Query 032037
Match_columns 148
No_of_seqs 314 out of 1269
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 14:00:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032037.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032037hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kci_A Putative acyl carrier p 99.8 2.2E-20 7.5E-25 129.3 6.9 77 70-146 2-78 (87)
2 2l9f_A CALE8, meacp; transfera 99.8 2.2E-19 7.5E-24 127.7 8.6 78 69-147 13-92 (102)
3 2dnw_A Acyl carrier protein; A 99.8 4.1E-19 1.4E-23 124.0 9.6 89 59-147 4-92 (99)
4 3gzm_A Acyl carrier protein; h 99.8 4.3E-19 1.5E-23 119.1 7.9 79 67-145 2-80 (81)
5 2l4b_A Acyl carrier protein; i 99.8 3.3E-19 1.1E-23 121.5 7.1 83 65-147 3-88 (88)
6 2kjs_A Putative acyl carrier p 99.8 6.4E-19 2.2E-23 121.6 8.1 76 72-147 4-79 (87)
7 3ejb_A Acyl carrier protein; p 99.8 5E-19 1.7E-23 123.8 7.5 81 64-144 16-96 (97)
8 2kwl_A ACP, acyl carrier prote 99.8 1.7E-18 5.8E-23 116.6 8.8 81 64-144 3-83 (84)
9 4dxe_H ACP, acyl carrier prote 99.8 1E-18 3.4E-23 123.6 7.1 78 67-144 23-100 (101)
10 2lol_A ACP, acyl carrier prote 99.8 4.8E-18 1.6E-22 113.3 9.3 79 66-144 2-80 (81)
11 2qnw_A Acyl carrier protein; m 99.7 3.4E-18 1.2E-22 114.8 8.1 79 66-144 3-81 (82)
12 2ava_A ACP I, acyl carrier pro 99.7 4.7E-18 1.6E-22 113.8 8.5 80 67-147 1-81 (82)
13 2cnr_A FAS, ACP, acyl carrier 99.7 1E-17 3.4E-22 111.7 10.1 80 65-144 2-81 (82)
14 1f80_D Acyl carrier protein; t 99.7 1.2E-18 4.1E-23 116.3 5.2 79 65-143 2-80 (81)
15 3ce7_A Specific mitochodrial a 99.7 6.9E-18 2.3E-22 120.3 9.4 80 66-146 15-99 (107)
16 1vku_A Acyl carrier protein; T 99.7 5.4E-18 1.9E-22 119.6 8.6 82 65-147 12-93 (100)
17 1x3o_A Acyl carrier protein; s 99.7 1.4E-17 4.8E-22 110.3 9.1 79 66-144 1-79 (80)
18 2cgq_A Acyl carrier protein AC 99.7 6E-18 2.1E-22 122.2 7.0 85 56-147 18-102 (113)
19 1klp_A ACP, ACPM, meromycolate 99.7 2.6E-17 9E-22 117.8 10.2 82 65-146 2-83 (115)
20 1dv5_A APO-DCP, APO-D-alanyl c 99.7 1.1E-17 3.9E-22 112.5 7.7 75 68-143 2-79 (80)
21 1l0i_A Acyl carrier protein; a 99.7 2.5E-17 8.4E-22 109.1 7.9 75 70-144 3-77 (78)
22 1af8_A Actinorhodin polyketide 99.7 7.8E-18 2.7E-22 113.8 5.5 78 68-146 3-84 (86)
23 2kw2_A Specialized acyl carrie 99.7 2.2E-17 7.4E-22 116.0 6.9 77 70-146 3-90 (101)
24 2lki_A Putative uncharacterize 99.7 7.9E-17 2.7E-21 114.6 8.3 76 70-145 24-104 (105)
25 2amw_A Hypothetical protein NE 99.7 8.8E-17 3E-21 108.3 8.1 76 70-145 2-82 (83)
26 2lte_A Specialized acyl carrie 99.5 2.5E-18 8.4E-23 121.9 0.0 80 65-146 22-101 (103)
27 2jq4_A AGR_C_4658P, hypothetic 99.7 1.4E-16 4.8E-21 113.0 6.5 82 64-146 16-101 (105)
28 2ehs_A ACP, acyl carrier prote 99.6 5.3E-16 1.8E-20 101.8 8.2 76 70-145 1-76 (77)
29 1or5_A Acyl carrier protein; A 99.6 9.8E-17 3.3E-21 107.7 3.2 76 70-146 4-82 (83)
30 1nq4_A Oxytetracycline polyket 99.6 1.1E-15 3.9E-20 106.1 7.1 73 72-145 6-82 (95)
31 2l3v_A ACP, acyl carrier prote 99.6 8.3E-17 2.8E-21 106.6 0.9 75 70-144 4-78 (79)
32 1fh1_A NODF, nodulation protei 99.6 5.4E-17 1.8E-21 111.9 -0.9 78 69-147 3-91 (92)
33 2afd_A Protein ASL1650; twiste 99.5 4.4E-14 1.5E-18 94.5 9.9 80 64-144 8-87 (88)
34 2kr5_A PKS, aflatoxin biosynth 99.5 3.6E-14 1.2E-18 95.7 7.4 79 65-144 6-86 (89)
35 2liu_A CURA; holo state, trans 99.5 4.9E-14 1.7E-18 96.4 6.6 81 65-146 16-96 (99)
36 2cg5_B Fatty acid synthase; tr 99.4 4.5E-13 1.5E-17 93.3 7.5 70 73-144 9-79 (91)
37 2ju1_A Erythronolide synthase; 99.4 3.3E-13 1.1E-17 92.0 6.5 76 68-144 18-94 (95)
38 2l22_A Mupirocin didomain acyl 99.4 3.6E-13 1.2E-17 104.6 7.1 85 60-145 16-100 (212)
39 2l22_A Mupirocin didomain acyl 99.3 6E-12 2.1E-16 97.6 9.2 79 67-146 127-205 (212)
40 4i4d_A Peptide synthetase NRPS 99.3 7.9E-12 2.7E-16 85.7 8.6 76 68-146 14-89 (93)
41 1dny_A Non-ribosomal peptide s 99.3 1.1E-11 3.8E-16 85.0 8.2 74 67-143 11-84 (91)
42 3tej_A Enterobactin synthase c 98.8 8.4E-09 2.9E-13 83.6 8.3 76 66-144 7-82 (329)
43 2cq8_A 10-formyltetrahydrofola 98.8 1.2E-08 4.2E-13 73.1 6.4 74 68-144 23-98 (110)
44 2jgp_A Tyrocidine synthetase 3 98.4 5.5E-07 1.9E-11 76.5 8.5 74 67-143 7-80 (520)
45 2fq1_A Isochorismatase; ENTB, 98.4 6.3E-07 2.2E-11 72.5 6.6 66 73-141 218-283 (287)
46 2vsq_A Surfactin synthetase su 98.1 6E-06 2E-10 78.3 7.1 76 66-144 968-1043(1304)
47 4f6l_B AUSA reductase domain p 98.0 1.1E-06 3.8E-11 75.2 0.0 74 67-144 42-115 (508)
48 3rg2_A Enterobactin synthase c 97.8 2.2E-05 7.5E-10 68.6 6.0 72 70-144 545-616 (617)
49 4dg8_A PA1221; ANL superfamily 97.8 3.5E-06 1.2E-10 74.2 0.0 75 67-144 521-596 (620)
50 2vz8_A Fatty acid synthase; tr 97.2 6.2E-05 2.1E-09 76.1 0.0 70 72-143 2125-2195(2512)
51 3zen_D Fatty acid synthase; tr 83.5 0.22 7.6E-06 51.8 0.0 54 71-125 1795-1849(3089)
52 1dd4_C 50S ribosomal protein L 79.6 1.8 6.1E-05 25.1 3.0 21 101-121 12-32 (40)
53 1zav_U 50S ribosomal protein L 73.5 2.5 8.6E-05 23.0 2.3 17 103-119 14-30 (30)
54 1v32_A AT5G08430, hypothetical 66.0 5.3 0.00018 27.5 3.3 70 51-120 15-92 (101)
55 3ufe_A Transcriptional antiter 47.7 12 0.00043 24.5 2.6 21 107-127 79-99 (111)
56 1q1v_A DEK protein; winged-hel 46.0 38 0.0013 21.5 4.6 44 65-126 11-55 (70)
57 1uhr_A SWI/SNF related, matrix 45.6 8.5 0.00029 25.8 1.5 58 62-119 23-83 (93)
58 2pls_A CBS domain protein; APC 44.6 28 0.00095 22.3 3.9 33 111-143 19-52 (86)
59 2oai_A Hemolysin; PFAM03471, x 43.1 23 0.00078 23.3 3.3 33 111-143 28-60 (94)
60 2bnk_A Early protein GP16.7; D 43.0 30 0.001 21.7 3.6 32 113-144 14-50 (67)
61 1v31_A Hypothetical protein RA 40.0 8 0.00027 25.9 0.6 66 53-119 15-83 (93)
62 3llb_A Uncharacterized protein 38.6 36 0.0012 21.7 3.7 30 111-143 19-48 (83)
63 3ded_A Probable hemolysin; str 37.0 42 0.0015 22.9 4.1 33 111-143 45-79 (113)
64 2rk5_A Putative hemolysin; str 36.4 37 0.0013 21.8 3.5 29 111-142 18-46 (87)
65 2p3h_A Uncharacterized CBS dom 36.0 37 0.0013 22.9 3.5 30 111-143 22-51 (101)
66 3lae_A UPF0053 protein HI0107; 32.9 33 0.0011 21.7 2.8 27 111-140 19-45 (81)
67 2pli_A Uncharacterized protein 31.8 49 0.0017 21.4 3.5 30 111-143 28-57 (91)
68 2p13_A CBS domain; alpha-beta 31.8 52 0.0018 21.2 3.6 31 111-142 25-55 (90)
69 3rio_A PTSGHI operon antitermi 31.7 28 0.00097 25.5 2.6 21 107-127 147-167 (180)
70 2r2z_A Hemolysin; APC85144, en 30.9 51 0.0017 21.3 3.5 30 111-143 26-55 (93)
71 2uv8_A Fatty acid synthase sub 28.2 1.2E+02 0.0043 30.6 7.0 66 72-141 148-214 (1887)
72 2p4p_A Hypothetical protein HD 26.9 65 0.0022 20.5 3.4 31 111-143 19-50 (86)
73 3m20_A 4-oxalocrotonate tautom 25.1 74 0.0025 18.7 3.3 23 68-90 15-37 (62)
74 2pag_A Hypothetical protein; n 25.0 39 0.0013 23.8 2.2 18 108-125 24-41 (135)
75 2kxo_A Cell division topologic 25.0 57 0.002 21.9 2.9 27 65-91 37-63 (95)
76 3id6_A NOP5, PRE mRNA splicing 24.6 1E+02 0.0035 24.5 4.8 39 94-133 198-236 (268)
77 2opa_A Probable tautomerase YW 23.2 65 0.0022 18.4 2.7 23 68-90 16-38 (61)
78 2zjq_5 50S ribosomal protein L 23.2 56 0.0019 23.2 2.7 22 101-122 14-35 (122)
79 1otf_A 4-oxalocrotonate tautom 22.9 66 0.0023 18.4 2.7 23 68-90 16-38 (62)
80 2j01_L 50S ribosomal protein L 22.8 58 0.002 23.2 2.7 22 101-122 14-35 (125)
81 1d0q_A DNA primase; zinc-bindi 21.9 47 0.0016 22.1 2.0 21 107-127 82-102 (103)
No 1
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=99.81 E-value=2.2e-20 Score=129.25 Aligned_cols=77 Identities=14% Similarity=0.262 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhCC
Q 032037 70 EIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAGE 146 (148)
Q Consensus 70 eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~~a 146 (148)
++.+++++++++.+++++++++++++|.+++|||||+.++++++||++|||+||++++.++.|++++++||.++...
T Consensus 2 ~i~ekv~~il~e~l~~d~~~i~~d~~l~~dlg~DSL~~veli~~lE~eF~I~i~~ed~~~~~Tv~dlv~~I~~~~~~ 78 (87)
T 2kci_A 2 PTLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLAR 78 (87)
T ss_dssp CSHHHHHHHHHHHTTCSCCCCCTTCCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCHHHCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999988899999999999999999999999999999999999999999987654
No 2
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=99.79 E-value=2.2e-19 Score=127.74 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccC--CCHHHHHHHHHHhhCC
Q 032037 69 DEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKL--TCCADVARYIASEAGE 146 (148)
Q Consensus 69 ~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~--~TV~dlv~~I~~~~~a 146 (148)
.+|.++|++++++.+++++++|+|+++|.+|||+|||+.|||++.+|++||++||++ ..++ .||+++++||.++.+.
T Consensus 13 ~~I~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~-~e~~~~~TV~d~vdyI~~~~~~ 91 (102)
T 2l9f_A 13 TGALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAM-PTNFATATVREMAEALEARERE 91 (102)
T ss_dssp CCHHHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSS-CSCCTTCBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCcc-HHHHHHccHHHHHHHHHHhhcc
Confidence 489999999999999999999999999999999999999999999999999999988 7777 9999999999998755
Q ss_pred C
Q 032037 147 K 147 (148)
Q Consensus 147 k 147 (148)
+
T Consensus 92 ~ 92 (102)
T 2l9f_A 92 A 92 (102)
T ss_dssp C
T ss_pred c
Confidence 3
No 3
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=4.1e-19 Score=123.97 Aligned_cols=89 Identities=38% Similarity=0.630 Sum_probs=82.3
Q ss_pred HHhcCCCCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHH
Q 032037 59 QMCASTSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVAR 138 (148)
Q Consensus 59 ~~~~~~~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~ 138 (148)
.|++-.+++++++.++|.+++++.+++++++|+++++|..+||+|||+.++|+..||++||++||++++.++.||+++++
T Consensus 4 ~~~~m~~m~~~~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~ 83 (99)
T 2dnw_A 4 GSSGMPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVD 83 (99)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHH
Confidence 45555678999999999999999999999999999999779999999999999999999999999999999999999999
Q ss_pred HHHHhhCCC
Q 032037 139 YIASEAGEK 147 (148)
Q Consensus 139 ~I~~~~~ak 147 (148)
||.++..++
T Consensus 84 ~i~~~~~~~ 92 (99)
T 2dnw_A 84 YIADKKDVY 92 (99)
T ss_dssp HHHHHCCSC
T ss_pred HHHHHhccc
Confidence 999987654
No 4
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=99.78 E-value=4.3e-19 Score=119.11 Aligned_cols=79 Identities=32% Similarity=0.496 Sum_probs=74.9
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 032037 67 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 145 (148)
Q Consensus 67 t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~~ 145 (148)
+++++.++|++++++.+++++++++++++|..+||+|||++++++++||++||++||++++.++.|++++++||.++.+
T Consensus 2 ~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 80 (81)
T 3gzm_A 2 SLKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNK 80 (81)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHhc
Confidence 5689999999999999999999999999997799999999999999999999999999999999999999999998764
No 5
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=99.78 E-value=3.3e-19 Score=121.45 Aligned_cols=83 Identities=39% Similarity=0.576 Sum_probs=78.1
Q ss_pred CCChHHHHHHHHHHHHhhh---CCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHH
Q 032037 65 SANPDEIMHRVIALVKKFD---KTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIA 141 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l---~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~ 141 (148)
.++++++.++|++++++.+ ++++++++++++|..++|||||+.++|++.||++||++||++++.++.|++++++||.
T Consensus 3 ~m~~~~i~~~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~ 82 (88)
T 2l4b_A 3 SMVSEEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYIA 82 (88)
T ss_dssp SSSCHHHHHHHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHH
Confidence 4788999999999999999 8888899999999889999999999999999999999999999999999999999999
Q ss_pred HhhCCC
Q 032037 142 SEAGEK 147 (148)
Q Consensus 142 ~~~~ak 147 (148)
++..++
T Consensus 83 ~~~~~~ 88 (88)
T 2l4b_A 83 SKSSDA 88 (88)
T ss_dssp HHSSCC
T ss_pred HhhccC
Confidence 987653
No 6
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=99.77 E-value=6.4e-19 Score=121.60 Aligned_cols=76 Identities=16% Similarity=0.285 Sum_probs=72.2
Q ss_pred HHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhCCC
Q 032037 72 MHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAGEK 147 (148)
Q Consensus 72 ~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~~ak 147 (148)
.+++.+|+++.+++++..|+++++|.+++|||||+.++++++||++||++||++++.++.||+++++||.+++++|
T Consensus 4 le~l~~I~~e~l~~d~~~i~~~~~~~d~lg~DSL~~veli~~ie~~fgi~i~~~~l~~~~TV~dl~~~I~~kl~~k 79 (87)
T 2kjs_A 4 LDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARK 79 (87)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTCCSTTCSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccCCCCCcccCCCCChHHHHHHHHHHHHHhCceecHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999777999999999999999999999999999999999999999999988664
No 7
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=99.77 E-value=5e-19 Score=123.84 Aligned_cols=81 Identities=40% Similarity=0.563 Sum_probs=75.3
Q ss_pred CCCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 64 TSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 64 ~~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
.+.+.+++.++|++++++.+++++++|+++++|..+||+|||+.+||+.+||++||++||++++.++.||+++++||.++
T Consensus 16 ~~~t~~~i~~~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 95 (97)
T 3ejb_A 16 RGSHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 95 (97)
T ss_dssp --CCCCCHHHHHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHh
Confidence 44778899999999999999999999999999978999999999999999999999999999999999999999999876
Q ss_pred h
Q 032037 144 A 144 (148)
Q Consensus 144 ~ 144 (148)
.
T Consensus 96 ~ 96 (97)
T 3ejb_A 96 Q 96 (97)
T ss_dssp -
T ss_pred c
Confidence 4
No 8
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=99.77 E-value=1.7e-18 Score=116.64 Aligned_cols=81 Identities=31% Similarity=0.504 Sum_probs=77.3
Q ss_pred CCCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 64 TSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 64 ~~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
..++++++.++|++++++.+++++++++++++|..++|+|||+.+++++.||++||++||++++.++.|++++++||.++
T Consensus 3 ~~m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 82 (84)
T 2kwl_A 3 GSMDNDEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKR 82 (84)
T ss_dssp CCSTHHHHHHHHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence 35889999999999999999999999999999988999999999999999999999999999999999999999999987
Q ss_pred h
Q 032037 144 A 144 (148)
Q Consensus 144 ~ 144 (148)
.
T Consensus 83 ~ 83 (84)
T 2kwl_A 83 K 83 (84)
T ss_dssp H
T ss_pred c
Confidence 5
No 9
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=99.76 E-value=1e-18 Score=123.60 Aligned_cols=78 Identities=42% Similarity=0.607 Sum_probs=71.8
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 67 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 67 t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
++.++.++|++++++.+++++++|+++++|..|||||||+.+||+.+||++||++||++++.++.||+++++||.++.
T Consensus 23 ~~mei~~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~~~ 100 (101)
T 4dxe_H 23 NAMENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLE 100 (101)
T ss_dssp -CTTHHHHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHcc
Confidence 345899999999999999999999999999899999999999999999999999999999999999999999998764
No 10
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=99.75 E-value=4.8e-18 Score=113.34 Aligned_cols=79 Identities=37% Similarity=0.610 Sum_probs=75.1
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 66 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 66 ~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
++++++.++|.+++++.+++++++++++++|..++|+|||+.++++..||++||++||++++.++.|++++++||.++.
T Consensus 2 m~~~~i~~~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 80 (81)
T 2lol_A 2 STTDKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKERQ 80 (81)
T ss_dssp CSHHHHHHHHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 4678999999999999999999999999999779999999999999999999999999999999999999999998764
No 11
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=99.75 E-value=3.4e-18 Score=114.82 Aligned_cols=79 Identities=39% Similarity=0.614 Sum_probs=75.3
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 66 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 66 ~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
.+++++.++|++++++.+++++++++++++|..+||+|||+.+++++.||++||++||++++.++.|++++++||.++.
T Consensus 3 ~~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2qnw_A 3 SDDRPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK 81 (82)
T ss_dssp CCSHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHhc
Confidence 5678999999999999999999999999999779999999999999999999999999999999999999999999874
No 12
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=99.75 E-value=4.7e-18 Score=113.77 Aligned_cols=80 Identities=34% Similarity=0.475 Sum_probs=74.8
Q ss_pred ChHHHHHHHHHHHHhhhCCCCC-CCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 032037 67 NPDEIMHRVIALVKKFDKTDAH-KVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 145 (148)
Q Consensus 67 t~~eI~~~I~~il~~~l~vd~~-~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~~ 145 (148)
+++++.++|.+++++.++++++ +++++++| .+||+|||+.+++++.||++||++||++++.++.|++++++||.++..
T Consensus 1 ~~~~i~~~l~~i~~~~l~~~~~~~i~~~~~l-~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 79 (82)
T 2ava_A 1 AKKETIDKVSDIVKEKLALGADVVVTADSEF-SKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLE 79 (82)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSSSCCCSSCCS-CCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhCCCcccccCCCCch-hhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHh
Confidence 4678999999999999999887 89999999 599999999999999999999999999999999999999999998876
Q ss_pred CC
Q 032037 146 EK 147 (148)
Q Consensus 146 ak 147 (148)
+|
T Consensus 80 ~~ 81 (82)
T 2ava_A 80 KK 81 (82)
T ss_dssp HC
T ss_pred cC
Confidence 54
No 13
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=99.75 E-value=1e-17 Score=111.66 Aligned_cols=80 Identities=31% Similarity=0.532 Sum_probs=76.1
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 65 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
+++++++.++|.+++++.+++++++++++++|..++|+|||+.++++..||++||++||.+++.++.|++++++||.++.
T Consensus 2 ~m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2cnr_A 2 AATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQ 81 (82)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHSB
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHHc
Confidence 36889999999999999999999999999999779999999999999999999999999999999999999999998765
No 14
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=99.74 E-value=1.2e-18 Score=116.31 Aligned_cols=79 Identities=34% Similarity=0.556 Sum_probs=72.0
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 65 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
+++++++.++|.+++++.+++++++++++++|..++|+|||+.++++..||++||++||++++.++.|++++++||.++
T Consensus 2 ~m~~~~i~~~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (81)
T 1f80_D 2 PLGSADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ 80 (81)
T ss_dssp ---CCHHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHhh
Confidence 5678899999999999999999999999999988999999999999999999999999999999999999999998765
No 15
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=99.74 E-value=6.9e-18 Score=120.32 Aligned_cols=80 Identities=29% Similarity=0.544 Sum_probs=76.0
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCCCCCCCCcc-----ccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHH
Q 032037 66 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQ-----KDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYI 140 (148)
Q Consensus 66 ~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~-----~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I 140 (148)
.+.++|.++|+++|++.++ ++++|+++++|. .|||||||++++|+++||++|||+||++++.++.||+++++||
T Consensus 15 ~~~~~i~~~i~~il~e~l~-~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i 93 (107)
T 3ce7_A 15 TDINAVTNYIVGMCQKFLQ-KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFV 93 (107)
T ss_dssp TCHHHHHHHHHHHHHTTBC-TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhC-CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHH
Confidence 5789999999999999999 899999999997 7999999999999999999999999999999999999999999
Q ss_pred HHhhCC
Q 032037 141 ASEAGE 146 (148)
Q Consensus 141 ~~~~~a 146 (148)
.++..+
T Consensus 94 ~~~~~~ 99 (107)
T 3ce7_A 94 VSERAK 99 (107)
T ss_dssp HHHHHS
T ss_pred HHHHHH
Confidence 988754
No 16
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=99.74 E-value=5.4e-18 Score=119.60 Aligned_cols=82 Identities=26% Similarity=0.464 Sum_probs=77.3
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 65 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
.+.++++.++|++++++.+++++++|+++++| .+||||||+.+||+++||++||++||++++.++.||+++++||.++.
T Consensus 12 ~~~~~~i~~~l~~ila~~l~v~~~~I~~d~~L-~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~~ 90 (100)
T 1vku_A 12 HMERKKLIAKFVEIASEKMGKDLETVDEENTF-KELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKL 90 (100)
T ss_dssp TTHHHHHHHHHHHHHHHTTCCCCCSCCTTSBT-TTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHCCCHHHCCCCCCH-HHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHh
Confidence 46678999999999999999999999999999 99999999999999999999999999999999999999999999887
Q ss_pred CCC
Q 032037 145 GEK 147 (148)
Q Consensus 145 ~ak 147 (148)
.++
T Consensus 91 ~~~ 93 (100)
T 1vku_A 91 EEI 93 (100)
T ss_dssp HHC
T ss_pred hhh
Confidence 543
No 17
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=99.73 E-value=1.4e-17 Score=110.31 Aligned_cols=79 Identities=38% Similarity=0.591 Sum_probs=75.5
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 66 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 66 ~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
++++++.++|.+++++.+++++++++++++|..++|+|||+.++++..||++||+++|.+++.++.|++++++||.++.
T Consensus 1 M~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 79 (80)
T 1x3o_A 1 MTEQEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAKL 79 (80)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHc
Confidence 4688999999999999999999999999999889999999999999999999999999999999999999999998875
No 18
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=99.73 E-value=6e-18 Score=122.17 Aligned_cols=85 Identities=20% Similarity=0.275 Sum_probs=70.4
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHH
Q 032037 56 LSRQMCASTSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCAD 135 (148)
Q Consensus 56 ~~r~~~~~~~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~d 135 (148)
..|+|+.. ++ ++++.++|+++|++.++ |+++++|.+|||||||+.+||+++||++|||+||++++.++.||++
T Consensus 18 ~~~~~~~~-~M-~~ei~~~v~~il~e~l~-----I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~d 90 (113)
T 2cgq_A 18 TENLYFQG-AM-EEAINATIQRILRTDRG-----ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGD 90 (113)
T ss_dssp ---------CH-HHHHHHHHHHHHTCCSC-----CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHH
T ss_pred HHHHHhcc-cc-HHHHHHHHHHHHHHHhC-----CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHH
Confidence 34566544 46 88999999999999987 8999999889999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCC
Q 032037 136 VARYIASEAGEK 147 (148)
Q Consensus 136 lv~~I~~~~~ak 147 (148)
+++||.++...+
T Consensus 91 lv~~I~~~l~~~ 102 (113)
T 2cgq_A 91 VYTSVAVWFPET 102 (113)
T ss_dssp HHHHHHTTC---
T ss_pred HHHHHHHHHhcc
Confidence 999999876543
No 19
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=99.72 E-value=2.6e-17 Score=117.81 Aligned_cols=82 Identities=27% Similarity=0.502 Sum_probs=77.9
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 65 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
+++++++.++|.+++++.+++++++|+++++|..+||+|||+.++++..||++||++||++++.++.||+++++||.++.
T Consensus 2 ~m~~~~i~~~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 81 (115)
T 1klp_A 2 PVTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLE 81 (115)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHH
Confidence 47889999999999999999999999999999779999999999999999999999999999999999999999999887
Q ss_pred CC
Q 032037 145 GE 146 (148)
Q Consensus 145 ~a 146 (148)
..
T Consensus 82 ~~ 83 (115)
T 1klp_A 82 EE 83 (115)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 20
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=99.72 E-value=1.1e-17 Score=112.54 Aligned_cols=75 Identities=17% Similarity=0.339 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHhCCccChhhhc--cCCCHHHHHHHHHHh
Q 032037 68 PDEIMHRVIALVKKFDKTDAHKVTETADFQKDLS-LDSLDRVELVMAFEEEFSVEIPEEKAD--KLTCCADVARYIASE 143 (148)
Q Consensus 68 ~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLG-lDSLd~VELv~~LEeeFgIeIp~~dl~--~~~TV~dlv~~I~~~ 143 (148)
++++.++|++++++.+++++.+++++++| .++| ||||++++|+++||++|||+||++++. ++.||+++++||.++
T Consensus 2 ~~~i~~~i~~il~~~~~~~~~~i~~d~~l-~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~ 79 (80)
T 1dv5_A 2 DEAIKNGVLDILADLTGSDDVKKNLDLNL-FETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp CHHHHHHHHHHHHHHHTSSSTTTCSSCCS-STTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCCcch-hhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHc
Confidence 56899999999999999988899999999 5666 999999999999999999999999976 999999999999875
No 21
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=99.71 E-value=2.5e-17 Score=109.14 Aligned_cols=75 Identities=43% Similarity=0.605 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 70 EIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 70 eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
++.++|++++++.+++++++++++++|..++|+|||+.++++..||++||+++|++++.++.|++++++||.++.
T Consensus 3 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 77 (78)
T 1l0i_A 3 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQ 77 (78)
T ss_dssp CHHHHHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 688999999999999999999999999779999999999999999999999999999999999999999998764
No 22
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=99.71 E-value=7.8e-18 Score=113.81 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHHHhhhCCCCC----CCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 68 PDEIMHRVIALVKKFDKTDAH----KVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 68 ~~eI~~~I~~il~~~l~vd~~----~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
++.+.++|++++++.++++++ +++++++| .+||+|||+.++++..||++||++||++++.++.|++++++||.++
T Consensus 3 ~~~~~~~l~~il~~~l~~~~~~~~~~i~~~~~l-~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 81 (86)
T 1af8_A 3 TLLTTDDLRRALVECAGETDGTDLSGDFLDLRF-EDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGA 81 (86)
T ss_dssp CSSCHHHHHHHHHTTCCCCSCCCTTTCSSTTST-TTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCcccccccCCCCCCh-hhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHH
Confidence 346788999999999999877 78999999 8999999999999999999999999999999999999999999988
Q ss_pred hCC
Q 032037 144 AGE 146 (148)
Q Consensus 144 ~~a 146 (148)
..+
T Consensus 82 ~~~ 84 (86)
T 1af8_A 82 LAE 84 (86)
T ss_dssp HHH
T ss_pred hhc
Confidence 754
No 23
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=99.70 E-value=2.2e-17 Score=116.03 Aligned_cols=77 Identities=23% Similarity=0.378 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhh------hccCCC-----HHHHHH
Q 032037 70 EIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEK------ADKLTC-----CADVAR 138 (148)
Q Consensus 70 eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~d------l~~~~T-----V~dlv~ 138 (148)
++.++|++++++.+++++++|+++++|..+||||||+.++|++.||++|||+||+++ +.++.| |+++++
T Consensus 3 ~i~~~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~~ 82 (101)
T 2kw2_A 3 STFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAA 82 (101)
T ss_dssp CHHHHHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHHH
Confidence 688999999999999999999999999889999999999999999999999999987 578899 999999
Q ss_pred HHHHhhCC
Q 032037 139 YIASEAGE 146 (148)
Q Consensus 139 ~I~~~~~a 146 (148)
||.++..+
T Consensus 83 ~i~~~~~~ 90 (101)
T 2kw2_A 83 RIDELVAA 90 (101)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99987643
No 24
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=99.69 E-value=7.9e-17 Score=114.61 Aligned_cols=76 Identities=16% Similarity=0.311 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHhhhCCC--CCCCCCCCCccccCCC-ChhHHHHHHHHHHHHhCCccChhh--hccCCCHHHHHHHHHHhh
Q 032037 70 EIMHRVIALVKKFDKTD--AHKVTETADFQKDLSL-DSLDRVELVMAFEEEFSVEIPEEK--ADKLTCCADVARYIASEA 144 (148)
Q Consensus 70 eI~~~I~~il~~~l~vd--~~~It~d~~l~~dLGl-DSLd~VELv~~LEeeFgIeIp~~d--l~~~~TV~dlv~~I~~~~ 144 (148)
++.++|+++|++.++++ +++|+++++|.+|||+ |||+.++|+++||++|||+||+++ ..++.||+++++||.++.
T Consensus 24 ~i~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~~l~~~I~~~~ 103 (105)
T 2lki_A 24 QHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKL 103 (105)
T ss_dssp CTHHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHHHHHHHHHHHh
Confidence 68899999999999998 8899999999778999 999999999999999999999999 568999999999999876
Q ss_pred C
Q 032037 145 G 145 (148)
Q Consensus 145 ~ 145 (148)
.
T Consensus 104 ~ 104 (105)
T 2lki_A 104 S 104 (105)
T ss_dssp T
T ss_pred c
Confidence 4
No 25
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.69 E-value=8.8e-17 Score=108.34 Aligned_cols=76 Identities=14% Similarity=0.295 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHhhhCCC--CCCCCCCCCccccCCC-ChhHHHHHHHHHHHHhCCccChhhhc--cCCCHHHHHHHHHHhh
Q 032037 70 EIMHRVIALVKKFDKTD--AHKVTETADFQKDLSL-DSLDRVELVMAFEEEFSVEIPEEKAD--KLTCCADVARYIASEA 144 (148)
Q Consensus 70 eI~~~I~~il~~~l~vd--~~~It~d~~l~~dLGl-DSLd~VELv~~LEeeFgIeIp~~dl~--~~~TV~dlv~~I~~~~ 144 (148)
++.++|++++++.++++ +++++++++|.+|+|+ |||+++++++.||++||++||++++. ++.|++++++||.++.
T Consensus 2 ~i~~~l~~il~~~l~~~~~~~~i~~d~~l~~dlg~~DSl~~~elv~~lE~~fgi~i~~~~l~~~~~~Tv~~l~~~i~~~~ 81 (83)
T 2amw_A 2 QHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKL 81 (83)
T ss_dssp CTHHHHHHHHHHHTTCGGGGGSCCTTSCSTTTSTTTTHHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCccccCCCcchhhhccCccCHHHHHHHHHHHHHHhCCeeCHHhhhHHhcCCHHHHHHHHHHHh
Confidence 36789999999999998 8899999999668999 99999999999999999999999964 4999999999999876
Q ss_pred C
Q 032037 145 G 145 (148)
Q Consensus 145 ~ 145 (148)
+
T Consensus 82 ~ 82 (83)
T 2amw_A 82 S 82 (83)
T ss_dssp C
T ss_pred c
Confidence 4
No 26
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=99.51 E-value=2.5e-18 Score=121.89 Aligned_cols=80 Identities=16% Similarity=0.304 Sum_probs=75.2
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 65 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
.++++ |.++|+++|++.+++++++|+++++| .+||+|||+.+||+++||++||++||++++.++.||+++++||.++.
T Consensus 22 ~M~~e-i~~~l~~ila~~l~i~~~~I~~d~~l-~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~~~ 99 (103)
T 2lte_A 22 HMPND-MEDHLLTVLSVASGVPKEEISRDSRM-EDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHR 99 (103)
Confidence 35555 99999999999999999999999999 99999999999999999999999999999999999999999999887
Q ss_pred CC
Q 032037 145 GE 146 (148)
Q Consensus 145 ~a 146 (148)
.+
T Consensus 100 ~~ 101 (103)
T 2lte_A 100 AA 101 (103)
Confidence 65
No 27
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=99.65 E-value=1.4e-16 Score=112.97 Aligned_cols=82 Identities=17% Similarity=0.317 Sum_probs=67.8
Q ss_pred CCCChHHHHHHHHHHHHhhhC--CCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhc--cCCCHHHHHHH
Q 032037 64 TSANPDEIMHRVIALVKKFDK--TDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKAD--KLTCCADVARY 139 (148)
Q Consensus 64 ~~~t~~eI~~~I~~il~~~l~--vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~--~~~TV~dlv~~ 139 (148)
++.+++++.++|+++|++.++ +++++|+++++| .|||+|||++++|+++||++|||+||++++. ++.|+++++++
T Consensus 16 ~~~~~~~i~~~i~~il~~~l~~~v~~~~i~~d~~l-~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~ 94 (105)
T 2jq4_A 16 NLYFQGHMNATIREILAKFGQLPTPVDTIADEADL-YAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDT 94 (105)
T ss_dssp -------CHHHHHHHHHHTSCCSSCGGGCCTTSCG-GGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhccCCCcccCCCCCCH-hhcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHH
Confidence 456778999999999999875 458899999999 4999999999999999999999999999986 78899999999
Q ss_pred HHHhhCC
Q 032037 140 IASEAGE 146 (148)
Q Consensus 140 I~~~~~a 146 (148)
|.....+
T Consensus 95 v~~~~~~ 101 (105)
T 2jq4_A 95 VKLILDG 101 (105)
T ss_dssp HHHHHHT
T ss_pred HHHHhcc
Confidence 9876543
No 28
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=99.65 E-value=5.3e-16 Score=101.76 Aligned_cols=76 Identities=42% Similarity=0.687 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 032037 70 EIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 145 (148)
Q Consensus 70 eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~~ 145 (148)
++.+++.+++++.+++++++++++++|..++|+|||+.++++..+|++||+++|..++.++.|++++++||.++..
T Consensus 1 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~~ 76 (77)
T 2ehs_A 1 SLEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKVG 76 (77)
T ss_dssp CHHHHHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHhc
Confidence 3678999999999999999999999998899999999999999999999999999999999999999999998753
No 29
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=99.63 E-value=9.8e-17 Score=107.69 Aligned_cols=76 Identities=14% Similarity=0.272 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhhhCCCCC-CCC--CCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhCC
Q 032037 70 EIMHRVIALVKKFDKTDAH-KVT--ETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAGE 146 (148)
Q Consensus 70 eI~~~I~~il~~~l~vd~~-~It--~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~~a 146 (148)
.+.++|++++++.++++++ +++ ++++| .++|+|||+.++++..||++||++||++++.++.|++++++||.++..+
T Consensus 4 ~~~~~l~~~l~~~l~~~~~~~i~~~~~~~~-~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 82 (83)
T 1or5_A 4 LTVDDLKKLLAETAGEDDSVDLAGELDTPF-VDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPAT 82 (83)
T ss_dssp SCHHHHHHHHHHHSCCCSSCCGGGCSSSCH-HHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCCCcH-HHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHHhcC
Confidence 5678899999999999887 899 99998 8999999999999999999999999999999999999999999887654
No 30
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=99.61 E-value=1.1e-15 Score=106.09 Aligned_cols=73 Identities=16% Similarity=0.283 Sum_probs=63.0
Q ss_pred HHHHHHHHHhhhCCC----CCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 032037 72 MHRVIALVKKFDKTD----AHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 145 (148)
Q Consensus 72 ~~~I~~il~~~l~vd----~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~~ 145 (148)
.++|.+++.+.++++ +++++++++| .+||+|||+.++|++.||++||++||++++.++.|++++++||.++..
T Consensus 6 ~~~l~~ii~~~l~~~~~~~~~~i~~d~~~-~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~ 82 (95)
T 1nq4_A 6 LSDLLTLLRECAGEEESIDLGGDVEDVAF-DALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLT 82 (95)
T ss_dssp HHHHHHHHHHHHTCSSTTCSCSCCSSSCH-HHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccccccccCCCCCCh-hhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHHh
Confidence 345556666666554 4489999999 799999999999999999999999999999999999999999998764
No 31
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=99.60 E-value=8.3e-17 Score=106.64 Aligned_cols=75 Identities=47% Similarity=0.680 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 70 EIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 70 eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
++.++|.+++++.+++++++++++++|..++|+|||+.++++..||++||+++|..++.++.|++++++||.++.
T Consensus 4 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 78 (79)
T 2l3v_A 4 DTAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKAS 78 (79)
T ss_dssp HHHHHHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 789999999999999999999999999789999999999999999999999999999999999999999998765
No 32
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=99.59 E-value=5.4e-17 Score=111.87 Aligned_cols=78 Identities=18% Similarity=0.347 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhhhC--------CCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccC---hhhhccCCCHHHHH
Q 032037 69 DEIMHRVIALVKKFDK--------TDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIP---EEKADKLTCCADVA 137 (148)
Q Consensus 69 ~eI~~~I~~il~~~l~--------vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp---~~dl~~~~TV~dlv 137 (148)
+++.++|+++|++.++ +++++++++++| .+||||||++++|+++||++||++|| +.++.++.|+++++
T Consensus 3 ~~i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l-~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~ 81 (92)
T 1fh1_A 3 DQLTLEIISAINKLVKAENGERTSVALGEITTDTEL-TSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVV 81 (92)
T ss_dssp --CHHHHHHHHHHHC-----------------------------CTTTTHHHHHHHC-----------------CTTTST
T ss_pred hHHHHHHHHHHHHHHHhccccccCCCHhhCCCCCCH-hhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHH
Confidence 3577888888888877 455699999999 99999999999999999999999999 67889999999999
Q ss_pred HHHHHhhCCC
Q 032037 138 RYIASEAGEK 147 (148)
Q Consensus 138 ~~I~~~~~ak 147 (148)
+||.++..++
T Consensus 82 ~~i~~~~~~~ 91 (92)
T 1fh1_A 82 EAVRGLLTKE 91 (92)
T ss_dssp HHHHC-----
T ss_pred HHHHHHhhcc
Confidence 9999887665
No 33
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=99.54 E-value=4.4e-14 Score=94.49 Aligned_cols=80 Identities=15% Similarity=0.157 Sum_probs=75.4
Q ss_pred CCCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 64 TSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 64 ~~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
.+.+.+++.+.+.+++++.+++++++++++.+| .++|+|||..+++...|+++||+++|..++.+..|++++++||.++
T Consensus 8 ~~~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~-~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~ 86 (88)
T 2afd_A 8 QPASVEDIQSWLIDQFAQQLDVDPDDIDMEESF-DNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGEL 86 (88)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTSCGGGCCTTSCG-GGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCH-HHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 456778999999999999999998999999999 7999999999999999999999999999999999999999999876
Q ss_pred h
Q 032037 144 A 144 (148)
Q Consensus 144 ~ 144 (148)
.
T Consensus 87 ~ 87 (88)
T 2afd_A 87 Y 87 (88)
T ss_dssp T
T ss_pred h
Confidence 5
No 34
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=99.51 E-value=3.6e-14 Score=95.72 Aligned_cols=79 Identities=15% Similarity=0.292 Sum_probs=73.7
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccCh--hhhccCCCHHHHHHHHHH
Q 032037 65 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPE--EKADKLTCCADVARYIAS 142 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~--~dl~~~~TV~dlv~~I~~ 142 (148)
....+++.+.|.+++++.+++++++++++.+| .++|+|||+.++++..++++||+++|. .++....|++++++||.+
T Consensus 6 ~~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~-~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 6 VGVSNEKLDAVMRVVSEESGIALEELTDDSNF-ADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp CCCCHHHHHHHHHHHHHHHCCCGGGCCTTCBH-HHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred CCccHHHHHHHHHHHHHHHCcCHHHCCCCCCH-HHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 34567899999999999999999999999999 899999999999999999999999999 899999999999999987
Q ss_pred hh
Q 032037 143 EA 144 (148)
Q Consensus 143 ~~ 144 (148)
..
T Consensus 85 ~~ 86 (89)
T 2kr5_A 85 SG 86 (89)
T ss_dssp TT
T ss_pred hC
Confidence 54
No 35
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=99.49 E-value=4.9e-14 Score=96.36 Aligned_cols=81 Identities=21% Similarity=0.293 Sum_probs=75.9
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 65 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
..+.+++.+.|.+++++.+++++++++++.+| .++|+|||+.+++...|+++||+++|..++....|++++++||.++.
T Consensus 16 ~~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~-~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~ 94 (99)
T 2liu_A 16 QVNLSEIKQVLKQQLAEALYTEESEIAEDQKF-VDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQIL 94 (99)
T ss_dssp CCCHHHHHHHHHHHHHHHTTSCGGGCCSSSCH-HHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCH-HHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 35788999999999999999999999999999 79999999999999999999999999999999999999999999876
Q ss_pred CC
Q 032037 145 GE 146 (148)
Q Consensus 145 ~a 146 (148)
..
T Consensus 95 ~~ 96 (99)
T 2liu_A 95 SS 96 (99)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 36
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=99.42 E-value=4.5e-13 Score=93.29 Aligned_cols=70 Identities=17% Similarity=0.241 Sum_probs=63.0
Q ss_pred HHHHHHHHhhhCCC-CCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 73 HRVIALVKKFDKTD-AHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 73 ~~I~~il~~~l~vd-~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
+.|++.++++++++ +++|+++..| .+||+|||+.|||.++||++||+++|..++..+ |++++++++....
T Consensus 9 ~~v~~~va~iLg~~~~~~I~~~~~l-~dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~~-Ti~~La~~v~~~~ 79 (91)
T 2cg5_B 9 RDLVEAVAHILGIRDLAAVNLDSSL-ADLGLDALMSVEVRQTLERELNLVLSVREVRQL-TLRKLQELSSKAD 79 (91)
T ss_dssp TTHHHHHHHHTTCCSCTTSCTTSBT-TTTTCCHHHHHHHHHHHHHHHCCCCCHHHHHTC-BHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHCCCchhhCCCCCCH-HHhCCcchHHHHHHHHHHHHHCCCCCHHHHHhC-CHHHHHHHHhccc
Confidence 46778889999995 6899999999 899999999999999999999999999999886 9999999987543
No 37
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=99.41 E-value=3.3e-13 Score=91.96 Aligned_cols=76 Identities=22% Similarity=0.284 Sum_probs=71.3
Q ss_pred hHHHHHHHHHHHHhhhC-CCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 68 PDEIMHRVIALVKKFDK-TDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 68 ~~eI~~~I~~il~~~l~-vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
.+.+.+.|.+++++.++ .++++++++.+| .++|+|||+.+++...++++||+++|..++.+..|++++++||.++.
T Consensus 18 ~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f-~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 18 TAELVRLVRTSTATVLGHDDPKAVRATTPF-KELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHHHHHHHTTCCCGGGCCSSSCH-HHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCChhhCCCCCCH-HHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 46788899999999999 788899999999 89999999999999999999999999999999999999999998765
No 38
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.41 E-value=3.6e-13 Score=104.57 Aligned_cols=85 Identities=12% Similarity=0.219 Sum_probs=75.5
Q ss_pred HhcCCCCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHH
Q 032037 60 MCASTSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARY 139 (148)
Q Consensus 60 ~~~~~~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~ 139 (148)
+......+++++.++|.+++++.+++++++|+++.+| .+||+|||+.++++..|+++||++||..++.+..|++++++|
T Consensus 16 ~~~~~~~~~~~i~~~l~~~~a~~l~~~~~~i~~~~~f-~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~ 94 (212)
T 2l22_A 16 PRGSHMVADDECAQFLRQSLAAMLYCEPGQIRDGSRF-LELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQW 94 (212)
T ss_dssp ------CCTTHHHHHHHHHHHHHTTCCTTSCCTTCBH-HHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCH-HHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHH
Confidence 3445557888999999999999999999999999999 799999999999999999999999999999999999999999
Q ss_pred HHHhhC
Q 032037 140 IASEAG 145 (148)
Q Consensus 140 I~~~~~ 145 (148)
|.++..
T Consensus 95 l~~~~~ 100 (212)
T 2l22_A 95 VGTQLQ 100 (212)
T ss_dssp HHTTSC
T ss_pred HHHhcc
Confidence 987654
No 39
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.32 E-value=6e-12 Score=97.63 Aligned_cols=79 Identities=14% Similarity=0.200 Sum_probs=73.9
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhCC
Q 032037 67 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAGE 146 (148)
Q Consensus 67 t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~~a 146 (148)
+++++.++|.+++++.+++++++++++.+| .++|+|||+.++++..|+++||+++|..++.+..|++++++||.++...
T Consensus 127 ~~~~i~~~l~~~~~~~l~~~~~~i~~~~~f-~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~~~ 205 (212)
T 2l22_A 127 QRESIQDYLKQSLGELLFLDPGQLRSGAQF-LDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRVQL 205 (212)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSSCCSSCCG-GGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHHCCChhhCCCCCCH-HHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhcc
Confidence 457899999999999999999999999999 7999999999999999999999999999999999999999999987654
No 40
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=99.31 E-value=7.9e-12 Score=85.70 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhCC
Q 032037 68 PDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAGE 146 (148)
Q Consensus 68 ~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~~a 146 (148)
.+++.+.|.+++++++++ ++++++.+| .++|.|||..++++..|+++||+++|..++....|+++++++|.+....
T Consensus 14 ~~~~e~~l~~i~~~vL~~--~~i~~~~~F-f~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~~ 89 (93)
T 4i4d_A 14 RRALERDIAAIWAETLGR--DSVGPHEDF-AALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLTG 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHTC--SCCCTTCCT-TTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHhCC--CCCCCCCCH-HHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHccc
Confidence 468899999999999998 469999999 7999999999999999999999999999999999999999999987654
No 41
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=99.29 E-value=1.1e-11 Score=84.95 Aligned_cols=74 Identities=14% Similarity=0.235 Sum_probs=68.1
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 67 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 67 t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
...++.++|.++++++++++ +++++++| .++|.|||..++++..|+++||+++|..++.+..|+++++++|.+.
T Consensus 11 p~~~~e~~l~~i~~~vL~~~--~i~~~~~F-f~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 11 PTNAVESKLAEIWERVLGVS--GIGILDNF-FQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp CSSHHHHHHHHHHHHHHTCS--SCCSSCCT-TSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCCH-HHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 44678899999999999985 69999999 7999999999999999999999999999999999999999999764
No 42
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.84 E-value=8.4e-09 Score=83.57 Aligned_cols=76 Identities=17% Similarity=0.143 Sum_probs=68.6
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 66 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 66 ~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
..+++++..|.++++++++++. |..+.+| .++|.|||..++++..|+++||++++..++.+..|+++++++|.+..
T Consensus 7 ~p~~~~e~~l~~~~~~~l~~~~--i~~~~~f-f~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~~ 82 (329)
T 3tej_A 7 APKAGSETIIAAAFSSLLGCDV--QDADADF-FALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEE 82 (329)
T ss_dssp CCCTTHHHHHHHHHHHHHTC-C--CSTTCBT-TTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSCT
T ss_pred CCCCHHHHHHHHHHHHHhCCCC--CCCCCCH-HHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhhc
Confidence 3445788999999999999865 8999999 89999999999999999999999999999999999999999998654
No 43
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=1.2e-08 Score=73.08 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHHhhhC-CCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhC-CccChhhhccCCCHHHHHHHHHHhh
Q 032037 68 PDEIMHRVIALVKKFDK-TDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFS-VEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 68 ~~eI~~~I~~il~~~l~-vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFg-IeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
+.+++.+|.++++++++ + ..|.++++| -++|-|||.++.|+.+|+++|+ +++|..++....|+++++.+|.++.
T Consensus 23 ~~~~E~~La~iW~~vL~~~--~~i~~~ddF-F~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~~ 98 (110)
T 2cq8_A 23 ELVTAEAVRSVWQRILPKV--LEVEDSTDF-FKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKL 98 (110)
T ss_dssp HHHHHHHHHHHHHHHCSSC--SCCCTTCBH-HHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCC--CCCCCCCCH-HhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 46789999999999998 5 459999999 6999999999999999999999 9999999999999999999998765
No 44
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.44 E-value=5.5e-07 Score=76.45 Aligned_cols=74 Identities=18% Similarity=0.224 Sum_probs=68.1
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 67 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 67 t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
...+++..|.++++++++++ .|..+.+| -+||.|||..++++..++++||++++..++.+..|++++++++...
T Consensus 7 p~~~~e~~l~~iw~~vL~~~--~i~~~d~f-f~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 7 PRSVWEARLAQVWEQVLNVP--QVGALDDF-FALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp CCSHHHHHHHHHHHHHHTCS--CCCTTCBT-TTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCccH-HHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence 34578899999999999985 69999999 8999999999999999999999999999999999999999999764
No 45
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=98.36 E-value=6.3e-07 Score=72.45 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=62.1
Q ss_pred HHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHH
Q 032037 73 HRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIA 141 (148)
Q Consensus 73 ~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~ 141 (148)
+++...+++.+ ++++++.++.+| .++|+||+.++.++..++++ |++++..++.+..|++++.+++.
T Consensus 218 dwlr~~va~~L-~~~~~i~~~~nL-~~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 218 AALREVILPLL-DESDEPFDDDNL-IDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp HHHHHHHGGGC-CCSSCCCTTSCS-GGGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCHhhcCCCCCH-HHhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHH
Confidence 45778899999 888999999999 89999999999999999998 99999999999999999999997
No 46
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.05 E-value=6e-06 Score=78.26 Aligned_cols=76 Identities=12% Similarity=0.215 Sum_probs=69.1
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 66 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 66 ~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
....++++.+.++++++++++ .|..+.+| -+||.|||..++++..|+++||+++|..++.+..|+.+++++|....
T Consensus 968 ~p~~~~e~~l~~~~~~vL~~~--~i~~~~~f-f~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~~ 1043 (1304)
T 2vsq_A 968 GPRNEMEETIAQIWSEVLGRK--QIGIHDDF-FALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNGG 1043 (1304)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS--CCCTTCCT-TTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHTT
T ss_pred CCCChHHHHHHHHHHHHcCCC--ccCCCCCH-HHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhcC
Confidence 345678899999999999984 58999999 79999999999999999999999999999999999999999998643
No 47
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=97.95 E-value=1.1e-06 Score=75.21 Aligned_cols=74 Identities=18% Similarity=0.282 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 67 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 67 t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
...+++..|.++++++++++ +|..+.+| -++|.|||.++.|+..|++ ||+++|..++.+..|+++++++|.+..
T Consensus 42 p~~~~e~~l~~~w~~~l~~~--~i~~~~~f-f~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 42 PSNEIEQTFVDVFGEVLKQN--DVGVDDDF-FELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCCh-HHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 34578889999999999986 68999999 7999999999999999986 999999999999999999999997653
No 48
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=97.82 E-value=2.2e-05 Score=68.57 Aligned_cols=72 Identities=11% Similarity=0.094 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 70 EIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 70 eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
.....+.+++.+.++. .+++..+.+| -+||.|||.+++|+..|++ ++++++..++.+..|+.+++++|.++.
T Consensus 545 ~~~~~l~~~~~~~l~~-~~~~~~~d~F-f~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~~ 616 (617)
T 3rg2_A 545 ASKAALREVILPLLDE-SDEPFDDDNL-IDYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSREV 616 (617)
T ss_dssp CSHHHHHHHHGGGSCT-TCCCCTTSCG-GGGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC--
T ss_pred ccHHHHHHHHHHHhcc-CCCCCCCCCh-hhcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhhc
Confidence 3456778888888863 3468889999 8999999999999999987 789999999999999999999997653
No 49
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=97.76 E-value=3.5e-06 Score=74.22 Aligned_cols=75 Identities=13% Similarity=0.040 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHH-HhCCccChhhhccCCCHHHHHHHHHHhh
Q 032037 67 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEE-EFSVEIPEEKADKLTCCADVARYIASEA 144 (148)
Q Consensus 67 t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEe-eFgIeIp~~dl~~~~TV~dlv~~I~~~~ 144 (148)
..++.+..+.+++++.++++ .+..+.+| -+||.|||.++.|+..|++ .||++++..++.+..|+.+++.+|.+..
T Consensus 521 ~~~~~e~~l~~iw~~vL~~~--~~~~~d~F-f~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~~ 596 (620)
T 4dg8_A 521 ALDPDQRGCAQLWSELLGCE--VGAADQDF-FLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHG 596 (620)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCCh-hhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhcC
Confidence 34567888999999999984 47888999 7999999999999999999 8999999999999999999999998653
No 50
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.15 E-value=6.2e-05 Score=76.11 Aligned_cols=70 Identities=16% Similarity=0.205 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhCCC-CCCCCCCCCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 72 MHRVIALVKKFDKTD-AHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 72 ~~~I~~il~~~l~vd-~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
.+.+.+++++.++++ .++|+++.+| .+||+|||..+||...|+++||+++|..++.. .|+..+.+++...
T Consensus 2125 ~~~l~~~~a~vL~~~~~~~i~~~~~~-~~lG~DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2125 QKDLVKAVAHILGIRDVASINPDSTL-VDLGLDSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp -------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCcccccCCCCch-HHhCcchHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 456888999999986 5789999999 99999999999999999999999999988866 6888887776543
No 51
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=83.49 E-value=0.22 Score=51.78 Aligned_cols=54 Identities=13% Similarity=0.190 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhCCCCCCCCCCCCccccC-CCChhHHHHHHHHHHHHhCCccChh
Q 032037 71 IMHRVIALVKKFDKTDAHKVTETADFQKDL-SLDSLDRVELVMAFEEEFSVEIPEE 125 (148)
Q Consensus 71 I~~~I~~il~~~l~vd~~~It~d~~l~~dL-GlDSLd~VELv~~LEeeFgIeIp~~ 125 (148)
..+.+..+++..+|..+++|.++.++ ++| |.+|....||++.|+.|||..+|+.
T Consensus 1795 a~~~~~~liA~~~k~~~~~i~~~~~i-~~L~gg~St~~nell~dl~~efg~~~p~~ 1849 (3089)
T 3zen_D 1795 AADATVALIALSAKMRIDQIEALDSI-ESITDGASSRRNQLLVDLGSELNLGAIDG 1849 (3089)
T ss_dssp --------------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCChhHCCccccH-HHHhCCchHHHHHHHHHHHHHhCCCCCCc
Confidence 46678889999999999999999999 676 9999999999999999999977764
No 52
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=79.62 E-value=1.8 Score=25.11 Aligned_cols=21 Identities=33% Similarity=0.493 Sum_probs=17.8
Q ss_pred CCChhHHHHHHHHHHHHhCCc
Q 032037 101 SLDSLDRVELVMAFEEEFSVE 121 (148)
Q Consensus 101 GlDSLd~VELv~~LEeeFgIe 121 (148)
++.=+...||+..+|++|||.
T Consensus 12 ~lTvlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 12 KLTVSELAELVKKLEDKFGVT 32 (40)
T ss_dssp TSCHHHHHHHHHHHHHHTCCC
T ss_pred hCcHHHHHHHHHHHHHHHCCC
Confidence 445578899999999999997
No 53
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=73.51 E-value=2.5 Score=22.96 Aligned_cols=17 Identities=29% Similarity=0.464 Sum_probs=14.2
Q ss_pred ChhHHHHHHHHHHHHhC
Q 032037 103 DSLDRVELVMAFEEEFS 119 (148)
Q Consensus 103 DSLd~VELv~~LEeeFg 119 (148)
.=+.+.|++.++|++||
T Consensus 14 TvlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 14 TVSELAELVKKLEDKFG 30 (30)
T ss_dssp BHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHhC
Confidence 34677899999999997
No 54
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=66.00 E-value=5.3 Score=27.47 Aligned_cols=70 Identities=10% Similarity=0.076 Sum_probs=54.2
Q ss_pred hhhHHHHHHH---hcC--CCCChHHHHHHHHHHHHhhhC---CCCCCCCCCCCccccCCCChhHHHHHHHHHHHHhCC
Q 032037 51 NVLKQLSRQM---CAS--TSANPDEIMHRVIALVKKFDK---TDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSV 120 (148)
Q Consensus 51 ~~~~~~~r~~---~~~--~~~t~~eI~~~I~~il~~~l~---vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFgI 120 (148)
+.++.+...+ ... ..+++.+|...|.+.|++.-= -+...|..|..|..-+|-|++.+.++-..|...|--
T Consensus 15 w~S~eLa~fl~~iG~~~~~~~sR~eVvk~lW~YIK~nnLQdp~~Kr~I~cD~kLk~lFg~~~v~~~~m~klL~~Hl~~ 92 (101)
T 1v32_A 15 WGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKE 92 (101)
T ss_dssp SSCHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHHHHHHSCS
T ss_pred cCCHHHHHHHHHcCCCCccccCHHHHHHHHHHHHHhhcCcCcccCCeeeccHHHHHHHCCCcccHHHHHHHHHHHcCc
Confidence 4445665544 442 469999999999999998832 244568899999778899999999999999988754
No 55
>3ufe_A Transcriptional antiterminator (BGLG family); extended helix bundle, arcimboldo; 1.50A {Bacillus subtilis} PDB: 3gwh_A
Probab=47.70 E-value=12 Score=24.46 Aligned_cols=21 Identities=14% Similarity=0.276 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhCCccChhhh
Q 032037 107 RVELVMAFEEEFSVEIPEEKA 127 (148)
Q Consensus 107 ~VELv~~LEeeFgIeIp~~dl 127 (148)
+.++...||+.||+++|++|+
T Consensus 79 a~~i~~~ie~~~~i~i~~~Ei 99 (111)
T 3ufe_A 79 AWKLIKILQQTLKKPVHEAEA 99 (111)
T ss_dssp HHHHHHHHHHHHCSCCCTHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 457888999999999999985
No 56
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=45.96 E-value=38 Score=21.51 Aligned_cols=44 Identities=14% Similarity=0.324 Sum_probs=32.3
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCCCCCCCCccccCCCChhHHHHHHHHHHHHh-CCccChhh
Q 032037 65 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEF-SVEIPEEK 126 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l~vd~~~It~d~~l~~dLGlDSLd~VELv~~LEeeF-gIeIp~~d 126 (148)
..+.+++...|.++|+.. | ++++..=.+-..||+.| |+++.+..
T Consensus 11 ~Psd~ei~~~I~~IL~~a---D---------------L~tvT~K~VR~~Le~~~pg~dLs~kK 55 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASA---N---------------LEEVTMKQICKKVYENYPTYDLTERK 55 (70)
T ss_dssp CCCHHHHHHHHHHHHTTS---C---------------GGGCCHHHHHHHHHHHCSSSCCSHHH
T ss_pred CcCHHHHHHHHHHHHHhC---C---------------HHHHhHHHHHHHHHHHccCCCChHHH
Confidence 457788888888888753 2 23444556889999999 99998643
No 57
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=45.56 E-value=8.5 Score=25.83 Aligned_cols=58 Identities=9% Similarity=0.053 Sum_probs=47.5
Q ss_pred cCCCCChHHHHHHHHHHHHhhhCC---CCCCCCCCCCccccCCCChhHHHHHHHHHHHHhC
Q 032037 62 ASTSANPDEIMHRVIALVKKFDKT---DAHKVTETADFQKDLSLDSLDRVELVMAFEEEFS 119 (148)
Q Consensus 62 ~~~~~t~~eI~~~I~~il~~~l~v---d~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFg 119 (148)
....+++.+|...|.+.|++.-=. +...|..|..|..-+|-|++.+.++-..|...|.
T Consensus 23 G~~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~Lk~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1uhr_A 23 GIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLM 83 (93)
T ss_dssp CCSEEEHHHHHHHHHHHHHHTTCBCSSCSSEECCCTTHHHHTCCSSEEGGGSHHHHHHHEE
T ss_pred CCCccCHHHHHHHHHHHHHhccCCCccccceeechHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 445689999999999999987322 3456899999977899999999999999888764
No 58
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=44.64 E-value=28 Score=22.28 Aligned_cols=33 Identities=12% Similarity=0.335 Sum_probs=22.7
Q ss_pred HHHHHHHhCCc-cChhhhccCCCHHHHHHHHHHh
Q 032037 111 VMAFEEEFSVE-IPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 111 v~~LEeeFgIe-Ip~~dl~~~~TV~dlv~~I~~~ 143 (148)
+..+++.||++ +|+++.+...|++.++-....+
T Consensus 19 l~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~~lg~ 52 (86)
T 2pls_A 19 VPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGR 52 (86)
T ss_dssp HHHHHHHHTCSCCTTTTSCSCCBHHHHHHHHHTS
T ss_pred HHHHHHHhCCCcCCCccCCCcccHHHHHHHHhCC
Confidence 35678889998 9864224678998887554443
No 59
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=43.11 E-value=23 Score=23.25 Aligned_cols=33 Identities=12% Similarity=0.240 Sum_probs=18.4
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 111 VMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 111 v~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
+..+++.||+++|.++-+...|++.++-....+
T Consensus 28 l~dl~~~l~~~l~~~~~~~~dTlgG~i~~~lg~ 60 (94)
T 2oai_A 28 IEELREVLGAELPDGEENNYHTLAGMCISYFGR 60 (94)
T ss_dssp HHHHHHHHTC-------CCCSBHHHHHHHHHSS
T ss_pred HHHHHHHhCCCCCcccCCCCccHHHHHHHHhCC
Confidence 456788899999873224678999887554443
No 60
>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} SCOP: a.251.1.1 PDB: 2c5r_A 1zae_A
Probab=42.96 E-value=30 Score=21.73 Aligned_cols=32 Identities=22% Similarity=0.440 Sum_probs=25.6
Q ss_pred HHHHHhCCccChhh-----hccCCCHHHHHHHHHHhh
Q 032037 113 AFEEEFSVEIPEEK-----ADKLTCCADVARYIASEA 144 (148)
Q Consensus 113 ~LEeeFgIeIp~~d-----l~~~~TV~dlv~~I~~~~ 144 (148)
.+-++-||.||.+- .+++.|-+++.+||+.+.
T Consensus 14 DlYe~SnIrIP~DIIEdl~~~~L~te~EVmnYiEnqR 50 (67)
T 2bnk_A 14 DLYEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQR 50 (67)
T ss_dssp HHHHHTTCCCCHHHHHHHHTTCCCCSHHHHHHHHHHH
T ss_pred HHHHHcCCcCcHHHHHHHHHHhhhhHHHHHHHHHhhH
Confidence 44567799999864 378899999999999764
No 61
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=40.03 E-value=8 Score=25.92 Aligned_cols=66 Identities=14% Similarity=0.079 Sum_probs=50.6
Q ss_pred hHHHHHHHhcCCCCChHHHHHHHHHHHHhhhCCC---CCCCCCCCCccccCCCChhHHHHHHHHHHHHhC
Q 032037 53 LKQLSRQMCASTSANPDEIMHRVIALVKKFDKTD---AHKVTETADFQKDLSLDSLDRVELVMAFEEEFS 119 (148)
Q Consensus 53 ~~~~~r~~~~~~~~t~~eI~~~I~~il~~~l~vd---~~~It~d~~l~~dLGlDSLd~VELv~~LEeeFg 119 (148)
++.+.. +-....+++.+|...|.+.|++.-=.| ...|..|..|..-+|-|++.+.++-..|...|.
T Consensus 15 S~~La~-~lG~~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~L~~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1v31_A 15 STALMD-VLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLS 83 (93)
T ss_dssp CHHHHH-HSCCSEECSHHHHHHHHHHHHHTTCBCSSCSSEEECCSHHHHHSCSSEEETTTTHHHHHHHCB
T ss_pred CHHHHH-HHCCCccCHHHHHHHHHHHHHHccCcCcccCceeehhHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 355543 334456899999999999999883333 345888999977889999999999999988764
No 62
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=38.65 E-value=36 Score=21.68 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=21.4
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 111 VMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 111 v~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
+..+++.||+++|++ ...|++.++-....+
T Consensus 19 l~dl~~~l~~~l~~~---~~~Tl~G~i~~~lg~ 48 (83)
T 3llb_A 19 VDAFNDFFGSEFSDE---EFDTVGGLVMSAFGH 48 (83)
T ss_dssp HHHHHHHHCCCCCTT---TCSBHHHHHHHHHSS
T ss_pred HHHHHHHhCCCCCCC---CCcCHHHHHHHHhCc
Confidence 346788999999864 567988887554433
No 63
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=37.04 E-value=42 Score=22.88 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=24.1
Q ss_pred HHHHHHHhCCc--cChhhhccCCCHHHHHHHHHHh
Q 032037 111 VMAFEEEFSVE--IPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 111 v~~LEeeFgIe--Ip~~dl~~~~TV~dlv~~I~~~ 143 (148)
+..+++.||++ +|.++-....|++.++-....+
T Consensus 45 l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~lg~ 79 (113)
T 3ded_A 45 LDRFREFFELEAPLPGEAGGNIHTLAGVMLYQLGR 79 (113)
T ss_dssp HHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHCS
T ss_pred HHHHHHHhCCCccCCcccCCCCccHHHHHHHHhCC
Confidence 45778899999 9874445788999887655443
No 64
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=36.37 E-value=37 Score=21.76 Aligned_cols=29 Identities=14% Similarity=0.192 Sum_probs=20.9
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHH
Q 032037 111 VMAFEEEFSVEIPEEKADKLTCCADVARYIAS 142 (148)
Q Consensus 111 v~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~ 142 (148)
+..+++.||+++|++ ...|++.++-....
T Consensus 18 l~dl~~~l~~~l~~~---~~dTl~G~v~~~lg 46 (87)
T 2rk5_A 18 LNDFNEYFETDLESD---NVDTIAGFYLTGVG 46 (87)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCC---CcccHHHHHHHHhC
Confidence 356788899999864 47798888654433
No 65
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=35.97 E-value=37 Score=22.88 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=21.5
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 111 VMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 111 v~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
+..+++.||+++|++ ...|++.++-....+
T Consensus 22 l~dl~~~lg~~l~~e---~~dTlgGli~~~lg~ 51 (101)
T 2p3h_A 22 LDEVERAIGYELPEG---DYETISGLLFDHANA 51 (101)
T ss_dssp HHHHHHHHTSCCCCS---SCCBHHHHHHHHHCS
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHHHhCC
Confidence 356788899999863 578998887554433
No 66
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=32.95 E-value=33 Score=21.70 Aligned_cols=27 Identities=11% Similarity=0.100 Sum_probs=19.8
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHH
Q 032037 111 VMAFEEEFSVEIPEEKADKLTCCADVARYI 140 (148)
Q Consensus 111 v~~LEeeFgIeIp~~dl~~~~TV~dlv~~I 140 (148)
+..+++.||+++|++ +..|++.++-..
T Consensus 19 l~dl~~~l~~~l~~~---~~~Tl~G~i~~~ 45 (81)
T 3lae_A 19 LRDLNKMFNWELDTE---DARTFNGLILEH 45 (81)
T ss_dssp HHHHHHHHCCCCCCS---SCSBHHHHHHHH
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHHH
Confidence 346788999999863 567888876543
No 67
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=31.78 E-value=49 Score=21.36 Aligned_cols=30 Identities=10% Similarity=0.079 Sum_probs=21.4
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 111 VMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 111 v~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
+..+++.||+++|.+ ...|++.++-....+
T Consensus 28 l~dl~~~l~~~l~~~---~~dTlgG~i~~~lg~ 57 (91)
T 2pli_A 28 IEDINTFFGTEYSSE---EADTIGGLVIQELGH 57 (91)
T ss_dssp HHHHHHHHCCCCCCS---SCCBHHHHHHHHHSS
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHHHhCC
Confidence 356788899999863 577998887554433
No 68
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=31.75 E-value=52 Score=21.16 Aligned_cols=31 Identities=6% Similarity=0.119 Sum_probs=21.5
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHH
Q 032037 111 VMAFEEEFSVEIPEEKADKLTCCADVARYIAS 142 (148)
Q Consensus 111 v~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~ 142 (148)
+..+++.||+++|++ -+...|++.++-....
T Consensus 25 l~dl~~~l~~~l~~~-~~~~~TlgG~i~~~lg 55 (90)
T 2p13_A 25 IRKASNLLEHDLVDE-AERYSTLGGYLLWQFG 55 (90)
T ss_dssp HHHHHHHHTSCCCCT-TCCCCBHHHHHHHHHS
T ss_pred HHHHHHHHCCCCCCc-CCCCccHHHHHHHHhC
Confidence 456788899999863 2357899888654443
No 69
>3rio_A PTSGHI operon antiterminator; twisted beta sheet, four helix bundle, transcriptional antitermination, transcription; 1.99A {Bacillus subtilis}
Probab=31.75 E-value=28 Score=25.47 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhCCccChhhh
Q 032037 107 RVELVMAFEEEFSVEIPEEKA 127 (148)
Q Consensus 107 ~VELv~~LEeeFgIeIp~~dl 127 (148)
+.+++..|++.|++++|++|+
T Consensus 147 a~~~~~~Ie~~~~i~lpedEi 167 (180)
T 3rio_A 147 AKEVIDMINEKAGLCLPEGEI 167 (180)
T ss_dssp HHHHHHHHHHHHTSCCCTTHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 457888999999999999985
No 70
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=30.87 E-value=51 Score=21.26 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=21.4
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 032037 111 VMAFEEEFSVEIPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 111 v~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~~~ 143 (148)
+..+++.||+++|.+ ...|++.++-....+
T Consensus 26 l~dl~~~l~~~l~~~---~~~TlgG~i~~~lg~ 55 (93)
T 2r2z_A 26 IDEFNEVFETDLHMS---DVDTMAGYLITALGT 55 (93)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHHHSS
T ss_pred HHHHHHHhCCCCCCC---CcccHHHHHHHHhCC
Confidence 456788899999864 478998887554433
No 71
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=28.20 E-value=1.2e+02 Score=30.56 Aligned_cols=66 Identities=20% Similarity=0.186 Sum_probs=50.4
Q ss_pred HHHHHHHHHhhhCCCCCCCCCCCCccccC-CCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHH
Q 032037 72 MHRVIALVKKFDKTDAHKVTETADFQKDL-SLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIA 141 (148)
Q Consensus 72 ~~~I~~il~~~l~vd~~~It~d~~l~~dL-GlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV~dlv~~I~ 141 (148)
.+.|..+++..++..+++|...... ++| |--|-.--||++.|..|||. +|+.- +-..+.+|...+.
T Consensus 148 ~~~~~~l~a~~~k~~~~~i~~~~~i-~~l~~g~st~~ne~~gdl~~ef~~-~~~~~--e~~~l~~l~~~~~ 214 (1887)
T 2uv8_A 148 SLLLHVLVAHKLKKSLDSIPMSKTI-KDLVGGKXTVQNEILGDLGKEFGT-TPEKP--EETPLEELAETFQ 214 (1887)
T ss_dssp HHHHHHHHHHTTTSCTTTCCTTSCH-HHHHTTCHHHHHHHHHHHHHHHCC-CCSCT--TTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCChhhCCccccH-HHHhCChhhhhhHHHHHHHHHhcc-CCCcc--ccCCHHHHHHHHH
Confidence 5667788999999999999999999 665 88899999999999999998 56532 2234444444443
No 72
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=26.86 E-value=65 Score=20.48 Aligned_cols=31 Identities=6% Similarity=0.261 Sum_probs=20.9
Q ss_pred HHHHHHHhCCc-cChhhhccCCCHHHHHHHHHHh
Q 032037 111 VMAFEEEFSVE-IPEEKADKLTCCADVARYIASE 143 (148)
Q Consensus 111 v~~LEeeFgIe-Ip~~dl~~~~TV~dlv~~I~~~ 143 (148)
+..+++.||++ +|.++ ...|++.++-....+
T Consensus 19 l~dl~~~l~~~~l~~~~--~~~Tl~G~i~~~lg~ 50 (86)
T 2p4p_A 19 LEDVMRALNIHTFPRDE--NYETIGGFMMYMLRX 50 (86)
T ss_dssp HHHHHHHTTCCCSCCSC--SSCBHHHHHHHHHCS
T ss_pred HHHHHHHhCCCCCCcCC--CCccHHHHHHHHhCC
Confidence 34678889996 98532 577888876544433
No 73
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=25.09 E-value=74 Score=18.71 Aligned_cols=23 Identities=13% Similarity=0.270 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCC
Q 032037 68 PDEIMHRVIALVKKFDKTDAHKV 90 (148)
Q Consensus 68 ~~eI~~~I~~il~~~l~vd~~~I 90 (148)
+.++.+.|.+.+.+.+|++++.+
T Consensus 15 K~~L~~~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 15 KREFVERLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHHHHHHHHhCcCcceE
Confidence 46788889999999999988765
No 74
>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1
Probab=25.04 E-value=39 Score=23.78 Aligned_cols=18 Identities=22% Similarity=0.399 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhCCccChh
Q 032037 108 VELVMAFEEEFSVEIPEE 125 (148)
Q Consensus 108 VELv~~LEeeFgIeIp~~ 125 (148)
-+-+..+|+++|+.+|.+
T Consensus 24 ~e~I~~~E~~Lgi~fP~d 41 (135)
T 2pag_A 24 EDQLVEIEEQLFINIPFV 41 (135)
T ss_dssp HHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHCCCCCHH
Confidence 577899999999999985
No 75
>2kxo_A Cell division topological specificity factor; MINE, MIND-binding, to specificity, cell cycle; NMR {Neisseria gonorrhoeae}
Probab=25.02 E-value=57 Score=21.94 Aligned_cols=27 Identities=4% Similarity=0.178 Sum_probs=22.4
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCCCC
Q 032037 65 SANPDEIMHRVIALVKKFDKTDAHKVT 91 (148)
Q Consensus 65 ~~t~~eI~~~I~~il~~~l~vd~~~It 91 (148)
+-.-+.+.+.|+++|+++..+++++++
T Consensus 37 pd~l~~lk~eIl~VIsKYv~Id~~~v~ 63 (95)
T 2kxo_A 37 PDYLPTLRKALMEVLSKYVNVSLDNIR 63 (95)
T ss_dssp CCSHHHHHHHHHHHHHHHSCCCTTSEE
T ss_pred HHHHHHHHHHHHHHHHHheecchhheE
Confidence 445589999999999999999887654
No 76
>3id6_A NOP5, PRE mRNA splicing protein; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus}
Probab=24.64 E-value=1e+02 Score=24.47 Aligned_cols=39 Identities=13% Similarity=0.258 Sum_probs=31.6
Q ss_pred CCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCH
Q 032037 94 ADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCC 133 (148)
Q Consensus 94 ~~l~~dLGlDSLd~VELv~~LEeeFgIeIp~~dl~~~~TV 133 (148)
.+| .++|+|+=....+..+-+.--|.+|++.|+..+...
T Consensus 198 ~~l-~~i~l~~~~~~~I~~aA~~SmG~~ise~DL~~I~~~ 236 (268)
T 3id6_A 198 DSL-KELGFNEQRINRILDAAKKSIGADISEDDLSAMRMI 236 (268)
T ss_dssp HHH-GGGTCCHHHHHHHHHHHHSCCCCCCCHHHHHHHHHH
T ss_pred ccH-hhcCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 346 667899988888889999999999999997665544
No 77
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=23.22 E-value=65 Score=18.42 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCC
Q 032037 68 PDEIMHRVIALVKKFDKTDAHKV 90 (148)
Q Consensus 68 ~~eI~~~I~~il~~~l~vd~~~I 90 (148)
+.++.+.|.+.+.+.+|++++.+
T Consensus 16 k~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 16 KRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHhCcCcCeE
Confidence 35778888999999999887654
No 78
>2zjq_5 50S ribosomal protein L7/L12; ribosome, ribosomal subunit, thiopeptide antibiotics, complex, translational regulation, molecular switch; 3.30A {Deinococcus radiodurans} SCOP: d.45.1.1
Probab=23.22 E-value=56 Score=23.16 Aligned_cols=22 Identities=18% Similarity=0.400 Sum_probs=17.9
Q ss_pred CCChhHHHHHHHHHHHHhCCcc
Q 032037 101 SLDSLDRVELVMAFEEEFSVEI 122 (148)
Q Consensus 101 GlDSLd~VELv~~LEeeFgIeI 122 (148)
++.=+...||+..||++||+.-
T Consensus 14 ~ltllE~~eLv~~lee~fgv~a 35 (122)
T 2zjq_5 14 QLTIMELADLIDGLKETWGVTA 35 (122)
T ss_pred cCCHHHHHHHHHHHHHHcCCCC
Confidence 3445778899999999999974
No 79
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=22.87 E-value=66 Score=18.39 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHhhhCCCCCCC
Q 032037 68 PDEIMHRVIALVKKFDKTDAHKV 90 (148)
Q Consensus 68 ~~eI~~~I~~il~~~l~vd~~~I 90 (148)
+.++.+.|.+.+.+.++++++.+
T Consensus 16 k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 16 KETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHhCcCcccE
Confidence 35778888999999999887653
No 80
>2j01_L 50S ribosomal protein L7; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_L 3i8i_I
Probab=22.80 E-value=58 Score=23.18 Aligned_cols=22 Identities=23% Similarity=0.339 Sum_probs=17.8
Q ss_pred CCChhHHHHHHHHHHHHhCCcc
Q 032037 101 SLDSLDRVELVMAFEEEFSVEI 122 (148)
Q Consensus 101 GlDSLd~VELv~~LEeeFgIeI 122 (148)
+|.=+...||+..||++||+.-
T Consensus 14 ~ltllE~~eLv~~lee~fgv~a 35 (125)
T 2j01_L 14 QATVLELKQLIDALKEAWGVTA 35 (125)
T ss_pred cCCHHHHHHHHHHHHHHcCCCc
Confidence 3445778899999999999974
No 81
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=21.90 E-value=47 Score=22.10 Aligned_cols=21 Identities=14% Similarity=0.109 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHhCCccChhhh
Q 032037 107 RVELVMAFEEEFSVEIPEEKA 127 (148)
Q Consensus 107 ~VELv~~LEeeFgIeIp~~dl 127 (148)
..|-+..|.+.+|+++|..+.
T Consensus 82 f~eA~~~La~~~gi~~~~~~~ 102 (103)
T 1d0q_A 82 FVEAAKRLAAKAGVDLSVYEL 102 (103)
T ss_dssp HHHHHHHHHHHHTCCCGGGCC
T ss_pred HHHHHHHHHHHhCCCCCccCC
Confidence 467777788889999887654
Done!