BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032040
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XJ35|CLPR1_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 1,
chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1
Length = 387
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/148 (68%), Positives = 121/148 (81%), Gaps = 2/148 (1%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
++YCKS VYT+NCGMA+GQAAMLLS+G KGYR +QP+SSTKLYLP V RSSG DMW K
Sbjct: 242 ISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAIDMWIK 301
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEK 120
AK+L+AN E YIELLAKGTGK KE+I +DI+RPKY+QA+ AI YG+ADKI DSQD+++EK
Sbjct: 302 AKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKIADSQDSSFEK 361
Query: 121 RDYDMMLAQQMSMEREAGGPQAAPSGFR 148
RDYD LAQ+ R GG AAP+G R
Sbjct: 362 RDYDGTLAQRAM--RPGGGSPAAPAGLR 387
>sp|Q7N0L3|CLPP_PHOLL ATP-dependent Clp protease proteolytic subunit OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=clpP PE=3
SV=1
Length = 207
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A LL+ GAKG R PNS ++ P+ G G TD+
Sbjct: 94 MQFIKPDVSTICMGQACSMGAFLLTAGAKGKRICLPNSRVMIHQPL-GGFQGQATDIEIH 152
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115
A+++ EL+AK TG+P EEIAKD +R +++ A EA+ YGL DKI +D
Sbjct: 153 AQEILKVKSRMNELMAKHTGRPIEEIAKDTERDRFLSADEAVEYGLVDKIFTHRD 207
>sp|Q8LB10|CLPR4_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 4,
chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1
Length = 305
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K ++T+ G A+G+AA+LL+ GAKG R P+S+ + P+ R G TD+
Sbjct: 175 MGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPI-ARFQGQATDVEIA 233
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
K+++ ++L +K GK E+I D++RPKY EA+ YG+ DK++
Sbjct: 234 RKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVV 284
>sp|Q9L4P4|CLPR_SYNE7 Putative ATP-dependent Clp protease proteolytic subunit-like
OS=Synechococcus elongatus (strain PCC 7942) GN=clpR
PE=3 SV=1
Length = 228
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V+T+ G A G AAM+LS G G R P+++ L P G + G +D+ +
Sbjct: 105 MRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPRTG-AQGQASDIQIR 163
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
AK++ AN + +E+ A+ TG+ + +A+D R YM +A+ YGL D+++DS+
Sbjct: 164 AKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLIDRVLDSR 217
>sp|P74466|CLPR_SYNY3 Putative ATP-dependent Clp protease proteolytic subunit-like
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=clpR
PE=3 SV=1
Length = 225
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
+ Y K V+T+ G A G AAM+LS G KGYR P+++ L G + G TD+ +
Sbjct: 103 LNYIKPPVHTICIGQAMGTAAMILSSGTKGYRASLPHATIVLNQNRTG-AQGQATDIQIR 161
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113
AK++ +N ++ +E+L+ TG+ +E++AKD+ R Y+ +A YGL D++++S
Sbjct: 162 AKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTFYLTPAQAKEYGLIDRVLES 214
>sp|B2KCS5|CLPP_ELUMP ATP-dependent Clp protease proteolytic subunit OS=Elusimicrobium
minutum (strain Pei191) GN=clpP PE=3 SV=1
Length = 195
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVV--GRSSGPVTDMW 58
M + K+ + T+ G A A+LL+ G+KG R P++ ++ P++ G SG VTD+
Sbjct: 79 MQFIKAPITTICMGQAMSFGAVLLAAGSKGKRYALPHARIMIHQPLIWGGGISGQVTDIE 138
Query: 59 RKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112
++ +L N E +++LA TG+ KE+I +D +R YM A+EA YGL D+++D
Sbjct: 139 IESNELRKNKEHLLDILAHHTGQDKEKIRQDSERNYYMSAQEAKAYGLIDEVLD 192
>sp|Q60107|CLPP_YEREN ATP-dependent Clp protease proteolytic subunit OS=Yersinia
enterocolitica GN=clpP PE=3 SV=1
Length = 207
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A LL+ GAKG R PNS ++ P+ G G TD+
Sbjct: 94 MQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIH 152
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115
AK++ EL+AK TGK EEI +D +R +++ A EA+ YGL D + +D
Sbjct: 153 AKEILKVKSRMNELMAKHTGKSLEEIERDTERDRFLSADEAVEYGLVDSVFTRRD 207
>sp|A1JNN2|CLPP_YERE8 ATP-dependent Clp protease proteolytic subunit OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=clpP PE=3 SV=1
Length = 207
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A LL+ GAKG R PNS ++ P+ G G TD+
Sbjct: 94 MQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIH 152
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115
AK++ EL+AK TGK EEI +D +R +++ A EA+ YGL D + +D
Sbjct: 153 AKEILKVKSRMNELMAKHTGKSLEEIERDTERDRFLSADEAVEYGLVDSVFTRRD 207
>sp|Q9K709|CLPP1_BACHD ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=clpP1 PE=3 SV=1
Length = 194
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ GMA A LL+ GAKG R PNS ++ P+ G + G +D+
Sbjct: 81 MQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPL-GGTRGQASDIEIH 139
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113
+ + E+ +LA+ TG+P E+IAKD R +M A++A YGL DK+I++
Sbjct: 140 TRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREYGLIDKVIET 192
>sp|O67357|CLPP_AQUAE ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus
(strain VF5) GN=clpP PE=3 SV=1
Length = 201
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ G A A+LL+ GA G R P+S ++ P+ G G TD+
Sbjct: 88 MQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIHQPL-GGIQGQATDIIIH 146
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115
A++++ E I++LAK TG+PK++IA DI+R +M EA YGL DK+I+ ++
Sbjct: 147 AEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYFMSPYEAKDYGLIDKVIEKRE 201
>sp|Q5FL55|CLPP_LACAC ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus
acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)
GN=clpP PE=3 SV=1
Length = 195
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + KS V T+ GMA A++LL+ G KG R PNS+ ++ P+ G + G TD+
Sbjct: 80 MNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQPL-GGAQGQQTDIQIA 138
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
A ++ + + E+L + TG+P E+I KD +R Y+ A+EA YGL D+I+
Sbjct: 139 ANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKEYGLIDEIM 189
>sp|A8F754|CLPP_THELT ATP-dependent Clp protease proteolytic subunit OS=Thermotoga
lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)
GN=clpP PE=3 SV=1
Length = 199
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y KS V T+ G A AA+LL+ G KG R PN+ L+ P+ G + GPV D+
Sbjct: 85 MQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPL-GGAEGPVKDVEII 143
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
K+L +L++ TG+P + I KD R +M A EA+ YGL DK+I+S+
Sbjct: 144 TKELLRIKNLINTILSEKTGQPLDRIEKDTDRDFFMSAYEALDYGLVDKVIESK 197
>sp|B4EU53|CLPP_PROMH ATP-dependent Clp protease proteolytic subunit OS=Proteus mirabilis
(strain HI4320) GN=clpP PE=3 SV=1
Length = 207
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K+ V T+ G A A LLS GAKG R PNS ++ P+ G G TD+
Sbjct: 94 MQYIKADVSTICMGQACSMGAFLLSAGAKGKRICLPNSRVMIHQPL-GGYQGQATDIQIH 152
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKI 110
A+++ EL+A+ TGK EEI +D +R +++ A EA+ YGL DK+
Sbjct: 153 AQEILKVKSRMNELMAQHTGKSIEEIERDTERDRFLSANEALEYGLVDKV 202
>sp|A8YUD9|CLPP_LACH4 ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus
helveticus (strain DPC 4571) GN=clpP PE=3 SV=1
Length = 194
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + KS V T+ GMA A++LL+ G KG R PNS+ ++ P+ G + G TD+
Sbjct: 80 MNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQPL-GGAQGQQTDIQIA 138
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
A ++ + + E+L + TG+P E+I KD +R Y+ A+EA YGL D+I+
Sbjct: 139 ANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKEYGLIDEIM 189
>sp|Q2RL31|CLPP_MOOTA ATP-dependent Clp protease proteolytic subunit OS=Moorella
thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1
Length = 199
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y + V T+ G+A A LL+ GAKG R PNS ++ P+ G + G D+
Sbjct: 82 MQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPM-GGTQGQAVDIEIH 140
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
AK + A ++ +L++ TGKP E+IA+D R +M A+EA YGL D++I
Sbjct: 141 AKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYGLIDEVI 191
>sp|Q8L770|CLPR3_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 3,
chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1
Length = 330
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 5 KSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSG--PVTDMWRKAK 62
K++V+TV G A GQA +LLS G KG R + P++ + P V SSG P +D+ +AK
Sbjct: 196 KNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAK 254
Query: 63 DLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
++ N + +ELL+K TG E +A ++RP YM A +A +G+ D+I+
Sbjct: 255 EVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRIL 303
>sp|B0SZQ2|CLPP_CAUSK ATP-dependent Clp protease proteolytic subunit OS=Caulobacter sp.
(strain K31) GN=clpP PE=3 SV=1
Length = 208
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y KS V TV GMA ++LL GA G+R PN+ ++ P G G +D+ R
Sbjct: 89 MQYIKSPVSTVCMGMAASMGSLLLQAGAPGHRIALPNARIMVHQPS-GGFRGQASDIERH 147
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEK 120
A+D+ E+ K TG+ EE+ K + R +M A+EA +GL D I +S+D A EK
Sbjct: 148 AEDIIKTKRRLNEIYVKHTGRTYEEVEKTLDRDHFMSAEEAKAWGLIDHINESRDEADEK 207
>sp|C4Z1T6|CLPP_EUBE2 ATP-dependent Clp protease proteolytic subunit OS=Eubacterium
eligens (strain ATCC 27750 / VPI C15-48) GN=clpP PE=3
SV=1
Length = 193
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ GMA A LLS GAKG R PN+ ++ P G + G T++
Sbjct: 81 MQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEIMIHQPS-GGARGQETEIRIV 139
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112
A+++ E+LA TGK EEI++D +R YM A+EA+ YGL D +++
Sbjct: 140 AENILKTRNKLNEILAANTGKSVEEISRDTERDNYMTAQEAVAYGLIDSVVE 191
>sp|Q8RHJ8|CLPP_FUSNN ATP-dependent Clp protease proteolytic subunit OS=Fusobacterium
nucleatum subsp. nucleatum (strain ATCC 25586 / CIP
101130 / JCM 8532 / LMG 13131) GN=clpP PE=3 SV=1
Length = 193
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVV-GRSSGPVTDMWR 59
M Y K V TV G A A LL+ GAKG R NS ++ P++ G G TD+
Sbjct: 80 MNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKGQATDISI 139
Query: 60 KAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
A +L + ELLAK TGK KE+I +D +R Y+ ++EA+ YGL D +
Sbjct: 140 HANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDSVF 191
>sp|Q74K84|CLPP_LACJO ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus
johnsonii (strain CNCM I-12250 / La1 / NCC 533) GN=clpP
PE=3 SV=1
Length = 195
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + KS V T+ GMA A++LL+ G KG R PNS+ ++ P+ G + G TD+
Sbjct: 80 MNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQPL-GGAQGQQTDIQIA 138
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
A ++ + + ++L + TG+P ++I KD +R Y+ A+EA YGL D+I+ +Q
Sbjct: 139 ANEILKSRKKLNQILHETTGQPLDKILKDTERDNYLSAEEAKDYGLIDEILVNQ 192
>sp|Q042E8|CLPP_LACGA ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus
gasseri (strain ATCC 33323 / DSM 20243) GN=clpP PE=3
SV=1
Length = 195
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + KS V T+ GMA A++LL+ G KG R PNS+ ++ P+ G + G TD+
Sbjct: 80 MNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQPL-GGAQGQQTDIQIA 138
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
A ++ + + ++L + TG+P ++I KD +R Y+ A+EA YGL D+I+ +Q
Sbjct: 139 ANEILKSRKKLNQILHETTGQPLDKILKDTERDNYLSAEEAKDYGLIDEILVNQ 192
>sp|Q21KA9|CLPP_SACD2 ATP-dependent Clp protease proteolytic subunit OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=clpP
PE=3 SV=1
Length = 212
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A LL+ GAKG R PN+ T ++ P G + G +D+ +
Sbjct: 96 MQFIKPDVSTMCIGQACSMGAFLLTAGAKGKRFCLPNARTMIHQPS-GGAQGQASDIHIQ 154
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112
A+++ E E++A TG+ EEIA+D +R ++M A E++ YGL DK+++
Sbjct: 155 AQEILKLRERLNEIMAGHTGRGVEEIARDTERDRFMSAHESVEYGLIDKVLE 206
>sp|Q0ST53|CLPP_CLOPS ATP-dependent Clp protease proteolytic subunit OS=Clostridium
perfringens (strain SM101 / Type A) GN=clpP PE=3 SV=1
Length = 194
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ GMA A LLS GAKG R PN+ ++ P+ G G TD+
Sbjct: 82 MQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIMIHQPL-GGFQGQATDIDIH 140
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112
AK + + ++L++ T +P E+I D++R +M+A EA+ YGL DK+I+
Sbjct: 141 AKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAVEYGLIDKVIE 192
>sp|Q8XKK1|CLPP_CLOPE ATP-dependent Clp protease proteolytic subunit OS=Clostridium
perfringens (strain 13 / Type A) GN=clpP PE=3 SV=1
Length = 194
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ GMA A LLS GAKG R PN+ ++ P+ G G TD+
Sbjct: 82 MQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIMIHQPL-GGFQGQATDIDIH 140
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112
AK + + ++L++ T +P E+I D++R +M+A EA+ YGL DK+I+
Sbjct: 141 AKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAVEYGLIDKVIE 192
>sp|Q0TQK2|CLPP_CLOP1 ATP-dependent Clp protease proteolytic subunit OS=Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
GN=clpP PE=3 SV=1
Length = 194
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ GMA A LLS GAKG R PN+ ++ P+ G G TD+
Sbjct: 82 MQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIMIHQPL-GGFQGQATDIDIH 140
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112
AK + + ++L++ T +P E+I D++R +M+A EA+ YGL DK+I+
Sbjct: 141 AKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAVEYGLIDKVIE 192
>sp|A0Q2L1|CLPP_CLONN ATP-dependent Clp protease proteolytic subunit OS=Clostridium novyi
(strain NT) GN=clpP PE=3 SV=1
Length = 195
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ GMA A LL+ GAKG R PNS ++ P+ G G TD+
Sbjct: 81 MQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPL-GGFQGQATDIGIH 139
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
A + + +L++ TG+P E I KD++R +M+A+EA YGL D +I S+
Sbjct: 140 ANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEAKEYGLIDDVITSR 193
>sp|Q3ATL3|CLPP_CHLCH ATP-dependent Clp protease proteolytic subunit OS=Chlorobium
chlorochromatii (strain CaD3) GN=clpP PE=3 SV=1
Length = 225
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y + ++ TV GMA A LL+ G KG R P+S ++ P G + G TD+ +
Sbjct: 106 MQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLPHSRIMIHQPS-GGAQGQETDIVIQ 164
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEK 120
A+++E ELLAK TG+P E++ +D +R ++M +EA+ YGL D I + + EK
Sbjct: 165 AREIEKIRRLLEELLAKHTGQPVEKVREDSERDRWMNPQEALEYGLIDAIFEKRPTP-EK 223
Query: 121 RD 122
+D
Sbjct: 224 KD 225
>sp|Q1AVS9|CLPP_RUBXD ATP-dependent Clp protease proteolytic subunit OS=Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129) GN=clpP PE=3
SV=1
Length = 200
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K + T GMA A LL+ G KG R PN+ L+ P VG +G +D+
Sbjct: 87 MQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRILLHQPAVGGLAGQASDVEIH 146
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
A++L E+L++ TG+P ++I +D R M A+EAI YGL D I+
Sbjct: 147 ARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEAIEYGLIDDIV 197
>sp|Q8D346|CLPP_WIGBR ATP-dependent Clp protease proteolytic subunit OS=Wigglesworthia
glossinidia brevipalpis GN=clpP PE=3 SV=1
Length = 194
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K +V T+ G + AA++L+ G KG R PN+ ++ P+ G S G TD+
Sbjct: 81 MQFIKCEVSTLCIGQSSSMAALILASGEKGKRFSLPNARIMIHQPL-GGSQGQATDIAIH 139
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
++ + IELL+K TG+ E I+KD +R ++ EA++YGL DK+I
Sbjct: 140 TTEILKIKKCMIELLSKHTGQSAEIISKDTERDRFFSGSEAVIYGLIDKVI 190
>sp|Q6D827|CLPP_ERWCT ATP-dependent Clp protease proteolytic subunit OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=clpP PE=3 SV=1
Length = 207
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A LL+ GAKG R PNS ++ P+ G G TD+
Sbjct: 94 MQFIKPDVSTICMGQACSMGAFLLTAGAKGKRICLPNSRVMIHQPL-GGFQGQATDIEIH 152
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
AK++ EL+AK TG+P E I +D +R +++ A EA+ YGL D + ++
Sbjct: 153 AKEILKVKAKMNELMAKHTGQPLEAIERDTERDRFLSASEAVEYGLVDSVFTNR 206
>sp|B2UX13|CLPP_CLOBA ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain Alaska E43 / Type E3) GN=clpP PE=3
SV=1
Length = 199
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ GMA A LLS GAKG R PN+ ++ P+ G G TD+
Sbjct: 81 MQYIKPDVSTICVGMAASMGAFLLSSGAKGKRYALPNAEIMIHQPL-GGFQGQATDIQIH 139
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
A + ES ++L++ T +P E I D++R +M A EA YGL DK+I
Sbjct: 140 ANRILKIKESLNKILSENTNQPLEVIEADVERDNFMTADEAKAYGLVDKVI 190
>sp|Q7VXI7|CLPP_BORPE ATP-dependent Clp protease proteolytic subunit OS=Bordetella
pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
GN=clpP PE=3 SV=1
Length = 217
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G+A A LL+ G KG R PNS ++ P G + G +D+ +
Sbjct: 102 MQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPS-GGAQGQASDIQIQ 160
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
A+++ E +LA+ TG+P E IA D +R +M A++A+ YGL DK++ S+
Sbjct: 161 AREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLTSR 214
>sp|Q7W8X2|CLPP_BORPA ATP-dependent Clp protease proteolytic subunit OS=Bordetella
parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
GN=clpP PE=3 SV=1
Length = 217
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G+A A LL+ G KG R PNS ++ P G + G +D+ +
Sbjct: 102 MQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPS-GGAQGQASDIQIQ 160
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
A+++ E +LA+ TG+P E IA D +R +M A++A+ YGL DK++ S+
Sbjct: 161 AREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLTSR 214
>sp|Q7WK83|CLPP_BORBR ATP-dependent Clp protease proteolytic subunit OS=Bordetella
bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
GN=clpP PE=3 SV=1
Length = 217
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G+A A LL+ G KG R PNS ++ P G + G +D+ +
Sbjct: 102 MQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPS-GGAQGQASDIQIQ 160
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
A+++ E +LA+ TG+P E IA D +R +M A++A+ YGL DK++ S+
Sbjct: 161 AREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLTSR 214
>sp|Q472D3|CLPP_CUPPJ ATP-dependent Clp protease proteolytic subunit OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=clpP PE=3
SV=1
Length = 216
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ GMA A LL+ GAKG R PNS ++ P+ G + G +D+ +
Sbjct: 103 MQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPL-GGARGQASDIEIQ 161
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
A+++ E +L++ TG+P E+IA+D R +M +A+ YGL DK+I
Sbjct: 162 AREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVI 212
>sp|B2TPB9|CLPP_CLOBB ATP-dependent Clp protease proteolytic subunit OS=Clostridium
botulinum (strain Eklund 17B / Type B) GN=clpP PE=3 SV=1
Length = 199
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ GMA A LLS GA G R PN+ ++ P+ G G TD+
Sbjct: 81 MQYIKPDVSTICVGMAASMGAFLLSSGANGKRYALPNAEIMIHQPL-GGFQGQATDIQIH 139
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEK 120
A + ES ++L++ T +P E I D++R +M A EA YGL DK+I + +K
Sbjct: 140 ANRILKIKESLNKILSENTNQPLEVIEADVERDNFMTADEAKTYGLVDKVITKNETGKDK 199
>sp|Q1LM62|CLPP_RALME ATP-dependent Clp protease proteolytic subunit OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=clpP PE=3 SV=1
Length = 216
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ GMA A LL+ GAKG R PNS ++ P+ G + G +D+ +
Sbjct: 103 MQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPL-GGARGQASDIEIQ 161
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
A+++ E +L++ TG+P E+IA+D R +M +A+ YGL DK+I
Sbjct: 162 AREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVI 212
>sp|Q1H1G0|CLPP_METFK ATP-dependent Clp protease proteolytic subunit OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=clpP
PE=3 SV=1
Length = 213
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A+LL+ GA+G R PNS ++ P+ G G +D+
Sbjct: 97 MQFVKPDVSTLCVGQAASMGALLLAAGAQGKRFCLPNSRVMIHQPL-GGFQGQASDIEIH 155
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ-DAA 117
AK++ E +LA TG+P E+IA D R +M A++++ YG+ DK+I S+ DAA
Sbjct: 156 AKEILFLREKLNHILASHTGQPVEKIALDTDRDNFMSAEQSVAYGIVDKVIASRADAA 213
>sp|A9IR54|CLPP_BORPD ATP-dependent Clp protease proteolytic subunit OS=Bordetella petrii
(strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=clpP
PE=3 SV=1
Length = 217
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G+A A LL+ G KG R PNS ++ P G + G +D+ +
Sbjct: 102 MQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPS-GGAQGQASDIQIQ 160
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
A+++ E +LA+ TG+P E IA D +R +M A++A+ YGL DK++ S+
Sbjct: 161 AREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLASR 214
>sp|A1W5B6|CLPP_ACISJ ATP-dependent Clp protease proteolytic subunit OS=Acidovorax sp.
(strain JS42) GN=clpP PE=3 SV=1
Length = 202
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ CG A A LL+ GAKG R PNS ++ V+G + G TD+
Sbjct: 89 MQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSLPNSKIMIH-QVLGGARGQATDIEIH 147
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111
A+D+ E +LA+ TG+P E++ D +R +M A EA YG+ D++I
Sbjct: 148 ARDILRTKEQMNRILAERTGQPIEKVKADTERDYFMTADEAKDYGIVDQVI 198
>sp|Q5WDK0|CLPP2_BACSK ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus
clausii (strain KSM-K16) GN=clpP2 PE=3 SV=1
Length = 195
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ GMA A LL+ GAKG R PNS ++ P+ G G DM
Sbjct: 81 MQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMALPNSEVMIHQPL-GGMQGQAADMEIH 139
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113
A+ + E +++A+ +G+P E IA+D R +M A++A YGL DK+I++
Sbjct: 140 ARRIIQMREKLNQIMAERSGQPYERIARDTDRDNFMTAEQAKEYGLIDKVIET 192
>sp|Q2JWJ1|CLPP1_SYNJA ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus
sp. (strain JA-3-3Ab) GN=clpP1 PE=3 SV=1
Length = 203
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K + TV G A A LL+ G KG R P+S L+ P +G G +D+ +
Sbjct: 84 MNHVKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSLGMIQGQASDIEIR 143
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAA 117
A++ ELLA+ TG+P E+I +D++R Y+ A EA YG+ D++I + A
Sbjct: 144 ARETLRVKRRMNELLAQMTGQPLEKIERDVERDFYLSATEAQAYGIVDRVIQERSEA 200
>sp|Q7NEW1|CLPP2_GLOVI ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter
violaceus (strain PCC 7421) GN=clpP2 PE=3 SV=1
Length = 218
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + + + T+ G+A G +A+L++ G KG R PNS LY P G + G TD+ +
Sbjct: 92 MRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPY-GGARGQATDINIR 150
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112
A++L + +LL+ TGK E+I KD +R YM +EA+ YGL DK+++
Sbjct: 151 AQELLTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQEAVSYGLIDKVLE 202
>sp|Q2JHM1|CLPP1_SYNJB ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus
sp. (strain JA-2-3B'a(2-13)) GN=clpP1 PE=3 SV=1
Length = 203
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K + TV G A A LL+ G KG R P+S L+ P +G G +D+ +
Sbjct: 84 MNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSLGTIQGQASDIEIR 143
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAA 117
A++ E+LA+ TG+P E+I +D++R Y+ A EA YG+ D++I + A
Sbjct: 144 ARETLRVKRRMNEILAQTTGQPLEKIERDVERDFYLSATEAQAYGIVDRVIQERSEA 200
>sp|Q8ENM5|CLPP_OCEIH ATP-dependent Clp protease proteolytic subunit OS=Oceanobacillus
iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /
HTE831) GN=clpP PE=3 SV=1
Length = 193
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ GMA A LL+ G KG R PNS ++ P+ G + G TD+
Sbjct: 81 MNFIKPNVSTICIGMAASMGAFLLTAGEKGKRFALPNSEIMIHQPL-GGTQGQATDIEIH 139
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112
AK + E++A+ TG+P E I +D +R +M A +++ YGL DKI++
Sbjct: 140 AKRIIDIKRRMNEIMAEKTGQPIEVIERDTERDNFMTADQSVEYGLIDKILE 191
>sp|C4ZGF4|CLPP_EUBR3 ATP-dependent Clp protease proteolytic subunit OS=Eubacterium
rectale (strain ATCC 33656 / VPI 0990) GN=clpP PE=3 SV=1
Length = 193
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M Y K V T+ G+A A LL+ GAKG R PN+ ++ P G + G T++
Sbjct: 81 MQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEIMIHQPS-GGAKGQATEIQIA 139
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114
A+++ + E+LA TGKP E IA D +R YM A+EA YGL D +I ++
Sbjct: 140 AENILKTKKRLNEILAANTGKPYETIAADTERDNYMSAQEAAEYGLIDSVITNR 193
>sp|Q66DT4|CLPP_YERPS ATP-dependent Clp protease proteolytic subunit OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=clpP
PE=3 SV=1
Length = 207
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A LL+ GAKG R PNS ++ P+ G G TD+
Sbjct: 94 MQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIH 152
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115
AK++ EL+A TGK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 153 AKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>sp|A4TPE3|CLPP_YERPP ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis
(strain Pestoides F) GN=clpP PE=3 SV=1
Length = 207
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A LL+ GAKG R PNS ++ P+ G G TD+
Sbjct: 94 MQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIH 152
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115
AK++ EL+A TGK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 153 AKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>sp|Q1CL65|CLPP_YERPN ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=clpP PE=3 SV=1
Length = 207
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A LL+ GAKG R PNS ++ P+ G G TD+
Sbjct: 94 MQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIH 152
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115
AK++ EL+A TGK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 153 AKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>sp|Q8ZC65|CLPP_YERPE ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis
GN=clpP PE=3 SV=1
Length = 207
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK 60
M + K V T+ G A A LL+ GAKG R PNS ++ P+ G G TD+
Sbjct: 94 MQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIH 152
Query: 61 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115
AK++ EL+A TGK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 153 AKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,855,639
Number of Sequences: 539616
Number of extensions: 2061873
Number of successful extensions: 6237
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4972
Number of HSP's gapped (non-prelim): 765
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)