BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032027
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3
Length = 3230
Score = 146 bits (369), Expect = 3e-35, Method: Composition-based stats.
Identities = 70/124 (56%), Positives = 92/124 (74%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLD+LE L G Y RLDGST+V +RQA+++ FN D IF +LSTR+GG G+NLTGA
Sbjct: 2071 MLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGA 2130
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTVV +D D+NP +D QA+DRCHRIGQTR V IYRL+++ TV+EN+ + A +K +L
Sbjct: 2131 DTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMA 2190
Query: 121 LESG 124
+E G
Sbjct: 2191 IEGG 2194
>sp|Q4WAS9|SWR1_ASPFU Helicase swr1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=swr1 PE=3 SV=1
Length = 1695
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 92/124 (74%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDILE L++ G Y RLDG+T+V +RQ + D FNND I +LS+R+GG G+NLTGA
Sbjct: 1406 MLDILEQFLNIHGHRYLRLDGTTKVEQRQILTDRFNNDDRILVFILSSRSGGLGINLTGA 1465
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D+D+NP +D+Q +DRCHRIGQTR V IYR V++ T++ N+ A +K +LD V
Sbjct: 1466 DTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILRKANQKRMLDDVV 1525
Query: 121 LESG 124
++ G
Sbjct: 1526 IQEG 1529
>sp|Q5ARK3|SWR1_EMENI Helicase swr1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=swr1 PE=3 SV=2
Length = 1698
Score = 144 bits (364), Expect = 1e-34, Method: Composition-based stats.
Identities = 66/124 (53%), Positives = 93/124 (75%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLD+LE L++ G Y RLDG+T+V +RQ + D FNND I A +LS+R+GG G+NLTGA
Sbjct: 1401 MLDVLEQFLNIHGHRYLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLTGA 1460
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D+D+NP +D+Q +DRCHRIGQTR V IYR V++ T++ N+ A +K +LD V
Sbjct: 1461 DTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVV 1520
Query: 121 LESG 124
++ G
Sbjct: 1521 IQEG 1524
>sp|Q4IAK7|SWR1_GIBZE Helicase SWR1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=SWR1 PE=3 SV=1
Length = 1691
Score = 144 bits (362), Expect = 3e-34, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 92/124 (74%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L++ G Y RLDG+T+V +RQ + D FNND I +LSTR+GG G+NLTGA
Sbjct: 1399 VLDILEQFLNIHGHKYLRLDGATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLTGA 1458
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+Q +DRCHRIGQTR V IYRLV++ T++ N+ A +K +LD V
Sbjct: 1459 DTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVV 1518
Query: 121 LESG 124
++ G
Sbjct: 1519 IQEG 1522
>sp|Q7S133|SWR1_NEUCR Helicase swr-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=swr-1 PE=3 SV=1
Length = 1845
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 92/124 (74%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L++ G Y RLDG+T+V +RQ + D FN+D I +LSTR+GG G+NLTGA
Sbjct: 1534 VLDILEQFLNIHGHKYLRLDGATKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLTGA 1593
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+Q +DRCHRIGQTR V IYRLV++ T++ N+ A +K +LD V
Sbjct: 1594 DTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVV 1653
Query: 121 LESG 124
++ G
Sbjct: 1654 IQEG 1657
>sp|Q6CA87|SWR1_YARLI Helicase SWR1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SWR1 PE=3 SV=1
Length = 1772
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 92/124 (74%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LD+LE L++ G+ Y RLDG+T++ +RQ + + FN D I +LSTR+GG G+NLTGA
Sbjct: 1497 VLDVLEQFLNIHGLRYMRLDGATKIEQRQLLTERFNTDPKIPVFILSTRSGGLGINLTGA 1556
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+Q +DRCHRIGQTR V IYR V++ T++ N+ + A +K ILD V
Sbjct: 1557 DTVIFYDSDWNPSMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKQILDNVV 1616
Query: 121 LESG 124
++ G
Sbjct: 1617 IQDG 1620
>sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2
Length = 3198
Score = 140 bits (353), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 91/124 (73%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLD+LE L+ G Y RLDGST+V +RQ +++ FN D IF +LSTR+GG G+NLTGA
Sbjct: 1686 MLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGA 1745
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D QA+DRCHRIGQTR V IYRLV++ T++ N+ + A +K +L
Sbjct: 1746 DTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMA 1805
Query: 121 LESG 124
+E G
Sbjct: 1806 IEGG 1809
>sp|G5EDG2|SMRCD_CAEEL SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 homolog
OS=Caenorhabditis elegans GN=M03C11.8 PE=3 SV=1
Length = 989
Score = 140 bits (352), Expect = 3e-33, Method: Composition-based stats.
Identities = 66/122 (54%), Positives = 91/122 (74%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDILE L++ G +Y+RLDG T V +RQ +++ FN +F LLSTRAGG G+NLT A
Sbjct: 781 MLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSA 840
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
+ ++IHD+DFNP D+QAEDRCHR+GQ +PV + RLV+KGTV+ + +AK+KL L+ V
Sbjct: 841 NHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQV 900
Query: 121 LE 122
+
Sbjct: 901 TD 902
>sp|Q9VL72|SMRCD_DROME SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 homolog
OS=Drosophila melanogaster GN=Etl1 PE=1 SV=1
Length = 844
Score = 139 bits (350), Expect = 5e-33, Method: Composition-based stats.
Identities = 67/120 (55%), Positives = 87/120 (72%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDI+E L + + RLDG+T V RQ ++ FN D SIF LLST+AGG G+NLT A
Sbjct: 680 MLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAA 739
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DT VIHD+DFNP D+QAEDRCHR+GQ RPVTIYRL+++ T++E + A+ KL L+ +
Sbjct: 740 DTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDI 799
>sp|O13682|SWR1_SCHPO Helicase swr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=swr1 PE=3 SV=1
Length = 1288
Score = 138 bits (347), Expect = 1e-32, Method: Composition-based stats.
Identities = 66/124 (53%), Positives = 92/124 (74%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L++ G Y RLDG+T++ +RQ + + FNND I +LSTR+GG G+NLTGA
Sbjct: 1019 VLDILEQFLNIHGHRYLRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGA 1078
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NPQ+D QA+DR HRIGQTR V IYRL+++ TV+ N+ A +K +LD V
Sbjct: 1079 DTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIV 1138
Query: 121 LESG 124
++ G
Sbjct: 1139 IQGG 1142
>sp|Q9NEL2|SSL1_CAEEL Helicase ssl-1 OS=Caenorhabditis elegans GN=ssl-1 PE=2 SV=4
Length = 2395
Score = 136 bits (342), Expect = 5e-32, Method: Composition-based stats.
Identities = 66/125 (52%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLD+L+ L G Y RLDG+T V +RQA+++ FN D +F +LSTR+GG G+NLTGA
Sbjct: 1216 MLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLTGA 1275
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLIL-DAA 119
DTV+ +D D+NP +D QA+DRCHRIGQTR V+IYRL+++ T++EN+ A +K L + A
Sbjct: 1276 DTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELA 1335
Query: 120 VLESG 124
+ E+G
Sbjct: 1336 IDEAG 1340
>sp|P0CO18|SWR1_CRYNJ Helicase SWR1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=SWR1 PE=3 SV=1
Length = 1246
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L G Y RLDGST++ +RQ + + FN+D+ IF + S+R+GG G+NLTGA
Sbjct: 966 VLDILEMFLSHNGHRYLRLDGSTKIEDRQVLTERFNSDSRIFVFIASSRSGGVGINLTGA 1025
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV +D D+NP +DRQ DR HRIGQTR V IYR V+ TV+EN+ A++K +LD V
Sbjct: 1026 DTVFFYDSDWNPSMDRQCMDRAHRIGQTREVHIYRFVSSHTVEENMLRKAEQKRLLDKMV 1085
Query: 121 LESG 124
++ G
Sbjct: 1086 IQEG 1089
>sp|P0CO19|SWR1_CRYNB Helicase SWR1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=SWR1 PE=3 SV=1
Length = 1246
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L G Y RLDGST++ +RQ + + FN+D+ IF + S+R+GG G+NLTGA
Sbjct: 966 VLDILEMFLSHNGHRYLRLDGSTKIEDRQVLTERFNSDSRIFVFIASSRSGGVGINLTGA 1025
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV +D D+NP +DRQ DR HRIGQTR V IYR V+ TV+EN+ A++K +LD V
Sbjct: 1026 DTVFFYDSDWNPSMDRQCMDRAHRIGQTREVHIYRFVSSHTVEENMLRKAEQKRLLDKMV 1085
Query: 121 LESG 124
++ G
Sbjct: 1086 IQEG 1089
>sp|Q6BKC2|SWR1_DEBHA Helicase SWR1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=SWR1 PE=3 SV=2
Length = 1616
Score = 135 bits (339), Expect = 1e-31, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 90/124 (72%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L++ G Y RLDG+T++ +RQ + + FN D+ I +LSTR+GG G+NLTGA
Sbjct: 1360 VLDILEQFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDSKIPVFILSTRSGGLGINLTGA 1419
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+Q +DRCHRIGQ+R V IYR V++ T++ N+ A +K LD V
Sbjct: 1420 DTVIFYDSDWNPAMDKQCQDRCHRIGQSRDVHIYRFVSEYTIESNILRKANQKRQLDNVV 1479
Query: 121 LESG 124
++ G
Sbjct: 1480 IQEG 1483
>sp|Q05471|SWR1_YEAST Helicase SWR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SWR1 PE=1 SV=1
Length = 1514
Score = 133 bits (335), Expect = 4e-31, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 90/124 (72%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LD+LE L+ G Y RLDG+T++ +RQ + + FN D+ I +LS+R+GG G+NLTGA
Sbjct: 1274 VLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGA 1333
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+Q +DRCHRIGQTR V IYR V++ T++ N+ + A +K LD V
Sbjct: 1334 DTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVV 1393
Query: 121 LESG 124
++ G
Sbjct: 1394 IQEG 1397
>sp|Q759G7|SWR1_ASHGO Helicase SWR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SWR1 PE=3 SV=2
Length = 1486
Score = 133 bits (334), Expect = 4e-31, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 89/124 (71%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L+ G Y RLDG+T++ +RQ + + FN D I +LS+R+GG G+NLTGA
Sbjct: 1245 VLDILEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDPRITVFILSSRSGGLGINLTGA 1304
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+Q +DRCHRIGQTR V IYR V++ T++ N+ + A +K LD V
Sbjct: 1305 DTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNIV 1364
Query: 121 LESG 124
++ G
Sbjct: 1365 IQKG 1368
>sp|Q9ULG1|INO80_HUMAN DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 SV=2
Length = 1556
Score = 132 bits (333), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 87/124 (70%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D+LE + TY RLDGS++++ER+ +V F N IF LLSTRAGG G+NLT A
Sbjct: 1129 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAA 1188
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K + V
Sbjct: 1189 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1248
Query: 121 LESG 124
+ G
Sbjct: 1249 ISGG 1252
>sp|Q6FK48|SWR1_CANGA Helicase SWR1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=SWR1 PE=3 SV=1
Length = 1450
Score = 132 bits (333), Expect = 6e-31, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 90/124 (72%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L+ G Y RLDG+T++ +RQ + + FN+D I +LS+R+GG G+NLTGA
Sbjct: 1206 VLDILEQFLNYHGYLYMRLDGATKIEDRQILTERFNSDPKITVFILSSRSGGLGINLTGA 1265
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+Q +DRCHRIGQTR V IYR V++ T++ N+ + A +K LD +
Sbjct: 1266 DTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDDVI 1325
Query: 121 LESG 124
++ G
Sbjct: 1326 IQKG 1329
>sp|Q6CJ38|SWR1_KLULA Helicase SWR1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SWR1 PE=3
SV=1
Length = 1572
Score = 132 bits (332), Expect = 7e-31, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 90/124 (72%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L+ G Y RLDG+T++ +RQ + + FN+D I +LS+R+GG G+NLTGA
Sbjct: 1338 VLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTGA 1397
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+Q +DRCHRIGQTR V IYR V+ T++ N+ + A +K LD V
Sbjct: 1398 DTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVV 1457
Query: 121 LESG 124
+++G
Sbjct: 1458 IQTG 1461
>sp|Q59U81|SWR1_CANAL Helicase SWR1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SWR1 PE=3 SV=1
Length = 1641
Score = 132 bits (331), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 89/124 (71%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L++ G Y RLDG+T++ +RQ + + FN D I +LSTR+GG G+NLTGA
Sbjct: 1394 VLDILEQFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLTGA 1453
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+Q +DRCHRIGQ R V IYR V++ T++ N+ + A +K LD V
Sbjct: 1454 DTVIFYDSDWNPAMDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVV 1513
Query: 121 LESG 124
++ G
Sbjct: 1514 IQEG 1517
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 131 bits (329), Expect = 2e-30, Method: Composition-based stats.
Identities = 64/116 (55%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDIL + + RLDGS +ER+ + +FN D +F L+STRAGG G+NLT A
Sbjct: 627 MLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAA 686
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
DTV+I+D D+NPQ D QA+DRCHRIGQT+PV +YRLVT T+D+ + E AKRKL
Sbjct: 687 DTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 742
>sp|Q9H4L7|SMRCD_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Homo
sapiens GN=SMARCAD1 PE=1 SV=2
Length = 1026
Score = 130 bits (328), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/132 (49%), Positives = 92/132 (69%), Gaps = 5/132 (3%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDILE L Y RLDG TQ++ER ++D FN D IF LLST+AGG G+NLT A
Sbjct: 882 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 941
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
+ V++HD+D NP D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL
Sbjct: 942 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKL-----K 996
Query: 121 LESGVEVDNEGD 132
LE + +EGD
Sbjct: 997 LEQDMTTVDEGD 1008
>sp|Q4P328|SWR1_USTMA Helicase SWR1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SWR1
PE=3 SV=1
Length = 1830
Score = 130 bits (328), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/124 (53%), Positives = 88/124 (70%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L+ G Y RLDG+T+V RQA+ + FN D I A +LSTR+GG G+NLTGA
Sbjct: 1561 VLDILESFLNYHGYRYLRLDGATKVESRQALTEQFNRDARISAFILSTRSGGLGINLTGA 1620
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D+D+N I+ Q DR HRIGQTR V IYR VT+ T++EN+ A +K +LD V
Sbjct: 1621 DTVLFYDLDWNAAIEAQCMDRAHRIGQTRDVHIYRFVTEHTIEENMLRKANQKRLLDNVV 1680
Query: 121 LESG 124
++ G
Sbjct: 1681 IQQG 1684
>sp|Q60848|HELLS_MOUSE Lymphocyte-specific helicase OS=Mus musculus GN=Hells PE=1 SV=2
Length = 821
Score = 130 bits (328), Expect = 2e-30, Method: Composition-based stats.
Identities = 64/116 (55%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDIL + + RLDGS +ER+ + +FN D +F L+STRAGG G+NLT A
Sbjct: 610 MLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINLTAA 669
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYE--IAKRKL 114
DTV+I+D D+NPQ D QA+DRCHRIGQT+PV +YRLVT T+D+ + E AKRKL
Sbjct: 670 DTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 725
>sp|E1B7X9|SMRCD_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Bos
taurus GN=SMARCAD1 PE=3 SV=2
Length = 1028
Score = 130 bits (328), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/132 (49%), Positives = 91/132 (68%), Gaps = 5/132 (3%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDILE L Y RLDG TQ++ER ++D FN D IF LLST+AGG G+NLT A
Sbjct: 884 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 943
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
+ V++HD+D NP D+QAEDRCHR+GQT+ V + +L+ +GT++E++ +I ++KL
Sbjct: 944 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKL-----K 998
Query: 121 LESGVEVDNEGD 132
LE + +EGD
Sbjct: 999 LEQDMTTVDEGD 1010
>sp|C0H4W3|HEPF1_PLAF7 Probable ATP-dependent helicase PF08_0048 OS=Plasmodium falciparum
(isolate 3D7) GN=PF08_0048 PE=3 SV=1
Length = 2082
Score = 130 bits (328), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/116 (54%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDILE L+ + ++ RLDGST+V +RQ IV FNND SIF + STR+G G+NLT A
Sbjct: 1796 MLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAA 1855
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVY--EIAKRKL 114
+ V+ +D D+NP ID+QA DRCHRIGQT+ V ++R V + TV+EN++ ++ KRKL
Sbjct: 1856 NVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKL 1911
>sp|Q04692|SMRCD_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Mus
musculus GN=Smarcad1 PE=1 SV=2
Length = 1021
Score = 130 bits (328), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/117 (52%), Positives = 87/117 (74%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDILE L Y RLDG TQ++ER ++D FN D IF LLST+AGG G+NLT A
Sbjct: 877 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 936
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
+ V++HD+D NP D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL L+
Sbjct: 937 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 993
>sp|D3Z9Z9|SMRCD_RAT SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Rattus
norvegicus GN=Smarcad1 PE=3 SV=1
Length = 1024
Score = 130 bits (328), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/117 (52%), Positives = 87/117 (74%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDILE L Y RLDG TQ++ER ++D FN D IF LLST+AGG G+NLT A
Sbjct: 880 MLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSA 939
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILD 117
+ V++HD+D NP D+QAEDRCHR+GQT+ V + +L+++GT++E++ +I ++KL L+
Sbjct: 940 NVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 996
>sp|Q6ZPV2|INO80_MOUSE DNA helicase INO80 OS=Mus musculus GN=Ino80 PE=2 SV=2
Length = 1559
Score = 130 bits (327), Expect = 3e-30, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 86/124 (69%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D+LE + TY RLDGS++++ER+ +V F IF LLSTRAGG G+NLT A
Sbjct: 1132 MIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAA 1191
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP +D+QA DR HR+GQT+ VT+YRL+ KGT++E + + AK K + V
Sbjct: 1192 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMV 1251
Query: 121 LESG 124
+ G
Sbjct: 1252 ISGG 1255
>sp|P87114|FFT1_SCHPO ATP-dependent helicase fft1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fft1 PE=3 SV=1
Length = 944
Score = 130 bits (327), Expect = 3e-30, Method: Composition-based stats.
Identities = 67/147 (45%), Positives = 97/147 (65%), Gaps = 6/147 (4%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE+ L+ + + + RLDGST V RQ ++D F+ + + LLST++GG G+NLT A
Sbjct: 792 VLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENYKVFLLSTKSGGFGINLTCA 851
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
+ V++ D FNP D QAEDR HR+GQTRPV +YRL+TK T++EN+ +A KL
Sbjct: 852 NIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRLANTKL-----T 906
Query: 121 LESGVEVDNEGDTSDKTMGEILSSILM 147
LES + D+E + GE++ S+ M
Sbjct: 907 LESSLTTDSE-KIQKEISGELMKSLQM 932
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 130 bits (327), Expect = 3e-30, Method: Composition-based stats.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 3/149 (2%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
+LDILE G Y RLDG T ER+ +DAFN ++S F +LSTRAGG G+NL
Sbjct: 518 LLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLAS 577
Query: 60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
AD V+++D D+NPQ+D QA DR HRIGQ +PV ++RL+T TV+E + E A+ KL LD+
Sbjct: 578 ADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSI 637
Query: 120 VLESGVEVDNEGDTSDKTMGEILSSILMG 148
V++ G +D + + K E+L I G
Sbjct: 638 VIQQGRLIDQQSNKLAKE--EMLQMIRHG 664
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 129 bits (324), Expect = 6e-30, Method: Composition-based stats.
Identities = 71/147 (48%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
MLDIL L + G+ ++RLDG+ +R+ +D FN+ D++ F LLSTRAGG G+NL
Sbjct: 723 MLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT 782
Query: 60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
ADTVVI D D+NPQ D QA R HRIGQ V +YRLV+K TV+E V E A++K+IL+ A
Sbjct: 783 ADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYA 842
Query: 120 VLESGVEVDNEGDTSDKTMGEILSSIL 146
++ GV N+ ++ LS+IL
Sbjct: 843 IISLGVTDGNKYTKKNEPNAGELSAIL 869
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 129 bits (323), Expect = 8e-30, Method: Composition-based stats.
Identities = 71/134 (52%), Positives = 89/134 (66%), Gaps = 4/134 (2%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
MLDIL L + ++RLDGS + R+ +D FN D S F LLSTRAGG G+NL
Sbjct: 819 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 878
Query: 60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKGTV+E + E AK+K++LD
Sbjct: 879 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 938
Query: 120 VLESGVEVDNEGDT 133
V++ +D G T
Sbjct: 939 VIQ---RMDTTGRT 949
>sp|Q5FWR0|SMRCD_XENTR SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Xenopus
tropicalis GN=smarcad1 PE=2 SV=1
Length = 1003
Score = 128 bits (322), Expect = 1e-29, Method: Composition-based stats.
Identities = 64/132 (48%), Positives = 92/132 (69%), Gaps = 5/132 (3%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDI+E L Y RLDG TQ++ER ++D FN D IF LLST+AGG G+NLT A
Sbjct: 859 MLDIIEVFLRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSA 918
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
+ V++HD+D NP D+QAEDRCHR+GQT+ V + +L+ KGT++E++ +I+++KL
Sbjct: 919 NIVILHDIDCNPYNDKQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKL-----R 973
Query: 121 LESGVEVDNEGD 132
LE + ++ GD
Sbjct: 974 LEQDMTTNDTGD 985
>sp|O74842|FFT2_SCHPO ATP-dependent helicase fft2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=fft2 PE=1 SV=1
Length = 1284
Score = 127 bits (320), Expect = 2e-29, Method: Composition-based stats.
Identities = 62/132 (46%), Positives = 89/132 (67%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDILE LD + ++Y RLDGSTQV RQ I+D F+ + + LLST+AGG G+NL A
Sbjct: 952 MLDILEQVLDTLKISYVRLDGSTQVEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINLACA 1011
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
+ V+++D +NP D QAEDR HR+GQ R VT+ RL+T T++E + ++A KL LD ++
Sbjct: 1012 NVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDMSL 1071
Query: 121 LESGVEVDNEGD 132
G + + G+
Sbjct: 1072 SSDGKDREEIGE 1083
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 127 bits (318), Expect = 3e-29, Method: Composition-based stats.
Identities = 71/147 (48%), Positives = 94/147 (63%), Gaps = 1/147 (0%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSI-FACLLSTRAGGQGLNLTG 59
MLDIL L + G ++RLDG+ R+ +D FN S F LLSTRAGG G+NL
Sbjct: 718 MLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMT 777
Query: 60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
ADTV+I D D+NPQ D QA R HRIGQ V +YRL++K T++E+V E A+RK+IL+ A
Sbjct: 778 ADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYA 837
Query: 120 VLESGVEVDNEGDTSDKTMGEILSSIL 146
++ GV + +DK E LS+IL
Sbjct: 838 IISLGVTDKQKNSKNDKFSAEELSAIL 864
>sp|Q0UG82|INO80_PHANO Putative DNA helicase INO80 OS=Phaeosphaeria nodorum (strain SN15 /
ATCC MYA-4574 / FGSC 10173) GN=INO80 PE=3 SV=2
Length = 1673
Score = 127 bits (318), Expect = 4e-29, Method: Composition-based stats.
Identities = 62/124 (50%), Positives = 85/124 (68%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D++E L Y RLDGST++ +R+ V F +D +IF LLSTRAGG G+NLT A
Sbjct: 1427 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQSDPTIFVFLLSTRAGGLGINLTSA 1486
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+T GT++E + + A +K + V
Sbjct: 1487 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITSGTIEERIRKRALQKEEVQRVV 1546
Query: 121 LESG 124
+ G
Sbjct: 1547 ISGG 1550
>sp|E7F1C4|SMRDB_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1B OS=Danio
rerio GN=smarcad1b PE=3 SV=1
Length = 954
Score = 126 bits (317), Expect = 4e-29, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 93/146 (63%), Gaps = 3/146 (2%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
MLDILE L Y RLDGST +++R ++D FN D IF LLSTRAGG G+NLT A
Sbjct: 810 MLDILEVFLRHHKHRYNRLDGSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSA 869
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
+ V++HD+D NP D+QAE RCHR+GQT+ V + +L++K ++++ + I +RKL L+
Sbjct: 870 NVVILHDIDCNPYNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQ-- 927
Query: 121 LESGVEVDNEGDTSDKTMGEILSSIL 146
E D E DT M +L + L
Sbjct: 928 -EMTATQDGEEDTLPDDMTTLLKASL 952
>sp|A4R227|INO80_MAGO7 Putative DNA helicase INO80 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=INO80 PE=3 SV=1
Length = 1944
Score = 126 bits (316), Expect = 5e-29, Method: Composition-based stats.
Identities = 65/140 (46%), Positives = 89/140 (63%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D++E L Y RLDGST+ +R+ V F + SIF LLSTRAGG G+NLT A
Sbjct: 1687 MIDLMEEYLTYRNWKYCRLDGSTKFEDRRDTVHDFQTNPSIFVFLLSTRAGGLGINLTSA 1746
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+T+GT++E + + A +K + V
Sbjct: 1747 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRAMQKEEVQRVV 1806
Query: 121 LESGVEVDNEGDTSDKTMGE 140
+ G + D S + E
Sbjct: 1807 ITGGAGASSGVDFSGRRAPE 1826
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 125 bits (315), Expect = 7e-29, Method: Composition-based stats.
Identities = 68/147 (46%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNN-DTSIFACLLSTRAGGQGLNLTG 59
ML+IL + + G Y+RLDG+ + R+ +D FN D+ F LLSTRAGG G+NL
Sbjct: 732 MLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNT 791
Query: 60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
ADTV+I D D+NPQ D QA R HRIGQ V +YR ++K TV+E++ E A+RK+IL+ A
Sbjct: 792 ADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYA 851
Query: 120 VLESGVEVDNEGDTSDKTMGEILSSIL 146
++ GV ++ +DK + LS+IL
Sbjct: 852 IISLGVTEKSKNSKNDKYDAQELSAIL 878
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 125 bits (314), Expect = 8e-29, Method: Composition-based stats.
Identities = 75/154 (48%), Positives = 98/154 (63%), Gaps = 8/154 (5%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
MLDIL L ++RLDGS + R+ +D FN + S F LLSTRAGG G+NL
Sbjct: 812 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 871
Query: 60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD
Sbjct: 872 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 931
Query: 120 VLE----SGVEVDNEGDTSDKTM---GEILSSIL 146
V++ +G V + G T + E LS+IL
Sbjct: 932 VIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAIL 965
>sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 /
FGSC A1156) GN=ino80 PE=3 SV=1
Length = 1690
Score = 125 bits (314), Expect = 9e-29, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 83/124 (66%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D++E L Y RLDGST++ +R+ V F IF LLSTRAGG G+NLT A
Sbjct: 1427 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAA 1486
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+T+GT++E + + A +K + V
Sbjct: 1487 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVV 1546
Query: 121 LESG 124
+ G
Sbjct: 1547 ITGG 1550
>sp|Q4WTV7|INO80_ASPFU Putative DNA helicase ino80 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ino80 PE=3
SV=1
Length = 1708
Score = 125 bits (314), Expect = 9e-29, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 83/124 (66%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D++E L Y RLDGST++ +R+ V F IF LLSTRAGG G+NLT A
Sbjct: 1446 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAA 1505
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+T+GT++E + + A +K + V
Sbjct: 1506 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVV 1565
Query: 121 LESG 124
+ G
Sbjct: 1566 ISGG 1569
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 125 bits (314), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/134 (51%), Positives = 89/134 (66%), Gaps = 4/134 (2%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
MLDIL L ++RLDGS + R+ +D FN + S F LLSTRAGG G+NL
Sbjct: 816 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 875
Query: 60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD
Sbjct: 876 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 935
Query: 120 VLESGVEVDNEGDT 133
V++ +D G T
Sbjct: 936 VIQ---RMDTTGKT 946
>sp|P31380|FUN30_YEAST ATP-dependent helicase FUN30 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FUN30 PE=1 SV=1
Length = 1131
Score = 125 bits (313), Expect = 1e-28, Method: Composition-based stats.
Identities = 60/122 (49%), Positives = 83/122 (68%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
+LDILE L + + RLDGSTQV +RQ ++D F D I +LST+AGG G+NL A
Sbjct: 978 VLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCA 1037
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
+ V+I D FNP DRQA DR HR+GQT+ V I L+TK +++E ++++AK KL LD+ +
Sbjct: 1038 NNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI 1097
Query: 121 LE 122
E
Sbjct: 1098 SE 1099
>sp|A1CZE5|INO80_NEOFI Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020
/ DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1
Length = 1708
Score = 125 bits (313), Expect = 1e-28, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 83/124 (66%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D++E L Y RLDGST++ +R+ V F IF LLSTRAGG G+NLT A
Sbjct: 1446 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAA 1505
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+T+GT++E + + A +K + V
Sbjct: 1506 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVV 1565
Query: 121 LESG 124
+ G
Sbjct: 1566 ISGG 1569
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 124 bits (312), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/134 (51%), Positives = 89/134 (66%), Gaps = 4/134 (2%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTS-IFACLLSTRAGGQGLNLTG 59
MLDIL L ++RLDGS + R+ +D FN + S F LLSTRAGG G+NL
Sbjct: 814 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 873
Query: 60 ADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAA 119
ADTVVI D D+NPQ D QA+ R HRIGQ + V IYRLVTKG+V+E++ E AK+K++LD
Sbjct: 874 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 933
Query: 120 VLESGVEVDNEGDT 133
V++ +D G T
Sbjct: 934 VIQ---RMDTTGKT 944
>sp|A1C9W6|INO80_ASPCL Putative DNA helicase ino80 OS=Aspergillus clavatus (strain ATCC 1007
/ CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ino80
PE=3 SV=1
Length = 1707
Score = 124 bits (312), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 83/124 (66%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D++E L Y RLDGST++ +R+ V F IF LLSTRAGG G+NLT A
Sbjct: 1447 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAA 1506
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+T+GT++E + + A +K + V
Sbjct: 1507 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVV 1566
Query: 121 LESG 124
+ G
Sbjct: 1567 ISGG 1570
>sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=ino80 PE=3 SV=1
Length = 1697
Score = 124 bits (311), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 83/124 (66%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D++E L Y RLDGST++ +R+ V F IF LLSTRAGG G+NLT A
Sbjct: 1434 MIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAA 1493
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+T+GT++E + + A +K + V
Sbjct: 1494 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVV 1553
Query: 121 LESG 124
+ G
Sbjct: 1554 ITGG 1557
>sp|Q6BGY8|INO80_DEBHA Putative DNA helicase INO80 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=INO80 PE=3 SV=2
Length = 1364
Score = 124 bits (311), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/136 (45%), Positives = 92/136 (67%)
Query: 1 MLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGA 60
M+D++E L Y RLDGS+++ +R+ +V + IF LLSTRAGG G+NLT A
Sbjct: 1170 MMDLMEEYLTYRQHKYIRLDGSSKLDDRRDLVHDWQTKPEIFVFLLSTRAGGLGINLTAA 1229
Query: 61 DTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLILDAAV 120
DTV+ +D D+NP ID QA DR HR+GQTR VT+YRL+T+GT++E + + AK+K + V
Sbjct: 1230 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLTRGTIEERMRDRAKQKEQVQQVV 1289
Query: 121 LESGVEVDNEGDTSDK 136
+E + N+ ++ +K
Sbjct: 1290 MEGKSAIANKEESGNK 1305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,264,406
Number of Sequences: 539616
Number of extensions: 2117478
Number of successful extensions: 5546
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 5068
Number of HSP's gapped (non-prelim): 451
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)