Query 032035
Match_columns 148
No_of_seqs 132 out of 187
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 13:57:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032035.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032035hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ebfx3 d.3.1.17 (X:1094-1285) 25.7 15 0.0011 26.8 1.9 22 124-145 38-59 (192)
2 d1ow5a_ a.60.1.2 (A:) Serine/t 24.9 20 0.0014 20.9 2.1 40 103-142 1-60 (60)
3 d1v54j_ f.23.4.1 (J:) Mitochon 17.7 34 0.0025 20.9 2.1 15 110-124 39-53 (58)
4 d1ciya3 f.1.3.1 (A:33-255) del 13.8 86 0.0063 22.5 3.9 46 89-143 8-53 (223)
5 d2zjre1 d.141.1.1 (E:83-172) R 12.9 6.3 0.00046 26.1 -2.6 10 109-118 5-14 (90)
6 d1s0ya_ d.80.1.1 (A:) Trans-3- 12.2 52 0.0038 19.0 1.8 21 127-147 12-32 (62)
7 d2j01h2 d.141.1.1 (H:83-171) R 11.4 6.8 0.00049 25.9 -2.9 13 108-120 4-16 (89)
8 d1gyxa_ d.80.1.1 (A:) 4-oxaloc 11.4 55 0.004 20.3 1.8 21 127-147 13-33 (76)
9 d1rl6a2 d.141.1.1 (A:82-170) R 11.3 7.2 0.00052 25.7 -2.8 9 109-117 5-13 (89)
10 d1i5pa3 f.1.3.1 (A:1-263) delt 11.0 1.1E+02 0.0078 22.8 3.8 24 94-117 60-83 (263)
No 1
>d2ebfx3 d.3.1.17 (X:1094-1285) Dermonecrotic toxin, ToxA {Pasteurella multocida [TaxId: 747]}
Probab=25.68 E-value=15 Score=26.77 Aligned_cols=22 Identities=32% Similarity=0.321 Sum_probs=17.9
Q ss_pred hccccccHHHHHHHHHHhhhhh
Q 032035 124 YLLFKPDREELFQIINKSVSDI 145 (148)
Q Consensus 124 yLL~~~~R~eL~~~i~~~k~~I 145 (148)
|-+..+-|+||.+||+.+|+++
T Consensus 38 nsvsedlreelmqkidaikndv 59 (192)
T d2ebfx3 38 NSVSEDLREELMQKIDAIKNDV 59 (192)
T ss_dssp TTSCHHHHHHHHHHHHHHHTCH
T ss_pred hhhhHHHHHHHHHHHHHHhccc
Confidence 4455667999999999999876
No 2
>d1ow5a_ a.60.1.2 (A:) Serine/threonine-protein kinase ste11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.92 E-value=20 Score=20.85 Aligned_cols=40 Identities=20% Similarity=0.188 Sum_probs=26.2
Q ss_pred CCchhHHHHHHHH-HHhhhhHhh-c------------------cccccHHHHHHHHHHhh
Q 032035 103 PIIPNALELIGIL-FSTWFVYRY-L------------------LFKPDREELFQIINKSV 142 (148)
Q Consensus 103 PLlp~llELVGig-yt~WFvyRy-L------------------L~~~~R~eL~~~i~~~k 142 (148)
|.+...|+=+|+. |.--|.-.+ . ..-..|..++.+|+.++
T Consensus 1 p~V~~wL~~lgL~~Y~~~F~~~~~i~~~~l~~l~~~dL~~lGI~~~ghr~ril~~i~~Lk 60 (60)
T d1ow5a_ 1 PFVQLFLEEIGCTQYLDSFIQCNLVTEEEIKYLDKDILIALGVNKIGDRLKILRKSKSFQ 60 (60)
T ss_dssp CHHHHHHHHHSCTHHHHHHHHHTCCCHHHHHHCCHHHHHHHTCCCHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHCcCHHHHHHHHHcCCCcHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHhC
Confidence 5667777777777 777776643 2 23357777777777653
No 3
>d1v54j_ f.23.4.1 (J:) Mitochondrial cytochrome c oxidase subunit VIIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=17.67 E-value=34 Score=20.94 Aligned_cols=15 Identities=27% Similarity=0.220 Sum_probs=12.0
Q ss_pred HHHHHHHHhhhhHhh
Q 032035 110 ELIGILFSTWFVYRY 124 (148)
Q Consensus 110 ELVGigyt~WFvyRy 124 (148)
=++|++|+.|+.|..
T Consensus 39 ~~~G~~~s~~~l~~a 53 (58)
T d1v54j_ 39 CLGGTLYSLYCLGWA 53 (58)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 478999999988753
No 4
>d1ciya3 f.1.3.1 (A:33-255) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=13.76 E-value=86 Score=22.49 Aligned_cols=46 Identities=15% Similarity=0.243 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhhccCCchhHHHHHHHHHHhhhhHhhccccccHHHHHHHHHHhhh
Q 032035 89 LWASVNLITAIDKLPIIPNALELIGILFSTWFVYRYLLFKPDREELFQIINKSVS 143 (148)
Q Consensus 89 l~~~~~vl~AId~iPLlp~llELVGigyt~WFvyRyLL~~~~R~eL~~~i~~~k~ 143 (148)
+-+++.+++.. +|..+.++-++|++|-. ..++.=+++.+.++++.+
T Consensus 8 ~~~~~~ll~~~--iP~~g~~~~li~~lwp~-------~~~~~W~~~~~~ve~LId 53 (223)
T d1ciya3 8 LSLTQFLLSEF--VPGAGFVLGLVDIIWGI-------FGPSQWDAFLVQIEQLIN 53 (223)
T ss_dssp HHHHHHHHHCC--SSSHHHHHHHHHHTTSC-------CSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhc--CCchHHHHHHHHHHcCC-------CCccHHHHHHHHHHHHHH
Confidence 33444445444 88888887777776531 112334666666666653
No 5
>d2zjre1 d.141.1.1 (E:83-172) Ribosomal protein L6 {Deinococcus radiodurans [TaxId: 1299]}
Probab=12.87 E-value=6.3 Score=26.08 Aligned_cols=10 Identities=50% Similarity=0.730 Sum_probs=6.6
Q ss_pred HHHHHHHHHh
Q 032035 109 LELIGILFST 118 (148)
Q Consensus 109 lELVGigyt~ 118 (148)
|||+|+||=+
T Consensus 5 L~lvGVGYra 14 (90)
T d2zjre1 5 LELRGVGFRA 14 (90)
T ss_dssp EECBSTTCCC
T ss_pred EEEEEEEEEE
Confidence 5677777754
No 6
>d1s0ya_ d.80.1.1 (A:) Trans-3-chloroacrylic acid dehalogenase alpha-subunit, CaaD1 {Pseudomonas pavonaceae [TaxId: 47881]}
Probab=12.16 E-value=52 Score=19.01 Aligned_cols=21 Identities=14% Similarity=0.197 Sum_probs=17.9
Q ss_pred ccccHHHHHHHHHHhhhhhcC
Q 032035 127 FKPDREELFQIINKSVSDILG 147 (148)
Q Consensus 127 ~~~~R~eL~~~i~~~k~~I~G 147 (148)
-.+.|++|.+.|.+...+++|
T Consensus 12 t~eqK~~l~~~it~~~~~~~g 32 (62)
T d1s0ya_ 12 TDEQKRALSAGLLRVISEATG 32 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHhC
Confidence 356789999999999988887
No 7
>d2j01h2 d.141.1.1 (H:83-171) Ribosomal protein L6 {Thermus thermophilus [TaxId: 274]}
Probab=11.40 E-value=6.8 Score=25.91 Aligned_cols=13 Identities=23% Similarity=0.360 Sum_probs=8.8
Q ss_pred HHHHHHHHHHhhh
Q 032035 108 ALELIGILFSTWF 120 (148)
Q Consensus 108 llELVGigyt~WF 120 (148)
-|||+|+||=+.-
T Consensus 4 ~LelvGVGYra~~ 16 (89)
T d2j01h2 4 ELLIKGIGYRARL 16 (89)
T ss_dssp EECCCSSSCEECC
T ss_pred EEEEEEEEEEEEE
Confidence 3678888886543
No 8
>d1gyxa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase homologue YdcE {Escherichia coli [TaxId: 562]}
Probab=11.38 E-value=55 Score=20.30 Aligned_cols=21 Identities=14% Similarity=0.082 Sum_probs=18.4
Q ss_pred ccccHHHHHHHHHHhhhhhcC
Q 032035 127 FKPDREELFQIINKSVSDILG 147 (148)
Q Consensus 127 ~~~~R~eL~~~i~~~k~~I~G 147 (148)
..+.+++|.++|.+...+++|
T Consensus 13 T~EQK~~L~~~iT~a~~~~lg 33 (76)
T d1gyxa_ 13 DEQQKAALAADITDVIIRHLN 33 (76)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHhC
Confidence 457789999999999999887
No 9
>d1rl6a2 d.141.1.1 (A:82-170) Ribosomal protein L6 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=11.30 E-value=7.2 Score=25.75 Aligned_cols=9 Identities=44% Similarity=0.921 Sum_probs=5.4
Q ss_pred HHHHHHHHH
Q 032035 109 LELIGILFS 117 (148)
Q Consensus 109 lELVGigyt 117 (148)
||++|+||=
T Consensus 5 L~lvGVGYr 13 (89)
T d1rl6a2 5 LELVGVGYR 13 (89)
T ss_dssp EEEESTTCE
T ss_pred EEEEEEEEE
Confidence 466666663
No 10
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]}
Probab=11.02 E-value=1.1e+02 Score=22.77 Aligned_cols=24 Identities=29% Similarity=0.295 Sum_probs=12.5
Q ss_pred HHHHHhhccCCchhHHHHHHHHHH
Q 032035 94 NLITAIDKLPIIPNALELIGILFS 117 (148)
Q Consensus 94 ~vl~AId~iPLlp~llELVGigyt 117 (148)
.++.++-.+..-+-+-.++|+.|-
T Consensus 60 ~l~~~l~~~~~~~ils~l~~~lwP 83 (263)
T d1i5pa3 60 FLLKKVGSLIGKRILSELWGIIFP 83 (263)
T ss_dssp HHHHHHTSTTCCCCHHHHHHHHSG
T ss_pred HHHHhhhhHhHHHHHHHHHHHHcC
Confidence 344444333333345577887764
Done!