Query 032036
Match_columns 148
No_of_seqs 163 out of 1039
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 13:58:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kvn_X Esterase ESTA; beta bar 99.9 2.9E-26 9.9E-31 197.8 6.8 118 7-144 208-327 (632)
2 1yzf_A Lipase/acylhydrolase; s 97.7 3.3E-05 1.1E-09 55.0 5.0 25 106-130 161-185 (195)
3 3mil_A Isoamyl acetate-hydroly 97.7 4.1E-05 1.4E-09 56.5 5.1 67 10-130 140-206 (240)
4 2hsj_A Putative platelet activ 97.7 0.00027 9.1E-09 51.4 8.8 29 19-47 105-133 (214)
5 1fxw_F Alpha2, platelet-activa 97.6 0.00024 8.1E-09 52.8 8.0 87 18-130 111-212 (229)
6 3rjt_A Lipolytic protein G-D-S 97.4 0.00013 4.5E-09 52.7 4.6 66 12-130 147-212 (216)
7 2vpt_A Lipolytic enzyme; ester 97.4 0.00012 4E-09 53.9 3.8 27 103-129 167-193 (215)
8 1es9_A PAF-AH, platelet-activa 97.3 0.0011 3.6E-08 49.1 8.6 30 18-47 110-139 (232)
9 1esc_A Esterase; 2.10A {Strept 97.3 0.0022 7.5E-08 49.9 10.3 32 15-46 155-186 (306)
10 3dc7_A Putative uncharacterize 97.1 0.00059 2E-08 50.4 4.5 24 106-129 195-218 (232)
11 4h08_A Putative hydrolase; GDS 96.9 0.0016 5.6E-08 46.9 5.9 28 19-46 92-119 (200)
12 3p94_A GDSL-like lipase; serin 96.6 0.0011 3.7E-08 47.5 2.6 25 105-129 173-197 (204)
13 1vjg_A Putative lipase from th 96.3 0.0011 3.9E-08 48.4 1.2 23 107-129 187-209 (218)
14 3dci_A Arylesterase; SGNH_hydr 96.2 0.013 4.3E-07 43.3 6.7 29 18-46 122-155 (232)
15 3hp4_A GDSL-esterase; psychrot 96.1 0.0016 5.5E-08 46.1 1.2 25 105-129 152-176 (185)
16 3skv_A SSFX3; jelly roll, GDSL 96.0 0.018 6.2E-07 46.8 7.3 29 19-47 264-292 (385)
17 1ivn_A Thioesterase I; hydrola 95.8 0.0022 7.4E-08 45.8 1.0 26 105-130 148-173 (190)
18 4hf7_A Putative acylhydrolase; 95.8 0.0037 1.3E-07 45.7 2.2 24 106-129 180-203 (209)
19 2wao_A Endoglucanase E; plant 95.8 0.047 1.6E-06 43.0 8.7 28 18-45 233-260 (341)
20 2q0q_A ARYL esterase; SGNH hyd 95.5 0.005 1.7E-07 44.5 1.8 22 108-129 189-210 (216)
21 2waa_A Acetyl esterase, xylan 95.4 0.048 1.7E-06 43.2 7.5 28 18-45 245-272 (347)
22 3bzw_A Putative lipase; protei 94.8 0.056 1.9E-06 40.9 5.8 27 20-46 142-168 (274)
23 2w9x_A AXE2A, CJCE2B, putative 94.2 0.21 7.1E-06 39.8 8.2 28 18-45 266-293 (366)
24 1k7c_A Rhamnogalacturonan acet 92.8 0.04 1.4E-06 40.9 1.7 22 109-130 190-211 (233)
25 2o14_A Hypothetical protein YX 92.1 0.062 2.1E-06 43.2 2.1 24 107-130 335-358 (375)
26 4i8i_A Hypothetical protein; 5 87.9 0.13 4.4E-06 39.8 0.6 31 104-134 195-226 (271)
27 3evi_A Phosducin-like protein 50.8 20 0.00069 23.4 4.0 35 23-64 39-73 (118)
28 3bma_A D-alanyl-lipoteichoic a 40.2 10 0.00035 31.0 1.4 24 105-128 342-365 (407)
29 2apj_A Putative esterase; AT4G 38.6 15 0.00052 27.8 2.1 30 18-47 170-201 (260)
30 1zmb_A Acetylxylan esterase re 34.5 19 0.00065 27.7 2.1 32 18-49 128-161 (290)
31 3iz5_R 60S ribosomal protein L 31.7 32 0.0011 25.0 2.8 29 118-146 43-71 (188)
32 3izc_R 60S ribosomal protein R 28.4 30 0.001 25.1 2.1 29 118-146 43-71 (186)
33 4a17_N RPL18, 60S ribosomal pr 28.2 25 0.00086 25.5 1.7 29 118-146 44-72 (181)
34 4h0p_A Acetate kinase; askha ( 28.0 67 0.0023 26.4 4.3 36 11-46 124-160 (438)
35 4g3o_A E3 ubiquitin-protein li 27.8 65 0.0022 18.8 3.1 21 19-39 11-31 (58)
36 3vmk_A 3-isopropylmalate dehyd 25.1 1.1E+02 0.0036 24.6 5.0 39 23-61 212-250 (375)
37 3r8w_A 3-isopropylmalate dehyd 25.1 1.1E+02 0.0037 24.9 5.1 39 23-61 240-278 (405)
38 1w0d_A 3-isopropylmalate dehyd 24.8 1E+02 0.0035 24.3 4.8 38 24-61 189-226 (337)
39 3blx_B Isocitrate dehydrogenas 24.4 1.1E+02 0.0039 24.3 5.0 38 24-61 199-236 (354)
40 3udu_A 3-isopropylmalate dehyd 24.2 1.2E+02 0.0041 24.2 5.1 39 23-61 200-238 (361)
41 2y3z_A 3-isopropylmalate dehyd 24.1 1.1E+02 0.0037 24.4 4.8 38 24-61 197-234 (359)
42 3jyw_O 60S ribosomal protein L 23.5 38 0.0013 22.8 1.8 29 118-146 23-51 (121)
43 1x0l_A Homoisocitrate dehydrog 23.1 1.2E+02 0.004 23.9 4.8 38 24-61 180-217 (333)
44 1vlc_A 3-isopropylmalate dehyd 22.9 1.2E+02 0.004 24.3 4.8 38 24-61 208-245 (366)
45 1cnz_A IPMDH, IMDH, protein (3 22.6 1.2E+02 0.0041 24.2 4.8 38 24-61 204-241 (363)
46 1a05_A IPMDH, IMDH, 3-isopropy 22.5 1.3E+02 0.0043 24.0 4.9 38 24-61 199-236 (358)
47 3u1h_A 3-isopropylmalate dehyd 22.4 1.3E+02 0.0044 24.3 5.0 39 23-61 219-257 (390)
48 1ego_A Glutaredoxin; electron 22.2 70 0.0024 18.4 2.8 25 24-48 16-40 (85)
49 3flk_A Tartrate dehydrogenase/ 22.0 1.3E+02 0.0046 23.9 5.0 37 25-61 203-239 (364)
50 3f3q_A Thioredoxin-1; His TAG, 21.9 1.2E+02 0.0042 18.4 4.0 25 24-48 41-65 (109)
51 3m9j_A Thioredoxin; oxidoreduc 21.7 1.3E+02 0.0043 17.7 4.0 25 24-48 37-61 (105)
52 3blx_A Isocitrate dehydrogenas 21.6 1.4E+02 0.005 23.6 5.1 37 25-61 194-231 (349)
53 3fxt_A Nucleoside diphosphate- 20.1 1.2E+02 0.0043 20.0 3.8 45 18-64 50-94 (113)
No 1
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa}
Probab=99.92 E-value=2.9e-26 Score=197.82 Aligned_cols=118 Identities=18% Similarity=0.203 Sum_probs=99.0
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcCCCCCc--ccccCCCccccccCccCC
Q 032036 7 DHGCATPFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLGFENPL--LACCGHGGKYNYDKNRKC 84 (148)
Q Consensus 7 ~~~C~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yGf~n~~--~~Cc~~gg~~~~~~~~~C 84 (148)
..+|.+.+|.++..||.+|+++|++|+ .+|+++|+|+++.++++||++|||+++. ++||+.| ..|
T Consensus 208 ~~~c~~~~n~~~~~~N~~L~~~l~~l~-----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g--------~~C 274 (632)
T 3kvn_X 208 GGPLQPFASQLSGTFNAELTAQLSQAG-----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSG--------NGC 274 (632)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSC--------TTS
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhCC-----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCC--------Ccc
Confidence 468999999999999999999999995 4899999999999999999999999864 6999865 268
Q ss_pred CCccccCCcccccccccCCCCcceeecCCChhHHHHHHHHHHHHhCCCCCCCCchhhhhc
Q 032036 85 GSKVTVNGKEIMVAKSCKVPAVRINWDGVHYTEAANKWVYDQIINGSYSDPPIPMEMACR 144 (148)
Q Consensus 85 ~~~~~~~g~~~~~~~~C~~p~~y~fwD~~HPT~~~h~~iA~~~~~~~~~~~p~~~~~~~~ 144 (148)
++.... + ... +|+||++|+|||++||||++|++||+.++++. ..|+++++|..
T Consensus 275 ~~~~~~-~---~~~-~C~~~~~y~fwD~~HpTe~~~~~ia~~~~~~~--~~P~~~~~l~~ 327 (632)
T 3kvn_X 275 TMNPTY-G---ING-STPDPSKLLFNDSVHPTITGQRLIADYTYSLL--SAPWELTLLPE 327 (632)
T ss_dssp CBCTTT-S---TTS-SSCCGGGCSBSSSSCBCHHHHHHHHHHHHHHH--HTHHHHTTHHH
T ss_pred CCcccc-c---ccc-cCCCccceEEecCCCCHHHHHHHHHHHHHhcc--CCCccHHHHHH
Confidence 763110 1 024 89999999999999999999999999999863 24577777653
No 2
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=97.75 E-value=3.3e-05 Score=55.01 Aligned_cols=25 Identities=16% Similarity=0.327 Sum_probs=22.4
Q ss_pred cceeecCCChhHHHHHHHHHHHHhC
Q 032036 106 VRINWDGVHYTEAANKWVYDQIING 130 (148)
Q Consensus 106 ~y~fwD~~HPT~~~h~~iA~~~~~~ 130 (148)
.+++||++|||+++|+++|+.++..
T Consensus 161 ~~~~~Dg~Hp~~~G~~~~a~~i~~~ 185 (195)
T 1yzf_A 161 EFLQADGLHFSQVGYELLGALIVRE 185 (195)
T ss_dssp GGBCTTSSSBCHHHHHHHHHHHHHH
T ss_pred ccccCCCCCcCHHHHHHHHHHHHHH
Confidence 5688999999999999999998763
No 3
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=97.71 E-value=4.1e-05 Score=56.50 Aligned_cols=67 Identities=12% Similarity=0.113 Sum_probs=48.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcCCCCCcccccCCCccccccCccCCCCccc
Q 032036 10 CATPFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLGFENPLLACCGHGGKYNYDKNRKCGSKVT 89 (148)
Q Consensus 10 C~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yGf~n~~~~Cc~~gg~~~~~~~~~C~~~~~ 89 (148)
|....|.....||+.+++...+. .+.++|+++.+.+...+ .
T Consensus 140 ~~~~~~~~~~~~n~~~~~~a~~~-------~v~~vD~~~~~~~~~~~------------------~-------------- 180 (240)
T 3mil_A 140 GYFRTNENFAIYSDALAKLANEE-------KVPFVALNKAFQQEGGD------------------A-------------- 180 (240)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHT-------TCCEECHHHHHHHHHGG------------------G--------------
T ss_pred cccchHHHHHHHHHHHHHHHHHh-------CCeEEehHHHHhhcCCc------------------c--------------
Confidence 34556788888998888876543 35677988877653210 0
Q ss_pred cCCcccccccccCCCCcceeecCCChhHHHHHHHHHHHHhC
Q 032036 90 VNGKEIMVAKSCKVPAVRINWDGVHYTEAANKWVYDQIING 130 (148)
Q Consensus 90 ~~g~~~~~~~~C~~p~~y~fwD~~HPT~~~h~~iA~~~~~~ 130 (148)
.++++||++|||+++|++||+.+++.
T Consensus 181 ---------------~~~~~~Dg~Hpn~~G~~~~a~~l~~~ 206 (240)
T 3mil_A 181 ---------------WQQLLTDGLHFSGKGYKIFHDELLKV 206 (240)
T ss_dssp ---------------GGGGBSSSSSBCHHHHHHHHHHHHHH
T ss_pred ---------------HhhccCCCCCcCHHHHHHHHHHHHHH
Confidence 12468999999999999999998864
No 4
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=97.66 E-value=0.00027 Score=51.39 Aligned_cols=29 Identities=21% Similarity=0.376 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEecc
Q 032036 19 RFFNSRLKAAVVQLRKDLPLAAMTYVDIF 47 (148)
Q Consensus 19 ~~fN~~L~~~l~~l~~~~~~~~i~~~D~~ 47 (148)
..|-..|.++++.+++..|+.+|+++.+.
T Consensus 105 ~~~~~~l~~~i~~l~~~~p~~~iil~~~~ 133 (214)
T 2hsj_A 105 NEALNNLEAIIQSVARDYPLTEIKLLSIL 133 (214)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 55778899999999999999999988765
No 5
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=97.61 E-value=0.00024 Score=52.77 Aligned_cols=87 Identities=11% Similarity=0.050 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEEeccHH-------------HHHHHHhhhhcCCCCCcccccC-CCccc-cccCcc
Q 032036 18 ARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSV-------------KHSLITQAKKLGFENPLLACCG-HGGKY-NYDKNR 82 (148)
Q Consensus 18 ~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~-------------~~~vi~~P~~yGf~n~~~~Cc~-~gg~~-~~~~~~ 82 (148)
.+.|-..|.++++.+++..|+.+|+++.+... +++++.. .|-. .+-.+ .. ...
T Consensus 111 ~~~~~~~l~~~i~~l~~~~p~~~iil~~~~p~~~~~~~~~~~~~~~n~~l~~-----------~a~~~~~v~~iD~-~~~ 178 (229)
T 1fxw_F 111 AEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKV-----------SLPKLANVQLLDT-DGG 178 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCSSSCCHHHHHHHHHHHHHHH-----------HSSSSSSEEEECC-CCS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCCCCCchhhHHHHHHHHHHHHHH-----------HHhcCCCeEEEeC-HHH
Confidence 35667788999999999999999998765331 1222221 1110 01000 00 001
Q ss_pred CCCCccccCCcccccccccCCCCcceeecCCChhHHHHHHHHHHHHhC
Q 032036 83 KCGSKVTVNGKEIMVAKSCKVPAVRINWDGVHYTEAANKWVYDQIING 130 (148)
Q Consensus 83 ~C~~~~~~~g~~~~~~~~C~~p~~y~fwD~~HPT~~~h~~iA~~~~~~ 130 (148)
++. .......++++|++|||+++|++||+.+...
T Consensus 179 ~~~--------------~~g~~~~~~~~DgvHpn~~G~~~~a~~l~~~ 212 (229)
T 1fxw_F 179 FVH--------------SDGAISCHDMFDFLHLTGGGYAKICKPLHEL 212 (229)
T ss_dssp CBC--------------TTSCBCTTTBTTSSSBCHHHHHHHHHHHHHH
T ss_pred hhc--------------cCCCcchhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 111 1112344678999999999999999998753
No 6
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=97.45 E-value=0.00013 Score=52.68 Aligned_cols=66 Identities=11% Similarity=0.157 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcCCCCCcccccCCCccccccCccCCCCccccC
Q 032036 12 TPFNDVARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLGFENPLLACCGHGGKYNYDKNRKCGSKVTVN 91 (148)
Q Consensus 12 ~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yGf~n~~~~Cc~~gg~~~~~~~~~C~~~~~~~ 91 (148)
..++.....||+.+++..++. .+.++|++..+.+... .
T Consensus 147 ~~~~~~~~~~n~~~~~~a~~~-------~~~~vD~~~~~~~~~~-----------------~------------------ 184 (216)
T 3rjt_A 147 DPMRKTVDAYIEAMRDVAASE-------HVPFVDVQAEFDRLLA-----------------H------------------ 184 (216)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-------TCCEECHHHHHHHHHT-----------------T------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHc-------CCeEEEcHHHHHHHHh-----------------c------------------
Confidence 346777778888777766554 2567788777765430 0
Q ss_pred CcccccccccCCCCcceeecCCChhHHHHHHHHHHHHhC
Q 032036 92 GKEIMVAKSCKVPAVRINWDGVHYTEAANKWVYDQIING 130 (148)
Q Consensus 92 g~~~~~~~~C~~p~~y~fwD~~HPT~~~h~~iA~~~~~~ 130 (148)
....++++|++|||+++|++||+.+++.
T Consensus 185 -----------~~~~~~~~Dg~Hpn~~G~~~~a~~l~~~ 212 (216)
T 3rjt_A 185 -----------LNTWVLAPDRVHPYLNGHLVIARAFLTA 212 (216)
T ss_dssp -----------SCHHHHCSSSSSCCHHHHHHHHHHHHHH
T ss_pred -----------CCCcccccCCcCCChHHHHHHHHHHHHH
Confidence 0013577899999999999999999763
No 7
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=97.40 E-value=0.00012 Score=53.90 Aligned_cols=27 Identities=26% Similarity=0.451 Sum_probs=23.5
Q ss_pred CCCcceeecCCChhHHHHHHHHHHHHh
Q 032036 103 VPAVRINWDGVHYTEAANKWVYDQIIN 129 (148)
Q Consensus 103 ~p~~y~fwD~~HPT~~~h~~iA~~~~~ 129 (148)
++..++++|++||++++|++||+.++.
T Consensus 167 ~~~~~~~~Dg~Hpn~~G~~~~a~~i~~ 193 (215)
T 2vpt_A 167 DRNTDISWDGLHLSEIGYKKIANIWYK 193 (215)
T ss_dssp CHHHHBCTTSSSBCHHHHHHHHHHHHH
T ss_pred CccccccCCCCCcCHHHHHHHHHHHHH
Confidence 334678999999999999999999875
No 8
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=97.34 E-value=0.0011 Score=49.13 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEEecc
Q 032036 18 ARFFNSRLKAAVVQLRKDLPLAAMTYVDIF 47 (148)
Q Consensus 18 ~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~ 47 (148)
.+.|-..|.++++.++++.|+.+|+++.+.
T Consensus 110 ~~~~~~~l~~~i~~l~~~~p~~~ii~~~~~ 139 (232)
T 1es9_A 110 AEQVTGGIKAIVQLVNERQPQARVVVLGLL 139 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEecCC
Confidence 355667889999999999999999998664
No 9
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A
Probab=97.29 E-value=0.0022 Score=49.88 Aligned_cols=32 Identities=16% Similarity=0.079 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcEEEEEec
Q 032036 15 NDVARFFNSRLKAAVVQLRKDLPLAAMTYVDI 46 (148)
Q Consensus 15 n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~ 46 (148)
......+=..|.++|++++++.|+++|+++..
T Consensus 155 ~~~~~~~~~~l~~il~~ir~~~p~a~I~lvgy 186 (306)
T 1esc_A 155 DDQFERVGAELEELLDRIGYFAPDAKRVLVGY 186 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 33445677899999999999999999999843
No 10
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=97.05 E-value=0.00059 Score=50.39 Aligned_cols=24 Identities=13% Similarity=0.184 Sum_probs=21.9
Q ss_pred cceeecCCChhHHHHHHHHHHHHh
Q 032036 106 VRINWDGVHYTEAANKWVYDQIIN 129 (148)
Q Consensus 106 ~y~fwD~~HPT~~~h~~iA~~~~~ 129 (148)
.+++.|++||+++||++||+.+.+
T Consensus 195 ~~~~~DgvHpn~~G~~~iA~~i~~ 218 (232)
T 3dc7_A 195 AIYSVDTLHPNNAGHRVIARKLQS 218 (232)
T ss_dssp HHHBSSSSSBCHHHHHHHHHHHHH
T ss_pred hhccCCCCCCCHHHHHHHHHHHHH
Confidence 567999999999999999999875
No 11
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=96.93 E-value=0.0016 Score=46.93 Aligned_cols=28 Identities=14% Similarity=0.301 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEec
Q 032036 19 RFFNSRLKAAVVQLRKDLPLAAMTYVDI 46 (148)
Q Consensus 19 ~~fN~~L~~~l~~l~~~~~~~~i~~~D~ 46 (148)
+.|-+.|+++++.+++..|+..++++-+
T Consensus 92 ~~~~~~l~~ii~~l~~~~p~~~ii~~~~ 119 (200)
T 4h08_A 92 EEYDKSFPKLIKIIRKYAPKAKLIWANT 119 (200)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHhhhCCCccEEEecc
Confidence 5677889999999999999999887654
No 12
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=96.56 E-value=0.0011 Score=47.52 Aligned_cols=25 Identities=24% Similarity=0.308 Sum_probs=22.1
Q ss_pred CcceeecCCChhHHHHHHHHHHHHh
Q 032036 105 AVRINWDGVHYTEAANKWVYDQIIN 129 (148)
Q Consensus 105 ~~y~fwD~~HPT~~~h~~iA~~~~~ 129 (148)
..++++|++|||+++|++||+.+..
T Consensus 173 ~~~~~~Dg~Hp~~~G~~~~a~~l~~ 197 (204)
T 3p94_A 173 PANLSKDGVHPTLEGYKIMEKIVLE 197 (204)
T ss_dssp CTTTBSSSSSBCHHHHHHHHHHHHH
T ss_pred cccccCCCCCcCHHHHHHHHHHHHH
Confidence 3467999999999999999999875
No 13
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=96.27 E-value=0.0011 Score=48.36 Aligned_cols=23 Identities=22% Similarity=0.094 Sum_probs=20.6
Q ss_pred ceeecCCChhHHHHHHHHHHHHh
Q 032036 107 RINWDGVHYTEAANKWVYDQIIN 129 (148)
Q Consensus 107 y~fwD~~HPT~~~h~~iA~~~~~ 129 (148)
|+.||++|||+++|++||+.+++
T Consensus 187 ~~~~DgvHpn~~G~~~~A~~i~~ 209 (218)
T 1vjg_A 187 AKANDGVHPQAGGYTEFARIVEN 209 (218)
T ss_dssp HHHTTSSCCCHHHHHHHHHHHHT
T ss_pred ccccCCCCCCHHHHHHHHHHHHc
Confidence 45579999999999999999986
No 14
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=96.21 E-value=0.013 Score=43.33 Aligned_cols=29 Identities=10% Similarity=0.020 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHhC-----CCcEEEEEec
Q 032036 18 ARFFNSRLKAAVVQLRKDL-----PLAAMTYVDI 46 (148)
Q Consensus 18 ~~~fN~~L~~~l~~l~~~~-----~~~~i~~~D~ 46 (148)
...|=..|.++|+.+++.. |+.+|+++-.
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p 155 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAP 155 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeC
Confidence 4567788899999999887 8999998854
No 15
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=96.09 E-value=0.0016 Score=46.06 Aligned_cols=25 Identities=16% Similarity=0.271 Sum_probs=22.1
Q ss_pred CcceeecCCChhHHHHHHHHHHHHh
Q 032036 105 AVRINWDGVHYTEAANKWVYDQIIN 129 (148)
Q Consensus 105 ~~y~fwD~~HPT~~~h~~iA~~~~~ 129 (148)
.+++.+|++||++++|++||+.+..
T Consensus 152 ~~~~~~Dg~Hpn~~G~~~~a~~l~~ 176 (185)
T 3hp4_A 152 SDLMQNDSLHPNKKAQPLIRDEMYD 176 (185)
T ss_dssp GGGBCTTSSSBCTTHHHHHHHHHHH
T ss_pred cccccCCCCCcCHHHHHHHHHHHHH
Confidence 3567899999999999999999874
No 16
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=96.03 E-value=0.018 Score=46.78 Aligned_cols=29 Identities=21% Similarity=0.214 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEecc
Q 032036 19 RFFNSRLKAAVVQLRKDLPLAAMTYVDIF 47 (148)
Q Consensus 19 ~~fN~~L~~~l~~l~~~~~~~~i~~~D~~ 47 (148)
+.|-..|.++++.+++++|+..|+++-..
T Consensus 264 ~~~~~~l~~li~~ir~~~P~a~Illv~p~ 292 (385)
T 3skv_A 264 VDFPANLVGFVQIIRERHPLTPIVLGSSV 292 (385)
T ss_dssp TTHHHHHHHHHHHHHTTCSSSCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 35667889999999999999999887753
No 17
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=95.85 E-value=0.0022 Score=45.80 Aligned_cols=26 Identities=19% Similarity=0.304 Sum_probs=23.0
Q ss_pred CcceeecCCChhHHHHHHHHHHHHhC
Q 032036 105 AVRINWDGVHYTEAANKWVYDQIING 130 (148)
Q Consensus 105 ~~y~fwD~~HPT~~~h~~iA~~~~~~ 130 (148)
.++++.|++|||+++|++||+.+...
T Consensus 148 ~~~~~~Dg~Hpn~~G~~~~a~~i~~~ 173 (190)
T 1ivn_A 148 PQWMQDDGIHPNRDAQPFIADWMAKQ 173 (190)
T ss_dssp GGGBCTTSSSBCGGGHHHHHHHHHHH
T ss_pred chhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 35788999999999999999998864
No 18
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.84 E-value=0.0037 Score=45.68 Aligned_cols=24 Identities=25% Similarity=0.178 Sum_probs=21.0
Q ss_pred cceeecCCChhHHHHHHHHHHHHh
Q 032036 106 VRINWDGVHYTEAANKWVYDQIIN 129 (148)
Q Consensus 106 ~y~fwD~~HPT~~~h~~iA~~~~~ 129 (148)
..++.|++||+++||++||+.+..
T Consensus 180 ~~~~~DglHpn~~Gy~~~a~~i~~ 203 (209)
T 4hf7_A 180 PQYTKDGVHPTGEGYDIMEALIKQ 203 (209)
T ss_dssp GGGBSSSSSBCHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHH
Confidence 346789999999999999999874
No 19
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=95.80 E-value=0.047 Score=42.99 Aligned_cols=28 Identities=18% Similarity=0.249 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 032036 18 ARFFNSRLKAAVVQLRKDLPLAAMTYVD 45 (148)
Q Consensus 18 ~~~fN~~L~~~l~~l~~~~~~~~i~~~D 45 (148)
.+.|-..|.++|+++++++|+.+|+++-
T Consensus 233 ~~~~~~~l~~li~~ir~~~p~a~Iil~~ 260 (341)
T 2wao_A 233 KTKFVTAYKNLISEVRRNYPDAHIFCCV 260 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 3567788999999999999999998876
No 20
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=95.49 E-value=0.005 Score=44.47 Aligned_cols=22 Identities=32% Similarity=0.404 Sum_probs=20.2
Q ss_pred eeecCCChhHHHHHHHHHHHHh
Q 032036 108 INWDGVHYTEAANKWVYDQIIN 129 (148)
Q Consensus 108 ~fwD~~HPT~~~h~~iA~~~~~ 129 (148)
+++|++|||+++|++||+.+..
T Consensus 189 ~~~Dg~Hpn~~G~~~~a~~i~~ 210 (216)
T 2q0q_A 189 DGVDGIHFTEANNRDLGVALAE 210 (216)
T ss_dssp CSTTSSSCCHHHHHHHHHHHHH
T ss_pred CCCCccCcCHHHHHHHHHHHHH
Confidence 6789999999999999999874
No 21
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=95.42 E-value=0.048 Score=43.15 Aligned_cols=28 Identities=14% Similarity=0.180 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 032036 18 ARFFNSRLKAAVVQLRKDLPLAAMTYVD 45 (148)
Q Consensus 18 ~~~fN~~L~~~l~~l~~~~~~~~i~~~D 45 (148)
.+.|=..|.++|+.+++++|+.+|+++-
T Consensus 245 ~~~~~~~l~~li~~ir~~~p~~~I~l~~ 272 (347)
T 2waa_A 245 RATYINTYTRFVRTLLDNHPQATIVLTE 272 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 3577788999999999999999988875
No 22
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=94.76 E-value=0.056 Score=40.91 Aligned_cols=27 Identities=19% Similarity=0.372 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEec
Q 032036 20 FFNSRLKAAVVQLRKDLPLAAMTYVDI 46 (148)
Q Consensus 20 ~fN~~L~~~l~~l~~~~~~~~i~~~D~ 46 (148)
.|=..|..+++.++++.|+++|+++-.
T Consensus 142 ~~~~~l~~li~~lr~~~p~a~Iilitp 168 (274)
T 3bzw_A 142 TYRGRINIGITQLKKLFPDKQIVLLTP 168 (274)
T ss_dssp SHHHHHHHHHHHHHHHCTTSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 355678999999999999999988654
No 23
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=94.17 E-value=0.21 Score=39.75 Aligned_cols=28 Identities=14% Similarity=0.090 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 032036 18 ARFFNSRLKAAVVQLRKDLPLAAMTYVD 45 (148)
Q Consensus 18 ~~~fN~~L~~~l~~l~~~~~~~~i~~~D 45 (148)
.+.|-..|.++|+.+++++|+.+|++.-
T Consensus 266 ~~~~~~~l~~li~~ir~~~p~a~Iil~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSNNARAQFILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 5678889999999999999999988875
No 24
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=92.82 E-value=0.04 Score=40.94 Aligned_cols=22 Identities=18% Similarity=0.240 Sum_probs=19.7
Q ss_pred eecCCChhHHHHHHHHHHHHhC
Q 032036 109 NWDGVHYTEAANKWVYDQIING 130 (148)
Q Consensus 109 fwD~~HPT~~~h~~iA~~~~~~ 130 (148)
-.|++||++++|++||+.+.+.
T Consensus 190 ~~DgiHpn~~G~~~iA~~i~~~ 211 (233)
T 1k7c_A 190 PIDHTHTSPAGAEVVAEAFLKA 211 (233)
T ss_dssp SSSSSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHH
Confidence 3699999999999999998864
No 25
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=92.07 E-value=0.062 Score=43.20 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=20.8
Q ss_pred ceeecCCChhHHHHHHHHHHHHhC
Q 032036 107 RINWDGVHYTEAANKWVYDQIING 130 (148)
Q Consensus 107 y~fwD~~HPT~~~h~~iA~~~~~~ 130 (148)
|+-.|++||++++|++||+.+...
T Consensus 335 ~~~~DgvHpn~~G~~~~A~~i~~~ 358 (375)
T 2o14_A 335 YMDGDTLHPNRAGADALARLAVQE 358 (375)
T ss_dssp BCTTCSSSBBHHHHHHHHHHHHHH
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHH
Confidence 444699999999999999999864
No 26
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=87.85 E-value=0.13 Score=39.84 Aligned_cols=31 Identities=13% Similarity=-0.009 Sum_probs=24.9
Q ss_pred CCcceeecCCChhH-HHHHHHHHHHHhCCCCC
Q 032036 104 PAVRINWDGVHYTE-AANKWVYDQIINGSYSD 134 (148)
Q Consensus 104 p~~y~fwD~~HPT~-~~h~~iA~~~~~~~~~~ 134 (148)
|...+++|++||+. .|+-++|-.++...+..
T Consensus 195 p~~~l~~Dg~Hps~~~GsYLaA~v~y~~L~g~ 226 (271)
T 4i8i_A 195 IGDHMNRDGYHLDLTIGRYTAACTWFEALTHR 226 (271)
T ss_dssp TCSCCBSSSSSBCTTHHHHHHHHHHHHHHHCC
T ss_pred cCccccCCCCCCCCccCHHHHHHHHHHHHhCC
Confidence 44567799999999 99999999888754433
No 27
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=50.79 E-value=20 Score=23.40 Aligned_cols=35 Identities=9% Similarity=0.027 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcCCCC
Q 032036 23 SRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLGFEN 64 (148)
Q Consensus 23 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yGf~n 64 (148)
+.|...+++|.+++|+++|+-+|+-.. +++||...
T Consensus 39 ~~~~p~l~~la~~~~~v~f~kvd~d~~-------~~~~~v~~ 73 (118)
T 3evi_A 39 LLVNQHLSLLARKFPETKFVKAIVNSC-------IQHYHDNC 73 (118)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEGGGT-------STTCCGGG
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEhHHh-------HHHCCCCC
Confidence 456777888888899999999998763 57787654
No 28
>3bma_A D-alanyl-lipoteichoic acid synthetase; structural genomics, D-alanyl-lipoteichoic acid biosynthesis structure initiative, PSI-2; 2.24A {Streptococcus pneumoniae}
Probab=40.24 E-value=10 Score=30.98 Aligned_cols=24 Identities=8% Similarity=-0.212 Sum_probs=20.5
Q ss_pred CcceeecCCChhHHHHHHHHHHHH
Q 032036 105 AVRINWDGVHYTEAANKWVYDQII 128 (148)
Q Consensus 105 ~~y~fwD~~HPT~~~h~~iA~~~~ 128 (148)
+.|+.+|.+||+..||-.|-+.|.
T Consensus 342 epYfm~DtiHlGw~GWv~~Dk~I~ 365 (407)
T 3bma_A 342 EPFFMKDTIHLGWLGWLAFDKAVD 365 (407)
T ss_dssp STTCBSSSSCBCTTHHHHHHHHHH
T ss_pred CCceeeecccCchhHHHHHHHHHH
Confidence 569999999999999988877654
No 29
>2apj_A Putative esterase; AT4G34215, CAR esterase family 6, structural genomics, protein structure initiative, CESG; HET: SEB; 1.60A {Arabidopsis thaliana} SCOP: c.23.10.7
Probab=38.58 E-value=15 Score=27.79 Aligned_cols=30 Identities=27% Similarity=0.422 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHhC--CCcEEEEEecc
Q 032036 18 ARFFNSRLKAAVVQLRKDL--PLAAMTYVDIF 47 (148)
Q Consensus 18 ~~~fN~~L~~~l~~l~~~~--~~~~i~~~D~~ 47 (148)
...|-.+|..++++|++.+ |++-|+++-+-
T Consensus 170 ~~~Y~~~l~~lI~~wR~~~~~~~lPf~~vql~ 201 (260)
T 2apj_A 170 AESYGNNMDRLIKNLRHDLNLPSLPIIQVAIA 201 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEEec
Confidence 5789999999999999986 46778887764
No 30
>1zmb_A Acetylxylan esterase related enzyme; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.61A {Clostridium acetobutylicum} SCOP: c.23.10.7
Probab=34.48 E-value=19 Score=27.68 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHhC--CCcEEEEEeccHH
Q 032036 18 ARFFNSRLKAAVVQLRKDL--PLAAMTYVDIFSV 49 (148)
Q Consensus 18 ~~~fN~~L~~~l~~l~~~~--~~~~i~~~D~~~~ 49 (148)
...|-.+|..++++|++.+ |++.|+++-+-..
T Consensus 128 ~~~Y~~~l~~lI~~wR~~~~~~~lPf~~vql~~~ 161 (290)
T 1zmb_A 128 YKVYYKKLLLIIEALRKELNVPDIPIIIGGLGDF 161 (290)
T ss_dssp STTHHHHHHHHHHHHHHHTTCSSSCEEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc
Confidence 3568899999999999988 7888988876543
No 31
>3iz5_R 60S ribosomal protein L18 (L18E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_R
Probab=31.70 E-value=32 Score=25.01 Aligned_cols=29 Identities=17% Similarity=0.335 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCchhhhhccc
Q 032036 118 AANKWVYDQIINGSYSDPPIPMEMACRVM 146 (148)
Q Consensus 118 ~~h~~iA~~~~~~~~~~~p~~~~~~~~~~ 146 (148)
..|+.|++.++.-...++|+|+..|.+.+
T Consensus 43 pf~r~V~KRLf~sr~~r~pVnLsrL~r~~ 71 (188)
T 3iz5_R 43 KFNAVILKRLFMSKTNRPPLSMRRLSNFM 71 (188)
T ss_dssp HHHHHHHHHHHSCTTTCCEEEHHHHHTTS
T ss_pred hHHHHHHHHHcCCccccCcccHHHHHHHh
Confidence 57999999999877788999999998654
No 32
>3izc_R 60S ribosomal protein RPL18 (L18E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_R 3o58_R 3o5h_R 3u5e_Q 3u5i_Q 4b6a_Q
Probab=28.39 E-value=30 Score=25.14 Aligned_cols=29 Identities=21% Similarity=0.385 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCchhhhhccc
Q 032036 118 AANKWVYDQIINGSYSDPPIPMEMACRVM 146 (148)
Q Consensus 118 ~~h~~iA~~~~~~~~~~~p~~~~~~~~~~ 146 (148)
..|+.|++.++.-...+||+|++.|.+.+
T Consensus 43 pf~r~V~KRLf~sr~~r~~VnLsrI~r~~ 71 (186)
T 3izc_R 43 PFNKVVLKALFLSKINRPPVSVSRIARAL 71 (186)
T ss_dssp HHHHHHHHHHHSCTTTCCEEEHHHHHHHT
T ss_pred hHHHHHHHHHhCCCcccCcccHHHHHHHh
Confidence 57999999999877788999999997644
No 33
>4a17_N RPL18, 60S ribosomal protein L5; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_N 4a1c_N 4a1e_N
Probab=28.24 E-value=25 Score=25.45 Aligned_cols=29 Identities=7% Similarity=0.213 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCchhhhhccc
Q 032036 118 AANKWVYDQIINGSYSDPPIPMEMACRVM 146 (148)
Q Consensus 118 ~~h~~iA~~~~~~~~~~~p~~~~~~~~~~ 146 (148)
..|+.|++.++.-...++|+|++.|.+.+
T Consensus 44 pf~r~V~KRLf~sr~nr~pVnLsrI~r~~ 72 (181)
T 4a17_N 44 KFNQNILKRLSSSRLNKFPLSLSRIVKNL 72 (181)
T ss_dssp HHHHHHHHHHSCCGGGSCCEEHHHHHHSC
T ss_pred hHHHHHHHHHcCCccccCcccHHHHHHHh
Confidence 57899999998876788999999997654
No 34
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=27.99 E-value=67 Score=26.43 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=31.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhCCCc-EEEEEec
Q 032036 11 ATPFNDVARFFNSRLKAAVVQLRKDLPLA-AMTYVDI 46 (148)
Q Consensus 11 ~~~~n~~~~~fN~~L~~~l~~l~~~~~~~-~i~~~D~ 46 (148)
++++..++=+||..=...++.+++.+|++ ++.+||+
T Consensus 124 ie~l~~LAPLHNP~nl~gI~a~~~~~P~~pqVAvFDT 160 (438)
T 4h0p_A 124 MDKLSEFAPLHNHRAVLAVKSCIDALPHHTSLLLFDT 160 (438)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred HHHhccCCCcCCHHHHHHHHHHHHHCCCCCeEEEecC
Confidence 45677889999999899999999999997 7999997
No 35
>4g3o_A E3 ubiquitin-protein ligase AMFR; all-helical structure, BAG6; 1.60A {Homo sapiens}
Probab=27.80 E-value=65 Score=18.84 Aligned_cols=21 Identities=24% Similarity=0.483 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCc
Q 032036 19 RFFNSRLKAAVVQLRKDLPLA 39 (148)
Q Consensus 19 ~~fN~~L~~~l~~l~~~~~~~ 39 (148)
-.+|.+|..++++++.-+|.+
T Consensus 11 ~~~~sql~~Mve~V~~mFPqv 31 (58)
T 4g3o_A 11 LYFQGQLNAMAHQIQEMFPQV 31 (58)
T ss_dssp HHHHHHHHHHHHHHHHHCTTS
T ss_pred HhhhHHHHHHHHHHHHHcCCC
Confidence 468999999999999999975
No 36
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A*
Probab=25.13 E-value=1.1e+02 Score=24.63 Aligned_cols=39 Identities=15% Similarity=0.238 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 23 SRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 23 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
...++...++.++||++.+-..=+-++...++.+|++|.
T Consensus 212 glf~~~~~eva~eypdV~~~~~~VD~~am~lv~~P~~FD 250 (375)
T 3vmk_A 212 VLWREVVEEVAKDYPDVELEHIYIDNATMQLLRRPNEFD 250 (375)
T ss_dssp HHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred hHHHHHHHHHHHHCCCceEeeeeHHHHHHHHHhCcccCc
Confidence 344566777778999998777777788889999999984
No 37
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana}
Probab=25.12 E-value=1.1e+02 Score=24.89 Aligned_cols=39 Identities=13% Similarity=0.207 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 23 SRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 23 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
...++...++.++||++.+-..=+-.+...++.+|+.|.
T Consensus 240 glf~~~~~eva~eYPdV~~~~~~VD~~amqLV~~P~~FD 278 (405)
T 3r8w_A 240 ILWRKRVTALASEYPDVELSHMYVDNAAMQLVRDPKQFD 278 (405)
T ss_dssp HHHHHHHHHHGGGSTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred cHHHHHHHHHHhHCCCCeEEeeeHHHHHHHHHhChhhCc
Confidence 455667778888999998877777788899999999984
No 38
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=24.84 E-value=1e+02 Score=24.28 Aligned_cols=38 Identities=13% Similarity=0.180 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
..++...++.++||++.+-..=+-.+...++.+|..|.
T Consensus 189 lf~~~~~eva~eyp~i~~~~~~vD~~~mqlv~~P~~FD 226 (337)
T 1w0d_A 189 LWLRTVDEVGECYPDVEVAYQHVDAATIHMITDPGRFD 226 (337)
T ss_dssp HHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred HHHHHHHHHHHHCCceEEEEEEHHHHHHHHhhCccccc
Confidence 34556666777899998877777888899999999884
No 39
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=24.42 E-value=1.1e+02 Score=24.25 Aligned_cols=38 Identities=13% Similarity=0.077 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
..++...++.++||++.+-..=+-.+...++.+|..|.
T Consensus 199 lf~~~~~eva~eypdI~~~~~~vD~~~m~lv~~P~~FD 236 (354)
T 3blx_B 199 LFVNVAKELSKEYPDLTLETELIDNSVLKVVTNPSAYT 236 (354)
T ss_dssp HHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGGT
T ss_pred HHHHHHHHHHHHCCCceEEEEEHHHHHHHHhhChhhCC
Confidence 34556677778899998887778888899999999986
No 40
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A
Probab=24.17 E-value=1.2e+02 Score=24.18 Aligned_cols=39 Identities=10% Similarity=0.178 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 23 SRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 23 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
...++...++.++||++.+-..=+-.+...++.+|++|.
T Consensus 200 glf~~~~~eva~eypdV~~~~~~VD~~am~lv~~P~~FD 238 (361)
T 3udu_A 200 ILWREVVANVAKDYQDINLEYMYVDNAAMQIVKNPSIFD 238 (361)
T ss_dssp HHHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred hHHHHHHHHHHHHCCCCeEEeeeHHHHHHHHHhCcccCc
Confidence 344566777888999998877777788889999999984
No 41
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=24.07 E-value=1.1e+02 Score=24.42 Aligned_cols=38 Identities=11% Similarity=0.171 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
..++...++.++||++.+-..=+-++...++.+|+.|.
T Consensus 197 lf~~~~~eva~eypdI~~~~~~VD~~~mqlv~~P~~FD 234 (359)
T 2y3z_A 197 FWRKTVEEVGRGYPDVALEHQYVDAMAMHLVRSPARFD 234 (359)
T ss_dssp HHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred HHHHHHHHHHHHCCcEEEEeeEHHHHHHHHhhCccccc
Confidence 44566777778999998887777888899999999884
No 42
>3jyw_O 60S ribosomal protein L18(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_O
Probab=23.51 E-value=38 Score=22.80 Aligned_cols=29 Identities=21% Similarity=0.385 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCchhhhhccc
Q 032036 118 AANKWVYDQIINGSYSDPPIPMEMACRVM 146 (148)
Q Consensus 118 ~~h~~iA~~~~~~~~~~~p~~~~~~~~~~ 146 (148)
..|+.+++..+.-...++|+|+++|.+.+
T Consensus 23 pl~rrvpKRgF~sr~~~~~VnLs~L~~~~ 51 (121)
T 3jyw_O 23 PFNKVVLKALFLSKINRPPVSVSRIARAL 51 (121)
T ss_dssp HHHHHHHHTTTSCSTTSCCBCHHHHHHHT
T ss_pred hHHHHHHHHHCCCCCccceEEHHHHHHHh
Confidence 47889999888777788999999997644
No 43
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A
Probab=23.07 E-value=1.2e+02 Score=23.92 Aligned_cols=38 Identities=16% Similarity=0.302 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
..++...++.++||++.+-..=+-.+...++.+|+.|.
T Consensus 180 lf~~~~~eva~eyp~I~~~~~~vD~~~m~lv~~P~~FD 217 (333)
T 1x0l_A 180 LFLDTVKEVAKDFPLVNVQDIIVDNCAMQLVMRPERFD 217 (333)
T ss_dssp HHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred HHHHHHHHHHHHCCCceEEEEEHHHHHHHHhhCcccce
Confidence 33556666777899998777777788899999999984
No 44
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Probab=22.92 E-value=1.2e+02 Score=24.30 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
..++...++.++||++.+-..=+-++...++.+|++|.
T Consensus 208 lf~~~~~eva~eypdV~~~~~~VD~~~mqlv~~P~~FD 245 (366)
T 1vlc_A 208 LWRKVVNEVAREYPDVELTHIYVDNAAMQLILKPSQFD 245 (366)
T ss_dssp HHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred HHHHHHHHHHHHCCCceEEeeeHHHHHHHHhhCcccce
Confidence 44566677777999998877777788899999999884
No 45
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=22.59 E-value=1.2e+02 Score=24.17 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
..++...++.++||++.+-..=+-++...++.+|+.|.
T Consensus 204 lf~~~~~eva~eypdI~~~~~~vD~~~m~lv~~P~~FD 241 (363)
T 1cnz_A 204 LWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQFD 241 (363)
T ss_dssp HHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred hHHHHHHHHHHHCCCceEeeeeHHHHHHHHhhCcccce
Confidence 44566777778999998877777788899999999884
No 46
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1
Probab=22.53 E-value=1.3e+02 Score=23.97 Aligned_cols=38 Identities=13% Similarity=0.237 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
..++...++.++||++.+-..=+-++...++.+|+.|.
T Consensus 199 lf~~~~~eva~eypdI~~~~~~vD~~~mqlv~~P~~FD 236 (358)
T 1a05_A 199 LWREVVTEVARDYPDVRLSHMYVDNAAMQLIRAPAQFD 236 (358)
T ss_dssp HHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred hHHHHHHHHHHHCCCceEEeeeHHHHHHHHHhCCCccc
Confidence 44566777778999998777777788899999999883
No 47
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=22.40 E-value=1.3e+02 Score=24.31 Aligned_cols=39 Identities=10% Similarity=0.187 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 23 SRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 23 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
...++...++.++||++.+-..=+-++...++.+|++|.
T Consensus 219 glfr~~~~eva~eYPdV~~~~~~VD~~amqLV~~P~~FD 257 (390)
T 3u1h_A 219 RLWREVAEEVAKEYPDVELEHMLVDNAAMQLIRNPRQFD 257 (390)
T ss_dssp HHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred hHHHHHHHHHHhHCCCCeEEeeeHHHHHHHHHhCcccCc
Confidence 344566677778899998877777788889999999984
No 48
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=22.24 E-value=70 Score=18.39 Aligned_cols=25 Identities=28% Similarity=0.274 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccH
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFS 48 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~ 48 (148)
++...++++.++++++.+..+|+..
T Consensus 16 ~~~~~l~~l~~~~~~i~~~~vdi~~ 40 (85)
T 1ego_A 16 RAKDLAEKLSNERDDFQYQYVDIRA 40 (85)
T ss_dssp HHHHHHHHHHHHHSSCEEEEECHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeccc
Confidence 4555666776666789999999854
No 49
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X*
Probab=21.97 E-value=1.3e+02 Score=23.91 Aligned_cols=37 Identities=8% Similarity=0.093 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 25 LKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 25 L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
.++...++.++||++.+-..=+-++...++.+|+.|.
T Consensus 203 f~~~~~eva~eypdv~~~~~~vD~~am~lv~~P~~FD 239 (364)
T 3flk_A 203 WDKRTEAMAAHYPHVSWDKQHIDILCARFVLQPERFD 239 (364)
T ss_dssp HHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHCGGGCS
T ss_pred HHHHHHHHHHHCCCceEEeeEHHHHHHHHHhCcccCc
Confidence 3455666677899998777777788889999999984
No 50
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=21.86 E-value=1.2e+02 Score=18.37 Aligned_cols=25 Identities=12% Similarity=0.240 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccH
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFS 48 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~ 48 (148)
++...+.++.++++++.++.+|+..
T Consensus 41 ~~~p~l~~l~~~~~~~~~~~vd~~~ 65 (109)
T 3f3q_A 41 MIAPMIEKFSEQYPQADFYKLDVDE 65 (109)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEETTT
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4455667777788899999999853
No 51
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=21.66 E-value=1.3e+02 Score=17.73 Aligned_cols=25 Identities=16% Similarity=0.103 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeccH
Q 032036 24 RLKAAVVQLRKDLPLAAMTYVDIFS 48 (148)
Q Consensus 24 ~L~~~l~~l~~~~~~~~i~~~D~~~ 48 (148)
++...+.++.++++++.++.+|...
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~vd~~~ 61 (105)
T 3m9j_A 37 MIKPFFHSLSEKYSNVIFLEVDVDD 61 (105)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEETTT
T ss_pred HHHHHHHHHHHHccCeEEEEEEhhh
Confidence 4455667777788899999999753
No 52
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A*
Probab=21.61 E-value=1.4e+02 Score=23.56 Aligned_cols=37 Identities=5% Similarity=0.238 Sum_probs=29.4
Q ss_pred HHHHHHHHH-HhCCCcEEEEEeccHHHHHHHHhhhhcC
Q 032036 25 LKAAVVQLR-KDLPLAAMTYVDIFSVKHSLITQAKKLG 61 (148)
Q Consensus 25 L~~~l~~l~-~~~~~~~i~~~D~~~~~~~vi~~P~~yG 61 (148)
.++...++. ++||++.+-..=+-.+...++.+|..|.
T Consensus 194 f~~~~~eva~~eyp~i~~~~~~vD~~~~qlv~~P~~FD 231 (349)
T 3blx_A 194 FRNIITEIGQKEYPDIDVSSIIVDNASMQAVAKPHQFD 231 (349)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred HHHHHHHHHHhhCCCeeEEEeeHHHHHHHHhhCccccc
Confidence 345566666 7899998877777888899999999884
No 53
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=20.07 E-value=1.2e+02 Score=19.97 Aligned_cols=45 Identities=31% Similarity=0.375 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEEEeccHHHHHHHHhhhhcCCCC
Q 032036 18 ARFFNSRLKAAVVQLRKDLPLAAMTYVDIFSVKHSLITQAKKLGFEN 64 (148)
Q Consensus 18 ~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~vi~~P~~yGf~n 64 (148)
...|-..|++.|+.++++ +-+-+-+-+..-..+.+.--.+.||..
T Consensus 50 ~~~F~~~L~~SL~~Wr~~--gk~~IWlklpi~~s~lIp~a~~~GF~f 94 (113)
T 3fxt_A 50 AAAFQKGLQAAVQQWRSE--GRTAVWLHIPILQSRFIAPAASLGFCF 94 (113)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGGGHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHc--CCeeEEEEcCHHHhhhHHHHHHcCcee
Confidence 789999999999999985 445556666666666666666788853
Done!