expect = 5.1e-26, P = 5.1e-26
 Identities = 70/149 (46%), Positives = 92/149 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             MLDILE         Y RLDG T   +R   +  FN D S  F  +LSTRAGG G+NL  
Sbjct:   459 MLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLAT 518

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+I+D D+NPQ+D QA DR HRIGQ + V ++RL+T+ TV+E + E A+ KL LD  
Sbjct:   519 ADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKM 578

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VDN  +  +K   E+L+ I  G
Sbjct:   579 VIQGGRLVDNRSNQLNKD--EMLNIIRFG 605


>TAIR|locus:2150270 [details] [associations]
            symbol:CHR23 "chromatin remodeling 23" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
            binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
            "sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
            evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
            [GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
            "protein ubiquitination" evidence=RCA] [GO:0016571 "histone
            methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
            evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
            evidence=RCA] [GO:0033044 "regulation of chromosome organization"
            evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
            evidence=RCA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
            OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
            ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
            EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
            PhylomeDB:F4K128 Uniprot:F4K128
        Length = 1064

 Score = 305 (112.4 bits), Expect = 6.9e-26, P = 6.9e-26
 Identities = 64/145 (44%), Positives = 97/145 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             ++D+LE  L +    Y RLDGST+  +R  ++  FN  D+  F  LLSTRAGG GLNL  
Sbjct:   723 LIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQT 782

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADT++I D D+NPQ+D+QAEDR HRIGQ + V ++ LV+ G+++E + E AK+K+ +DA 
Sbjct:   783 ADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAK 842

Query:   120 VLESGV-EVDNEGDTSDKTMGEILS 143
             V+++G+    +      + + EI+S
Sbjct:   843 VIQAGLFNTTSTAQDRREMLEEIMS 867


>ZFIN|ZDB-GENE-050419-256 [details] [associations]
            symbol:chd2 "chromodomain helicase DNA binding
            protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
            Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
            Uniprot:E7F7R2
        Length = 1813

 Score = 307 (113.1 bits), Expect = 9.1e-26, P = 9.1e-26
 Identities = 70/134 (52%), Positives = 90/134 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L +    ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   824 MLDILADYLSMKRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 883

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E++ E AK+K++LD  
Sbjct:   884 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHL 943

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   944 VIQ---RMDTTGRT 954


>WB|WBGene00000482 [details] [associations]
            symbol:chd-3 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
            acting on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
            [GO:0040027 "negative regulation of vulval development"
            evidence=IMP] [GO:0046580 "negative regulation of Ras protein
            signal transduction" evidence=IMP] [GO:0001709 "cell fate
            determination" evidence=IMP] [GO:0000118 "histone deacetylase
            complex" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
            PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
            EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
            UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
            STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
            KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
            HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            Uniprot:Q22516
        Length = 1787

 Score = 306 (112.8 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 67/144 (46%), Positives = 91/144 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLDILE   DV G  Y R+DGS    +RQ  +D +N      F  LLSTRAGG G+NL  
Sbjct:   968 MLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLAT 1027

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HR+GQ   V IYR VTKG+V+E +  +AK+K++L   
Sbjct:  1028 ADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHL 1087

Query:   120 VLESGVEVDNEGDTSDKT-MGEIL 142
             V+ +G+    +G +  KT + ++L
Sbjct:  1088 VVRAGLGA-KDGKSMSKTELDDVL 1110


>UNIPROTKB|Q22516 [details] [associations]
            symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
            homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
            duplex unwinding" evidence=ISS] InterPro:IPR001841
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
            InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
            SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
            GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
            GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
            PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
            ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
            EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
            UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
            InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
        Length = 1787

 Score = 306 (112.8 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 67/144 (46%), Positives = 91/144 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLDILE   DV G  Y R+DGS    +RQ  +D +N      F  LLSTRAGG G+NL  
Sbjct:   968 MLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLAT 1027

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HR+GQ   V IYR VTKG+V+E +  +AK+K++L   
Sbjct:  1028 ADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHL 1087

Query:   120 VLESGVEVDNEGDTSDKT-MGEIL 142
             V+ +G+    +G +  KT + ++L
Sbjct:  1088 VVRAGLGA-KDGKSMSKTELDDVL 1110


>UNIPROTKB|E2QVR5 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
            Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
        Length = 1073

 Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 69/151 (45%), Positives = 96/151 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQA--IVDAFNN-DTSIFACLLSTRAGGQGLNL 57
             +LDILE      G  Y RLDG T   ER+    ++AFN  ++S F  +LSTRAGG G+NL
Sbjct:   527 LLDILEDYCMWRGYEYCRLDGQTPHEEREKKEAIEAFNAPNSSKFIFMLSTRAGGLGINL 586

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
               AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + E A+ KL LD
Sbjct:   587 ASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLD 646

Query:   118 AAVLESGVEVDNEGDTSDKTMGEILSSILMG 148
             + V++ G  +D + +   K   E+L  I  G
Sbjct:   647 SIVIQQGRLIDQQSNKLAKE--EMLQMIRHG 675


>ZFIN|ZDB-GENE-021025-1 [details] [associations]
            symbol:btaf1 "BTAF1 RNA polymerase II, B-TFIID
            transcription factor-associated" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000357 InterPro:IPR001650 InterPro:IPR016024
            Pfam:PF00176 Pfam:PF00271 Pfam:PF02985 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-021025-1 GO:GO:0005524 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR022707
            Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:BX530089
            EMBL:CR792417 IPI:IPI00929996 Ensembl:ENSDART00000084327
            ArrayExpress:F1Q603 Bgee:F1Q603 Uniprot:F1Q603
        Length = 1861

 Score = 306 (112.8 bits), Expect = 1.2e-25, P = 1.2e-25
 Identities = 67/135 (49%), Positives = 86/135 (63%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    + GVTY RLDGS Q   R +IV  FNND SI   LL+T  GG GLNL
Sbjct:  1666 MLDIVEQDLLKPQLPGVTYLRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 1725

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ R V +YRL+T+GT++E +  + K K+ I 
Sbjct:  1726 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMTIA 1785

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:  1786 NTVISQENASLQSMG 1800


>DICTYBASE|DDB_G0293012 [details] [associations]
            symbol:DDB_G0293012 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
            SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
            RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
            EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
            InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
        Length = 3071

 Score = 308 (113.5 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 67/137 (48%), Positives = 87/137 (63%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTGA 60
             L+ILE  L     TY RLDGS +   RQA +D F +   + F  LLSTRAGG G+NLT A
Sbjct:  1239 LNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGINLTTA 1298

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV++ D D+NPQ D QA+ RCHRIGQT  V +YRL+T+ T +E ++E A +KL+LD  V
Sbjct:  1299 DTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLLDHIV 1358

Query:   121 LESGVEVDNEGDTSDKT 137
             L +  +      T   T
Sbjct:  1359 LSTNKDKKQTNTTPIST 1375


>UNIPROTKB|F1NS62 [details] [associations]
            symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
            EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
            Ensembl:ENSGALT00000024254 Uniprot:F1NS62
        Length = 895

 Score = 301 (111.0 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 70/145 (48%), Positives = 88/145 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LDIL+  +D  G +Y RLDGS +  ER   +  F     IF  LLSTRAGG G+NLT A
Sbjct:   375 LLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAA 433

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQ +PV I RL+ + TV+E +Y  A  KL L  A+
Sbjct:   434 DTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGRDTVEEIIYRRAASKLRLTNAI 493

Query:   121 LESG---VEVDNEGDTSDKTMGEIL 142
             +E G   + V    + SD  + EIL
Sbjct:   494 VEGGQFALGVHKPQEASDLQLSEIL 518


>DICTYBASE|DDB_G0280705 [details] [associations]
            symbol:DDB_G0280705 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
            dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
            GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
            EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
            InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
            Uniprot:Q54UZ8
        Length = 2373

 Score = 306 (112.8 bits), Expect = 1.6e-25, P = 1.6e-25
 Identities = 67/140 (47%), Positives = 91/140 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +LDIL+  L   G  + R+DGS +  +RQA +D F+  D+  F  LL TRAGG G+NLT 
Sbjct:   861 VLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTA 920

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NPQ D QA+ RCHRIGQ + V +YRLVTK T +  +++ A +KL LD A
Sbjct:   921 ADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTKNTYERLMFDKASKKLGLDRA 980

Query:   120 VLE--SGVEVDNEGDTSDKT 137
             VL   + +   N G+ S  +
Sbjct:   981 VLTKMNSLADSNNGNNSSSS 1000


>UNIPROTKB|F5H493 [details] [associations]
            symbol:ERCC6 "DNA excision repair protein ERCC-6"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000303 "response to superoxide"
            evidence=IEA] [GO:0006283 "transcription-coupled
            nucleotide-excision repair" evidence=IEA] [GO:0006290 "pyrimidine
            dimer repair" evidence=IEA] [GO:0007256 "activation of JNKK
            activity" evidence=IEA] [GO:0007257 "activation of JUN kinase
            activity" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
            pathway in response to DNA damage" evidence=IEA] [GO:0009636
            "response to toxic substance" evidence=IEA] [GO:0010165 "response
            to X-ray" evidence=IEA] [GO:0010224 "response to UV-B"
            evidence=IEA] [GO:0010332 "response to gamma radiation"
            evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0008630 GO:GO:0003677 GO:GO:0009636 GO:GO:0045494
            GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
            PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
            EMBL:AC073366 GO:GO:0006290 GO:GO:0007256 EMBL:AL138760
            HGNC:HGNC:3438 ChiTaRS:ERCC6 GO:GO:0000303 IPI:IPI01012579
            ProteinModelPortal:F5H493 SMR:F5H493 Ensembl:ENST00000542458
            UCSC:uc009xod.3 ArrayExpress:F5H493 Bgee:F5H493 Uniprot:F5H493
        Length = 863

 Score = 300 (110.7 bits), Expect = 1.6e-25, P = 1.6e-25
 Identities = 61/122 (50%), Positives = 81/122 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L     TY ++DG+T +  RQ ++  +N DTSIF  LL+TR GG G+NLTGA
Sbjct:   237 MLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGA 296

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + VVI+D D+NP  D QA +R  RIGQ + VT+YRL+T GT++E +Y     K  L   V
Sbjct:   297 NRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRV 356

Query:   121 LE 122
             L+
Sbjct:   357 LK 358


>UNIPROTKB|E1C0M8 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
            "chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
            chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
            silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
            [GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
            [GO:0009790 "embryo development" evidence=IEA] [GO:0016584
            "nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
            binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
            GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
            OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
            IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
            Uniprot:E1C0M8
        Length = 1038

 Score = 301 (111.0 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 69/149 (46%), Positives = 93/149 (62%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             +LDILE         Y RLDG T   ERQA ++A+N   +S F  +LSTRAGG G+NL  
Sbjct:   496 VLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINLAT 555

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQT+ V ++R +T  TV+E + E A+ KL LD+ 
Sbjct:   556 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 615

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VD   +   K   E+L  I  G
Sbjct:   616 VIQQGRLVDQNLNKLGKD--EMLQMIRHG 642


>UNIPROTKB|B6ZLK2 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0000775
            "chromosome, centromeric region" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
            UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
            InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
        Length = 1719

 Score = 303 (111.7 bits), Expect = 2.3e-25, P = 2.3e-25
 Identities = 77/154 (50%), Positives = 99/154 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   812 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 871

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   872 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 931

Query:   120 VLE----SGVEVDNEGDT-SDKTM--GEILSSIL 146
             V++    +G  V + G T S  T    E LS+IL
Sbjct:   932 VIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAIL 965


>POMBASE|SPAC25A8.01c [details] [associations]
            symbol:fft3 "fun thirty related protein Fft3"
            species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
            chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
            remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
            protein signal transduction" evidence=IGI] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
            GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
            PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
            STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
            KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
            NextBio:20802628 GO:GO:0032017 Uniprot:O42861
        Length = 922

 Score = 299 (110.3 bits), Expect = 2.4e-25, P = 2.4e-25
 Identities = 59/132 (44%), Positives = 87/132 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +LDIL+  +  + + + R DGSTQV  RQ ++D F  D SI   LLST+AGG G+NL  A
Sbjct:   789 VLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKAGGFGINLACA 848

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V+++D+ FNP  D QAEDR HR+GQ + VT+Y+ V K T++E++  +A  K+ LDA +
Sbjct:   849 NMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIALDATL 908

Query:   121 LESGVEVDNEGD 132
               +   V+ E D
Sbjct:   909 SGNAETVEAEDD 920


>UNIPROTKB|F1NP27 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
            EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
            ArrayExpress:F1NP27 Uniprot:F1NP27
        Length = 1803

 Score = 303 (111.7 bits), Expect = 2.4e-25, P = 2.4e-25
 Identities = 77/154 (50%), Positives = 99/154 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   808 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 867

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   868 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 927

Query:   120 VLE----SGVEVDNEGDT-SDKTM--GEILSSIL 146
             V++    +G  V + G T S  T    E LS+IL
Sbjct:   928 VIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAIL 961


>UNIPROTKB|F1N8K8 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
            EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
            Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
        Length = 1804

 Score = 303 (111.7 bits), Expect = 2.4e-25, P = 2.4e-25
 Identities = 77/154 (50%), Positives = 99/154 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   808 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 867

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   868 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 927

Query:   120 VLE----SGVEVDNEGDT-SDKTM--GEILSSIL 146
             V++    +G  V + G T S  T    E LS+IL
Sbjct:   928 VIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAIL 961


>ASPGD|ASPL0000047400 [details] [associations]
            symbol:AN2285 species:162425 "Emericella nidulans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
            mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
            silencing at telomere" evidence=IEA] [GO:0006366 "transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0016584
            "nucleosome positioning" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0043618 "regulation of transcription from RNA
            polymerase II promoter in response to stress" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
            GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
            STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
            KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
            OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
        Length = 1612

 Score = 302 (111.4 bits), Expect = 2.6e-25, P = 2.6e-25
 Identities = 65/140 (46%), Positives = 88/140 (62%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D++E  L      Y RLDGST++ +R+  V  F     IF  LLSTRAGG G+NLT A
Sbjct:  1349 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAA 1408

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+T+ T++E + + A +K  +   V
Sbjct:  1409 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVV 1468

Query:   121 LESGVE--VD-NEGDTSDKT 137
             +  G    VD N  +   KT
Sbjct:  1469 ISGGAAGGVDFNTRNRDSKT 1488


>UNIPROTKB|O14646 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
            binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=TAS] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
            binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
            GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
            KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
            IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
            PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
            PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
            ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
            PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
            Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
            GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
            HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
            HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
            OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
            EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
            ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
            Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
        Length = 1710

 Score = 302 (111.4 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 69/134 (51%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   816 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 875

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   876 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 935

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   936 VIQ---RMDTTGKT 946


>UNIPROTKB|E2QUI5 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 CTD:1105
            GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
            RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
            KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
        Length = 1711

 Score = 302 (111.4 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 69/134 (51%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   815 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 874

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   875 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 934

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   935 VIQ---RMDTTGKT 945


>MGI|MGI:88393 [details] [associations]
            symbol:Chd1 "chromodomain helicase DNA binding protein 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=NAS] [GO:0004386 "helicase activity"
            evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
            [GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
            residue binding" evidence=ISO] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
            InterPro:IPR025260 Pfam:PF13907 CTD:1105
            GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
            OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
            EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
            UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
            STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
            Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
            InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
            Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
        Length = 1711

 Score = 302 (111.4 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 69/134 (51%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   814 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 873

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   874 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 933

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   934 VIQ---RMDTTGKT 944


>UNIPROTKB|J9P6Y8 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
            Uniprot:J9P6Y8
        Length = 1782

 Score = 302 (111.4 bits), Expect = 3.0e-25, P = 3.0e-25
 Identities = 69/134 (51%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   798 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 857

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   858 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 917

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   918 VIQ---RMDTTGKT 928


>UNIPROTKB|F1MGF2 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0035064 "methylated histone residue binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
            EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
            Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
        Length = 1810

 Score = 302 (111.4 bits), Expect = 3.1e-25, P = 3.1e-25
 Identities = 69/134 (51%), Positives = 89/134 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   828 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 887

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   888 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 947

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   948 VIQ---RMDTTGKT 958


>RGD|2323132 [details] [associations]
            symbol:LOC100359912 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin a5-like" species:10116
            "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
            GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
            Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
        Length = 760

 Score = 296 (109.3 bits), Expect = 3.4e-25, P = 3.4e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LDILE         Y RLDG T   ERQ  ++A+N   S  F  +LSTRAGG G+NL  
Sbjct:   232 VLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLAT 291

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQT+ V ++R +T  TV+E + E A+ KL LD+ 
Sbjct:   292 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 351

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VD   +   K   E+L  I  G
Sbjct:   352 VIQQGRLVDQNLNKIGKD--EMLQMIRHG 378


>ASPGD|ASPL0000068126 [details] [associations]
            symbol:cshA species:162425 "Emericella nidulans"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IEA] [GO:0006283 "transcription-coupled
            nucleotide-excision repair" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 EMBL:BN001304
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AACD01000119 HOGENOM:HOG000170952 KO:K10841
            OrthoDB:EOG44TSGZ RefSeq:XP_664707.1 ProteinModelPortal:Q5AX77
            STRING:Q5AX77 EnsemblFungi:CADANIAT00000362 GeneID:2869817
            KEGG:ani:AN7103.2 OMA:HSALEHD Uniprot:Q5AX77
        Length = 1193

 Score = 299 (110.3 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 60/123 (48%), Positives = 81/123 (65%)

Query:     1 MLDILE-WTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTG 59
             MLDILE +   + G  YRR+DG+T +  RQ +VD FN D  +   LL+T+ GG G+NLTG
Sbjct:   764 MLDILEKFVKSLSGFNYRRMDGTTPIQHRQTMVDEFNKDPDLHVFLLTTKVGGLGVNLTG 823

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+I+D D+NP  D QA +R  R+GQ R VTIYRL+T GT++E +Y     K  L   
Sbjct:   824 ADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNK 883

Query:   120 VLE 122
             +L+
Sbjct:   884 ILK 886


>UNIPROTKB|Q03468 [details] [associations]
            symbol:ERCC6 "DNA excision repair protein ERCC-6"
            species:9606 "Homo sapiens" [GO:0000303 "response to superoxide"
            evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
            [GO:0007256 "activation of JNKK activity" evidence=IEA] [GO:0007257
            "activation of JUN kinase activity" evidence=IEA] [GO:0008630
            "intrinsic apoptotic signaling pathway in response to DNA damage"
            evidence=IEA] [GO:0009636 "response to toxic substance"
            evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
            [GO:0010224 "response to UV-B" evidence=IEA] [GO:0010332 "response
            to gamma radiation" evidence=IEA] [GO:0045494 "photoreceptor cell
            maintenance" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=NAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
            "DNA helicase activity" evidence=IDA] [GO:0008094 "DNA-dependent
            ATPase activity" evidence=IDA] [GO:0047485 "protein N-terminus
            binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
            evidence=IPI] [GO:0032784 "regulation of DNA-dependent
            transcription, elongation" evidence=IDA] [GO:0008023 "transcription
            elongation factor complex" evidence=IDA] [GO:0032786 "positive
            regulation of DNA-dependent transcription, elongation"
            evidence=IDA] [GO:0006283 "transcription-coupled
            nucleotide-excision repair" evidence=IMP;TAS] [GO:0032403 "protein
            complex binding" evidence=IDA] [GO:0009411 "response to UV"
            evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005654
            "nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006979
            "response to oxidative stress" evidence=IDA] [GO:0006284
            "base-excision repair" evidence=IMP] [GO:0003682 "chromatin
            binding" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
            [GO:0006289 "nucleotide-excision repair" evidence=TAS]
            Reactome:REACT_216 InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0009411 GO:GO:0008630 GO:GO:0006979
            GO:GO:0005730 GO:GO:0032403 GO:GO:0006284 GO:GO:0003677
            GO:GO:0009636 GO:GO:0003682 Orphanet:279 GO:GO:0045494
            GO:GO:0010332 GO:GO:0006366 GO:GO:0004386 GO:GO:0010165
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
            GO:GO:0008023 EMBL:CH471187 GO:GO:0032786 GO:GO:0006290
            GO:GO:0007256 Orphanet:1466 EMBL:L04791 EMBL:AY204752 EMBL:AL138760
            IPI:IPI00414779 PIR:A44224 RefSeq:NP_000115.1 UniGene:Hs.654449
            ProteinModelPortal:Q03468 SMR:Q03468 DIP:DIP-193N IntAct:Q03468
            MINT:MINT-1193928 STRING:Q03468 PhosphoSite:Q03468 DMDM:416959
            PaxDb:Q03468 PRIDE:Q03468 Ensembl:ENST00000355832 GeneID:2074
            KEGG:hsa:2074 UCSC:uc001jhr.4 CTD:2074 GeneCards:GC10M050663
            HGNC:HGNC:3438 MIM:133540 MIM:214150 MIM:278800 MIM:600630
            MIM:609413 MIM:613761 neXtProt:NX_Q03468 Orphanet:90321
            Orphanet:90322 Orphanet:90324 Orphanet:1569 Orphanet:178338
            PharmGKB:PA27852 HOGENOM:HOG000170952 HOVERGEN:HBG051502
            InParanoid:Q03468 KO:K10841 OMA:NGEMQIF OrthoDB:EOG476JZF
            PhylomeDB:Q03468 ChiTaRS:ERCC6 GenomeRNAi:2074 NextBio:8437
            ArrayExpress:Q03468 Bgee:Q03468 CleanEx:HS_ERCC6
            Genevestigator:Q03468 GermOnline:ENSG00000032514 GO:GO:0000303
            Uniprot:Q03468
        Length = 1493

 Score = 300 (110.7 bits), Expect = 3.9e-25, P = 3.9e-25
 Identities = 61/122 (50%), Positives = 81/122 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L     TY ++DG+T +  RQ ++  +N DTSIF  LL+TR GG G+NLTGA
Sbjct:   867 MLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGA 926

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + VVI+D D+NP  D QA +R  RIGQ + VT+YRL+T GT++E +Y     K  L   V
Sbjct:   927 NRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRV 986

Query:   121 LE 122
             L+
Sbjct:   987 LK 988


>SGD|S000001388 [details] [associations]
            symbol:STH1 "ATPase component of the RSC chromatin remodeling
            complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
            "nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
            acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
            disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
            evidence=IMP] [GO:0007010 "cytoskeleton organization"
            evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
            evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
            [GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
            [GO:0006368 "transcription elongation from RNA polymerase II
            promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
            evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
            GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
            EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
            GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
            EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
            PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
            GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
            EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
            SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
            STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
            GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
            NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
            Uniprot:P32597
        Length = 1359

 Score = 299 (110.3 bits), Expect = 4.4e-25, P = 4.4e-25
 Identities = 65/137 (47%), Positives = 91/137 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             ++DI+E  L +  + Y RLDGST+  ER  +++AFN  D+  F  LLSTRAGG GLNL  
Sbjct:   819 VMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQT 878

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA+DR HRIGQ   V I RL+T  +V+E + E A +KL +D  
Sbjct:   879 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGK 938

Query:   120 VLESGVEVDNEGDTSDK 136
             V+++G + DN+    ++
Sbjct:   939 VIQAG-KFDNKSTAEEQ 954


>WB|WBGene00007053 [details] [associations]
            symbol:chd-7 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
            anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
            EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
            EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
            UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
            InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
        Length = 2967

 Score = 303 (111.7 bits), Expect = 4.4e-25, P = 4.4e-25
 Identities = 67/144 (46%), Positives = 92/144 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LD+LE  L  +   + R+DG+ +   RQA +D F+ + S  F  LL TRAGG G+NLT 
Sbjct:  1549 VLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTA 1608

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NPQ D QA+ RCHRIGQ + V +YRL+T  T +  +++ A  KL LD A
Sbjct:  1609 ADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKA 1668

Query:   120 VLESGVEVDNEGDT-SDKTMGEIL 142
             VL+S   +  EG   S K + E+L
Sbjct:  1669 VLQSTTALKAEGTALSKKDVEELL 1692


>FB|FBgn0086613 [details] [associations]
            symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
            binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
            evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
            GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
            GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
            EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
            ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
            PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
            KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
            GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
            OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
            NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
        Length = 1638

 Score = 300 (110.7 bits), Expect = 4.4e-25, P = 4.4e-25
 Identities = 58/124 (46%), Positives = 84/124 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D+LE  +      Y RLDGS++++ R+ +V  F     IF  LLSTRAGG G+NLT A
Sbjct:  1184 MIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAA 1243

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + A+ K  +   V
Sbjct:  1244 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMV 1303

Query:   121 LESG 124
             +  G
Sbjct:  1304 ISGG 1307


>ZFIN|ZDB-GENE-021125-1 [details] [associations]
            symbol:smarca5 "SWI/SNF related, matrix associated,
            actin dependent regulator of chromatin, subfamily a, member 5"
            species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
            GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
            IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
            ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
        Length = 1035

 Score = 297 (109.6 bits), Expect = 4.7e-25, P = 4.7e-25
 Identities = 70/149 (46%), Positives = 93/149 (62%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +LDILE         Y RLDG T   ERQ  ++AFN  ++S F  +LSTRAGG G+NL  
Sbjct:   494 VLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINLAT 553

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+I+D D+NPQ+D QA DR HRIGQ + V ++R +T  TV+E + E A+ KL LD+ 
Sbjct:   554 ADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSI 613

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VD   +   K   E+LS I  G
Sbjct:   614 VIQQGRLVDPSMNKLGKD--EMLSIIRHG 640


>TAIR|locus:2041644 [details] [associations]
            symbol:CHR5 "chromatin remodeling 5" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
            activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
            IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
            EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
            OMA:ARNTKSY Uniprot:F4IV99
        Length = 1724

 Score = 300 (110.7 bits), Expect = 4.7e-25, P = 4.7e-25
 Identities = 67/123 (54%), Positives = 81/123 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L + G  ++RLDGST+   RQ  +D FN   S   C LLSTRAGG G+NL  
Sbjct:   967 MLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLAT 1026

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA  R HRIGQ   V IYR VT  +V+E + E AKRK++LD  
Sbjct:  1027 ADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHL 1086

Query:   120 VLE 122
             V++
Sbjct:  1087 VIQ 1089


>UNIPROTKB|F1N052 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
            complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0009790 "embryo development"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
            [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
            GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
            GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
            Ensembl:ENSBTAT00000004408 Uniprot:F1N052
        Length = 1052

 Score = 297 (109.6 bits), Expect = 4.8e-25, P = 4.8e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LDILE         Y RLDG T   ERQ  ++A+N   S  F  +LSTRAGG G+NL  
Sbjct:   511 VLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLAT 570

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQT+ V ++R +T  TV+E + E A+ KL LD+ 
Sbjct:   571 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 630

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VD   +   K   E+L  I  G
Sbjct:   631 VIQQGRLVDQNLNKIGKD--EMLQMIRHG 657


>UNIPROTKB|E2QWV0 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
            evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
            [GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
            [GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
            "embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
            transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
            assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
            "chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
            "chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
            GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
            GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
            SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
            EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
            Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
            NextBio:20851293 Uniprot:E2QWV0
        Length = 1052

 Score = 297 (109.6 bits), Expect = 4.8e-25, P = 4.8e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LDILE         Y RLDG T   ERQ  ++A+N   S  F  +LSTRAGG G+NL  
Sbjct:   511 VLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLAT 570

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQT+ V ++R +T  TV+E + E A+ KL LD+ 
Sbjct:   571 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 630

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VD   +   K   E+L  I  G
Sbjct:   631 VIQQGRLVDQNLNKIGKD--EMLQMIRHG 657


>UNIPROTKB|F1RRG9 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
            complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0009790 "embryo development"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
            [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
            GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
            GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
            GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
            UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
            KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
        Length = 1052

 Score = 297 (109.6 bits), Expect = 4.8e-25, P = 4.8e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LDILE         Y RLDG T   ERQ  ++A+N   S  F  +LSTRAGG G+NL  
Sbjct:   511 VLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLAT 570

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQT+ V ++R +T  TV+E + E A+ KL LD+ 
Sbjct:   571 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 630

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VD   +   K   E+L  I  G
Sbjct:   631 VIQQGRLVDQNLNKIGKD--EMLQMIRHG 657


>SGD|S000003118 [details] [associations]
            symbol:INO80 "ATPase and nucleosome spacing factor"
            species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0043486 "histone exchange"
            evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043618 "regulation of transcription from RNA polymerase II
            promoter in response to stress" evidence=IMP] [GO:0016584
            "nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
            evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
            GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
            GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
            GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
            GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
            EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
            SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
            STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
            GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
            NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
            Uniprot:P53115
        Length = 1489

 Score = 299 (110.3 bits), Expect = 5.0e-25, P = 5.0e-25
 Identities = 59/129 (45%), Positives = 87/129 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D++E  L      + RLDGS+++ +R+ +V  +  +  IF  LLSTRAGG G+NLT A
Sbjct:  1327 MMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAA 1386

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+ +GT++E + + AK+K  +   V
Sbjct:  1387 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVV 1446

Query:   121 LESGVEVDN 129
             +E   +  N
Sbjct:  1447 MEGKTQEKN 1455


>UNIPROTKB|B4E0W6 [details] [associations]
            symbol:BTAF1 "TATA-binding protein-associated factor 172"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 UniGene:Hs.500526 HGNC:HGNC:17307
            EMBL:AL365398 EMBL:AL359198 EMBL:AK303554 IPI:IPI01015564
            SMR:B4E0W6 STRING:B4E0W6 Ensembl:ENST00000544642 HOVERGEN:HBG104002
            Uniprot:B4E0W6
        Length = 677

 Score = 293 (108.2 bits), Expect = 5.5e-25, P = 5.5e-25
 Identities = 65/135 (48%), Positives = 85/135 (62%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS    +R +IV  FNND SI   LL+T  GG GLNL
Sbjct:   484 MLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 543

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ R V +YRL+T+GT++E +  + K K+ I 
Sbjct:   544 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIA 603

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:   604 NTVISQENSSLQSMG 618


>UNIPROTKB|F1N166 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
            activity" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
            GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
            OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
            Ensembl:ENSBTAT00000002973 Uniprot:F1N166
        Length = 1078

 Score = 267 (99.0 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
 Identities = 55/118 (46%), Positives = 80/118 (67%)

Query:    32 VDAFN-NDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRP 90
             ++AFN  ++S F  +LSTRAGG G+NL  AD V+++D D+NPQ+D QA DR HRIGQ +P
Sbjct:   565 IEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKP 624

Query:    91 VTIYRLVTKGTVDENVYEIAKRKLILDAAVLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V ++RL+T  TV+E + E A+ KL LD+ V++ G  +D + +   K   E+L  I  G
Sbjct:   625 VRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKE--EMLQMIRHG 680

 Score = 57 (25.1 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAF 35
             +LDILE      G  Y RLDG T   ER+ I+  F
Sbjct:   517 LLDILEDYCMWRGYEYCRLDGQTPHEEREEILKDF 551


>MGI|MGI:1935129 [details] [associations]
            symbol:Smarca5 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 5"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=ISO] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
            "ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
            break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
            disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
            evidence=ISO] [GO:0006338 "chromatin remodeling"
            evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
            initiation" evidence=ISO] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
            "NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
            anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
            MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
            GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
            GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
            GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
            GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
            HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
            EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
            EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
            ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
            MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
            PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
            UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
            Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
        Length = 1051

 Score = 296 (109.3 bits), Expect = 6.2e-25, P = 6.2e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LDILE         Y RLDG T   ERQ  ++A+N   S  F  +LSTRAGG G+NL  
Sbjct:   510 VLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLAT 569

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQT+ V ++R +T  TV+E + E A+ KL LD+ 
Sbjct:   570 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 629

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VD   +   K   E+L  I  G
Sbjct:   630 VIQQGRLVDQNLNKIGKD--EMLQMIRHG 656


>RGD|1308832 [details] [associations]
            symbol:Smarca5 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 5"
            species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
            at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006302 "double-strand break repair"
            evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
            evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
            "DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
            "embryo development" evidence=ISO] [GO:0016584 "nucleosome
            positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
            complex" evidence=ISO] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
            replication fork" evidence=ISO] [GO:0042393 "histone binding"
            evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
            IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
            UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
        Length = 1051

 Score = 296 (109.3 bits), Expect = 6.2e-25, P = 6.2e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LDILE         Y RLDG T   ERQ  ++A+N   S  F  +LSTRAGG G+NL  
Sbjct:   510 VLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLAT 569

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQT+ V ++R +T  TV+E + E A+ KL LD+ 
Sbjct:   570 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 629

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VD   +   K   E+L  I  G
Sbjct:   630 VIQQGRLVDQNLNKIGKD--EMLQMIRHG 656


>UNIPROTKB|O60264 [details] [associations]
            symbol:SMARCA5 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member 5"
            species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
            "chromatin silencing complex" evidence=IEA] [GO:0006302
            "double-strand break repair" evidence=IEA] [GO:0009790 "embryo
            development" evidence=IEA] [GO:0006334 "nucleosome assembly"
            evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
            [GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
            complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
            chromosome" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
            "CENP-A containing nucleosome assembly at centromere" evidence=TAS]
            [GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
            catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
            GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
            GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
            GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
            OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
            EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
            UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
            IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
            PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
            Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
            CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
            HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
            InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
            ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
            Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
        Length = 1052

 Score = 296 (109.3 bits), Expect = 6.2e-25, P = 6.2e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LDILE         Y RLDG T   ERQ  ++A+N   S  F  +LSTRAGG G+NL  
Sbjct:   511 VLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLAT 570

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA DR HRIGQT+ V ++R +T  TV+E + E A+ KL LD+ 
Sbjct:   571 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 630

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  VD   +   K   E+L  I  G
Sbjct:   631 VIQQGRLVDQNLNKIGKD--EMLQMIRHG 657


>ASPGD|ASPL0000048785 [details] [associations]
            symbol:AN1956 species:162425 "Emericella nidulans"
            [GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
            heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
            body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
            evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
            evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030466 "chromatin silencing at silent mating-type cassette"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
            [GO:0030702 "chromatin silencing at centromere" evidence=IEA]
            InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
            GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
            EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
            EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
            HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
        Length = 1443

 Score = 297 (109.6 bits), Expect = 7.8e-25, P = 7.8e-25
 Identities = 57/132 (43%), Positives = 89/132 (67%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTGA 60
             LD++E  LD +G+ +RRLDG     E+Q ++D +N + S  FA LLSTR+GG G+NL  A
Sbjct:   951 LDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAENSPYFAFLLSTRSGGVGINLATA 1010

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+I D DFNP  D QA  R HRIGQ   V +++L+ +G+ +E + +I ++K++LD  +
Sbjct:  1011 DTVIIMDPDFNPHQDMQALSRAHRIGQKNKVLVFQLMIRGSAEEKIMQIGRKKMVLDHVL 1070

Query:   121 LESGVEVDNEGD 132
             ++     D++G+
Sbjct:  1071 IDRMAAEDDDGE 1082


>UNIPROTKB|F1NHJ5 [details] [associations]
            symbol:BTAF1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000357
            InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
            Pfam:PF02985 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            InterPro:IPR021133 PROSITE:PS50077 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI
            InterPro:IPR022707 Pfam:PF12054 GeneTree:ENSGT00630000089754
            EMBL:AADN02046597 IPI:IPI00572097 Ensembl:ENSGALT00000011235
            Uniprot:F1NHJ5
        Length = 1845

 Score = 298 (110.0 bits), Expect = 8.4e-25, P = 8.4e-25
 Identities = 65/135 (48%), Positives = 85/135 (62%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS    +R +IV  FNND SI   LL+T  GG GLNL
Sbjct:  1650 MLDIVEHDLLRPQLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 1709

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ R V +YRL+T+GT++E +  + K K+ I 
Sbjct:  1710 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIA 1769

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:  1770 NTVISQENASLQSMG 1784


>CGD|CAL0001390 [details] [associations]
            symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
            "SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
            complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
            "negative regulation of histone H3-K9 acetylation" evidence=IEA]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
            acetylation" evidence=IEA] [GO:0006369 "termination of RNA
            polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0006368 "transcription elongation
            from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
            of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
            process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:2000104 "negative regulation of
            DNA-dependent DNA replication" evidence=IEA] [GO:0042766
            "nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
            transcriptional start site selection at RNA polymerase II promoter"
            evidence=IEA] [GO:0006363 "termination of RNA polymerase I
            transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
            binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
            evidence=IEA] [GO:0035064 "methylated histone residue binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
            EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
            RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
            STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
            KEGG:cal:CaO19.3035 Uniprot:Q5AI17
        Length = 1410

 Score = 296 (109.3 bits), Expect = 9.6e-25, P = 9.6e-25
 Identities = 64/138 (46%), Positives = 89/138 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             MLDIL   + + G  ++RLDG+   ++R+  +D FN   S  FA LLSTRAGG G+NL  
Sbjct:   702 MLDILGDYMFIKGYQFQRLDGTVPSSKRKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMT 761

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NPQ D QA  R HRIGQ   V++YR V+K TV+E + E A++K++L+ A
Sbjct:   762 ADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYA 821

Query:   120 VLESGVEVDNEGDTSDKT 137
             ++  G+  D       KT
Sbjct:   822 IISLGI-TDPSAKNGSKT 838


>SGD|S000005816 [details] [associations]
            symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
            remodeling complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
            [GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
            "chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
            regulation of mating type switching" evidence=IMP] [GO:0031492
            "nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
            mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
            repair" evidence=IMP] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
            [GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
            [GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
            "histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
            "strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
            transcription from RNA polymerase II promoter in response to amino
            acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=IPI]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
            SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
            GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
            GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
            InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
            PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
            GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
            KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
            EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
            RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
            DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
            PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
            KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
            Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
            GO:GO:0031496 Uniprot:P22082
        Length = 1703

 Score = 296 (109.3 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 68/147 (46%), Positives = 95/147 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             ++DI+E  L  I + Y RLDG T+  ER  ++  FN   S + C +LSTRAGG GLNL  
Sbjct:  1115 IMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQT 1174

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA+DR HRIGQ   V I RL+T  +V+E + E A +KL +D  
Sbjct:  1175 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGK 1234

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSIL 146
             V+++G + DN+  TS++    +L S+L
Sbjct:  1235 VIQAG-KFDNKS-TSEEQEA-LLRSLL 1258


>POMBASE|SPAC1250.01 [details] [associations]
            symbol:snf21 "ATP-dependent DNA helicase Snf21"
            species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
            chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
            transcription factor activity" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
            remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
            evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
            GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
            GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
            KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
            ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
            EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
            OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
        Length = 1199

 Score = 294 (108.6 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 63/137 (45%), Positives = 92/137 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
             +++I+E  L      Y RLDGST+  +R  ++  FN+ T+ +   LLSTRAGG GLNL  
Sbjct:   764 IMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQT 823

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA+DR HRIGQT+ V IYRL+T+ +V+EN+   A+ KL +D  
Sbjct:   824 ADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGK 883

Query:   120 VLESGVEVDNEGDTSDK 136
             V+++G + DN+    ++
Sbjct:   884 VIQAG-KFDNKSTPEER 899


>UNIPROTKB|E1BFL2 [details] [associations]
            symbol:ERCC6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0047485 "protein N-terminus binding" evidence=IEA]
            [GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
            [GO:0032786 "positive regulation of DNA-dependent transcription,
            elongation" evidence=IEA] [GO:0032403 "protein complex binding"
            evidence=IEA] [GO:0010332 "response to gamma radiation"
            evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
            [GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
            to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
            signaling pathway in response to DNA damage" evidence=IEA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
            [GO:0008023 "transcription elongation factor complex" evidence=IEA]
            [GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
            "activation of JUN kinase activity" evidence=IEA] [GO:0007256
            "activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
            dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
            evidence=IEA] [GO:0006283 "transcription-coupled
            nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
            GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
            GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
            GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
            GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
            GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
            EMBL:DAAA02062232 EMBL:DAAA02062233 EMBL:DAAA02062234
            EMBL:DAAA02062235 IPI:IPI00733931 Ensembl:ENSBTAT00000046144
            Uniprot:E1BFL2
        Length = 1482

 Score = 295 (108.9 bits), Expect = 1.3e-24, P = 1.3e-24
 Identities = 59/122 (48%), Positives = 81/122 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L     +Y ++DG+T +  RQ ++  +N DTSIF  LL+TR GG G+NLTGA
Sbjct:   858 MLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGA 917

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V+I+D D+NP  D QA +R  RIGQ + VT+YRL+T GT++E +Y     K  L   V
Sbjct:   918 NRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRV 977

Query:   121 LE 122
             L+
Sbjct:   978 LK 979


>TAIR|locus:2182978 [details] [associations]
            symbol:CHR17 "chromatin remodeling factor17" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
            [GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
            cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
            by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
            process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
            evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
            [GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=RCA]
            [GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
            proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
            process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
            [GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
            "gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
            chromosome organization" evidence=RCA] [GO:0045492 "xylan
            biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
            methylation" evidence=RCA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=IGI] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
            IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
            ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
            EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
            PhylomeDB:F4JY25 Uniprot:F4JY25
        Length = 1072

 Score = 293 (108.2 bits), Expect = 1.3e-24, P = 1.3e-24
 Identities = 61/125 (48%), Positives = 83/125 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LDILE  L   G  Y R+DG+T   ER A ++A+N   S  F  LLSTRAGG G+NL  
Sbjct:   523 LLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLAT 582

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ+D QA+DR HRIGQ + V ++R  T+  ++  V E A +KL LDA 
Sbjct:   583 ADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDAL 642

Query:   120 VLESG 124
             V++ G
Sbjct:   643 VIQQG 647


>CGD|CAL0003962 [details] [associations]
            symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
            "RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
            centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
            evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
            [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
            "transcription elongation from RNA polymerase II promoter"
            evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
            "cytoskeleton organization" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
            "G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
            "DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
            PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
            ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
            GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
            Uniprot:Q5AEM9
        Length = 1303

 Score = 294 (108.6 bits), Expect = 1.4e-24, P = 1.4e-24
 Identities = 65/137 (47%), Positives = 89/137 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             ++DI+E  L    + Y RLDGST+  ERQ ++  FN  D+  F  LLSTRAGG GLNL  
Sbjct:   848 IMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQT 907

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA+DR HRIGQ   V I RL+T  +V+E + E A +KL +D  
Sbjct:   908 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGK 967

Query:   120 VLESGVEVDNEGDTSDK 136
             V+++G + DN+    ++
Sbjct:   968 VIQAG-KFDNKSTAEEQ 983


>WB|WBGene00016868 [details] [associations]
            symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
            ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
            EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
            UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
            NextBio:910548 Uniprot:Q22944
        Length = 1336

 Score = 294 (108.6 bits), Expect = 1.5e-24, P = 1.5e-24
 Identities = 67/147 (45%), Positives = 94/147 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
             M+ I+E  L    + Y RLDGST+  ER A++D FN   S  F  +LSTRAGG GLNL  
Sbjct:   711 MMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQT 770

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA+DR HRIGQ   V ++RL+T  +V+E +   A+ KL +D  
Sbjct:   771 ADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDEK 830

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSIL 146
             V+++G + DN    +++   EIL +I+
Sbjct:   831 VIQAG-KFDNRSTGAERR--EILENII 854


>POMBASE|SPAC29B12.01 [details] [associations]
            symbol:ino80 "SNF2 family helicase Ino80" species:4896
            "Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
            EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
            GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
            RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
            EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
            OMA:INDHNSA NextBio:20811604 Uniprot:O14148
        Length = 1604

 Score = 295 (108.9 bits), Expect = 1.5e-24, P = 1.5e-24
 Identities = 57/124 (45%), Positives = 82/124 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+D++E  L      Y RLDGS+++++R+ +V  +     +F  LLSTRAGG G+NLT A
Sbjct:  1457 MIDLMEEYLTFRQYKYLRLDGSSKISQRRDMVTEWQTRPELFVFLLSTRAGGLGINLTAA 1516

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+ +D D+NP ID QA DR HRIGQ + VT+YR +T+GT++E +   AK K  +   V
Sbjct:  1517 DTVIFYDSDWNPSIDSQAMDRAHRIGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVV 1576

Query:   121 LESG 124
             +  G
Sbjct:  1577 ISGG 1580


>UNIPROTKB|F1N544 [details] [associations]
            symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
            "chromatin assembly or disassembly" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
            IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
            Uniprot:F1N544
        Length = 1998

 Score = 296 (109.3 bits), Expect = 1.5e-24, P = 1.5e-24
 Identities = 66/143 (46%), Positives = 86/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFN-NDTSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  LD  G  Y R+DG      RQ  +D FN +    F  LLSTRAGG G+NL  
Sbjct:  1084 MLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAHGAQQFCFLLSTRAGGLGINLAT 1143

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA  R HRIGQ   V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1144 ADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHL 1203

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1204 VVRPGLG-SKAGSMSKQELDDIL 1225


>TAIR|locus:2054011 [details] [associations]
            symbol:CHR8 "chromatin remodeling 8" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
            binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006281 "DNA repair" evidence=IMP] [GO:0010332 "response to
            gamma radiation" evidence=IMP] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003677 GO:GO:0006281 GO:GO:0010332 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:AC005724 HOGENOM:HOG000170952 KO:K10841 IPI:IPI00524515
            PIR:C84568 RefSeq:NP_179466.1 UniGene:At.39947
            ProteinModelPortal:Q9ZV43 SMR:Q9ZV43 STRING:Q9ZV43 PaxDb:Q9ZV43
            PRIDE:Q9ZV43 EnsemblPlants:AT2G18760.1 GeneID:816391
            KEGG:ath:AT2G18760 TAIR:At2g18760 InParanoid:Q9ZV43 OMA:TETSNIF
            PhylomeDB:Q9ZV43 ProtClustDB:CLSN2683061 ArrayExpress:Q9ZV43
            Genevestigator:Q9ZV43 Uniprot:Q9ZV43
        Length = 1187

 Score = 293 (108.2 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 59/123 (47%), Positives = 81/123 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L     +YRR+DG T V +R A++D FNN   +F  +L+T+ GG G NLTGA
Sbjct:   755 MLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTTKVGGLGTNLTGA 814

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V+I D D+NP  D QA +R  RIGQ + VT+YRL+T+GT++E VY     K  L   +
Sbjct:   815 NRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKI 874

Query:   121 LES 123
             L++
Sbjct:   875 LKN 877


>UNIPROTKB|E2QSK6 [details] [associations]
            symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0047485 "protein N-terminus binding"
            evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
            evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
            transcription, elongation" evidence=IEA] [GO:0032403 "protein
            complex binding" evidence=IEA] [GO:0010332 "response to gamma
            radiation" evidence=IEA] [GO:0010224 "response to UV-B"
            evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
            [GO:0009636 "response to toxic substance" evidence=IEA] [GO:0008630
            "intrinsic apoptotic signaling pathway in response to DNA damage"
            evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IEA] [GO:0008023 "transcription elongation factor complex"
            evidence=IEA] [GO:0008022 "protein C-terminus binding"
            evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
            evidence=IEA] [GO:0007256 "activation of JNKK activity"
            evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
            [GO:0006284 "base-excision repair" evidence=IEA] [GO:0006283
            "transcription-coupled nucleotide-excision repair" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0000303 "response to superoxide"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
            GO:GO:0009636 GO:GO:0003682 GO:GO:0045494 GO:GO:0010332
            GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
            GO:GO:0008094 GO:GO:0008023 GO:GO:0032786 GO:GO:0006290
            GO:GO:0007256 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
            OMA:NGEMQIF GO:GO:0000303 EMBL:AAEX03015368 RefSeq:XP_534944.2
            UniGene:Cfa.1909 Ensembl:ENSCAFT00000010674 GeneID:477747
            KEGG:cfa:477747 NextBio:20853169 Uniprot:E2QSK6
        Length = 1486

 Score = 294 (108.6 bits), Expect = 1.7e-24, P = 1.7e-24
 Identities = 59/122 (48%), Positives = 81/122 (66%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L     +Y ++DG+T +  RQ ++  +N DTSIF  LL+TR GG G+NLTGA
Sbjct:   862 MLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLTGA 921

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V+I+D D+NP  D QA +R  RIGQ + VT+YRL+T GT++E +Y     K  L   V
Sbjct:   922 NRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRV 981

Query:   121 LE 122
             L+
Sbjct:   982 LK 983


>ASPGD|ASPL0000042729 [details] [associations]
            symbol:AN2278 species:162425 "Emericella nidulans"
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
            SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
            GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
            ProteinModelPortal:Q5BB02 STRING:Q5BB02
            EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
            OMA:GSDHSSP Uniprot:Q5BB02
        Length = 1407

 Score = 293 (108.2 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 63/137 (45%), Positives = 90/137 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +++I+E  L + G+ Y RLDGST+  +R  ++  FN  D+  F  LLSTRAGG GLNL  
Sbjct:   884 IMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAPDSEYFCFLLSTRAGGLGLNLQT 943

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA+DR HRIGQ   V I RL+T  +V+E + E A+ KL +D  
Sbjct:   944 ADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERAQFKLDMDGK 1003

Query:   120 VLESGVEVDNEGDTSDK 136
             V+++G + DN+    ++
Sbjct:  1004 VIQAG-KFDNKSTNEER 1019


>ZFIN|ZDB-GENE-040426-892 [details] [associations]
            symbol:chd1l "chromodomain helicase DNA binding
            protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
            [GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
            "ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
            ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
            GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
            HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
            HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
            EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
            ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
            KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
            ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
        Length = 1026

 Score = 290 (107.1 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 63/124 (50%), Positives = 80/124 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL+  L+  G +Y RLDGS +  ER   +  F+    +F  LLST+AGG G+NLT A
Sbjct:   364 MLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTK-DVFIFLLSTKAGGVGMNLTAA 422

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQTRPV + RL+ + T++E +Y  A  KL L   V
Sbjct:   423 DTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTV 482

Query:   121 LESG 124
             +E G
Sbjct:   483 IEEG 486


>MGI|MGI:1915308 [details] [associations]
            symbol:Chd1l "chromodomain helicase DNA binding protein
            1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
            catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
            GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
            HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
            EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
            EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
            UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
            DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
            PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
            UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
            InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
            Uniprot:Q9CXF7
        Length = 900

 Score = 289 (106.8 bits), Expect = 2.7e-24, P = 2.7e-24
 Identities = 64/124 (51%), Positives = 78/124 (62%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL+  +D  G +Y R+DGS +  ER   +  F N   IF  LLSTRAGG G+NLT A
Sbjct:   369 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP-IFVFLLSTRAGGVGMNLTAA 427

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQ + V + RL+ + TV+E VY  A  KL L   V
Sbjct:   428 DTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMV 487

Query:   121 LESG 124
             +E G
Sbjct:   488 IEGG 491


>UNIPROTKB|K7EMY3 [details] [associations]
            symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
            HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
        Length = 1060

 Score = 290 (107.1 bits), Expect = 2.7e-24, P = 2.7e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:   435 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 494

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AKRK++L   
Sbjct:   495 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 554

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  + + + +IL
Sbjct:   555 VVRPGLG-SKSGSMTKQELDDIL 576


>UNIPROTKB|I3LD21 [details] [associations]
            symbol:I3LD21 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR022707
            Pfam:PF12054 GeneTree:ENSGT00630000089754
            Ensembl:ENSSSCT00000029375 Uniprot:I3LD21
        Length = 1845

 Score = 293 (108.2 bits), Expect = 2.9e-24, P = 2.9e-24
 Identities = 65/135 (48%), Positives = 85/135 (62%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS    +R +IV  FNND SI   LL+T  GG GLNL
Sbjct:  1652 MLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 1711

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ R V +YRL+T+GT++E +  + K K+ I 
Sbjct:  1712 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIA 1771

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:  1772 NTVISQENSSLQSMG 1786


>RGD|1564130 [details] [associations]
            symbol:Btaf1 "BTAF1 RNA polymerase II, B-TFIID transcription
            factor-associated, (Mot1 homolog, S. cerevisiae)" species:10116
            "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 RGD:1564130 GO:GO:0005524 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR022707
            Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:AC096310
            IPI:IPI00370629 PRIDE:F1LW16 Ensembl:ENSRNOT00000024465
            Uniprot:F1LW16
        Length = 1848

 Score = 293 (108.2 bits), Expect = 2.9e-24, P = 2.9e-24
 Identities = 65/135 (48%), Positives = 85/135 (62%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS    +R +IV  FNND SI   LL+T  GG GLNL
Sbjct:  1655 MLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 1714

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ R V +YRL+T+GT++E +  + K K+ I 
Sbjct:  1715 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIA 1774

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:  1775 NTVISQENSSLQSMG 1789


>UNIPROTKB|O14981 [details] [associations]
            symbol:BTAF1 "TATA-binding protein-associated factor 172"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=NAS] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045892 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            PROSITE:PS50077 GO:GO:0003677 GO:GO:0003700 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:AJ001017 EMBL:AF038362 EMBL:AF166118 IPI:IPI00024802
            RefSeq:NP_003963.1 UniGene:Hs.500526 ProteinModelPortal:O14981
            SMR:O14981 IntAct:O14981 MINT:MINT-2795412 STRING:O14981
            PhosphoSite:O14981 PaxDb:O14981 PeptideAtlas:O14981 PRIDE:O14981
            Ensembl:ENST00000265990 GeneID:9044 KEGG:hsa:9044 UCSC:uc001khr.3
            CTD:9044 GeneCards:GC10P093673 HGNC:HGNC:17307 HPA:HPA042274
            MIM:605191 neXtProt:NX_O14981 PharmGKB:PA25437 HOGENOM:HOG000210415
            HOVERGEN:HBG017883 InParanoid:O14981 KO:K15192 OMA:TKQEGAI
            OrthoDB:EOG4W0XC6 PhylomeDB:O14981 GenomeRNAi:9044 NextBio:33875
            ArrayExpress:O14981 Bgee:O14981 CleanEx:HS_BTAF1
            Genevestigator:O14981 GermOnline:ENSG00000095564 InterPro:IPR022707
            Pfam:PF12054 Uniprot:O14981
        Length = 1849

 Score = 293 (108.2 bits), Expect = 2.9e-24, P = 2.9e-24
 Identities = 65/135 (48%), Positives = 85/135 (62%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS    +R +IV  FNND SI   LL+T  GG GLNL
Sbjct:  1656 MLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 1715

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ R V +YRL+T+GT++E +  + K K+ I 
Sbjct:  1716 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIA 1775

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:  1776 NTVISQENSSLQSMG 1790


>UNIPROTKB|F1SCA0 [details] [associations]
            symbol:BTAF1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
            Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:CT868714
            EMBL:CT954286 Ensembl:ENSSSCT00000011455 Uniprot:F1SCA0
        Length = 1850

 Score = 293 (108.2 bits), Expect = 2.9e-24, P = 2.9e-24
 Identities = 65/135 (48%), Positives = 85/135 (62%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS    +R +IV  FNND SI   LL+T  GG GLNL
Sbjct:  1657 MLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 1716

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ R V +YRL+T+GT++E +  + K K+ I 
Sbjct:  1717 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIA 1776

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:  1777 NTVISQENSSLQSMG 1791


>UNIPROTKB|I3LTQ1 [details] [associations]
            symbol:I3LTQ1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR022707
            Pfam:PF12054 GeneTree:ENSGT00630000089754
            Ensembl:ENSSSCT00000027675 OMA:ISESSME Uniprot:I3LTQ1
        Length = 1850

 Score = 293 (108.2 bits), Expect = 2.9e-24, P = 2.9e-24
 Identities = 65/135 (48%), Positives = 85/135 (62%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS    +R +IV  FNND SI   LL+T  GG GLNL
Sbjct:  1657 MLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 1716

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ R V +YRL+T+GT++E +  + K K+ I 
Sbjct:  1717 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIA 1776

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:  1777 NTVISQENSSLQSMG 1791


>UNIPROTKB|E2QWL4 [details] [associations]
            symbol:BTAF1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
            Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:AAEX03015408
            Ensembl:ENSCAFT00000011817 NextBio:20860516 Uniprot:E2QWL4
        Length = 1879

 Score = 293 (108.2 bits), Expect = 2.9e-24, P = 2.9e-24
 Identities = 65/135 (48%), Positives = 85/135 (62%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS    +R +IV  FNND SI   LL+T  GG GLNL
Sbjct:  1656 MLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 1715

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ R V +YRL+T+GT++E +  + K K+ I 
Sbjct:  1716 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIA 1775

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:  1776 NTVISQENSSLQSMG 1790


>RGD|1311923 [details] [associations]
            symbol:Chd3 "chromodomain helicase DNA binding protein 3"
            species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
            [GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
            complex" evidence=ISO] [GO:0045111 "intermediate filament
            cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
            evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
            InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
            SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
            IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
            STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
        Length = 1925

 Score = 293 (108.2 bits), Expect = 3.0e-24, P = 3.0e-24
 Identities = 66/143 (46%), Positives = 85/143 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  LD  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1044 MLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1103

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA  R HRIGQ   V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1104 ADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHL 1163

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1164 VVRPGLG-SKAGSMSKQELDDIL 1185


>UNIPROTKB|E2RTI2 [details] [associations]
            symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
            "chromatin assembly or disassembly" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
            EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
        Length = 1998

 Score = 293 (108.2 bits), Expect = 3.2e-24, P = 3.2e-24
 Identities = 66/143 (46%), Positives = 85/143 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  LD  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1086 MLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1145

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA  R HRIGQ   V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1146 ADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHL 1205

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1206 VVRPGLG-SKAGSMSKQELDDIL 1227


>UNIPROTKB|Q12873 [details] [associations]
            symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
            "zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
            [GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
            filament cytoskeleton" evidence=IDA] InterPro:IPR001841
            InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
            EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
            GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
            InterPro:IPR019786 PROSITE:PS01359
            Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
            IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
            RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
            SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
            STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
            PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
            GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
            GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
            HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
            HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
            GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
            CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
            Uniprot:Q12873
        Length = 2000

 Score = 293 (108.2 bits), Expect = 3.2e-24, P = 3.2e-24
 Identities = 66/143 (46%), Positives = 85/143 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  LD  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1088 MLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1147

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA  R HRIGQ   V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1148 ADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHL 1207

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1208 VVRPGLG-SKAGSMSKQELDDIL 1229


>UNIPROTKB|F1ST12 [details] [associations]
            symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
            "chromatin assembly or disassembly" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
            EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
            Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
            Uniprot:F1ST12
        Length = 2002

 Score = 293 (108.2 bits), Expect = 3.2e-24, P = 3.2e-24
 Identities = 66/143 (46%), Positives = 85/143 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  LD  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1088 MLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1147

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA  R HRIGQ   V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1148 ADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHL 1207

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1208 VVRPGLG-SKAGSMSKQELDDIL 1229


>CGD|CAL0000831 [details] [associations]
            symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
            "Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
            "histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
            at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043618 "regulation of transcription from RNA polymerase II
            promoter in response to stress" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
            RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
            GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
            Uniprot:Q59KI4
        Length = 1387

 Score = 291 (107.5 bits), Expect = 3.2e-24, P = 3.2e-24
 Identities = 58/113 (51%), Positives = 76/113 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             M+ I E  L      Y RLDGST +  R+ +V A+  +  IF  +LSTRAGG GLNLT A
Sbjct:  1264 MMQIFEEYLAYKSYKYIRLDGSTTIESRREMVQAWQTNPEIFIFMLSTRAGGLGLNLTSA 1323

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRK 113
             DTV+ +D D+NP ID QA DR HRIGQT+ V ++RLVT+ T+++ + E AK K
Sbjct:  1324 DTVIFYDSDWNPTIDSQAMDRAHRIGQTKQVKVFRLVTRNTIEQKILERAKEK 1376


>UNIPROTKB|F1LPP7 [details] [associations]
            symbol:Chd3 "Protein Chd3" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
            Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
        Length = 2020

 Score = 293 (108.2 bits), Expect = 3.2e-24, P = 3.2e-24
 Identities = 66/143 (46%), Positives = 85/143 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  LD  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1139 MLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1198

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA  R HRIGQ   V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1199 ADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHL 1258

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1259 VVRPGLG-SKAGSMSKQELDDIL 1280


>CGD|CAL0005444 [details] [associations]
            symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
            "SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
            evidence=IMP] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
            transcription factor binding" evidence=IEA] [GO:0070577 "histone
            acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
            binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
            [GO:0044182 "filamentous growth of a population of unicellular
            organisms" evidence=IMP] [GO:1900430 "positive regulation of
            filamentous growth of a population of unicellular organisms"
            evidence=IMP] [GO:0036178 "filamentous growth of a population of
            unicellular organisms in response to neutral pH" evidence=IMP]
            [GO:1900442 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to neutral pH"
            evidence=IMP] [GO:0036180 "filamentous growth of a population of
            unicellular organisms in response to biotic stimulus" evidence=IMP]
            [GO:1900445 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to biotic stimulus"
            evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
            [GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
            "regulation of single-species biofilm formation on inanimate
            substrate" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
            evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0031496 "positive regulation of mating type
            switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
            replication" evidence=IEA] [GO:0061412 "positive regulation of
            transcription from RNA polymerase II promoter in response to amino
            acid starvation" evidence=IEA] [GO:0036244 "cellular response to
            neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
            stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
            GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
            GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
            GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
            RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
            STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
        Length = 1690

 Score = 292 (107.8 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 62/137 (45%), Positives = 90/137 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +++I+E  L   G+ Y RLDG T+  +R  ++ +FN  D+  F  LLSTRAGG GLNL  
Sbjct:  1130 IMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT 1189

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA+DR HRIGQ   V I RL+T+ +V+E + E A +KL +D  
Sbjct:  1190 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGK 1249

Query:   120 VLESGVEVDNEGDTSDK 136
             V+++G + DN+    ++
Sbjct:  1250 VIQAG-KFDNKSTAEEQ 1265


>UNIPROTKB|Q5AM49 [details] [associations]
            symbol:SNF2 "Putative uncharacterized protein SNF2"
            species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0009405
            "pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
            evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
            [GO:0036178 "filamentous growth of a population of unicellular
            organisms in response to neutral pH" evidence=IMP] [GO:0036180
            "filamentous growth of a population of unicellular organisms in
            response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
            response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
            growth of a population of unicellular organisms" evidence=IMP]
            [GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
            [GO:1900430 "positive regulation of filamentous growth of a
            population of unicellular organisms" evidence=IMP] [GO:1900442
            "positive regulation of filamentous growth of a population of
            unicellular organisms in response to neutral pH" evidence=IMP]
            [GO:1900445 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to biotic stimulus"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
            GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
            GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
            GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
            RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
            STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
        Length = 1690

 Score = 292 (107.8 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 62/137 (45%), Positives = 90/137 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +++I+E  L   G+ Y RLDG T+  +R  ++ +FN  D+  F  LLSTRAGG GLNL  
Sbjct:  1130 IMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT 1189

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA+DR HRIGQ   V I RL+T+ +V+E + E A +KL +D  
Sbjct:  1190 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGK 1249

Query:   120 VLESGVEVDNEGDTSDK 136
             V+++G + DN+    ++
Sbjct:  1250 VIQAG-KFDNKSTAEEQ 1265


>UNIPROTKB|F1M7Q0 [details] [associations]
            symbol:Chd3 "Protein Chd3" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
            IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
        Length = 2054

 Score = 293 (108.2 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 66/143 (46%), Positives = 85/143 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  LD  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1139 MLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1198

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA  R HRIGQ   V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1199 ADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHL 1258

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1259 VVRPGLG-SKAGSMSKQELDDIL 1280


>UNIPROTKB|E9PG89 [details] [associations]
            symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
            disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
            InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
            SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
            GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
            KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
            NextBio:4590 EMBL:AC104581 IPI:IPI00465222
            ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
            Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
            ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
        Length = 2059

 Score = 293 (108.2 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 66/143 (46%), Positives = 85/143 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  LD  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1147 MLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1206

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA  R HRIGQ   V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1207 ADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHL 1266

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1267 VVRPGLG-SKAGSMSKQELDDIL 1288


>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
            symbol:PF11_0053 "PfSNF2L" species:5833
            "Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
            EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
            ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
            EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
            EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
            ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
        Length = 1426

 Score = 291 (107.5 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 62/145 (42%), Positives = 94/145 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
             +LDI++         Y R+DGST   ERQ  ++ FN   S  F  LLSTRAGG G+NLT 
Sbjct:   654 LLDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTT 713

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V++ D D+NPQ+D QA DR HRIGQ + V +YR VT+ +V+E + E A +KL LD+ 
Sbjct:   714 ADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSL 773

Query:   120 VLESG-VEVDNEGDTSDKTMGEILS 143
             +++ G + +++  + + + + +IL+
Sbjct:   774 IIQKGKLNLNSAKENNKQELHDILN 798


>UNIPROTKB|Q8IIW0 [details] [associations]
            symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
            falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
            EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
            ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
            EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
            EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
            ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
        Length = 1426

 Score = 291 (107.5 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 62/145 (42%), Positives = 94/145 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
             +LDI++         Y R+DGST   ERQ  ++ FN   S  F  LLSTRAGG G+NLT 
Sbjct:   654 LLDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTT 713

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V++ D D+NPQ+D QA DR HRIGQ + V +YR VT+ +V+E + E A +KL LD+ 
Sbjct:   714 ADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSL 773

Query:   120 VLESG-VEVDNEGDTSDKTMGEILS 143
             +++ G + +++  + + + + +IL+
Sbjct:   774 IIQKGKLNLNSAKENNKQELHDILN 798


>UNIPROTKB|Q3B7N1 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
            process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
            remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
            GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
            GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
            UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
            GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
            HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
            NextBio:20874039 Uniprot:Q3B7N1
        Length = 897

 Score = 288 (106.4 bits), Expect = 3.4e-24, P = 3.4e-24
 Identities = 67/145 (46%), Positives = 84/145 (57%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL+  LD  G +Y R+DGS +  ER   +  F     IF  LLSTRAGG G+NLT A
Sbjct:   377 MLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFTFLLSTRAGGVGMNLTAA 435

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQ + V + RL+ + TV+E VY  A  KL L   +
Sbjct:   436 DTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTI 495

Query:   121 LESG---VEVDNEGDTSDKTMGEIL 142
             +E G   +        +D  + EIL
Sbjct:   496 IEGGHFTLGAQKPAADADLQLSEIL 520


>WB|WBGene00002637 [details] [associations]
            symbol:let-418 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
            acting on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0048557 "embryonic digestive tract
            morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
            factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
            evidence=ISS] [GO:0040027 "negative regulation of vulval
            development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
            RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
            SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
            GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
            OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
        Length = 1829

 Score = 292 (107.8 bits), Expect = 3.6e-24, P = 3.6e-24
 Identities = 65/144 (45%), Positives = 89/144 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLDI+E   +  G  Y R+DGS     RQ  +D +N      F  LLSTRAGG G+NL  
Sbjct:   954 MLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLAT 1013

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HR+GQ   V IYR VTK +V+E +  +AK+K++L+  
Sbjct:  1014 ADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHL 1073

Query:   120 VLESGVEVDNEGDTSDKT-MGEIL 142
             V+ +G+    EG T  KT + ++L
Sbjct:  1074 VVRAGLG-GKEGKTMSKTELDDVL 1096


>UNIPROTKB|G5EBZ4 [details] [associations]
            symbol:let-418 "Protein let-418" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
            RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
            SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
            GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
            OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
        Length = 1829

 Score = 292 (107.8 bits), Expect = 3.6e-24, P = 3.6e-24
 Identities = 65/144 (45%), Positives = 89/144 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLDI+E   +  G  Y R+DGS     RQ  +D +N      F  LLSTRAGG G+NL  
Sbjct:   954 MLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLAT 1013

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HR+GQ   V IYR VTK +V+E +  +AK+K++L+  
Sbjct:  1014 ADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHL 1073

Query:   120 VLESGVEVDNEGDTSDKT-MGEIL 142
             V+ +G+    EG T  KT + ++L
Sbjct:  1074 VVRAGLG-GKEGKTMSKTELDDVL 1096


>DICTYBASE|DDB_G0281441 [details] [associations]
            symbol:ercc6 "DNA excision repair protein 6"
            species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=ISS] [GO:0006289 "nucleotide-excision repair"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281441 GO:GO:0005524
            GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003677
            EMBL:AAFI02000041 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006289 GO:GO:0008094 KO:K10841
            RefSeq:XP_640679.1 ProteinModelPortal:Q54TY2 STRING:Q54TY2
            EnsemblProtists:DDB0232361 GeneID:8623063 KEGG:ddi:DDB_G0281441
            InParanoid:Q54TY2 OMA:NIHKERW ProtClustDB:CLSZ2736745
            Uniprot:Q54TY2
        Length = 1655

 Score = 291 (107.5 bits), Expect = 4.1e-24, P = 4.1e-24
 Identities = 58/123 (47%), Positives = 82/123 (66%)

Query:     1 MLDILE-WTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTG 59
             MLDI+E +  D     Y R+DG+T + +RQ +V+ FN D S+F  LL+T+ GG GLNLTG
Sbjct:  1141 MLDIVEQYIRDSTQFNYLRMDGTTSIRQRQCLVEQFNIDPSLFIFLLTTKVGGLGLNLTG 1200

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             A+ V++ D D+NP  D QA +R +RIGQ + VTIYRL+T GT++E +Y     K  L   
Sbjct:  1201 ANRVILFDPDWNPSTDMQARERVYRIGQKKAVTIYRLITLGTIEEKIYHRQIYKQFLTNK 1260

Query:   120 VLE 122
             +L+
Sbjct:  1261 ILK 1263


>UNIPROTKB|F1Q2U2 [details] [associations]
            symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
            PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
            GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
            Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
        Length = 898

 Score = 287 (106.1 bits), Expect = 4.3e-24, P = 4.3e-24
 Identities = 66/145 (45%), Positives = 85/145 (58%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL+  +D  G +Y R+DGS +  ER   +  F     +F  LLSTRAGG G+NLT A
Sbjct:   376 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-VFVFLLSTRAGGVGMNLTAA 434

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQ + V + RL+ + TV+E VY  A  KL L  A+
Sbjct:   435 DTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNAI 494

Query:   121 LESG---VEVDNEGDTSDKTMGEIL 142
             +E G   +        +D  + EIL
Sbjct:   495 IEGGHFTLGAQKPAADADLQLSEIL 519


>UNIPROTKB|F1SDX0 [details] [associations]
            symbol:ERCC6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
            [GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
            [GO:0032786 "positive regulation of DNA-dependent transcription,
            elongation" evidence=IEA] [GO:0032403 "protein complex binding"
            evidence=IEA] [GO:0010332 "response to gamma radiation"
            evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
            [GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
            to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
            signaling pathway in response to DNA damage" evidence=IEA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
            [GO:0008023 "transcription elongation factor complex" evidence=IEA]
            [GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
            "activation of JUN kinase activity" evidence=IEA] [GO:0007256
            "activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
            dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
            evidence=IEA] [GO:0006283 "transcription-coupled
            nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
            GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
            GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
            GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
            GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
            GeneTree:ENSGT00590000083118 KO:K10841 OMA:NGEMQIF GO:GO:0000303
            EMBL:CT990602 EMBL:CT990615 RefSeq:XP_003483566.1
            Ensembl:ENSSSCT00000011375 GeneID:100738583 KEGG:ssc:100738583
            Uniprot:F1SDX0
        Length = 1481

 Score = 290 (107.1 bits), Expect = 4.5e-24, P = 4.5e-24
 Identities = 58/122 (47%), Positives = 80/122 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDILE  L     +Y ++DG+T +  RQ ++  +N D SIF  LL+TR GG G+NLTGA
Sbjct:   856 MLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRYNEDASIFVFLLTTRVGGLGVNLTGA 915

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V+I+D D+NP  D QA +R  RIGQ + VT+YRL+T GT++E +Y     K  L   V
Sbjct:   916 NRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRV 975

Query:   121 LE 122
             L+
Sbjct:   976 LK 977


>UNIPROTKB|F1NVT7 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
            EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
            Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
        Length = 1257

 Score = 289 (106.8 bits), Expect = 4.5e-24, P = 4.5e-24
 Identities = 63/134 (47%), Positives = 87/134 (64%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAF-NNDTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L     TY R+DG  +   RQA +D F   D+  F  LL TRAGG G+NLT A
Sbjct:   734 LDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAA 793

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:   794 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 853

Query:   121 LESGVEVDNEGDTS 134
             L+   +++ +G T+
Sbjct:   854 LQ---DINRKGGTN 864


>UNIPROTKB|F1N507 [details] [associations]
            symbol:Bt.112326 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
            Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:DAAA02058811
            EMBL:DAAA02058810 IPI:IPI00685441 Ensembl:ENSBTAT00000021438
            Uniprot:F1N507
        Length = 1845

 Score = 291 (107.5 bits), Expect = 4.7e-24, P = 4.7e-24
 Identities = 64/135 (47%), Positives = 85/135 (62%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS    +R +IV  FNND SI   LL+T  GG GLNL
Sbjct:  1652 MLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNL 1711

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL-IL 116
             TGADTVV  + D+NP  D QA DR HRIGQ + V +YRL+T+GT++E +  + K K+ I 
Sbjct:  1712 TGADTVVFVEHDWNPMRDLQAMDRAHRIGQVKVVNVYRLITRGTLEEKIMGLQKFKMNIA 1771

Query:   117 DAAVLESGVEVDNEG 131
             +  + +    + + G
Sbjct:  1772 NTVISQENSSLQSMG 1786


>ZFIN|ZDB-GENE-041111-187 [details] [associations]
            symbol:chd4a "chromodomain helicase DNA binding
            protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
            IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
            Bgee:F1QWV5 Uniprot:F1QWV5
        Length = 1930

 Score = 291 (107.5 bits), Expect = 4.9e-24, P = 4.9e-24
 Identities = 66/143 (46%), Positives = 88/143 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN   +  F  LLSTRAGG G+NL  
Sbjct:  1062 MLDLLEDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAPQFVFLLSTRAGGLGINLAT 1121

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI+D D+NP  D QA  R HRIGQ + V IYR VTK +V+E + ++AK+K++L   
Sbjct:  1122 ADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTHL 1181

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1182 VVRPGLG-SKTGSMSKQELDDIL 1203


>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
            symbol:chd4b "chromodomain helicase DNA binding
            protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
            IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
            Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
            KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
        Length = 1953

 Score = 291 (107.5 bits), Expect = 5.0e-24, P = 5.0e-24
 Identities = 65/143 (45%), Positives = 88/143 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN   +  F  LLSTRAGG G+NL  
Sbjct:  1088 MLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAGGLGINLAT 1147

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VTK +V+E + ++AK+K++L   
Sbjct:  1148 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTHL 1207

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1208 VVRPGLG-SKAGSMSKQELDDIL 1229


>UNIPROTKB|F1SSZ2 [details] [associations]
            symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
        Length = 1667

 Score = 290 (107.1 bits), Expect = 5.2e-24, P = 5.2e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:   968 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1027

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1028 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 1087

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  + + + +IL
Sbjct:  1088 VVRPGLG-SKSGSMTKQELDDIL 1109


>UNIPROTKB|B5MDZ7 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 EMBL:AL356378 GO:GO:0003676 GO:GO:0004386
            InterPro:IPR002589 PROSITE:PS51154 HGNC:HGNC:1916 ChiTaRS:CHD1L
            IPI:IPI00400835 ProteinModelPortal:B5MDZ7 SMR:B5MDZ7 STRING:B5MDZ7
            PRIDE:B5MDZ7 Ensembl:ENST00000361293 HOGENOM:HOG000074191
            HOVERGEN:HBG104833 ArrayExpress:B5MDZ7 Bgee:B5MDZ7 Uniprot:B5MDZ7
        Length = 616

 Score = 283 (104.7 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 66/145 (45%), Positives = 84/145 (57%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL+  +D  G +Y R+DGS +  ER   +  F     IF  LLSTRAGG G+NLT A
Sbjct:    94 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAA 152

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQ + V + RL+ + TV+E VY  A  KL L   +
Sbjct:   153 DTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMI 212

Query:   121 LESG---VEVDNEGDTSDKTMGEIL 142
             +E G   +        +D  + EIL
Sbjct:   213 IEGGHFTLGAQKPAADADLQLSEIL 237


>UNIPROTKB|F1RIM3 [details] [associations]
            symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
        Length = 1723

 Score = 290 (107.1 bits), Expect = 5.5e-24, P = 5.5e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:   984 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1043

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1044 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 1103

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  + + + +IL
Sbjct:  1104 VVRPGLG-SKSGSMTKQELDDIL 1125


>CGD|CAL0005422 [details] [associations]
            symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
            "chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
            growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
            evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
            [GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
            of antisense RNA transcription" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
            silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
            polymerase II transcription" evidence=IEA] [GO:0046020 "negative
            regulation of transcription from RNA polymerase II promoter by
            pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
            telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
            evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
            GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
            ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
            KEGG:cal:CaO19.7401 Uniprot:Q5A310
        Length = 1056

 Score = 287 (106.1 bits), Expect = 5.7e-24, P = 5.7e-24
 Identities = 64/145 (44%), Positives = 91/145 (62%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +LDILE         Y R+DGST   +R   +D +N  D+  F  LL+TRAGG G+NLT 
Sbjct:   481 VLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTS 540

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ D QA DR HRIGQ + V ++R VT+  ++E V E A +KL LD  
Sbjct:   541 ADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQL 600

Query:   120 VLESGVEVD---NEGDTSDKTMGEI 141
             V++ G +++   N G++ D  +G I
Sbjct:   601 VIQQGRQMNSNNNVGNSKDDLIGMI 625


>UNIPROTKB|Q5A310 [details] [associations]
            symbol:ISW2 "Putative uncharacterized protein ISW2"
            species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
            formation" evidence=IMP] [GO:0030447 "filamentous growth"
            evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
            [GO:0071280 "cellular response to copper ion" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
            GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
            ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
            KEGG:cal:CaO19.7401 Uniprot:Q5A310
        Length = 1056

 Score = 287 (106.1 bits), Expect = 5.7e-24, P = 5.7e-24
 Identities = 64/145 (44%), Positives = 91/145 (62%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +LDILE         Y R+DGST   +R   +D +N  D+  F  LL+TRAGG G+NLT 
Sbjct:   481 VLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTS 540

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+++D D+NPQ D QA DR HRIGQ + V ++R VT+  ++E V E A +KL LD  
Sbjct:   541 ADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQL 600

Query:   120 VLESGVEVD---NEGDTSDKTMGEI 141
             V++ G +++   N G++ D  +G I
Sbjct:   601 VIQQGRQMNSNNNVGNSKDDLIGMI 625


>UNIPROTKB|F1NH78 [details] [associations]
            symbol:F1NH78 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
            Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
        Length = 1781

 Score = 290 (107.1 bits), Expect = 5.7e-24, P = 5.7e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:   984 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1043

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1044 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 1103

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  + + + +IL
Sbjct:  1104 VVRPGLG-SKSGSMTKQELDDIL 1125


>UNIPROTKB|E2R1M3 [details] [associations]
            symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
            Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
        Length = 1812

 Score = 290 (107.1 bits), Expect = 5.8e-24, P = 5.8e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:   915 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 974

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AKRK++L   
Sbjct:   975 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 1034

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  + + + +IL
Sbjct:  1035 VVRPGLG-SKSGSMTKQELDDIL 1056


>UNIPROTKB|F1MFF9 [details] [associations]
            symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
            Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
        Length = 1852

 Score = 290 (107.1 bits), Expect = 6.0e-24, P = 6.0e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:   998 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1057

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1058 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 1117

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  + + + +IL
Sbjct:  1118 VVRPGLG-SKSGSMTKQELDDIL 1139


>UNIPROTKB|F5GWX5 [details] [associations]
            symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
            IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
            ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
            Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
            Bgee:F5GWX5 Uniprot:F5GWX5
        Length = 1905

 Score = 290 (107.1 bits), Expect = 6.2e-24, P = 6.2e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1071 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1130

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AK+K++L   
Sbjct:  1131 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHL 1190

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1191 VVRPGLG-SKTGSMSKQELDDIL 1212


>UNIPROTKB|E2RHA0 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
            Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
            Uniprot:E2RHA0
        Length = 1912

 Score = 290 (107.1 bits), Expect = 6.2e-24, P = 6.2e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1078 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1137

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AK+K++L   
Sbjct:  1138 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHL 1197

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1198 VVRPGLG-SKTGSMSKQELDDIL 1219


>UNIPROTKB|Q14839 [details] [associations]
            symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0001103 "RNA polymerase II repressing
            transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
            Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
            HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
            EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
            RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
            PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
            PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
            IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
            DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
            Ensembl:ENST00000309577 Ensembl:ENST00000357008
            Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
            UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
            HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
            PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
            ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
            PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
            Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
        Length = 1912

 Score = 290 (107.1 bits), Expect = 6.2e-24, P = 6.2e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1078 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1137

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AK+K++L   
Sbjct:  1138 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHL 1197

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1198 VVRPGLG-SKTGSMSKQELDDIL 1219


>UNIPROTKB|F1SLR5 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
            RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
            GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
        Length = 1912

 Score = 290 (107.1 bits), Expect = 6.2e-24, P = 6.2e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1078 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1137

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AK+K++L   
Sbjct:  1138 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHL 1197

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1198 VVRPGLG-SKTGSMSKQELDDIL 1219


>MGI|MGI:1344380 [details] [associations]
            symbol:Chd4 "chromodomain helicase DNA binding protein 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001103 "RNA polymerase II repressing
            transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
            "cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
            "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
            "protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
            GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
            GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
            ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
            UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
            DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
            PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
            KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
            Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
            GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
        Length = 1915

 Score = 290 (107.1 bits), Expect = 6.3e-24, P = 6.3e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1071 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1130

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AK+K++L   
Sbjct:  1131 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHL 1190

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1191 VVRPGLG-SKTGSMSKQELDDIL 1212


>UNIPROTKB|E9PU01 [details] [associations]
            symbol:Chd4 "Protein Chd4" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
            ArrayExpress:E9PU01 Uniprot:E9PU01
        Length = 1915

 Score = 290 (107.1 bits), Expect = 6.3e-24, P = 6.3e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1071 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1130

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AK+K++L   
Sbjct:  1131 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHL 1190

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1191 VVRPGLG-SKTGSMSKQELDDIL 1212


>UNIPROTKB|J9NW81 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
            Uniprot:J9NW81
        Length = 1932

 Score = 290 (107.1 bits), Expect = 6.3e-24, P = 6.3e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1098 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1157

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AK+K++L   
Sbjct:  1158 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHL 1217

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1218 VVRPGLG-SKTGSMSKQELDDIL 1239


>UNIPROTKB|F1N3F6 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
            Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
        Length = 1934

 Score = 290 (107.1 bits), Expect = 6.3e-24, P = 6.3e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1100 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1159

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AK+K++L   
Sbjct:  1160 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHL 1219

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1220 VVRPGLG-SKTGSMSKQELDDIL 1241


>RGD|1582725 [details] [associations]
            symbol:Chd5 "chromodomain helicase DNA binding protein 5"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
            IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
            ArrayExpress:D4A5U0 Uniprot:D4A5U0
        Length = 1940

 Score = 290 (107.1 bits), Expect = 6.4e-24, P = 6.4e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1050 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1109

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1110 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 1169

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  + + + +IL
Sbjct:  1170 VVRPGLG-SKSGSMTKQELDDIL 1191


>UNIPROTKB|F1LM59 [details] [associations]
            symbol:Chd4 "Protein Chd4" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
            ArrayExpress:F1LM59 Uniprot:F1LM59
        Length = 1945

 Score = 290 (107.1 bits), Expect = 6.4e-24, P = 6.4e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1099 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1158

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AK+K++L   
Sbjct:  1159 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHL 1218

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  S + + +IL
Sbjct:  1219 VVRPGLG-SKTGSMSKQELDDIL 1240


>UNIPROTKB|Q8TDI0 [details] [associations]
            symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
            GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
            HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
            EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
            PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
            ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
            PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
            DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
            UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
            HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
            InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
            ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
            Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
            GermOnline:ENSG00000116254 Uniprot:Q8TDI0
        Length = 1954

 Score = 290 (107.1 bits), Expect = 6.4e-24, P = 6.4e-24
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLD+LE  L+  G  Y R+DG      RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1052 MLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 1111

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ + V IYR VT+ +V+E + ++AKRK++L   
Sbjct:  1112 ADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL 1171

Query:   120 VLESGVEVDNEGDTSDKTMGEIL 142
             V+  G+     G  + + + +IL
Sbjct:  1172 VVRPGLG-SKSGSMTKQELDDIL 1193


>UNIPROTKB|H0YJG4 [details] [associations]
            symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
            HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
        Length = 873

 Score = 285 (105.4 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 61/123 (49%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:   388 LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 447

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:   448 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 507

Query:   121 LES 123
             L+S
Sbjct:   508 LQS 510


>WB|WBGene00002169 [details] [associations]
            symbol:isw-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
            remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040027 "negative regulation of
            vulval development" evidence=IMP] [GO:0016246 "RNA interference"
            evidence=IMP] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0040026 "positive regulation of vulval development"
            evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
            RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
            STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
            KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
            GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
            KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
            Uniprot:P41877
        Length = 1009

 Score = 286 (105.7 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 67/149 (44%), Positives = 92/149 (61%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             MLD+LE         Y RLDGST   +R   ++A+N  D+  F  +L+TRAGG G+NL  
Sbjct:   463 MLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLAT 522

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD V+I+D D+NPQ D QA DR HRIGQ + V ++RL+T+ TVDE + E A+ KL LD  
Sbjct:   523 ADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNI 582

Query:   120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
             V++ G  +     T  K  G+++S I  G
Sbjct:   583 VIQQG-RMSEAQKTLGK--GDMISMIRHG 608


>POMBASE|SPBP35G2.10 [details] [associations]
            symbol:mit1 "SHREC complex subunit Mit1" species:4896
            "Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
            "nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
            heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
            "nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
            activity" evidence=IDA] [GO:0019787 "small conjugating protein
            ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
            silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
            heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
            evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
            [GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
            PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
            GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
            GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
            GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
            GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
            HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
            GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
            ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
            GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
            NextBio:20802445 Uniprot:Q9P793
        Length = 1418

 Score = 288 (106.4 bits), Expect = 6.9e-24, P = 6.9e-24
 Identities = 63/142 (44%), Positives = 90/142 (63%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTGA 60
             LDILE   +   + Y R DG++   ERQ+ +D+FN   S  +C LLSTRAGG G+NL  A
Sbjct:   900 LDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGINLASA 959

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+I D DFNP  D QA  R HR GQ + V ++ L T+ +V+E + + A++KL+LD  +
Sbjct:   960 DTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQNAQKKLVLDHLI 1019

Query:   121 LESGVEVDNEGDTSDKTMGEIL 142
             +ES   +D +   S+K +  IL
Sbjct:  1020 VES---LD-QNHNSEKDLESIL 1037


>UNIPROTKB|D3ZZZ1 [details] [associations]
            symbol:Ercc6 "Protein Ercc6" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1311509
            GO:GO:0005524 GO:GO:0008630 GO:GO:0005730 GO:GO:0006284
            GO:GO:0003677 GO:GO:0009636 GO:GO:0003682 GO:GO:0045494
            GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257
            GO:GO:0006283 GO:GO:0008094 GO:GO:0008023 GO:GO:0032786
            GO:GO:0006290 GO:GO:0007256 GO:GO:0000303 IPI:IPI00358023
            Ensembl:ENSRNOT00000038493 ArrayExpress:D3ZZZ1 Uniprot:D3ZZZ1
        Length = 1475

 Score = 288 (106.4 bits), Expect = 7.3e-24, P = 7.3e-24
 Identities = 58/122 (47%), Positives = 80/122 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             ML ILE  L     +Y ++DG+T +  RQ ++  +N DTSIF  LL+TR GG G+NLTGA
Sbjct:   861 MLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLTGA 920

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + V+I+D D+NP  D QA +R  RIGQ + VT+YRL+T GT++E +Y     K  L   V
Sbjct:   921 NRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRV 980

Query:   121 LE 122
             L+
Sbjct:   981 LK 982


>UNIPROTKB|B5DE69 [details] [associations]
            symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
            evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
            GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
            InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
            KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
            GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
            Uniprot:B5DE69
        Length = 2184

 Score = 290 (107.1 bits), Expect = 7.4e-24, P = 7.4e-24
 Identities = 68/143 (47%), Positives = 87/143 (60%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1106 LDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA 1165

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:  1166 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAV 1225

Query:   121 LESGVEVDNE--GDTSDKTMGEI 141
             L+S    DN   G     T  EI
Sbjct:  1226 LQSMSGRDNHLSGPIQQFTKKEI 1248


>UNIPROTKB|E1BYA8 [details] [associations]
            symbol:ERCC6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000303 "response to superoxide" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0006283 "transcription-coupled
            nucleotide-excision repair" evidence=IEA] [GO:0006284
            "base-excision repair" evidence=IEA] [GO:0006290 "pyrimidine dimer
            repair" evidence=IEA] [GO:0007256 "activation of JNKK activity"
            evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
            evidence=IEA] [GO:0008022 "protein C-terminus binding"
            evidence=IEA] [GO:0008023 "transcription elongation factor complex"
            evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
            response to DNA damage" evidence=IEA] [GO:0009636 "response to
            toxic substance" evidence=IEA] [GO:0010165 "response to X-ray"
            evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
            [GO:0010332 "response to gamma radiation" evidence=IEA] [GO:0032403
            "protein complex binding" evidence=IEA] [GO:0032786 "positive
            regulation of DNA-dependent transcription, elongation"
            evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
            evidence=IEA] [GO:0047485 "protein N-terminus binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
            GO:GO:0009636 GO:GO:0003682 GO:GO:0010332 GO:GO:0004386
            GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
            GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
            GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
            EMBL:AADN02027759 EMBL:AADN02027760 IPI:IPI00592927
            Ensembl:ENSGALT00000010107 Uniprot:E1BYA8
        Length = 1498

 Score = 288 (106.4 bits), Expect = 7.4e-24, P = 7.4e-24
 Identities = 59/122 (48%), Positives = 79/122 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             ML ILE  L     +Y R+DG+T +  RQ ++  +N D SIF  LL+TR GG G+NLTGA
Sbjct:   863 MLQILEVFLRDRNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLTGA 922

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             D V+I+D D+NP  D QA +R  RIGQ + VT+YRL+T GT++E +Y     K  L   V
Sbjct:   923 DRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRV 982

Query:   121 LE 122
             L+
Sbjct:   983 LK 984


>UNIPROTKB|Q8TD26 [details] [associations]
            symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
            [GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
            "chromatin binding" evidence=NAS] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
            EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
            EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
            EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
            RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
            PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
            MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
            PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
            Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
            KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
            GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
            HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
            HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
            OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
            EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
            ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
            Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
        Length = 2715

 Score = 289 (106.8 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
 Identities = 63/134 (47%), Positives = 87/134 (64%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAF-NNDTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L     TY R+DG  +   RQA +D F   D+  F  LL TRAGG G+NLT A
Sbjct:   812 LDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAA 871

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:   872 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 931

Query:   121 LESGVEVDNEGDTS 134
             L+   +++ +G T+
Sbjct:   932 LQ---DINRKGGTN 942

 Score = 34 (17.0 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query:   124 GVEVDNEGDTSDKTMGEILSSI 145
             GV  D E  T D T   I+S +
Sbjct:  1466 GVVYDQEKKTFDWTQFRIISRL 1487


>UNIPROTKB|F1NLW6 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
            EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
            ArrayExpress:F1NLW6 Uniprot:F1NLW6
        Length = 2005

 Score = 289 (106.8 bits), Expect = 8.5e-24, P = 8.5e-24
 Identities = 63/134 (47%), Positives = 87/134 (64%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAF-NNDTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L     TY R+DG  +   RQA +D F   D+  F  LL TRAGG G+NLT A
Sbjct:   609 LDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAA 668

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:   669 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 728

Query:   121 LESGVEVDNEGDTS 134
             L+   +++ +G T+
Sbjct:   729 LQ---DINRKGGTN 739


>UNIPROTKB|F1NLV5 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
            EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
            Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
        Length = 2007

 Score = 289 (106.8 bits), Expect = 8.5e-24, P = 8.5e-24
 Identities = 63/134 (47%), Positives = 87/134 (64%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAF-NNDTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L     TY R+DG  +   RQA +D F   D+  F  LL TRAGG G+NLT A
Sbjct:   609 LDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAA 668

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:   669 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 728

Query:   121 LESGVEVDNEGDTS 134
             L+   +++ +G T+
Sbjct:   729 LQ---DINRKGGTN 739


>RGD|1561046 [details] [associations]
            symbol:Smarca1 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 1"
            species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
            renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
            "chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
            evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
            "neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
            evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
            complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
            cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
            activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
            PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
            ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
        Length = 1034

 Score = 285 (105.4 bits), Expect = 9.0e-24, P = 9.0e-24
 Identities = 69/161 (42%), Positives = 97/161 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAI------------VDAFNN-DTSIFACLLS 47
             +LDILE      G  Y RLDG T   ER+ +            ++AFN  ++S F  +LS
Sbjct:   494 LLDILEDYCMWRGYEYCRLDGQTPHEERENLFLHKHNLFSTEAIEAFNAPNSSKFIFMLS 553

Query:    48 TRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY 107
             TRAGG G+NL  AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + 
Sbjct:   554 TRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIV 613

Query:   108 EIAKRKLILDAAVLESGVEVDNEGDTSDKTMGEILSSILMG 148
             E A+ KL LD+ V++ G  +D + +   K   E+L  I  G
Sbjct:   614 ERAEIKLRLDSIVIQQGRLIDQQSNKLAKE--EMLQMIRHG 652


>RGD|1311935 [details] [associations]
            symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
            evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
            "response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
            activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
            GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
            PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
            IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
            ArrayExpress:D4ACG6 Uniprot:D4ACG6
        Length = 903

 Score = 284 (105.0 bits), Expect = 9.2e-24, P = 9.2e-24
 Identities = 67/145 (46%), Positives = 84/145 (57%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL+  +D  G +Y R+DGS +  ER   +  F     IF  LLSTRAGG G+NLT A
Sbjct:   369 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGKQP-IFVFLLSTRAGGVGMNLTAA 427

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQ + V + RL+ + TV+E VY  A  KL L   V
Sbjct:   428 DTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMV 487

Query:   121 LESG---VEVDNEGDTSDKTMGEIL 142
             +E G   +        +D  + EIL
Sbjct:   488 IEGGHFTLGAQKPAAEADLQLSEIL 512


>UNIPROTKB|F1PTH3 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
            EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
            Uniprot:F1PTH3
        Length = 2715

 Score = 290 (107.1 bits), Expect = 9.5e-24, P = 9.5e-24
 Identities = 63/134 (47%), Positives = 87/134 (64%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAF-NNDTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L     TY R+DG  +   RQA +D F   D+  F  LL TRAGG G+NLT A
Sbjct:   812 LDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAA 871

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:   872 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 931

Query:   121 LESGVEVDNEGDTS 134
             L+   +++ +G T+
Sbjct:   932 LQ---DINRKGSTN 942


>UNIPROTKB|J9P0F6 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
            EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
            Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
            Uniprot:J9P0F6
        Length = 2715

 Score = 290 (107.1 bits), Expect = 9.5e-24, P = 9.5e-24
 Identities = 63/134 (47%), Positives = 87/134 (64%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAF-NNDTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L     TY R+DG  +   RQA +D F   D+  F  LL TRAGG G+NLT A
Sbjct:   812 LDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAA 871

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:   872 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 931

Query:   121 LESGVEVDNEGDTS 134
             L+   +++ +G T+
Sbjct:   932 LQ---DINRKGSTN 942


>UNIPROTKB|F1N734 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
            EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
            EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
            ArrayExpress:F1N734 Uniprot:F1N734
        Length = 2720

 Score = 290 (107.1 bits), Expect = 9.6e-24, P = 9.6e-24
 Identities = 63/134 (47%), Positives = 87/134 (64%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAF-NNDTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L     TY R+DG  +   RQA +D F   D+  F  LL TRAGG G+NLT A
Sbjct:   811 LDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAA 870

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:   871 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 930

Query:   121 LESGVEVDNEGDTS 134
             L+   +++ +G T+
Sbjct:   931 LQ---DINRKGSTN 941


>UNIPROTKB|H3BTW3 [details] [associations]
            symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
            EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
            Uniprot:H3BTW3
        Length = 1099

 Score = 285 (105.4 bits), Expect = 9.9e-24, P = 9.9e-24
 Identities = 68/143 (47%), Positives = 87/143 (60%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:   737 LDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 796

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ + V +YRLVT+ + +  +++ A  KL LD AV
Sbjct:   797 DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAV 856

Query:   121 LES--GVEVDNEGDTSDKTMGEI 141
             L+S  G E  N G     +  EI
Sbjct:   857 LQSMSGRE-SNVGGIQQLSKKEI 878


>DICTYBASE|DDB_G0284171 [details] [associations]
            symbol:DDB_G0284171 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
            KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
            STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
            KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
            ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
        Length = 1917

 Score = 288 (106.4 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 63/124 (50%), Positives = 84/124 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS    +R   +D FN  D+  F  LLST+AGG G+NL+ 
Sbjct:  1093 MLDILADYLKGRSFQFQRLDGSMSREKRSQAMDRFNAVDSPDFCFLLSTKAGGLGINLST 1152

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NPQ D QAE R HRIGQ   V IYRLV+K +V+E++ E AK+K++LD  
Sbjct:  1153 ADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVSKSSVEEDILERAKQKMVLDHL 1212

Query:   120 VLES 123
             V+++
Sbjct:  1213 VIQT 1216


>UNIPROTKB|E1BS47 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
            IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
            Uniprot:E1BS47
        Length = 1326

 Score = 286 (105.7 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:   505 LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA 564

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:   565 DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 624

Query:   121 LES 123
             L+S
Sbjct:   625 LQS 627


>UNIPROTKB|H3BU65 [details] [associations]
            symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0004386 EMBL:AC013394 HGNC:HGNC:1917
            ChiTaRS:CHD2 Ensembl:ENST00000557116 Bgee:H3BU65 Uniprot:H3BU65
        Length = 113

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 59/98 (60%), Positives = 70/98 (71%)

Query:    18 RLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTGADTVVIHDMDFNPQIDR 76
             RLDGS +   R+  +D FN D S   C LLSTRAGG G+NL  ADTVVI D D+NPQ D 
Sbjct:    16 RLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDL 75

Query:    77 QAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL 114
             QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K+
Sbjct:    76 QAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKM 113


>UNIPROTKB|Q86WJ1 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
            evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
            damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
            catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
            GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
            CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
            EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
            EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
            EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
            IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
            RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
            RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
            ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
            STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
            PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
            Ensembl:ENST00000431239 Ensembl:ENST00000579763
            Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
            KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
            UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
            H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
            MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
            OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
            NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
            Genevestigator:Q86WJ1 Uniprot:Q86WJ1
        Length = 897

 Score = 283 (104.7 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 66/145 (45%), Positives = 84/145 (57%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL+  +D  G +Y R+DGS +  ER   +  F     IF  LLSTRAGG G+NLT A
Sbjct:   375 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAA 433

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQ + V + RL+ + TV+E VY  A  KL L   +
Sbjct:   434 DTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMI 493

Query:   121 LESG---VEVDNEGDTSDKTMGEIL 142
             +E G   +        +D  + EIL
Sbjct:   494 IEGGHFTLGAQKPAADADLQLSEIL 518


>UNIPROTKB|K7GMM0 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
            GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
            Uniprot:K7GMM0
        Length = 1057

 Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 69/161 (42%), Positives = 96/161 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQ------------AIVDAFN-NDTSIFACLLS 47
             +LDILE      G  Y RLDG T   ER+              ++AFN  ++S F  +LS
Sbjct:   517 LLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLS 576

Query:    48 TRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY 107
             TRAGG G+NL  AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + 
Sbjct:   577 TRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIV 636

Query:   108 EIAKRKLILDAAVLESGVEVDNEGDTSDKTMGEILSSILMG 148
             E A+ KL LD+ V++ G  +D + +   K   E+L  I  G
Sbjct:   637 ERAEIKLRLDSIVIQQGRLIDQQSNKMAKE--EMLQMIRHG 675


>UNIPROTKB|F1RTI9 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
            activity" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
            GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
            OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
        Length = 1073

 Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 69/161 (42%), Positives = 96/161 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQ------------AIVDAFN-NDTSIFACLLS 47
             +LDILE      G  Y RLDG T   ER+              ++AFN  ++S F  +LS
Sbjct:   517 LLDILEDYCMWRGYEYCRLDGQTPHEERENGFLQIYFRRRREAIEAFNVPNSSRFIFMLS 576

Query:    48 TRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY 107
             TRAGG G+NL  AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + 
Sbjct:   577 TRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIV 636

Query:   108 EIAKRKLILDAAVLESGVEVDNEGDTSDKTMGEILSSILMG 148
             E A+ KL LD+ V++ G  +D + +   K   E+L  I  G
Sbjct:   637 ERAEIKLRLDSIVIQQGRLIDQQSNKMAKE--EMLQMIRHG 675


>UNIPROTKB|K7GLQ2 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
            RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
            Uniprot:K7GLQ2
        Length = 1073

 Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 69/161 (42%), Positives = 96/161 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQ------------AIVDAFN-NDTSIFACLLS 47
             +LDILE      G  Y RLDG T   ER+              ++AFN  ++S F  +LS
Sbjct:   517 LLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLS 576

Query:    48 TRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY 107
             TRAGG G+NL  AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + 
Sbjct:   577 TRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIV 636

Query:   108 EIAKRKLILDAAVLESGVEVDNEGDTSDKTMGEILSSILMG 148
             E A+ KL LD+ V++ G  +D + +   K   E+L  I  G
Sbjct:   637 ERAEIKLRLDSIVIQQGRLIDQQSNKMAKE--EMLQMIRHG 675


>UNIPROTKB|F6TQG2 [details] [associations]
            symbol:SMARCA1 "Probable global transcription activator
            SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
            EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
            ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
            Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
            Uniprot:F6TQG2
        Length = 1005

 Score = 283 (104.7 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 69/161 (42%), Positives = 96/161 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQ------------AIVDAFNN-DTSIFACLLS 47
             +LDILE      G  Y RLDG T   ER+              ++AFN  ++S F  +LS
Sbjct:   493 LLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLS 552

Query:    48 TRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY 107
             TRAGG G+NL  AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + 
Sbjct:   553 TRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIV 612

Query:   108 EIAKRKLILDAAVLESGVEVDNEGDTSDKTMGEILSSILMG 148
             E A+ KL LD+ V++ G  +D + +   K   E+L  I  G
Sbjct:   613 ERAEIKLRLDSIVIQQGRLIDQQSNKLAKE--EMLQMIRHG 651


>UNIPROTKB|P28370 [details] [associations]
            symbol:SMARCA1 "Probable global transcription activator
            SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
            [GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
            "nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
            "CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
            evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
            GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
            EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
            IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
            RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
            ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
            MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
            PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
            Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
            KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
            GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
            neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
            InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
            GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
            CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
            Uniprot:P28370
        Length = 1054

 Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 69/161 (42%), Positives = 96/161 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQ------------AIVDAFNN-DTSIFACLLS 47
             +LDILE      G  Y RLDG T   ER+              ++AFN  ++S F  +LS
Sbjct:   514 LLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLS 573

Query:    48 TRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY 107
             TRAGG G+NL  AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T  TV+E + 
Sbjct:   574 TRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIV 633

Query:   108 EIAKRKLILDAAVLESGVEVDNEGDTSDKTMGEILSSILMG 148
             E A+ KL LD+ V++ G  +D + +   K   E+L  I  G
Sbjct:   634 ERAEIKLRLDSIVIQQGRLIDQQSNKLAKE--EMLQMIRHG 672


>CGD|CAL0000882 [details] [associations]
            symbol:orf19.607 species:5476 "Candida albicans" [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006283
            "transcription-coupled nucleotide-excision repair" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0000882 GO:GO:0005524
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AACQ01000108 HOGENOM:HOG000170952 KO:K10841
            RefSeq:XP_714234.1 ProteinModelPortal:Q59XB8 STRING:Q59XB8
            GeneID:3644142 KEGG:cal:CaO19.607 Uniprot:Q59XB8
        Length = 1055

 Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 60/128 (46%), Positives = 83/128 (64%)

Query:     1 MLDILEW---TLDVIG---VTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQG 54
             MLDILE     L +I      Y R+DGST +++RQ +VDAFN D  +   LL+T+ GG G
Sbjct:   641 MLDILEKFVANLSLINGGDFNYLRMDGSTPISKRQMLVDAFNQDPDMHVFLLTTKVGGLG 700

Query:    55 LNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKL 114
             +NLTGAD V+I+D D+NP  D QA +R  R+GQ R +TIYRL+T G+++E +Y     K 
Sbjct:   701 VNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKT 760

Query:   115 ILDAAVLE 122
              L   +L+
Sbjct:   761 FLTNKILK 768


>UNIPROTKB|F1RN66 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
            Uniprot:F1RN66
        Length = 1794

 Score = 286 (105.7 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 67/134 (50%), Positives = 86/134 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   810 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 869

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HR G    V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   870 ADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHL 929

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   930 VIQ---RMDTTGKT 940


>UNIPROTKB|I3L6N4 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
            Uniprot:I3L6N4
        Length = 1798

 Score = 286 (105.7 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 67/134 (50%), Positives = 86/134 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   810 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 869

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HR G    V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   870 ADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHL 929

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   930 VIQ---RMDTTGKT 940


>UNIPROTKB|I3LIS2 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0035064 "methylated histone residue binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
            EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
        Length = 1799

 Score = 286 (105.7 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 67/134 (50%), Positives = 86/134 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLDIL   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   811 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 870

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTVVI D D+NPQ D QA+ R HR G    V IYRLVTKG+V+E++ E AK+K++LD  
Sbjct:   871 ADTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHL 930

Query:   120 VLESGVEVDNEGDT 133
             V++    +D  G T
Sbjct:   931 VIQ---RMDTTGKT 941


>UNIPROTKB|F1NSG3 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
            nerve development" evidence=IEA] [GO:0030217 "T cell
            differentiation" evidence=IEA] [GO:0030540 "female genitalia
            development" evidence=IEA] [GO:0035116 "embryonic hindlimb
            morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
            multicellular organism growth" evidence=IEA] [GO:0043584 "nose
            development" evidence=IEA] [GO:0048752 "semicircular canal
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0060041 "retina development
            in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
            hormone secretion" evidence=IEA] [GO:0060324 "face development"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
            "sensory perception of sound" evidence=IEA] [GO:0007628 "adult
            walking behavior" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
            OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
            EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
            ArrayExpress:F1NSG3 Uniprot:F1NSG3
        Length = 2248

 Score = 286 (105.7 bits), Expect = 2.0e-23, P = 2.0e-23
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:   557 LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA 616

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:   617 DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 676

Query:   121 LES 123
             L+S
Sbjct:   677 LQS 679


>SGD|S000000449 [details] [associations]
            symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
            chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
            "termination of RNA polymerase II transcription" evidence=IGI]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
            binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
            binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
            transcription" evidence=IGI] [GO:0070870 "heterochromatin
            maintenance involved in chromatin silencing" evidence=IGI;IMP]
            [GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
            transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
            remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0001178 "regulation of transcriptional start site
            selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
            evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
            GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
            GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
            GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
            PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
            EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
            SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
            STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
            GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
            OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
            Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
        Length = 1129

 Score = 282 (104.3 bits), Expect = 2.2e-23, P = 2.2e-23
 Identities = 64/146 (43%), Positives = 89/146 (60%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
             +LDILE         Y R+DGST   +R   +D +N  D+  F  LL+TRAGG G+NLT 
Sbjct:   530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 589

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             AD VV++D D+NPQ D QA DR HRIGQ + V ++RLVT  +V+E + E A +KL LD  
Sbjct:   590 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 649

Query:   120 VLESG----VEVDNEGDTSDKTMGEI 141
             V++       + +N+ D+ D  +  I
Sbjct:   650 VIQQNRTSLKKKENKADSKDALLSMI 675


>UNIPROTKB|E2QUR1 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
            Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
        Length = 2200

 Score = 285 (105.4 bits), Expect = 2.5e-23, P = 2.5e-23
 Identities = 61/123 (49%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:   779 LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 838

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:   839 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 898

Query:   121 LES 123
             L+S
Sbjct:   899 LQS 901


>UNIPROTKB|E1BPM4 [details] [associations]
            symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
            "regulation of growth hormone secretion" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0050890 "cognition"
            evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
            [GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
            [GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
            regulation of multicellular organism growth" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0030540 "female genitalia development" evidence=IEA]
            [GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
            "cranial nerve development" evidence=IEA] [GO:0008015 "blood
            circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
            evidence=IEA] [GO:0007605 "sensory perception of sound"
            evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
            utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
            system development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
            GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
            GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
            GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
            GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
            InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
            GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
            EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
            Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
        Length = 2940

 Score = 286 (105.7 bits), Expect = 2.8e-23, P = 2.8e-23
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1269 LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1328

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:  1329 DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 1388

Query:   121 LES 123
             L+S
Sbjct:  1389 LQS 1391


>ZFIN|ZDB-GENE-030131-497 [details] [associations]
            symbol:chd9 "chromodomain helicase DNA binding
            protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
            activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
            EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
            Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
        Length = 2948

 Score = 286 (105.7 bits), Expect = 2.8e-23, P = 2.8e-23
 Identities = 63/129 (48%), Positives = 82/129 (63%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1264 LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1323

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ + V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:  1324 DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAV 1383

Query:   121 LESGVEVDN 129
             L+S    DN
Sbjct:  1384 LQSMSGRDN 1392


>RGD|1311921 [details] [associations]
            symbol:Chd7 "chromodomain helicase DNA binding protein 7"
            species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
            development" evidence=IEA;ISO] [GO:0001568 "blood vessel
            development" evidence=ISO] [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
            evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
            nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
            heart development" evidence=IEA;ISO] [GO:0007605 "sensory
            perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
            behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
            evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
            [GO:0021545 "cranial nerve development" evidence=IEA;ISO]
            [GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
            "female genitalia development" evidence=IEA;ISO] [GO:0035116
            "embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
            "positive regulation of multicellular organism growth"
            evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
            [GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
            "camera-type eye development" evidence=ISO] [GO:0043584 "nose
            development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
            morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
            development" evidence=ISO] [GO:0048844 "artery morphogenesis"
            evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
            [GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
            "retina development in camera-type eye" evidence=IEA;ISO]
            [GO:0060123 "regulation of growth hormone secretion"
            evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
            [GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
            GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
            GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
            GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
            GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
            GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
            CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
            GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
            RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
            GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
        Length = 2985

 Score = 286 (105.7 bits), Expect = 2.8e-23, P = 2.8e-23
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1308 LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1367

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:  1368 DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 1427

Query:   121 LES 123
             L+S
Sbjct:  1428 LQS 1430


>MGI|MGI:2444748 [details] [associations]
            symbol:Chd7 "chromodomain helicase DNA binding protein 7"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
            [GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
            [GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
            nervous system development" evidence=ISO] [GO:0007512 "adult heart
            development" evidence=IMP] [GO:0007605 "sensory perception of
            sound" evidence=IMP] [GO:0007626 "locomotory behavior"
            evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
            [GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
            development" evidence=ISO] [GO:0030217 "T cell differentiation"
            evidence=ISO] [GO:0030540 "female genitalia development"
            evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=IMP] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
            evidence=IMP] [GO:0042472 "inner ear morphogenesis"
            evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
            evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
            [GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
            [GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
            "artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
            evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
            [GO:0060041 "retina development in camera-type eye" evidence=ISO]
            [GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
            [GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
            development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
            GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
            GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
            GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
            GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
            GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
            CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
            OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
            EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
            EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
            IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
            ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
            PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
            Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
            Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
            UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
            InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
            Genevestigator:A2AJK6 Uniprot:A2AJK6
        Length = 2986

 Score = 286 (105.7 bits), Expect = 2.8e-23, P = 2.8e-23
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1309 LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1368

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:  1369 DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 1428

Query:   121 LES 123
             L+S
Sbjct:  1429 LQS 1431


>UNIPROTKB|J9NZH0 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
            Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
        Length = 850

 Score = 279 (103.3 bits), Expect = 2.8e-23, P = 2.8e-23
 Identities = 58/134 (43%), Positives = 86/134 (64%)

Query:    16 YRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQI 74
             YR + G      ++  ++AFN  ++S F  +LSTRAGG G+NL  AD V+++D D+NPQ+
Sbjct:   321 YRSISGQYLFVYKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 380

Query:    75 DRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAVLESGVEVDNEGDTS 134
             D QA DR HRIGQ +PV ++RL+T  TV+E + E A+ KL LD+ V++ G  +D + +  
Sbjct:   381 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 440

Query:   135 DKTMGEILSSILMG 148
              K   E+L  I  G
Sbjct:   441 AKE--EMLQMIRHG 452


>UNIPROTKB|F1PWD8 [details] [associations]
            symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
            EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
            GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
        Length = 2994

 Score = 286 (105.7 bits), Expect = 2.8e-23, P = 2.8e-23
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1318 LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1377

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:  1378 DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 1437

Query:   121 LES 123
             L+S
Sbjct:  1438 LQS 1440


>UNIPROTKB|Q9P2D1 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
            "sensory perception of sound" evidence=IEA] [GO:0007628 "adult
            walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
            evidence=IEA] [GO:0030540 "female genitalia development"
            evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=IEA] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IEA] [GO:0048752 "semicircular canal
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
            development" evidence=IMP] [GO:0003007 "heart morphogenesis"
            evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
            [GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
            development" evidence=IMP] [GO:0060021 "palate development"
            evidence=IMP] [GO:0060041 "retina development in camera-type eye"
            evidence=IMP] [GO:0001501 "skeletal system development"
            evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
            "central nervous system development" evidence=IMP] [GO:0021545
            "cranial nerve development" evidence=IMP] [GO:0060123 "regulation
            of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
            binding" evidence=TAS] [GO:0030217 "T cell differentiation"
            evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0060324 "face development" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
            GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
            GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
            GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
            GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
            GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
            InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
            KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
            EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
            EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
            EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
            UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
            PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
            SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
            PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
            Ensembl:ENST00000307121 Ensembl:ENST00000423902
            Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
            GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
            MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
            Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
            OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
            ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
            Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
            GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
        Length = 2997

 Score = 286 (105.7 bits), Expect = 2.8e-23, P = 2.8e-23
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1319 LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1378

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:  1379 DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 1438

Query:   121 LES 123
             L+S
Sbjct:  1439 LQS 1441


>UNIPROTKB|Q06A37 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
            RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
            SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
            HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
            NextBio:20823957 Uniprot:Q06A37
        Length = 3011

 Score = 286 (105.7 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1320 LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA 1379

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:  1380 DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 1439

Query:   121 LES 123
             L+S
Sbjct:  1440 LQS 1442


>TAIR|locus:2173644 [details] [associations]
            symbol:CHR1 "chromatin remodeling 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
            "regulation of gene expression by genetic imprinting" evidence=IMP]
            [GO:0044030 "regulation of DNA methylation" evidence=IMP]
            [GO:0051574 "positive regulation of histone H3-K9 methylation"
            evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
            histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
            evidence=IMP] [GO:0009294 "DNA mediated transformation"
            evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
            evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
            [GO:0006346 "methylation-dependent chromatin silencing"
            evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
            [GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
            phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
            small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
            evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
            GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
            EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
            GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
            EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
            RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
            SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
            EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
            TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
            PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
            GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
        Length = 764

 Score = 278 (102.9 bits), Expect = 3.0e-23, P = 3.0e-23
 Identities = 57/125 (45%), Positives = 84/125 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             +LDI+++     G    R+DGS ++ ER+  +  F+++ S  +  LLSTRAGG G+NLT 
Sbjct:   552 LLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTA 611

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADT +++D D+NPQ+D QA DRCHRIGQT+PV +YRL T  +++  V + A  KL L+  
Sbjct:   612 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHV 671

Query:   120 VLESG 124
             V+  G
Sbjct:   672 VIGQG 676


>UNIPROTKB|F1MLB2 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IEA]
            [GO:0045945 "positive regulation of transcription from RNA
            polymerase III promoter" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
            residue binding" evidence=IEA] [GO:0030178 "negative regulation of
            Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
            "beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
            OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
            EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
            Uniprot:F1MLB2
        Length = 2537

 Score = 285 (105.4 bits), Expect = 3.0e-23, P = 3.0e-23
 Identities = 61/123 (49%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1116 LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1175

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:  1176 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 1235

Query:   121 LES 123
             L+S
Sbjct:  1236 LQS 1238


>ZFIN|ZDB-GENE-070912-179 [details] [associations]
            symbol:chd7 "chromodomain helicase DNA binding
            protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
            activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007368 "determination of left/right symmetry"
            evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
            "retina development in camera-type eye" evidence=IMP] [GO:0021602
            "cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
            looping" evidence=IMP] [GO:0030282 "bone mineralization"
            evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
            [GO:0014029 "neural crest formation" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
            GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
            GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
            Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
            Uniprot:F1QGL1
        Length = 3140

 Score = 286 (105.7 bits), Expect = 3.0e-23, P = 3.0e-23
 Identities = 62/123 (50%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1371 LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA 1430

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V IYRL+T+ + +  +++ A  KL LD AV
Sbjct:  1431 DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV 1490

Query:   121 LES 123
             L+S
Sbjct:  1491 LQS 1493


>UNIPROTKB|F1S8J5 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IEA]
            [GO:0045945 "positive regulation of transcription from RNA
            polymerase III promoter" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
            residue binding" evidence=IEA] [GO:0030178 "negative regulation of
            Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
            "beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
            OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
            ArrayExpress:F1S8J5 Uniprot:F1S8J5
        Length = 2569

 Score = 285 (105.4 bits), Expect = 3.0e-23, P = 3.0e-23
 Identities = 61/123 (49%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1163 LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1222

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:  1223 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 1282

Query:   121 LES 123
             L+S
Sbjct:  1283 LQS 1285


>UNIPROTKB|Q9HCK8 [details] [associations]
            symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
            species:9606 "Homo sapiens" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
            domain binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IDA]
            [GO:0030178 "negative regulation of Wnt receptor signaling pathway"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
            "methylated histone residue binding" evidence=IDA] [GO:0045945
            "positive regulation of transcription from RNA polymerase III
            promoter" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
            [GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
            binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
            [GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
            unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
            GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
            GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
            GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
            PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
            EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
            EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
            EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
            IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
            RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
            PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
            STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
            PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
            Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
            UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
            HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
            KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
            NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
            Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
        Length = 2581

 Score = 285 (105.4 bits), Expect = 3.1e-23, P = 3.1e-23
 Identities = 61/123 (49%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1162 LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1221

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:  1222 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 1281

Query:   121 LES 123
             L+S
Sbjct:  1282 LQS 1284


>RGD|620696 [details] [associations]
            symbol:Chd8 "chromodomain helicase DNA binding protein 8"
            species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
            evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
            [GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
            "negative regulation of Wnt receptor signaling pathway"
            evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
            [GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
            [GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
            "negative regulation of apoptotic process" evidence=ISO;ISS]
            [GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
            transcription from RNA polymerase III promoter" evidence=ISO;ISS]
            [GO:0060070 "canonical Wnt receptor signaling pathway"
            evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
            evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
            GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
            GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
            HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
            EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
            UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
            Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
            UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
        Length = 2581

 Score = 285 (105.4 bits), Expect = 3.1e-23, P = 3.1e-23
 Identities = 61/123 (49%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1162 LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1221

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:  1222 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 1281

Query:   121 LES 123
             L+S
Sbjct:  1282 LQS 1284


>MGI|MGI:1915022 [details] [associations]
            symbol:Chd8 "chromodomain helicase DNA binding protein 8"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008013
            "beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
            ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
            pathway" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
            signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
            evidence=ISO] [GO:0035064 "methylated histone residue binding"
            evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0045945 "positive regulation of transcription
            from RNA polymerase III promoter" evidence=ISO] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=ISO]
            [GO:0070016 "armadillo repeat domain binding" evidence=ISO]
            [GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
            GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
            HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
            HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
            OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
            IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
            UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
            IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
            PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
            UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
            NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
        Length = 2582

 Score = 285 (105.4 bits), Expect = 3.1e-23, P = 3.1e-23
 Identities = 61/123 (49%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1164 LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1223

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:  1224 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 1283

Query:   121 LES 123
             L+S
Sbjct:  1284 LQS 1286


>UNIPROTKB|E2QUS7 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
            Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
        Length = 2586

 Score = 285 (105.4 bits), Expect = 3.1e-23, P = 3.1e-23
 Identities = 61/123 (49%), Positives = 81/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1163 LDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1222

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  +++ A  KL LD AV
Sbjct:  1223 DTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAV 1282

Query:   121 LES 123
             L+S
Sbjct:  1283 LQS 1285


>FB|FBgn0023395 [details] [associations]
            symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
            [GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
            InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
            RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
            DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
            EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
            UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
            OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
            NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
        Length = 892

 Score = 279 (103.3 bits), Expect = 3.1e-23, P = 3.1e-23
 Identities = 60/126 (47%), Positives = 81/126 (64%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             ML++LE  L+  G  Y R+DGS +   RQ  +D FN+  S  F  LLSTRAGG G+NL  
Sbjct:   614 MLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLAT 673

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA  R HR+GQ + V IYR VT  +V+E + ++AK K++L   
Sbjct:   674 ADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHL 733

Query:   120 VLESGV 125
             V+  G+
Sbjct:   734 VVRPGM 739


>SGD|S000006003 [details] [associations]
            symbol:MOT1 "Essential protein involved in regulation of
            transcription" species:4932 "Saccharomyces cerevisiae" [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005739
            "mitochondrion" evidence=IEA;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
            evidence=IPI] [GO:0000228 "nuclear chromosome" evidence=IDA]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA;IDA] [GO:0045898 "regulation of RNA
            polymerase II transcriptional preinitiation complex assembly"
            evidence=IMP] [GO:0042790 "transcription of nuclear large rRNA
            transcript from RNA polymerase I promoter" evidence=IMP;IDA]
            [GO:0006364 "rRNA processing" evidence=IMP] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SGD:S000006003 GO:GO:0005739 GO:GO:0005524
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            PROSITE:PS50077 GO:GO:0003677 GO:GO:0016887 EMBL:BK006949
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:U41849 GO:GO:0000228 GO:GO:0006364
            HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
            Pfam:PF12054 GO:GO:0042790 GO:GO:0045898 OrthoDB:EOG44XNQZ
            EMBL:M83224 PIR:S22775 RefSeq:NP_015243.1 ProteinModelPortal:P32333
            SMR:P32333 DIP:DIP-2418N IntAct:P32333 MINT:MINT-623118
            STRING:P32333 PaxDb:P32333 PeptideAtlas:P32333 PRIDE:P32333
            EnsemblFungi:YPL082C GeneID:856023 KEGG:sce:YPL082C CYGD:YPL082c
            GeneTree:ENSGT00630000089754 NextBio:980935 Genevestigator:P32333
            GermOnline:YPL082C Uniprot:P32333
        Length = 1867

 Score = 283 (104.7 bits), Expect = 3.4e-23, P = 3.4e-23
 Identities = 60/124 (48%), Positives = 82/124 (66%)

Query:     1 MLDILEWTLD---VIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLD++E  L    +  VTY RLDGS    +RQ +V  FN D SI   LL+T+ GG GLNL
Sbjct:  1658 MLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNL 1717

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
             TGADTV+  + D+NP  D QA DR HRIGQ + V +YR++TKGT++E +  + K K+ + 
Sbjct:  1718 TGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIA 1777

Query:   118 AAVL 121
             + V+
Sbjct:  1778 STVV 1781


>CGD|CAL0002614 [details] [associations]
            symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
            "nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
            transcriptional preinitiation complex assembly" evidence=IEA]
            [GO:0042790 "transcription of nuclear large rRNA transcript from
            RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
            EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
            ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
            GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
            Uniprot:Q59TC9
        Length = 1915

 Score = 283 (104.7 bits), Expect = 3.5e-23, P = 3.5e-23
 Identities = 60/124 (48%), Positives = 83/124 (66%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VT+ RLDGST   +RQ+IV  FN D SI   LL+T+ GG GLNL
Sbjct:  1698 MLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDVLLLTTKVGGLGLNL 1757

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
             TGADTV+  + D+NP  D QA DR HR+GQ + V +YRL+TK T++E +  + K K+ + 
Sbjct:  1758 TGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEKIMGLQKFKMNIA 1817

Query:   118 AAVL 121
             + ++
Sbjct:  1818 STIV 1821


>UNIPROTKB|Q3L8U1 [details] [associations]
            symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
            "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
            process" evidence=TAS] [GO:0044281 "small molecule metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
            GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
            EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
            EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
            IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
            UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
            IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
            PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
            Ensembl:ENST00000447540 Ensembl:ENST00000564845
            Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
            UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
            HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
            InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
            NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
            Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
        Length = 2897

 Score = 285 (105.4 bits), Expect = 3.5e-23, P = 3.5e-23
 Identities = 68/143 (47%), Positives = 87/143 (60%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1211 LDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1270

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ + V +YRLVT+ + +  +++ A  KL LD AV
Sbjct:  1271 DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAV 1330

Query:   121 LES--GVEVDNEGDTSDKTMGEI 141
             L+S  G E  N G     +  EI
Sbjct:  1331 LQSMSGRE-SNVGGIQQLSKKEI 1352


>UNIPROTKB|E1BDZ3 [details] [associations]
            symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
            IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
        Length = 2900

 Score = 285 (105.4 bits), Expect = 3.5e-23, P = 3.5e-23
 Identities = 68/143 (47%), Positives = 87/143 (60%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1212 LDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1271

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ + V +YRLVT+ + +  +++ A  KL LD AV
Sbjct:  1272 DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAV 1331

Query:   121 LES--GVEVDNEGDTSDKTMGEI 141
             L+S  G E  N G     +  EI
Sbjct:  1332 LQSMSGRE-SNVGGIQQLSKKEI 1353


>UNIPROTKB|E2RDK8 [details] [associations]
            symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
            EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
            Uniprot:E2RDK8
        Length = 2902

 Score = 285 (105.4 bits), Expect = 3.5e-23, P = 3.5e-23
 Identities = 68/143 (47%), Positives = 87/143 (60%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1213 LDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1272

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ + V +YRLVT+ + +  +++ A  KL LD AV
Sbjct:  1273 DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAV 1332

Query:   121 LES--GVEVDNEGDTSDKTMGEI 141
             L+S  G E  N G     +  EI
Sbjct:  1333 LQSMSGRE-SNVGGIQQLSKKEI 1354


>POMBASE|SPBC1826.01c [details] [associations]
            symbol:mot1 "TATA-binding protein associated factor
            Mot1 (predicted)" species:4896 "Schizosaccharomyces pombe"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IC] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0017025 "TBP-class
            protein binding" evidence=ISO] [GO:0043234 "protein complex"
            evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 PomBase:SPBC1826.01c GO:GO:0005524 GO:GO:0005634
            GO:GO:0043234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            PROSITE:PS50077 GO:GO:0006355 GO:GO:0003677 EMBL:CU329671
            GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006366 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
            Pfam:PF12054 GO:GO:0017025 EMBL:AB027981 PIR:T39739
            RefSeq:NP_596080.2 ProteinModelPortal:O43065 STRING:O43065
            EnsemblFungi:SPBC1826.01c.1 GeneID:2539633 KEGG:spo:SPBC1826.01c
            OrthoDB:EOG44XNQZ NextBio:20800788 Uniprot:O43065
        Length = 1953

 Score = 283 (104.7 bits), Expect = 3.6e-23, P = 3.6e-23
 Identities = 58/119 (48%), Positives = 80/119 (67%)

Query:     3 DILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADT 62
             D+L+ T+    VTY RLDGS + T+RQ  V  FNND SI   LL+T  GG GLNLTGADT
Sbjct:  1755 DLLQATMP--DVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLLTTHVGGLGLNLTGADT 1812

Query:    63 VVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAVL 121
             V+  + D+NP  D QA DR HRIGQ + V +YRL+T+G ++E +  + + K+ + + V+
Sbjct:  1813 VIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVV 1871


>FB|FBgn0262519 [details] [associations]
            symbol:Mi-2 species:7227 "Drosophila melanogaster"
            [GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
            "nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
            evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
            [GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
            helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
            evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
            organ development" evidence=IMP] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
            evidence=IDA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0070615
            "nucleosome-dependent ATPase activity" evidence=IDA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
            GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
            PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
            RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
            SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
            STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
            EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
            CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
            ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
            GermOnline:CG8103 Uniprot:O97159
        Length = 1982

 Score = 283 (104.7 bits), Expect = 3.6e-23, P = 3.6e-23
 Identities = 63/126 (50%), Positives = 79/126 (62%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNND-TSIFACLLSTRAGGQGLNLTG 59
             MLDILE  L+     Y R+DG    T RQ  +D FN      F  LLSTRAGG G+NL  
Sbjct:  1080 MLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLAT 1139

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HRIGQ   V IYR VT+ +V+E V ++AKRK++L   
Sbjct:  1140 ADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHL 1199

Query:   120 VLESGV 125
             V+  G+
Sbjct:  1200 VVRPGM 1205


>DICTYBASE|DDB_G0286219 [details] [associations]
            symbol:DDB_G0286219 "putative TBP-associated factor"
            species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR016024
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0286219 GO:GO:0005524 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 InterPro:IPR021133
            PROSITE:PS50077 GO:GO:0003677 EMBL:AAFI02000085 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K15192 OMA:TKQEGAI InterPro:IPR022707 Pfam:PF12054
            RefSeq:XP_637789.1 ProteinModelPortal:Q54M42 STRING:Q54M42
            PRIDE:Q54M42 EnsemblProtists:DDB0233434 GeneID:8625503
            KEGG:ddi:DDB_G0286219 InParanoid:Q54M42 ProtClustDB:CLSZ2430112
            Uniprot:Q54M42
        Length = 2005

 Score = 283 (104.7 bits), Expect = 3.7e-23, P = 3.7e-23
 Identities = 60/124 (48%), Positives = 82/124 (66%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY R+DGS +  +R +IV+ FN+D +I   LL+T  GG GLNL
Sbjct:  1791 MLDIVENELFKKHLPSVTYLRMDGSVETMKRHSIVNQFNSDPTIDVLLLTTHVGGLGLNL 1850

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
             TGADTV+  + D+NP  D QA DR HRIGQ + V +YRL+T GT++E +  + K KL + 
Sbjct:  1851 TGADTVIFLEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITSGTLEEKIMGLQKFKLNIA 1910

Query:   118 AAVL 121
               V+
Sbjct:  1911 NTVI 1914


>POMBASE|SPCC1620.14c [details] [associations]
            symbol:snf22 "ATP-dependent DNA helicase Snf22"
            species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
            [GO:0000991 "core RNA polymerase II binding transcription factor
            activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
            [GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
            "chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
            meiotic recombination" evidence=IMP] [GO:0010972 "negative
            regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
            [GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
            by regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:1900400 "regulation of iron ion import by
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
            SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
            GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
            GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
            GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
            InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
            HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
            PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
            DIP:DIP-48377N STRING:O94421 PRIDE:O94421
            EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
            NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
        Length = 1680

 Score = 282 (104.3 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 58/122 (47%), Positives = 85/122 (69%)

Query:    16 YRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQI 74
             Y RLDGST+  +R +++  FN+  S ++  +LSTRAGG GLNL  ADTV+I D D+NP  
Sbjct:  1230 YLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1289

Query:    75 DRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAVLESGVEVDNEGDTS 134
             D QA+DR HRIGQT+ V I RL+T+ +++EN+   A+ KL LD  V+++G + DN+    
Sbjct:  1290 DLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAG-KFDNKSTPE 1348

Query:   135 DK 136
             ++
Sbjct:  1349 ER 1350


>RGD|1594200 [details] [associations]
            symbol:LOC680231 "similar to chromodomain helicase DNA binding
            protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
            Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
        Length = 2881

 Score = 284 (105.0 bits), Expect = 4.4e-23, P = 4.4e-23
 Identities = 62/123 (50%), Positives = 80/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1210 LDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1269

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ + V +YRLVT+ + +  +++ A  KL LD AV
Sbjct:  1270 DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAV 1329

Query:   121 LES 123
             L+S
Sbjct:  1330 LQS 1332


>MGI|MGI:1924001 [details] [associations]
            symbol:Chd9 "chromodomain helicase DNA binding protein 9"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
            MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
            HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
            KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
            EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
            IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
            ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
            PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
            Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
            KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
            OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
            CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
        Length = 2885

 Score = 284 (105.0 bits), Expect = 4.4e-23, P = 4.4e-23
 Identities = 62/123 (50%), Positives = 80/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1210 LDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1269

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT +I D D+NPQ D QA+ RCHRIGQ + V +YRLVT+ + +  +++ A  KL LD AV
Sbjct:  1270 DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAV 1329

Query:   121 LES 123
             L+S
Sbjct:  1330 LQS 1332


>SGD|S000005831 [details] [associations]
            symbol:ISW2 "ATP-dependent DNA translocase involved in
            chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
            evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
            regulation of antisense RNA transcription" evidence=IGI]
            [GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
            "CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
            transcription from RNA polymerase II promoter by pheromones"
            evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
            evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
            "chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
            translocase activity" evidence=IDA] [GO:0003697 "single-stranded
            DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
            "termination of RNA polymerase II transcription" evidence=IGI]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
            GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
            RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
            DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
            PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
            GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
            NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
            Uniprot:Q08773
        Length = 1120

 Score = 279 (103.3 bits), Expect = 4.5e-23, P = 4.5e-23
 Identities = 64/144 (44%), Positives = 86/144 (59%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
             +LDILE         Y R+DGST   ER   +D +N   S  F  LL+TRAGG G+NL  
Sbjct:   518 LLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVT 577

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV++ D D+NPQ D QA DR HRIGQ + V +YR VT+  ++E V E A +KL LD  
Sbjct:   578 ADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQL 637

Query:   120 VLESGV--EVDNEGDTSDKTMGEI 141
             V++ G   +  + G++ D  +  I
Sbjct:   638 VIQQGTGKKTASLGNSKDDLLDMI 661


>FB|FBgn0022787 [details] [associations]
            symbol:Hel89B "Helicase 89B" species:7227 "Drosophila
            melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] [GO:0004386 "helicase activity" evidence=NAS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0019730 "antimicrobial humoral response"
            evidence=IMP] [GO:0006963 "positive regulation of antibacterial
            peptide biosynthetic process" evidence=IMP] [GO:0042742 "defense
            response to bacterium" evidence=IMP] [GO:0045087 "innate immune
            response" evidence=IMP] [GO:0008063 "Toll signaling pathway"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0003677 GO:GO:0042742 GO:GO:0045087
            GO:GO:0004003 GO:GO:0019730 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008063 GO:GO:0006963
            InterPro:IPR022707 Pfam:PF12054 EMBL:AF033104
            ProteinModelPortal:Q71V44 SMR:Q71V44 STRING:Q71V44 PaxDb:Q71V44
            PRIDE:Q71V44 FlyBase:FBgn0022787 InParanoid:Q71V44
            OrthoDB:EOG4ZGMT5 ArrayExpress:Q71V44 Bgee:Q71V44 Uniprot:Q71V44
        Length = 1924

 Score = 282 (104.3 bits), Expect = 4.5e-23, P = 4.5e-23
 Identities = 60/126 (47%), Positives = 83/126 (65%)

Query:     1 MLDILEWTL---DVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNL 57
             MLDI+E  L    +  VTY RLDGS   ++RQ IV+ FN+D SI   LL+T  GG GLNL
Sbjct:  1726 MLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNL 1785

Query:    58 TGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
             TGADTV+  + D+NP  D QA DR HRIGQ + V +YRL+T+ +++E +  + K K++  
Sbjct:  1786 TGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTA 1845

Query:   118 AAVLES 123
               V+ +
Sbjct:  1846 NTVVSA 1851


>ZFIN|ZDB-GENE-070228-1 [details] [associations]
            symbol:ercc6 "excision repair cross-complementing
            rodent repair deficiency, complementation group 6" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-070228-1 GO:GO:0005524
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
            EMBL:CR762493 IPI:IPI00933448 RefSeq:XP_688972.2
            Ensembl:ENSDART00000112380 GeneID:560477 KEGG:dre:560477
            NextBio:20883461 Bgee:F1RDN1 Uniprot:F1RDN1
        Length = 1390

 Score = 280 (103.6 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 56/122 (45%), Positives = 80/122 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             ML+ILE  +   G +Y ++DG+T +  RQ ++  FN +  IF  +L+TR GG G+NLTGA
Sbjct:   845 MLEILEVFVKENGFSYLKMDGTTTIASRQPLIAQFNQNKDIFVFILTTRVGGLGVNLTGA 904

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             + VVI+D D+NP  D QA +R  RIGQ + VT+YRL+T GT++E +Y     K  L   V
Sbjct:   905 NRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRV 964

Query:   121 LE 122
             L+
Sbjct:   965 LK 966


>UNIPROTKB|F1MFS2 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
            damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
            GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
            OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
            Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
        Length = 896

 Score = 277 (102.6 bits), Expect = 5.1e-23, P = 5.1e-23
 Identities = 66/145 (45%), Positives = 83/145 (57%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL+  LD  G +Y R+DGS +  ER   +  F     IF   LSTRAGG G+NLT A
Sbjct:   377 MLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFT-FLSTRAGGVGMNLTAA 434

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQ + V + RL+ + TV+E VY  A  KL L   +
Sbjct:   435 DTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTI 494

Query:   121 LESG---VEVDNEGDTSDKTMGEIL 142
             +E G   +        +D  + EIL
Sbjct:   495 IEGGHFTLGAQKPAADADLQLSEIL 519


>TAIR|locus:2040184 [details] [associations]
            symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
            "chromatin modification" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
            mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
            auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
            root development" evidence=IMP] [GO:0009788 "negative regulation of
            abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=RCA]
            [GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
            proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
            stimulus" evidence=IMP] [GO:0048364 "root development"
            evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
            GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
            GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
            PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
            ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
            PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
            KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
            PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
            GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
        Length = 1384

 Score = 279 (103.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 57/122 (46%), Positives = 80/122 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFN-NDTSIFACLLSTRAGGQGLNLTG 59
             MLD+LE         Y R+DG     ERQ  +D FN  +++ F  LLSTRAGG G+NL  
Sbjct:   623 MLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLAT 682

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I+D D+NP  D QA  R HR+GQT  V IYRL+ +GT++E + ++ K+K++L+  
Sbjct:   683 ADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHL 742

Query:   120 VL 121
             V+
Sbjct:   743 VV 744


>WB|WBGene00004204 [details] [associations]
            symbol:swsn-4 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
            GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 KO:K11647
            GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
            RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
            SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
            KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
            Uniprot:G5EF53
        Length = 1474

 Score = 279 (103.3 bits), Expect = 6.6e-23, P = 6.6e-23
 Identities = 60/125 (48%), Positives = 82/125 (65%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
             M++I E  L+    TY RLDGST+  ER  ++  FN   S +F  +LSTRAGG GLNL  
Sbjct:   878 MMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQT 937

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NP  D QA+DR HRIGQ + V + RL+T  +V+E +   A+ KL +D  
Sbjct:   938 ADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEK 997

Query:   120 VLESG 124
             V+++G
Sbjct:   998 VIQAG 1002


>FB|FBgn0250786 [details] [associations]
            symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
            species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
            chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
            evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
            exchange of chromosomal proteins" evidence=IMP] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
            morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
            GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
            InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
            InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
            RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
            STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
            GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
            FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
            KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
            GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
            GO:GO:0035042 Uniprot:Q7KU24
        Length = 1883

 Score = 280 (103.6 bits), Expect = 7.1e-23, P = 7.1e-23
 Identities = 67/139 (48%), Positives = 88/139 (63%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTG 59
             MLD+L   L      ++RLDGS +   R+  +D FN + S   C LLSTRAGG G+NL  
Sbjct:   864 MLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLAT 923

Query:    60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
             ADTV+I D D+NPQ D QA+ R HRIGQ   V IYRLVT  +V+E + E AK+K++LD  
Sbjct:   924 ADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHL 983

Query:   120 VLESGVEVDNEGDTS-DKT 137
             V++    +D  G T  DK+
Sbjct:   984 VIQ---RMDTTGRTVLDKS 999


>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
            symbol:chd8 "chromodomain helicase DNA binding
            protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
            signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
            ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
            InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
            UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
            Uniprot:B0R0I6
        Length = 2511

 Score = 281 (104.0 bits), Expect = 7.9e-23, P = 7.9e-23
 Identities = 62/123 (50%), Positives = 80/123 (65%)

Query:     2 LDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTGA 60
             LDILE  L      Y R+DG  +   RQA +D F+  D+  F  LL TRAGG G+NLT A
Sbjct:  1199 LDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1258

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DT VI D D+NPQ D QA+ RCHRIGQ++ V +YRL+T+ + +  + + A  KL LD AV
Sbjct:  1259 DTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAV 1318

Query:   121 LES 123
             L+S
Sbjct:  1319 LQS 1321


>TAIR|locus:2116747 [details] [associations]
            symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
            ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
            EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
            OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
        Length = 1202

 Score = 277 (102.6 bits), Expect = 8.1e-23, P = 8.1e-23
 Identities = 57/107 (53%), Positives = 72/107 (67%)

Query:    16 YRRLDGSTQVTERQAIVDAFNNDTSIFAC-LLSTRAGGQGLNLTGADTVVIHDMDFNPQI 74
             Y R+DG     ERQ  +D FN + S   C LLSTRAGG G+NL  ADTV+I+D D+NP  
Sbjct:   567 YERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHA 626

Query:    75 DRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAVL 121
             D QA  R HR+GQT  V IYRL+ KGTV+E + EI K K++L+  V+
Sbjct:   627 DLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVV 673


>UNIPROTKB|G4MNF9 [details] [associations]
            symbol:MGG_06945 "Helicase" species:242507 "Magnaporthe
            oryzae 70-15" [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            RefSeq:XP_003709685.1 ProteinModelPortal:G4MNF9
            EnsemblFungi:MGG_06945T0 GeneID:2685118 KEGG:mgr:MGG_06945
            Uniprot:G4MNF9
        Length = 1103

 Score = 268 (99.4 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
 Identities = 54/107 (50%), Positives = 72/107 (67%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             +L +L         +Y  LDGS  + ERQ IVD FN+D   F  L+ST+AGG GLN+T A
Sbjct:   599 LLQVLRALFQTTHYSYSYLDGSLAIEERQQIVDDFNSDPQQFVFLISTKAGGVGLNITSA 658

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY 107
             + VVI D  +NP  D QA+DR +RIGQTR V ++RLV++GT++E VY
Sbjct:   659 NKVVIFDPHWNPSWDLQAQDRAYRIGQTRDVDVFRLVSQGTIEEIVY 705

 Score = 34 (17.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query:   104 ENVYEIAKRKLILDAAVLESGVEVD--NEGDTSD 135
             ENV   +K ++  +A V +S V+++  N+   SD
Sbjct:  1026 ENVQTKSKVQIKNEAGVADSKVKMEPVNDEPESD 1059


>UNIPROTKB|F1SDB8 [details] [associations]
            symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
            PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
            GeneTree:ENSGT00670000098110 EMBL:CU462855
            Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
        Length = 905

 Score = 273 (101.2 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 64/145 (44%), Positives = 83/145 (57%)

Query:     1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
             MLDIL+  +D  G +Y R+DGS +  ER   +  F     IF  LLSTRAGG G+NLT A
Sbjct:   380 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFIFLLSTRAGGVGMNLTAA 438

Query:    61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
             DTV+  D DFNPQ D QA  R HRIGQ + V + RL+ + TV+E +   A  KL L   +
Sbjct:   439 DTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIICRKAASKLKLTNTI 498

Query:   121 LESG---VEVDNEGDTSDKTMGEIL 142
             +E G   +        +D  + EIL
Sbjct:   499 IEGGRFTLGAQRPAAEADLQLSEIL 523

WARNING:  HSPs involving 292 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      148       148   0.00068  104 3  11 22  0.47    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  542
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  129 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.36u 0.14s 14.50t   Elapsed:  00:00:00
  Total cpu time:  14.38u 0.14s 14.52t   Elapsed:  00:00:00
  Start:  Mon May 20 15:39:35 2013   End:  Mon May 20 15:39:35 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with ETL1 ETL1 ETL1 AT2G02090	protein from Arabidopsis thaliana	7.2e-68
BLAST match view associations BLAST with PIE1 PIE1 PIE1 AT3G12810	protein from Arabidopsis thaliana	9.2e-32
BLAST match view associations BLAST with DDB_G0267638 DDB_G0267638 DDB_G0267638 CHR group protein	gene from Dictyostelium discoideum	4.1e-31
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Canis lupus familiaris	4.1e-31
BLAST match view associations BLAST with DDB_G0267556 DDB_G0267556 DDB_G0267556 CHR group protein	gene from Dictyostelium discoideum	5.9e-31
BLAST match view associations BLAST with Srcap Srcap Srcap Snf2-related CREBBP activator protein	gene from Rattus norvegicus	1.1e-30
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Helicase SRCAP	protein from Homo sapiens	1.1e-30
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Sus scrofa	1.1e-30
BLAST match view associations BLAST with LOC788113 LOC788113 LOC788113 Uncharacterized protein	protein from Bos taurus	1.2e-30
BLAST match view associations BLAST with M03C11.8 M03C11.8 M03C11.8	gene from Caenorhabditis elegans	1.2e-30
BLAST match view associations BLAST with Etl1 Etl1 Etl1 Etl1 homologue	protein from Drosophila melanogaster	6.2e-30
BLAST match view associations BLAST with dom dom dom domino	protein from Drosophila melanogaster	8.0e-30
BLAST match view associations BLAST with Hells Hells Hells helicase, lymphoid specific	gene from Rattus norvegicus	2.5e-29
BLAST match view associations BLAST with ssl-1 ssl-1 ssl-1	gene from Caenorhabditis elegans	6.5e-29
BLAST match view associations BLAST with HELLS HELLS HELLS Lymphoid-specific helicase	protein from Homo sapiens	7.1e-29
BLAST match view associations BLAST with SWR1 SWR1 SWR1 Swi2/Snf2-related ATPase structural component of the SWR1 complex	gene from Saccharomyces cerevisiae	9.5e-29
BLAST match view associations BLAST with orf19.1871 orf19.1871 orf19.1871	gene_product from Candida albicans	1.1e-28
BLAST match view associations BLAST with ino80 ino80 ino80 CHR group protein	gene from Dictyostelium discoideum	1.2e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Gallus gallus	2.5e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Canis lupus familiaris	2.9e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Canis lupus familiaris	2.9e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Canis lupus familiaris	2.9e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Sus scrofa	2.9e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Bos taurus	3.0e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	protein from Homo sapiens	3.7e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Sus scrofa	4.1e-28
BLAST match view associations BLAST with Smarcad1 Smarcad1 Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	protein from Mus musculus	7.6e-28
BLAST match view associations BLAST with Smarcad1 Smarcad1 Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`	gene from Rattus norvegicus	7.7e-28
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	protein from Bos taurus	7.7e-28
BLAST match view associations BLAST with Hells Hells Hells helicase, lymphoid specific	protein from Mus musculus	8.2e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Lymphoid-specific helicase	protein from Homo sapiens	8.6e-28
BLAST match view associations BLAST with smarcad1 smarcad1 smarcad1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	protein from Xenopus (Silurana) tropicalis	9.5e-28
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Canis lupus familiaris	1.1e-27
BLAST match view associations BLAST with INO80 INO80 INO80 DNA helicase INO80	protein from Homo sapiens	1.1e-27
BLAST match view associations BLAST with INO80 INO80 INO80 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-27
BLAST match view associations BLAST with INO80 INO80 INO80 Uncharacterized protein	protein from Gallus gallus	1.2e-27
BLAST match view associations BLAST with INO80 INO80 INO80 Uncharacterized protein	protein from Sus scrofa	1.2e-27
BLAST match view associations BLAST with ino80 ino80 ino80 INO80 homolog (S. cerevisiae)	gene_product from Danio rerio	1.2e-27
BLAST match view associations BLAST with Smarca1 Smarca1 Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	protein from Mus musculus	1.7e-27
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromatin remodeler that regulates various aspects of transcription	gene from Saccharomyces cerevisiae	1.7e-27
BLAST match view associations BLAST with si:dkey-76p7.6 si:dkey-76p7.6 si:dkey-76p7.6	gene_product from Danio rerio	1.8e-27
BLAST match view associations BLAST with SMARCAD1 SMARCAD1 SMARCAD1 Uncharacterized protein	protein from Gallus gallus	1.8e-27
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	3.2e-27
BLAST match view associations BLAST with Ino80 Ino80 Ino80 INO80 homolog (S. cerevisiae)	gene from Rattus norvegicus	5.0e-27
BLAST match view associations BLAST with Ino80 Ino80 Ino80 INO80 homolog (S. cerevisiae)	protein from Mus musculus	5.0e-27
BLAST match view associations BLAST with INO80 INO80 INO80 Uncharacterized protein	protein from Bos taurus	5.0e-27
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	5.8e-27
BLAST match view associations BLAST with PF08_0048 PF08_0048 PF08_0048 ATP-dependent helicase, putative	gene from Plasmodium falciparum	9.4e-27
BLAST match view associations BLAST with PF08_0048 PF08_0048 PF08_0048 Probable ATP-dependent helicase PF08_0048	protein from Plasmodium falciparum 3D7	9.4e-27
BLAST match view associations BLAST with FUN30 FUN30 FUN30 Snf2p family member with ATP-dependent chromatin remodeling activity	gene from Saccharomyces cerevisiae	1.1e-26
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Gallus gallus	1.1e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Sus scrofa	1.2e-26
BLAST match view associations BLAST with hells hells hells helicase, lymphoid-specific	gene_product from Danio rerio	1.3e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-26
BLAST match view associations BLAST with si:dkey-148b12.1 si:dkey-148b12.1 si:dkey-148b12.1	gene_product from Danio rerio	2.5e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Sus scrofa	2.5e-26
BLAST match view associations BLAST with isw isw isw CHR group protein	gene from Dictyostelium discoideum	2.5e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Gallus gallus	2.5e-26
BLAST match view associations BLAST with chd-1 chd-1 chd-1	gene from Caenorhabditis elegans	2.5e-26
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Gallus gallus	2.6e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Bos taurus	2.7e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Chromodomain-helicase-DNA-binding protein 2	protein from Homo sapiens	2.7e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Sus scrofa	2.7e-26
BLAST match view associations BLAST with CHD2 CHD2 CHD2 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-26
BLAST match view associations BLAST with smarcad1 smarcad1 smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	gene_product from Danio rerio	2.8e-26
BLAST match view associations BLAST with Iswi Iswi Iswi Imitation SWI	protein from Drosophila melanogaster	5.1e-26
BLAST match view associations BLAST with CHR23 CHR23 CHR23 AT5G19310	protein from Arabidopsis thaliana	6.9e-26
BLAST match view associations BLAST with chd2 chd2 chd2 chromodomain helicase DNA binding protein 2	gene_product from Danio rerio	9.1e-26
BLAST match view associations BLAST with chd-3 chd-3 chd-3	gene from Caenorhabditis elegans	1.1e-25
BLAST match view associations BLAST with chd-3 chd-3 chd-3 Chromodomain-helicase-DNA-binding protein 3 homolog	protein from Caenorhabditis elegans	1.1e-25
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-25
BLAST match view associations BLAST with btaf1 btaf1 btaf1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated	gene_product from Danio rerio	1.2e-25
BLAST match view associations BLAST with DDB_G0293012 DDB_G0293012 DDB_G0293012 CHR group protein	gene from Dictyostelium discoideum	1.4e-25
BLAST match view associations BLAST with CHD1L CHD1L CHD1L Uncharacterized protein	protein from Gallus gallus	1.4e-25
BLAST match view associations BLAST with DDB_G0280705 DDB_G0280705 DDB_G0280705 CHR group protein	gene from Dictyostelium discoideum	1.6e-25
BLAST match view associations BLAST with ERCC6 ERCC6 ERCC6 DNA excision repair protein ERCC-6	protein from Homo sapiens	1.6e-25
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Gallus gallus	1.8e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Gallus gallus	2.3e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Gallus gallus	2.4e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Gallus gallus	2.4e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Chromodomain-helicase-DNA-binding protein 1	protein from Homo sapiens	2.9e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Uncharacterized protein	protein from Canis lupus familiaris	2.9e-25
BLAST match view associations BLAST with Chd1 Chd1 Chd1 chromodomain helicase DNA binding protein 1	protein from Mus musculus	2.9e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Uncharacterized protein	protein from Canis lupus familiaris	3.0e-25
BLAST match view associations BLAST with CHD1 CHD1 CHD1 Uncharacterized protein	protein from Bos taurus	3.1e-25
BLAST match view associations BLAST with LOC100359912 LOC100359912 LOC100359912 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like	gene from Rattus norvegicus	3.4e-25