BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032028
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S8F8|GEM_ARATH GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1
SV=1
Length = 299
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
Query: 1 MAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAF 60
M +IAQ TKVF EGGYEK+F+Q F E+LL ++ACY+STS GPV+G LYIS+ ++A+
Sbjct: 158 MGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAY 217
Query: 61 CSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMG 120
CSD PLS Y + Q EW Y+KVV+ L QL+ VNPSA+ NP+EKYI V++ D +EFWFMG
Sbjct: 218 CSDNPLS-YKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMG 276
Query: 121 FISYDKALKTLTEALR 136
F++YD A+ +L ++L+
Sbjct: 277 FLNYDGAVTSLQDSLQ 292
>sp|Q9SE96|GEML1_ARATH GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1
Length = 259
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
Query: 1 MAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAF 60
+++IAQGTK+ EGGYEKVF+Q F L EKLLK YACY+STS GPV+G +Y+ST ++AF
Sbjct: 121 VSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAF 180
Query: 61 CSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMG 120
SD PLS Y Q W Y+KVV+ +QL+ VNPS +R N S+KYI V++ D +EFWFMG
Sbjct: 181 SSDNPLS-YKEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMG 239
Query: 121 FISYDKALKTLTEALR 136
F++Y+ A+K+L EA++
Sbjct: 240 FVTYESAVKSLQEAVQ 255
>sp|Q9M122|GEML2_ARATH GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1
Length = 233
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 1 MAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAF 60
MA+++QGTK+ EGG E+VFQ+EF LA EKLL ++ CYIST++GPV G +YIS +R+AF
Sbjct: 89 MARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAF 148
Query: 61 CSDYPLSHYSSSGQQE-WVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFM 119
CSDY + SS+G Y+KVV++ +++ +++ S N PSE+Y+H+VTRDG+EFWFM
Sbjct: 149 CSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFM 208
Query: 120 GFISYDKALKTLTEAL 135
GF+SY A L +AL
Sbjct: 209 GFVSYIDAFNCLNKAL 224
>sp|Q9M063|GEML3_ARATH Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100
PE=3 SV=2
Length = 239
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 93/136 (68%), Gaps = 15/136 (11%)
Query: 1 MAKIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAF 60
M +IAQ TKV EGGYEK+F+Q F + E+L ++ACY+STS GPV+G LY+ST ++A+
Sbjct: 111 MGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAY 170
Query: 61 CSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMG 120
CSD L VV+ L QL++VNPS + NP+EKYI V++ D +EFWFMG
Sbjct: 171 CSDTSL---------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMG 215
Query: 121 FISYDKALKTLTEALR 136
F++Y+ A+ +L + L+
Sbjct: 216 FLNYEGAVTSLQDTLQ 231
>sp|Q9LYV6|GEML5_ARATH GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1
Length = 272
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 91/143 (63%)
Query: 3 KIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCS 62
K+ K T+GG+E +F+Q F E L K +ACY+ST+ GPV GT+Y+S R+AFCS
Sbjct: 128 KVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCS 187
Query: 63 DYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMGFI 122
D PL + SGQ+ W Y++VVV L + TVNP + P EKYI + T DG++FWFMGF+
Sbjct: 188 DRPLYFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFV 247
Query: 123 SYDKALKTLTEALRRFPDTSGGL 145
+Y+KA L ++ F G +
Sbjct: 248 NYEKATHHLLTSVSDFQTAHGSV 270
>sp|Q9FTA0|GEML4_ARATH GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1
Length = 222
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 88/133 (66%)
Query: 3 KIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCS 62
K++ G ++ GG EK+F++ F GEKL K Y CY+ST+ GP+ G L+IS+++MAFCS
Sbjct: 80 KLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCS 139
Query: 63 DYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMGFI 122
+ + S G V++KV + L ++ VN S N PS+KY+ VVT DG++FWFMGF+
Sbjct: 140 ERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFL 199
Query: 123 SYDKALKTLTEAL 135
SY KA L +AL
Sbjct: 200 SYQKAFNCLEKAL 212
>sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370
PE=3 SV=1
Length = 219
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 89/133 (66%)
Query: 3 KIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCS 62
K++ G ++ GG EK++++ F EKL KAY CY+ST+ GP+ G L+IS++++AFCS
Sbjct: 81 KLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCS 140
Query: 63 DYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMGFI 122
+ + S G+ V++KV + L ++ VN S N PS+KY+ VVT DG++FWFMGF+
Sbjct: 141 ERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFL 200
Query: 123 SYDKALKTLTEAL 135
SY KA L +AL
Sbjct: 201 SYQKAFNCLEQAL 213
>sp|Q9FMW6|GEML6_ARATH GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2
Length = 218
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 87/133 (65%)
Query: 3 KIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCS 62
K++ G K+ GG EK++++ F EKL KAY CY+ST+ GP+ G L+IS++++AFCS
Sbjct: 81 KLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCS 140
Query: 63 DYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMGFI 122
+ + S G V++KV + L ++ VN S N PS+KY+ +VT D ++FWFMGF+
Sbjct: 141 ERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFV 200
Query: 123 SYDKALKTLTEAL 135
SY KA L +AL
Sbjct: 201 SYQKAFNCLEKAL 213
>sp|Q9FMW5|GEML7_ARATH GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1
Length = 210
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 86/133 (64%)
Query: 3 KIAQGTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCS 62
K++ G K+ GG EK++++ F EKL KAY CY+ST+ G + G L+IS++++AFCS
Sbjct: 73 KLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCS 132
Query: 63 DYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWNPSEKYIHVVTRDGYEFWFMGFI 122
+ + S G V++KV + L ++ VN S N PS++Y+ VVT D Y+FWFMGF+
Sbjct: 133 ERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFV 192
Query: 123 SYDKALKTLTEAL 135
SY KA L +AL
Sbjct: 193 SYQKAFNCLEKAL 205
>sp|Q28PV9|ARGC_JANSC N-acetyl-gamma-glutamyl-phosphate reductase OS=Jannaschia sp.
(strain CCS1) GN=argC PE=3 SV=1
Length = 342
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 2 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRM 58
A++++GT + GG + F QEF K+AG K+ + +++ N ++ T Y+
Sbjct: 194 AELSEGTHAYALGGTHRHLGEFDQEFSKVAGRKVEVQFTPHLAPFNRGILATCYVKGDAQ 253
Query: 59 AF 60
A
Sbjct: 254 AI 255
>sp|Q6C8M8|ATG26_YARLI Sterol 3-beta-glucosyltransferase OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=ATG26 PE=3 SV=3
Length = 1456
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 20 FQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCS 62
FQ+ F E+L+ +Y C++ P G +Y+ST + F S
Sbjct: 829 FQKRFALGTEERLIASYHCHLHRGGIPTYGKMYVSTNYVTFRS 871
>sp|A3PK36|ARGC_RHOS1 N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=argC PE=3
SV=1
Length = 342
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 2 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYI 53
A++++GT ++ GG + F QEF K+AG + + +++ N ++ +Y+
Sbjct: 194 AELSEGTHAYSAGGRHRHLGEFDQEFSKIAGRPVQVRFTPHLTPMNRGILANVYV 248
>sp|B9KSY0|ARGC_RHOSK N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter
sphaeroides (strain KD131 / KCTC 12085) GN=argC PE=3
SV=1
Length = 342
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 2 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYI 53
A++++GT ++ GG + F QEF K+AG + + +++ N ++ +Y+
Sbjct: 194 AELSEGTHAYSAGGRHRHLGEFDQEFSKIAGRPVQVRFTPHLTPMNRGILANVYV 248
>sp|Q9FGS8|C2GR2_ARATH C2 and GRAM domain-containing protein At5g50170 OS=Arabidopsis
thaliana GN=At5g50170 PE=2 SV=1
Length = 1027
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 24/127 (18%)
Query: 20 FQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCSDYPLSHYSSSGQQEWVY 79
FQ+ F E LLK Y CY+ PV G L++S + +AF S+ G + Y
Sbjct: 694 FQKLFGLPHEEFLLKEYTCYLK-RKLPVQGKLFLSARIVAFYSNV-------FGHKTKFY 745
Query: 80 FKVVVDLDQLRTVNPS--------------ANRWNPSEKYIHVVTRDG-YEFWFMGFISY 124
F + D+D ++ + P+ NR ++ +G F+F F+S+
Sbjct: 746 F-LWEDIDDIQVLPPTFASLGSPLLLIILKKNRGLDAKHGAKSQDDEGRLSFYFQSFVSF 804
Query: 125 DKALKTL 131
D +T+
Sbjct: 805 DATSRTI 811
>sp|Q3J277|ARGC_RHOS4 N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=argC PE=3 SV=1
Length = 342
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 2 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYI 53
A++++GT ++ GG + F QEF K+AG + + +++ N ++ +Y+
Sbjct: 194 AELSEGTHAYSAGGRHRHLGEFDQEFSKIAGRPVQVRFTPHLTPMNRGILANVYV 248
>sp|Q55D51|FNTB_DICDI Protein farnesyltransferase subunit beta OS=Dictyostelium
discoideum GN=fntB PE=3 SV=1
Length = 500
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 41 STSNGPVIGTLYISTQRMAFCSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVNPSANRWN 100
ST NG +I I M P+SH + W+ F ++ +D L +++ N +
Sbjct: 49 STENGNIIEKKKILNFLMNGIEKIPMSHQGLDSSKVWISFWILNGMDMLDSLDSYPNISS 108
Query: 101 PSEKYIHVV 109
+ KY+ ++
Sbjct: 109 RASKYLSIL 117
>sp|P37782|RFBF_SHIFL dTDP-rhamnosyl transferase RfbF OS=Shigella flexneri GN=rfbF PE=3
SV=2
Length = 296
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 7 GTKVFTEGGYEKVFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYISTQRMAFCSDYPL 66
G + E G EK+ + + +K +CY+ N + G ++I + + YP+
Sbjct: 72 GIRYSLEKGAEKIIFFDQDSRIRNEFIKKLSCYMDNENAKIAGPVFIDRDKSHY---YPI 128
Query: 67 SHYSSSGQQEWVY 79
+ +G +E ++
Sbjct: 129 CNIKKNGLREKIH 141
>sp|A4WQY7|ARGC_RHOS5 N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter
sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=argC PE=3
SV=1
Length = 342
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 2 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYI 53
A++++GT ++ GG + F QEF K+AG + + +++ N ++ ++++
Sbjct: 194 AELSEGTHAYSAGGTHRHLGEFDQEFSKIAGRPVQVRFTPHLTPMNRGILASVHV 248
>sp|Q2QA02|VM3_CRODD Zinc metalloproteinase-disintegrin OS=Crotalus durissus durissus
PE=2 SV=1
Length = 609
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 6 QGTKVFTEGG----YEKVFQQEFHKLAGEKLLKAYA---CYISTSNG-PVIGTLYISTQR 57
QG+ + E G YE V+ ++ L + Y Y NG PV+ LY+ +
Sbjct: 17 QGSSIILESGNVNDYEIVYPRKVTALPKGAVQPKYEDAMQYELKVNGEPVV--LYLEKNK 74
Query: 58 MAFCSDYPLSHYSSSGQQEWVY 79
F DY +HYS G++ Y
Sbjct: 75 QLFSKDYSETHYSPDGREITTY 96
>sp|Q9IAY2|VM1H5_DEIAC Snake venom metalloproteinase H5 (Fragment) OS=Deinagkistrodon
acutus PE=1 SV=1
Length = 404
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 6 QGTKVFTEGG----YEKVFQQEFHKLAGEKLLKAYAC---YISTSNGPVIGTLYISTQRM 58
QG+ + E G YE V+ Q L + + Y Y NG IG L++ +
Sbjct: 4 QGSSIMLESGKVNDYEVVYPQRLAPLPEGAVQQKYEDTMQYEFKVNGETIG-LHMEKSKG 62
Query: 59 AFCSDYPLSHYSSSGQQEWVYFKV 82
F DY +HYS G++ Y V
Sbjct: 63 LFSKDYSETHYSPDGRKITTYPSV 86
>sp|Q9LA02|ARGC_RHOCB N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
GN=argC PE=3 SV=2
Length = 342
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 2 AKIAQGTKVFTEGGYEK---VFQQEFHKLAGEKLLKAYACYISTSNGPVIGTLYI 53
A++A GT ++ GG + F QEF K+AG + + ++ N ++ T+Y+
Sbjct: 194 AELAGGTMPYSAGGKHRHLGEFDQEFSKVAGRPVRVQFTPHLMPFNRGILATVYV 248
>sp|A6VXD7|TOLB_MARMS Protein TolB OS=Marinomonas sp. (strain MWYL1) GN=tolB PE=3 SV=1
Length = 432
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 34 KAYACYISTSNGPVIGTLYISTQRMAFCSDYPLSHYSSSGQQEWVYFKVVVDLDQLRTVN 93
K A +S N P I TL I+TQ++ ++ HY+ + W + R N
Sbjct: 257 KKLALVLSKDNNPEIYTLDIATQKLERMTN----HYAIDTEPSWEPDGKGIVFTSDRGGN 312
Query: 94 PSANRWNPSEKYIHVVTRDG 113
P R + + K + VT +G
Sbjct: 313 PQIYRLDVNSKRVERVTFEG 332
>sp|C9E1R8|VM3V3_CROVV Zinc metalloproteinase-disintegrin VMP-III OS=Crotalus viridis
viridis PE=2 SV=1
Length = 609
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Query: 6 QGTKVFTEGG----YEKVFQQEFHKL----AGEKLLKAYACYISTSNGPVIGTLYISTQR 57
QG+ + E G YE V+ ++ L K A + S PV+ L++ +
Sbjct: 17 QGSSIILESGNVNDYEIVYPRKVTALPKGAVQPKYEDAMQYELKVSGEPVV--LHLEKNK 74
Query: 58 MAFCSDYPLSHYSSSGQQEWVY 79
F DY +HYS G++ Y
Sbjct: 75 QLFSKDYSETHYSPDGREITTY 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,936,956
Number of Sequences: 539616
Number of extensions: 2182415
Number of successful extensions: 4551
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 4534
Number of HSP's gapped (non-prelim): 35
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)