Query 032040
Match_columns 148
No_of_seqs 118 out of 1093
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 14:04:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032040.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032040hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gm2_A ATP-dependent CLP prote 100.0 1.3E-39 4.3E-44 257.4 9.3 112 1-113 92-204 (205)
2 3qwd_A ATP-dependent CLP prote 100.0 9.5E-35 3.3E-39 228.9 9.1 119 1-120 81-199 (203)
3 3p2l_A ATP-dependent CLP prote 100.0 1.4E-34 4.9E-39 227.6 8.4 116 1-117 84-199 (201)
4 1tg6_A Putative ATP-dependent 100.0 1.7E-31 5.7E-36 219.1 11.4 117 1-118 136-252 (277)
5 2f6i_A ATP-dependent CLP prote 100.0 1.8E-31 6.3E-36 211.5 8.9 124 1-125 92-215 (215)
6 1yg6_A ATP-dependent CLP prote 100.0 3.2E-30 1.1E-34 200.6 8.6 113 1-114 80-192 (193)
7 2cby_A ATP-dependent CLP prote 100.0 4.9E-29 1.7E-33 196.2 8.8 117 1-118 81-197 (208)
8 1y7o_A ATP-dependent CLP prote 99.9 2.2E-28 7.6E-33 193.9 8.8 114 1-115 99-214 (218)
9 3viv_A 441AA long hypothetical 99.8 1.8E-20 6.2E-25 149.9 5.7 112 1-117 63-178 (230)
10 3bf0_A Protease 4; bacterial, 99.4 1.3E-12 4.4E-17 116.1 10.0 105 6-113 121-263 (593)
11 3rst_A Signal peptide peptidas 99.2 2.1E-10 7.1E-15 91.3 11.0 106 4-112 78-212 (240)
12 3bf0_A Protease 4; bacterial, 99.0 2.5E-09 8.5E-14 95.0 10.0 107 4-113 370-504 (593)
13 2pbp_A Enoyl-COA hydratase sub 97.7 8E-05 2.7E-09 59.2 7.4 90 3-114 93-184 (258)
14 1mj3_A Enoyl-COA hydratase, mi 97.7 0.00014 4.8E-09 57.9 8.0 90 3-114 95-186 (260)
15 2ej5_A Enoyl-COA hydratase sub 97.7 0.00011 3.7E-09 58.4 7.3 90 3-114 92-183 (257)
16 1dci_A Dienoyl-COA isomerase; 97.7 6.8E-05 2.3E-09 60.0 6.0 90 3-113 105-196 (275)
17 1sg4_A 3,2-trans-enoyl-COA iso 97.7 0.00011 3.8E-09 58.4 7.2 92 3-114 95-188 (260)
18 3hrx_A Probable enoyl-COA hydr 97.6 0.00013 4.4E-09 57.8 7.3 91 3-115 89-181 (254)
19 3swx_A Probable enoyl-COA hydr 97.6 0.00033 1.1E-08 55.8 9.7 92 2-115 99-192 (265)
20 3lao_A Enoyl-COA hydratase/iso 97.6 0.00032 1.1E-08 55.7 9.5 92 2-115 102-195 (258)
21 2a7k_A CARB; crotonase, antibi 97.6 8.9E-05 3.1E-09 58.5 6.1 90 3-113 92-181 (250)
22 1uiy_A Enoyl-COA hydratase; ly 97.6 7.5E-05 2.6E-09 59.1 5.6 91 3-114 92-182 (253)
23 4f47_A Enoyl-COA hydratase ECH 97.6 0.00034 1.2E-08 56.1 9.4 91 3-115 113-205 (278)
24 2ppy_A Enoyl-COA hydratase; be 97.6 0.00015 5.2E-09 57.7 7.3 90 3-114 99-191 (265)
25 3pea_A Enoyl-COA hydratase/iso 97.6 0.0001 3.4E-09 58.8 6.3 90 3-114 96-187 (261)
26 3isa_A Putative enoyl-COA hydr 97.6 0.00017 5.9E-09 57.2 7.5 89 3-114 96-184 (254)
27 3kqf_A Enoyl-COA hydratase/iso 97.6 0.00011 3.6E-09 58.8 6.2 90 3-114 100-191 (265)
28 3pe8_A Enoyl-COA hydratase; em 97.6 0.00011 3.7E-09 58.6 6.3 91 2-114 89-181 (256)
29 3g64_A Putative enoyl-COA hydr 97.6 9.5E-05 3.2E-09 59.4 5.9 90 3-114 111-203 (279)
30 2vx2_A Enoyl-COA hydratase dom 97.6 0.0001 3.6E-09 59.7 6.2 91 3-114 124-214 (287)
31 1hzd_A AUH, AU-binding protein 97.6 0.0001 3.4E-09 59.2 6.0 90 3-114 103-194 (272)
32 3gow_A PAAG, probable enoyl-CO 97.6 0.0002 6.8E-09 56.8 7.5 90 3-114 89-180 (254)
33 3r6h_A Enoyl-COA hydratase, EC 97.6 0.00027 9.2E-09 55.4 8.0 92 3-114 93-184 (233)
34 2gtr_A CDY-like, chromodomain 97.5 0.00019 6.6E-09 57.0 7.2 90 3-114 99-190 (261)
35 3h81_A Enoyl-COA hydratase ECH 97.5 0.00017 5.9E-09 58.2 6.9 91 3-115 113-205 (278)
36 3qmj_A Enoyl-COA hydratase, EC 97.5 0.00022 7.6E-09 56.5 7.4 90 3-114 97-188 (256)
37 3rsi_A Putative enoyl-COA hydr 97.5 0.00032 1.1E-08 55.9 8.3 90 3-114 100-191 (265)
38 3p5m_A Enoyl-COA hydratase/iso 97.5 0.00015 5.2E-09 57.6 6.3 90 3-114 90-181 (255)
39 3tlf_A Enoyl-COA hydratase/iso 97.5 0.00015 5.2E-09 58.0 6.3 92 2-114 107-200 (274)
40 3njd_A Enoyl-COA hydratase; ss 97.5 0.00016 5.5E-09 59.7 6.5 89 3-114 155-243 (333)
41 2f9i_A Acetyl-coenzyme A carbo 97.5 0.00022 7.4E-09 59.3 7.2 81 3-113 196-276 (327)
42 3sll_A Probable enoyl-COA hydr 97.5 0.0003 1E-08 57.0 7.9 91 3-115 121-214 (290)
43 3trr_A Probable enoyl-COA hydr 97.5 0.00035 1.2E-08 55.6 8.1 91 3-115 91-183 (256)
44 2uzf_A Naphthoate synthase; ly 97.5 0.00025 8.4E-09 56.9 7.3 90 3-114 105-196 (273)
45 2j5i_A P-hydroxycinnamoyl COA 97.5 0.0002 6.9E-09 57.5 6.7 90 2-113 103-194 (276)
46 2f9y_A Acetyl-COA carboxylase, 97.5 0.00019 6.5E-09 60.0 6.7 81 3-113 210-290 (339)
47 4fzw_C 1,2-epoxyphenylacetyl-C 97.5 0.00031 1.1E-08 56.4 7.6 91 3-115 109-201 (274)
48 3qxz_A Enoyl-COA hydratase/iso 97.5 0.00031 1E-08 56.1 7.5 91 2-114 95-187 (265)
49 3moy_A Probable enoyl-COA hydr 97.5 0.00024 8.1E-09 56.8 6.8 91 3-115 98-190 (263)
50 3ot6_A Enoyl-COA hydratase/iso 97.5 0.00043 1.5E-08 54.2 8.1 92 3-114 92-184 (232)
51 2f6q_A Peroxisomal 3,2-trans-e 97.5 0.00038 1.3E-08 56.0 8.0 90 3-114 119-210 (280)
52 3hin_A Putative 3-hydroxybutyr 97.5 0.00021 7.3E-09 57.5 6.4 90 3-114 104-195 (275)
53 3qxi_A Enoyl-COA hydratase ECH 97.4 0.00048 1.7E-08 55.0 8.2 89 5-115 102-192 (265)
54 3myb_A Enoyl-COA hydratase; ss 97.4 0.00025 8.6E-09 57.4 6.5 91 3-114 117-207 (286)
55 3t8b_A 1,4-dihydroxy-2-naphtho 97.4 0.00043 1.5E-08 57.5 7.8 91 3-115 165-258 (334)
56 3qk8_A Enoyl-COA hydratase ECH 97.4 0.00019 6.4E-09 57.6 5.2 90 3-114 105-196 (272)
57 3r9t_A ECHA1_1; ssgcid, seattl 97.4 0.00051 1.8E-08 54.9 7.8 91 3-115 99-191 (267)
58 2fbm_A Y chromosome chromodoma 97.4 0.00021 7.1E-09 58.1 5.5 90 3-114 117-208 (291)
59 3qre_A Enoyl-COA hydratase, EC 97.4 0.00026 9E-09 57.6 6.1 92 2-115 127-220 (298)
60 3r9q_A Enoyl-COA hydratase/iso 97.4 0.00041 1.4E-08 55.4 7.0 91 3-115 99-191 (262)
61 1wz8_A Enoyl-COA hydratase; ly 97.4 0.00018 6.1E-09 57.4 4.9 90 3-114 102-193 (264)
62 4fzw_A 2,3-dehydroadipyl-COA h 97.4 0.00035 1.2E-08 55.6 6.6 91 3-115 93-185 (258)
63 2q35_A CURF; crotonase, lyase; 97.4 0.00016 5.3E-09 57.1 4.4 89 3-113 88-178 (243)
64 3lke_A Enoyl-COA hydratase; ny 97.4 0.00011 3.8E-09 58.6 3.6 88 3-112 99-188 (263)
65 3fdu_A Putative enoyl-COA hydr 97.3 0.00056 1.9E-08 54.6 7.5 88 3-112 97-186 (266)
66 3l3s_A Enoyl-COA hydratase/iso 97.3 0.00033 1.1E-08 55.9 6.1 91 3-114 102-192 (263)
67 4di1_A Enoyl-COA hydratase ECH 97.3 0.00039 1.3E-08 56.1 6.5 90 3-114 113-204 (277)
68 3t89_A 1,4-dihydroxy-2-naphtho 97.3 0.00034 1.2E-08 56.7 5.8 89 3-114 121-212 (289)
69 3i47_A Enoyl COA hydratase/iso 97.3 0.00063 2.2E-08 54.5 7.3 91 3-114 97-187 (268)
70 1nzy_A Dehalogenase, 4-chlorob 97.3 0.00027 9.2E-09 56.4 5.1 90 3-114 98-189 (269)
71 1ef8_A Methylmalonyl COA decar 97.2 0.00022 7.5E-09 56.7 3.9 91 3-113 94-184 (261)
72 1pjh_A Enoyl-COA isomerase; EC 97.2 0.00041 1.4E-08 55.7 5.6 90 3-114 110-202 (280)
73 4eml_A Naphthoate synthase; 1, 97.2 0.00031 1E-08 56.5 4.7 89 3-114 107-198 (275)
74 1szo_A 6-oxocamphor hydrolase; 97.2 0.00042 1.4E-08 55.2 5.4 88 3-113 106-196 (257)
75 3gkb_A Putative enoyl-COA hydr 97.2 0.0005 1.7E-08 55.7 5.8 90 3-114 104-196 (287)
76 3oc7_A Enoyl-COA hydratase; se 97.2 0.00066 2.2E-08 54.1 6.4 86 3-110 106-192 (267)
77 3m6n_A RPFF protein; enoyl-COA 97.2 0.00086 3E-08 54.7 7.1 90 4-115 139-230 (305)
78 3he2_A Enoyl-COA hydratase ECH 97.1 0.00045 1.5E-08 55.4 4.6 90 3-112 105-194 (264)
79 3h0u_A Putative enoyl-COA hydr 97.0 0.00049 1.7E-08 55.8 4.4 90 3-114 101-193 (289)
80 3t3w_A Enoyl-COA hydratase; ss 97.0 0.00038 1.3E-08 56.0 3.6 88 3-114 115-204 (279)
81 3hp0_A Putative polyketide bio 97.0 0.00049 1.7E-08 55.1 4.1 90 3-113 98-187 (267)
82 3rrv_A Enoyl-COA hydratase/iso 96.9 0.0011 3.7E-08 53.4 5.3 87 3-111 120-208 (276)
83 3bpt_A 3-hydroxyisobutyryl-COA 96.9 0.00095 3.2E-08 55.7 5.1 89 3-114 100-190 (363)
84 2j5g_A ALR4455 protein; enzyme 96.7 0.00094 3.2E-08 53.4 3.6 89 3-114 115-206 (263)
85 4hdt_A 3-hydroxyisobutyryl-COA 96.7 0.0024 8.2E-08 53.2 6.2 89 3-114 103-193 (353)
86 1wdk_A Fatty oxidation complex 96.6 0.0042 1.4E-07 56.1 7.1 90 3-114 101-192 (715)
87 2np9_A DPGC; protein inhibitor 96.6 0.005 1.7E-07 53.0 7.2 90 3-113 282-371 (440)
88 3ju1_A Enoyl-COA hydratase/iso 96.5 0.0018 6E-08 55.1 4.2 89 3-114 140-230 (407)
89 2wtb_A MFP2, fatty acid multif 96.5 0.0069 2.4E-07 54.8 7.7 91 2-114 99-191 (725)
90 2w3p_A Benzoyl-COA-dihydrodiol 96.3 0.008 2.7E-07 53.2 7.1 89 3-113 127-222 (556)
91 3zwc_A Peroxisomal bifunctiona 95.9 0.013 4.4E-07 53.4 6.3 90 3-114 104-195 (742)
92 2f9y_B Acetyl-coenzyme A carbo 94.3 0.049 1.7E-06 44.5 4.9 73 5-114 191-264 (304)
93 2bzr_A Propionyl-COA carboxyla 94.0 0.037 1.3E-06 48.9 3.8 43 4-46 419-463 (548)
94 1vrg_A Propionyl-COA carboxyla 93.2 0.12 4.2E-06 45.3 5.6 90 4-113 402-496 (527)
95 1on3_A Methylmalonyl-COA carbo 92.8 0.096 3.3E-06 45.9 4.4 90 4-113 398-492 (523)
96 1pix_A Glutaconyl-COA decarbox 91.8 0.24 8.2E-06 44.0 5.7 93 4-114 443-546 (587)
97 3iav_A Propionyl-COA carboxyla 87.8 0.073 2.5E-06 46.8 -0.9 89 4-116 404-502 (530)
98 3n6r_B Propionyl-COA carboxyla 86.7 0.41 1.4E-05 42.1 3.2 90 4-116 410-503 (531)
99 3u9r_B MCC beta, methylcrotony 83.5 1.9 6.5E-05 38.1 6.0 94 4-116 424-529 (555)
100 3gf3_A Glutaconyl-COA decarbox 83.3 0.87 3E-05 40.5 3.8 98 4-115 445-549 (588)
101 1x0u_A Hypothetical methylmalo 78.3 0.39 1.3E-05 42.0 -0.3 41 4-46 397-441 (522)
102 2x24_A Acetyl-COA carboxylase; 64.8 2.4 8.1E-05 39.0 1.6 24 93-116 634-657 (793)
103 2f9i_B Acetyl-coenzyme A carbo 52.0 11 0.00037 30.3 3.3 73 5-114 194-267 (285)
104 2i6e_A Hypothetical protein; N 47.1 32 0.0011 27.1 5.3 36 60-95 226-261 (301)
105 3ksx_A Nitrate transport prote 44.2 73 0.0025 24.3 7.0 46 67-112 245-305 (324)
106 2nxo_A Hypothetical protein SC 39.5 26 0.00088 26.9 3.6 24 69-92 223-246 (291)
107 2k9q_A Uncharacterized protein 35.1 62 0.0021 19.4 4.3 31 72-102 18-48 (77)
108 3b7h_A Prophage LP1 protein 11 34.7 69 0.0023 18.9 4.5 32 72-103 23-55 (78)
109 3v7d_A Suppressor of kinetocho 33.5 1.1E+02 0.0036 22.2 6.0 23 80-102 135-157 (169)
110 1adr_A P22 C2 repressor; trans 33.3 74 0.0025 18.6 4.6 32 72-103 21-52 (76)
111 1y7y_A C.AHDI; helix-turn-heli 32.6 75 0.0026 18.4 4.7 43 60-102 14-59 (74)
112 2r1j_L Repressor protein C2; p 31.7 73 0.0025 18.0 4.6 31 72-102 21-51 (68)
113 3f6w_A XRE-family like protein 31.0 89 0.003 18.8 4.9 32 72-103 30-61 (83)
114 2wiu_B HTH-type transcriptiona 30.7 67 0.0023 19.5 4.0 48 55-102 11-58 (88)
115 3kz3_A Repressor protein CI; f 29.7 94 0.0032 18.7 5.2 32 72-103 28-59 (80)
116 2b5a_A C.BCLI; helix-turn-heli 29.1 90 0.0031 18.2 4.5 32 72-103 26-57 (77)
117 3s8q_A R-M controller protein; 28.8 97 0.0033 18.6 4.5 33 71-103 26-58 (82)
118 3mn2_A Probable ARAC family tr 28.5 1E+02 0.0035 19.7 4.8 52 57-108 21-83 (108)
119 2ast_A S-phase kinase-associat 27.1 1.3E+02 0.0044 21.2 5.5 48 53-100 98-148 (159)
120 2ict_A Antitoxin HIGA; helix-t 25.6 1E+02 0.0035 19.1 4.2 32 72-103 24-55 (94)
121 2p1m_A SKP1-like protein 1A; F 25.2 1.3E+02 0.0044 21.4 5.1 46 55-100 99-147 (160)
122 2ewt_A BLDD, putative DNA-bind 25.0 1.1E+02 0.0036 17.6 4.2 31 72-102 24-56 (71)
123 3g5g_A Regulatory protein; tra 24.5 1.2E+02 0.0041 19.5 4.5 44 60-103 29-75 (99)
124 2o4d_A Hypothetical protein PA 23.8 30 0.001 24.8 1.4 51 76-126 79-131 (165)
125 3omt_A Uncharacterized protein 23.7 1.2E+02 0.004 17.8 4.1 32 72-103 24-55 (73)
126 2x26_A Periplasmic aliphatic s 23.5 2.1E+02 0.0071 21.2 6.3 26 69-94 221-246 (308)
127 1lmb_3 Protein (lambda repress 22.6 1.4E+02 0.0047 18.2 5.1 31 72-102 33-63 (92)
128 2gmy_A Hypothetical protein AT 20.8 34 0.0012 24.0 1.2 52 76-127 59-112 (153)
129 2xi8_A Putative transcription 20.7 1.1E+02 0.0037 17.1 3.3 31 72-102 17-47 (66)
No 1
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=100.00 E-value=1.3e-39 Score=257.38 Aligned_cols=112 Identities=34% Similarity=0.454 Sum_probs=108.9
Q ss_pred CccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS-SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 1 m~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~-~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
|+++++||+|+|+|+|+|||++||++|++++|+++|||++|||||+ ++. +|++.|+++++++|+++++.+.++|+++|
T Consensus 92 m~~~~~~V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~-~~~~~G~a~di~i~a~el~~~~~~i~~iya~~T 170 (205)
T 4gm2_A 92 INYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSY-SIIPFNQATNIEIQNKEIMNTKKKVIEIISKNT 170 (205)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCC-CCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCc-ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6789999999999999999999999999999999999999999999 667 99999999999999999999999999999
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
|++.++|.++|+||+||||+||++|||||+|+++
T Consensus 171 G~~~e~I~~~m~rd~~msa~EA~eyGlID~V~~~ 204 (205)
T 4gm2_A 171 EKDTNVISNVLERDKYFNADEAVDFKLIDHILEK 204 (205)
T ss_dssp TCCHHHHHHHTTSCEEEEHHHHHHTTSCSEECCC
T ss_pred CCCHHHHHHHhcCCcccCHHHHHHcCCccEeecC
Confidence 9999999999999999999999999999999875
No 2
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=100.00 E-value=9.5e-35 Score=228.92 Aligned_cols=119 Identities=30% Similarity=0.439 Sum_probs=110.1
Q ss_pred CccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 1 m~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
|+++++||+|+|.|+|+|+|++|+++|++++|++.|||++|||||+ ++..|++.|+++++++++++++.+.++|+++||
T Consensus 81 i~~~~~~V~t~~~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~-~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG 159 (203)
T 3qwd_A 81 IQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPL-GGAQGQATEIEIAANHILKTREKLNRILSERTG 159 (203)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCCS-SSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHC
T ss_pred HHHhcCCcEEEEeeeehhHHHHHHHcCCcCeEEEcCCceEEEeccc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999999999999999 678999999999999999999999999999999
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCchhhhch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEK 120 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~~~~~~ 120 (148)
++.++|.++|++|+||||+||++|||||+|+.+..+..-|
T Consensus 160 ~~~e~i~~~~~~d~~lta~EA~e~GliD~I~~~~~~~~~~ 199 (203)
T 3qwd_A 160 QSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETKWSHP 199 (203)
T ss_dssp CCHHHHHHHHTSCCCEEHHHHHHHTSCSEECCCCC-----
T ss_pred CCHHHHHHHhhcCceecHHHHHHcCCcCEecCCccccccc
Confidence 9999999999999999999999999999999987654443
No 3
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=100.00 E-value=1.4e-34 Score=227.61 Aligned_cols=116 Identities=35% Similarity=0.504 Sum_probs=110.5
Q ss_pred CccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 1 m~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
|++++.||+|+|.|+|+|+|++|+++|++++|++.|||++|||||+ ++..|++.|+++++++++++++.+.++|+++||
T Consensus 84 i~~~~~~v~t~~~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~-~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG 162 (201)
T 3p2l_A 84 MQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPL-GGFRGQASDIEIHAKNILRIKDRLNKVLAHHTG 162 (201)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHHTSSTTCEEECTTCEEEECCCE-EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCeEEEEcCEehhHHHHHHHcCccCCEEEcCCCeEEEeccc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999999999999999 678999999999999999999999999999999
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCchhh
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAA 117 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~~~ 117 (148)
++.++|.++|++++||||+||++|||||+|+++..+.
T Consensus 163 ~~~e~i~~~~~~~~~lta~EA~e~GliD~I~~~~~~l 199 (201)
T 3p2l_A 163 QDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREAI 199 (201)
T ss_dssp CCHHHHHHHTSSCEEEEHHHHHHHTSCSEECCCSCC-
T ss_pred cCHHHHHHHhhcCeeecHHHHHHcCCccEecCCHHHh
Confidence 9999999999999999999999999999999987654
No 4
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=99.97 E-value=1.7e-31 Score=219.14 Aligned_cols=117 Identities=26% Similarity=0.388 Sum_probs=110.0
Q ss_pred CccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 1 m~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
|+++++||+|+|.|+|+|+|++|+++|++++|++.|||++|||||+ ++..|++.|+.+.+++++++++.+.++|+++||
T Consensus 136 I~~~k~pV~t~v~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~-~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG 214 (277)
T 1tg6_A 136 MQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPS-GGARGQATDIAIQAEEIMKLKKQLYNIYAKHTK 214 (277)
T ss_dssp HHHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCEEEEEccEeHHHHHHHHHCCCcCCEEEecCCEEEEeccc-ccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5678999999999999999999999999999999999999999998 678999999999999999999999999999999
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCchhhh
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAY 118 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~~~~ 118 (148)
++.++|.+++++++|||++||++|||||+|++...+..
T Consensus 215 ~~~e~i~~~~drd~~lta~EAle~GLID~I~~~~~~~~ 252 (277)
T 1tg6_A 215 QSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDG 252 (277)
T ss_dssp CCHHHHHHHHSSCEEECHHHHHHHTSCSEECSSCC---
T ss_pred CCHHHHHHHHhcCcccCHHHHHHCCCCCEecCcchhhc
Confidence 99999999999999999999999999999998876544
No 5
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=99.97 E-value=1.8e-31 Score=211.54 Aligned_cols=124 Identities=27% Similarity=0.375 Sum_probs=106.2
Q ss_pred CccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 1 m~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
|+.++.||+|+|.|+|+|+|++|+++|++++|+|.|||++|+|+|+ ++..|++.|+...++++.++++.+.++|+++||
T Consensus 92 i~~~~~pV~t~v~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~-~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g 170 (215)
T 2f6i_A 92 FNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPL-GNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTN 170 (215)
T ss_dssp HHHSSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTT-CSCC--------CHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCEEEEEeeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccc-cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999999999999999999999998 667899999999999999999999999999999
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCchhhhchhhHHH
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEKRDYDM 125 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~~~~~~~~~~~ 125 (148)
++.++|.+++++++|||++||++|||||+|+++..+....-+|++
T Consensus 171 ~~~e~i~~~~~~~~~lta~eA~e~GLiD~I~~~~~~~~~~~~~~~ 215 (215)
T 2f6i_A 171 QTVETIEKDSDRDYYMNALEAKQYGIIDEVIETKLPHPYFNKVEK 215 (215)
T ss_dssp CCHHHHHHHHHTTCEECHHHHHHHTSCSEECCCSSCCTTCC----
T ss_pred cCHHHHHHHHhCCeecCHHHHHHCCCCCEecCCcccchhhhhccC
Confidence 999999999999999999999999999999999887777776764
No 6
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=99.96 E-value=3.2e-30 Score=200.64 Aligned_cols=113 Identities=35% Similarity=0.518 Sum_probs=107.3
Q ss_pred CccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 1 m~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
|+.++.||+|+|.|+|+|+|++|+++|++++|++.|||++|+|+|+ ++..|++.|++...+++++.++.+.++|+++||
T Consensus 80 i~~~~~pV~~~v~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~-~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g 158 (193)
T 1yg6_A 80 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL-GGYQGQATDIEIHAREILKVKGRMNELMALHTG 158 (193)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCE-EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCEEEEEeeeHHHHHHHHHHCCCcCcEEEecCcEEEEEecc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999999888999999999999998 667899999999999999999999999999999
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
++.+++++++++++|||++||++|||||+|+++.
T Consensus 159 ~~~~~i~~~~~~~~~~ta~eA~~~GliD~i~~~~ 192 (193)
T 1yg6_A 159 QSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 192 (193)
T ss_dssp CCHHHHHHHTSSCEEEEHHHHHHHTSSSEECCCC
T ss_pred CCHHHHHHHhcCCeEEcHHHHHHcCCCCEecCCC
Confidence 9999999999999999999999999999998764
No 7
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=99.95 E-value=4.9e-29 Score=196.17 Aligned_cols=117 Identities=29% Similarity=0.435 Sum_probs=99.0
Q ss_pred CccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 1 m~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
|+.++.||+|+|.|+|+|+|++|+++|++++|++.|+|++|+|+|+ ++..|++.|++...++++++++.+.++|++++|
T Consensus 81 i~~~~~pV~~~v~g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~-~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g 159 (208)
T 2cby_A 81 MVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPL-GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTG 159 (208)
T ss_dssp HHHCSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC-----------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCEEEEECcEeHHHHHHHHhCCCcCCEEEcCCcEEEEeccc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3567899999999999999999999999888999999999999998 677899999999999999999999999999999
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCchhhh
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAY 118 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~~~~ 118 (148)
++.+++.+++++++|||++||++|||||+|.....+..
T Consensus 160 ~~~~~i~~~~~~~~~~ta~eA~e~GLvD~i~~~~~~ll 197 (208)
T 2cby_A 160 QPIERIEADSDRDRWFTAAEALEYGFVDHIITRAHVNG 197 (208)
T ss_dssp CCHHHHHHHHHTTCEEEHHHHHHHTSCSEECSCC----
T ss_pred cCHHHHHHHHhCCcEEcHHHHHHcCCCcEecCchHHHH
Confidence 99999999999999999999999999999998766544
No 8
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.95 E-value=2.2e-28 Score=193.86 Aligned_cols=114 Identities=30% Similarity=0.484 Sum_probs=97.2
Q ss_pred CccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 032040 1 MAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKG 78 (148)
Q Consensus 1 m~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~ 78 (148)
|+.++.||.|+|.|+|+|+|++|+++|++++|++.|||++|+|+|+ ++. .|++.|+++.+++++++++.+.++|+++
T Consensus 99 i~~~~~pV~t~v~G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~ 177 (218)
T 1y7o_A 99 MNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAEN 177 (218)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEccEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999998 666 8999999999999999999999999999
Q ss_pred cCCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 79 TGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 79 Tg~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
+|++.+++++++++++|||++||++|||||+|+++.+
T Consensus 178 ~G~~~~~i~~~~~~~~~~ta~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 178 SGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNS 214 (218)
T ss_dssp HTCCHHHHHHHHHSCCCBCHHHHHHHTSCSEECCCC-
T ss_pred hCCCHHHHHHHHhCCCEEcHHHHHHCCCCcEEcCcCC
Confidence 9999999999999999999999999999999987653
No 9
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.81 E-value=1.8e-20 Score=149.90 Aligned_cols=112 Identities=16% Similarity=0.212 Sum_probs=90.4
Q ss_pred CccccCceEEEe---hhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 032040 1 MAYCKSKVYTVN---CGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVG-RSSGPVTDMWRKAKDLEANAESYIELLA 76 (148)
Q Consensus 1 m~~i~~~V~T~~---~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~-~~~G~~~dl~~~a~~l~~~~~~l~~iya 76 (148)
|+.++.||.++| .|.|+|+|++|+++|+ .|+|.|+|+|++|+|... +..|+..++. .+.+...+ .+.+.|+
T Consensus 63 i~~~~~PVia~v~p~~G~AasaG~~ia~a~d--~~~a~p~a~ig~~~p~~~~~~~G~~~~~~--~k~~~~~~-~~~~~la 137 (230)
T 3viv_A 63 IQQSKIPVIIYVYPPGASAASAGTYIALGSH--LIAMAPGTSIGACRPILGYSQNGSIIEAP--PAITNYFI-AYIKSLA 137 (230)
T ss_dssp HHTCSSCEEEEECSTTCEEETHHHHHHHTSS--EEEECTTCEEECCCEEEEECTTSCEEECC--HHHHHHHH-HHHHHHH
T ss_pred HHhCCCCEEEEEecCCCEEhHHHHHHHHhcC--ceeECCCCEEEeccceecCCCCCCchHHH--HHHHHHHH-HHHHHHH
Confidence 356799999999 9999999999999995 799999999999999731 3456543221 22233333 3457899
Q ss_pred hhcCCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCchhh
Q 032040 77 KGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAA 117 (148)
Q Consensus 77 ~~Tg~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~~~ 117 (148)
+++|++.+.+++++++++||||+||++|||||+|.++..+.
T Consensus 138 ~~~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~~~~l 178 (230)
T 3viv_A 138 QESGRNATIAEEFITKDLSLTPEEALKYGVIEVVARDINEL 178 (230)
T ss_dssp HHTTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSSHHHH
T ss_pred HHhCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCCHHHH
Confidence 99999999999999999999999999999999998765443
No 10
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.38 E-value=1.3e-12 Score=116.14 Aligned_cols=105 Identities=19% Similarity=0.100 Sum_probs=83.0
Q ss_pred CceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCC--C---------------CC--------------CH
Q 032040 6 SKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGR--S---------------SG--------------PV 54 (148)
Q Consensus 6 ~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~--~---------------~G--------------~~ 54 (148)
.||.+++. .++|.+.+|.+++ +++|+.|++.+|+|+|.... + .| +.
T Consensus 121 kpvva~~~-~aas~~y~lAsaa--d~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~ 197 (593)
T 3bf0_A 121 KPVYAVGE-NYSQGQYYLASFA--NKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSP 197 (593)
T ss_dssp CCEEEEES-CEEHHHHHHHTTS--SEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCH
T ss_pred CeEEEEEc-cchhHHHHHHHhC--CEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCH
Confidence 67888764 4777777777777 68999999999999998321 0 02 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhcC-------CCcccHHHHHHcCCceeeecC
Q 032040 55 TDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQR-------PKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 55 ~dl~~~a~~l~~~~~~l~~iya~~Tg~~~e~i~~~m~r-------d~~lta~EA~eyGlID~Ii~~ 113 (148)
.+-+...+.|+.+.+.+.+.+++++|++.+++++++++ ++|||++||+++||||+|...
T Consensus 198 ~~re~~~~~l~~~~~~~~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~ 263 (593)
T 3bf0_A 198 AAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASS 263 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCH
Confidence 22234456677788888899999999999999999998 999999999999999999843
No 11
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.17 E-value=2.1e-10 Score=91.27 Aligned_cols=106 Identities=18% Similarity=0.180 Sum_probs=85.8
Q ss_pred ccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecC---------------------CCCC-------CCC-CH
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLP---------------------VVGR-------SSG-PV 54 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p---------------------~~~~-------~~G-~~ 54 (148)
++.||.+.+.|.|+|.|..|.+++ +.|++.|++++.++-. ..+. +.. +.
T Consensus 78 ~~kPVia~v~g~a~~gG~~lA~a~--D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~ 155 (240)
T 3rst_A 78 TKKPIYVSMGSMAASGGYYISTAA--DKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTK 155 (240)
T ss_dssp HCCCEEEEEEEEEETHHHHHHTTS--SEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCH
T ss_pred CCCeEEEEECCeehHhHHHHHHhC--CeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCH
Confidence 467999999999999999999999 5899999999998822 1110 111 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhcCCCcccHHHHHHcCCceeeec
Q 032040 55 TDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112 (148)
Q Consensus 55 ~dl~~~a~~l~~~~~~l~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~ 112 (148)
.+-+...+.++.+.+.+.+.+++..+++.++++.+++... ++++||+++||||+|..
T Consensus 156 ~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~~~~g~~-~~a~~A~~~GLVD~i~~ 212 (240)
T 3rst_A 156 EEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKKIADGRV-YDGRQAKKLNLVDELGF 212 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHCSSCE-EEHHHHHHTTSSSEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHhcCCc-ccHHHHHHcCCCcccCC
Confidence 4555556777888899999999999999999999887775 59999999999999965
No 12
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=98.96 E-value=2.5e-09 Score=94.98 Aligned_cols=107 Identities=21% Similarity=0.191 Sum_probs=83.9
Q ss_pred ccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCC------------CCC----------------CCCCHH
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPV------------VGR----------------SSGPVT 55 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~------------~~~----------------~~G~~~ 55 (148)
.+.||.+.+.|.|+|.|..|++++ +.|+|.|++.+....+. +|- ..++..
T Consensus 370 ~~kPVia~v~g~AasgG~~iA~aa--D~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~ 447 (593)
T 3bf0_A 370 AGKPVVVSMGGMAASGGYWISTPA--NYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPE 447 (593)
T ss_dssp TTCCEEEEEEEEEETHHHHTTTTC--SEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHH
T ss_pred CCCCEEEEECCChHHHHHHHHHhC--CEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCCCCHH
Confidence 468999999999999999999999 58999999998754310 010 112344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 56 DMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 56 dl~~~a~~l~~~~~~l~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
+.+...+.++.....+.+.+++..|++.+.++.++....| |++||+++||||+|...
T Consensus 448 ~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~-ta~eA~~~GLVD~v~~~ 504 (593)
T 3bf0_A 448 AQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVW-TGQDAKANGLVDSLGDF 504 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEE-EHHHHHHHTSCSEECCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCc-CHHHHHHCCCCcCccCH
Confidence 4455556677777888999999999999999887777655 99999999999999753
No 13
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=97.73 E-value=8e-05 Score=59.16 Aligned_cols=90 Identities=18% Similarity=0.159 Sum_probs=64.0
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...- +.+..|
T Consensus 93 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~------------------l~~~vG 152 (258)
T 2pbp_A 93 IVKTPMIAAVNGLALGGGFELALSC--DLIVASSAAEFGFPEVNLGVMPGAGGTQR------------------LTKLIG 152 (258)
T ss_dssp TCCSCEEEEECSEEETHHHHHHHTS--SEEEEETTCEEECGGGGGTCCCCSSHHHH------------------HHHHHC
T ss_pred hCCCCEEEEEcCEEEhHHHHHHHhC--CEEEEcCCCEEECcccccCCCCcccHHHH------------------HHHHhC
Confidence 4688999999999999999999999 589999999988755543322 122211 111122
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 153 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 184 (258)
T 2pbp_A 153 --PKRALEWLWTGARMSAKEAEQLGIVNRVVSPE 184 (258)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEEECGG
T ss_pred --HHHHHHHHHcCCccCHHHHHHcCCcceeeChH
Confidence 22334445455678999999999999998653
No 14
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=97.67 E-value=0.00014 Score=57.87 Aligned_cols=90 Identities=18% Similarity=0.138 Sum_probs=63.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+.....|.. .|...-+. +..|
T Consensus 95 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~vG 154 (260)
T 1mj3_A 95 RIKKPVIAAVNGYALGGGCELAMMC--DIIYAGEKAQFGQPEILLGTIPGAGGTQRLT------------------RAVG 154 (260)
T ss_dssp GCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSTTTHHH------------------HHHC
T ss_pred hCCCCEEEEECCEEEeHHHHHHHhC--CEEEEcCCCEEeCcccccCCCCCccHHHHHH------------------HHhC
Confidence 4688999999999999999999999 589999999988765543321 22221111 1112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 155 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 186 (260)
T 1mj3_A 155 --KSLAMEMVLTGDRISAQDAKQAGLVSKIFPVE 186 (260)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECTT
T ss_pred --HHHHHHHHHcCCcCCHHHHHHcCCccEEeChH
Confidence 22334444455678999999999999998764
No 15
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=97.67 E-value=0.00011 Score=58.36 Aligned_cols=90 Identities=22% Similarity=0.191 Sum_probs=63.6
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+.....|.. .|...-+ .+..|
T Consensus 92 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~~~vG 151 (257)
T 2ej5_A 92 HLEKPVVAAVNGAAAGAGMSLALAC--DFRLLSEKASFAPAFIHVGLVPDAGHLYYL------------------PRLVG 151 (257)
T ss_dssp HCCSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCTTHHHHH------------------HHHHC
T ss_pred hCCCCEEEEECccccchhHHHHHhC--CEEEEcCCCEEeCcccccCCCCcchHHHHH------------------HHHhC
Confidence 4688999999999999999999999 589999999988754443322 1211111 11122
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 152 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 183 (257)
T 2ej5_A 152 --RAKALELAVLGEKVTAEEAAALGLATKVIPLS 183 (257)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTCCSEEECGG
T ss_pred --HHHHHHHHHhCCccCHHHHHHcCCcceecChh
Confidence 22334445555679999999999999998753
No 16
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=97.65 E-value=6.8e-05 Score=60.02 Aligned_cols=90 Identities=21% Similarity=0.218 Sum_probs=65.0
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+-...+|.. .|... .+.+..|
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~------------------~l~r~vG 164 (275)
T 1dci_A 105 KCPKPVIAAIHGGCIGGGVDLISAC--DIRYCTQDAFFQVKEVDVGLAADVGTLQ------------------RLPKVIG 164 (275)
T ss_dssp HSSSCEEEEECSEEETHHHHHHTTS--SEEEEETTCEEECCGGGGTSCCCSSHHH------------------HGGGTCS
T ss_pred hCCCCEEEEECCeeeHHHHHHHHhC--CEEEEeCCCEEeCcccccCCCCCccHHH------------------HHHHHhC
Confidence 4688999999999999999999999 589999999988755443322 12111 1233444
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
.+ ..-.+++-....++++||+++||||+|..+
T Consensus 165 ~~-~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 196 (275)
T 1dci_A 165 NR-SLVNELTFTARKMMADEALDSGLVSRVFPD 196 (275)
T ss_dssp CH-HHHHHHHHHCCEEEHHHHHHHTSSSEEESS
T ss_pred cH-HHHHHHHHcCCCCCHHHHHHcCCcceecCC
Confidence 31 233445555567999999999999999876
No 17
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=97.65 E-value=0.00011 Score=58.45 Aligned_cols=92 Identities=15% Similarity=0.154 Sum_probs=62.7
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeec--ccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQ--PNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~--pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++. ++++|-+-....|..-+ ..-.. .+.+..|
T Consensus 95 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~~~a~f~~pe~~~Gl~p~-~g~~~---------------~l~~~vG 156 (260)
T 1sg4_A 95 QSNLVLVSAINGACPAGGCLVALTC--DYRILADNPRYCIGLNETQLGIIAP-FWLKD---------------TLENTIG 156 (260)
T ss_dssp TCSSEEEEEECEEBCHHHHHHHTTS--SEEEEECCTTCCBSCCGGGGTCCCC-HHHHH---------------HHHHHHC
T ss_pred cCCCCEEEEECCeeehHHHHHHHhC--CEEEEecCCCCEEeCchhhhCCCCc-hhHHH---------------HHHHHhC
Confidence 4688999999999999999999999 589999 89988764443232211 11110 1122222
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 157 --~~~a~~llltg~~~~a~eA~~~GLv~~vv~~~ 188 (260)
T 1sg4_A 157 --HRAAERALQLGLLFPPAEALQVGIVDQVVPEE 188 (260)
T ss_dssp --HHHHHHHHHHTCCBCHHHHHHHTSSSEEECGG
T ss_pred --HHHHHHHHHcCCcCCHHHHHHcCCCCEecCHH
Confidence 22334455555679999999999999998643
No 18
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=97.64 E-value=0.00013 Score=57.75 Aligned_cols=91 Identities=18% Similarity=0.158 Sum_probs=63.1
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-....|-.- |...-+.. ..|
T Consensus 89 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r------------------~vG 148 (254)
T 3hrx_A 89 GLEKPLVVAVNGVAAGAGMSLALWG--DLRLAAVGASFTTAFVRIGLVPDSGLSFLLPR------------------LVG 148 (254)
T ss_dssp TCSSCEEEEECSEEETHHHHHHTTC--SEEEEETTCEEECCGGGGTCCCCTTHHHHHHH------------------HHC
T ss_pred hCCCCEEEEECCEeeehhhhhhhcc--ceeeEcCCCEEEchhhCcCcCCcccHHHHHHH------------------HhC
Confidence 4688999999999999999999999 5899999999877444433221 22211111 111
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++++||+++||||+|.++..
T Consensus 149 --~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~ 181 (254)
T 3hrx_A 149 --LAKAQELLLLSPRLSAEEALALGLVHRVVPAEK 181 (254)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGG
T ss_pred --cchHHHHhhcCcccCHHHHHHCCCeEEecCcHH
Confidence 122233344445689999999999999998754
No 19
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=97.63 E-value=0.00033 Score=55.82 Aligned_cols=92 Identities=11% Similarity=0.029 Sum_probs=66.3
Q ss_pred ccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 2 AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 2 ~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
..++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+-....|..- |...-+. +..
T Consensus 99 ~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~v 158 (265)
T 3swx_A 99 RQLSKPLLVAVHGKVLTLGIELALAA--DIVIADETATFAQLEVNRGIYPFGGATIRFP------------------RTA 158 (265)
T ss_dssp CCCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTSCCCSSHHHHHH------------------HHH
T ss_pred HhCCCCEEEEEcCeeehHHHHHHHHC--CEEEEcCCCEEECcccccccCCCccHHHHHH------------------HHh
Confidence 45789999999999999999999999 5899999999887544433221 2221111 111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
| ...-.+++-....++++||+++||||+|.++..
T Consensus 159 G--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~ 192 (265)
T 3swx_A 159 G--WGNAMRWMLTADTFDAVEAHRIGIVQEIVPVGE 192 (265)
T ss_dssp C--HHHHHHHHTTCCCEEHHHHHHTTSCSEEESTTC
T ss_pred h--HHHHHHHHHcCCcCCHHHHHHcCCCCEecChhH
Confidence 2 233455666677899999999999999997643
No 20
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=97.63 E-value=0.00032 Score=55.66 Aligned_cols=92 Identities=11% Similarity=0.105 Sum_probs=65.1
Q ss_pred ccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 2 AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 2 ~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
..++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+-....|.. .|...-+. +..
T Consensus 102 ~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~------------------r~v 161 (258)
T 3lao_A 102 PRRSKPLVVAVQGTCWTAGIELMLNA--DIAVAARGTRFAHLEVLRGIPPLGGSTVRFP------------------RAA 161 (258)
T ss_dssp SCCCSCEEEEECSEEETHHHHHHHTS--SEEEEETTCEEECGGGGTCCCSSCCCCSHHH------------------HHH
T ss_pred HhCCCCEEEEECCEeEhHHHHHHHhC--CEEEEcCCCEEeCcccccCCCCCccHHHHHH------------------HHh
Confidence 45789999999999999999999999 589999999887754433321 22222121 111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
| ...-.+++-....++++||+++||||+|.++..
T Consensus 162 G--~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~~ 195 (258)
T 3lao_A 162 G--WTDAMRYILTGDEFDADEALRMRLLTEVVEPGE 195 (258)
T ss_dssp C--HHHHHHHHTTCCCEEHHHHHHTTSCSEEECTTC
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHcCCCcEeeChhH
Confidence 1 223345555666799999999999999998643
No 21
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=97.61 E-value=8.9e-05 Score=58.55 Aligned_cols=90 Identities=13% Similarity=0.100 Sum_probs=62.7
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|. ..+.--. .+.+..|
T Consensus 92 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl----~p~~g~~-------------~l~~~vG-- 150 (250)
T 2a7k_A 92 NVNKPTIAAVDGYAIGMGFQFALMF--DQRLMASTANFVMPELKHGI----GCSVGAA-------------ILGFTHG-- 150 (250)
T ss_dssp TCCSCEEEEECSEEETHHHHHHTTS--SEEEEETTCEEECCGGGGTC----CCHHHHH-------------HHHHHHC--
T ss_pred cCCCCEEEEECCeEeHHHHHHHHhC--CEEEEcCCCEEeCcccccCC----CCCcHHH-------------HHHHHhH--
Confidence 4688999999999999999999999 58999999988774443221 1111100 1112222
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
...-.+++-....++++||+++||||+|.++
T Consensus 151 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 181 (250)
T 2a7k_A 151 FSTMQEIIYQCQSLDAPRCVDYRLVNQVVES 181 (250)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTCCSEEECH
T ss_pred HHHHHHHHHcCCcccHHHHHHcCCcceecCH
Confidence 2233444545567999999999999999865
No 22
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=97.61 E-value=7.5e-05 Score=59.10 Aligned_cols=91 Identities=15% Similarity=0.151 Sum_probs=64.3
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|- ..+.- .. .+.+..|
T Consensus 92 ~~~kPvIAav~G~a~GgG~~lal~c--D~~ia~~~a~f~~pe~~~Gl----~p~~g--~~-----------~l~r~vG-- 150 (253)
T 1uiy_A 92 TYPKPTVAAVNGPAVAGGAGLALAC--DLVVMDEEARLGYTEVKIGF----VAALV--SV-----------ILVRAVG-- 150 (253)
T ss_dssp HCSSCEEEEECSCEETHHHHHHHTS--SEEEEETTCEEECCHHHHTC----CCHHH--HH-----------HHHHHSC--
T ss_pred hCCCCEEEEECCeeeHHHHHHHHhC--CEEEEcCCcEEeCcccccCc----CCchH--HH-----------HHHHHhC--
Confidence 4688999999999999999999999 58999999988774333221 11111 00 1222233
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 151 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 182 (253)
T 1uiy_A 151 EKAAKDLLLTGRLVEAREAKALGLVNRIAPPG 182 (253)
T ss_dssp HHHHHHHHHHCCEEEHHHHHHHTSCSEEECTT
T ss_pred HHHHHHHHHhCCccCHHHHHHCCCcceecChh
Confidence 33445555556689999999999999998754
No 23
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=97.60 E-value=0.00034 Score=56.11 Aligned_cols=91 Identities=12% Similarity=0.053 Sum_probs=65.0
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...-|. +..|
T Consensus 113 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~------------------r~vG 172 (278)
T 4f47_A 113 RLKKPLIAAVEGPAIAGGTEILQGT--DIRVAAESAKFGISEAKWSLYPMGGSAVRLV------------------RQIP 172 (278)
T ss_dssp CCSSCEEEEECSEEETHHHHHHTTC--SEEEEETTCEEECCGGGGTCCCTTSHHHHHH------------------HHSC
T ss_pred CCCCCEEEEECCEEehHHHHHHHhC--CEEEEcCCCEEECcccccCCCCCccHHHHHH------------------HHhC
Confidence 6789999999999999999999999 589999999987644443322 22222221 1122
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++++||+++||||+|..+..
T Consensus 173 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~ 205 (278)
T 4f47_A 173 --YTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQ 205 (278)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEEECTTC
T ss_pred --HHHHHHHHHcCCcCCHHHHHHCCCceEeeChhH
Confidence 233344454556789999999999999987653
No 24
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=97.60 E-value=0.00015 Score=57.74 Aligned_cols=90 Identities=14% Similarity=0.107 Sum_probs=63.0
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccC-eeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNS-STKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna-~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.+++ +|-+-....|.. .|...- +.+..
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~ag~f~~pe~~~Gl~p~~g~~~~------------------l~~~v 158 (265)
T 2ppy_A 99 RSPQVYIACLEGHTVGGGLEMALAC--DLRFMGDEAGKIGLPEVSLGVLAGTGGTQR------------------LARLI 158 (265)
T ss_dssp HSSSEEEEEECSEEETHHHHHHHTS--SEEEEETTCCCEECCGGGGTCCCTTTHHHH------------------HHHHH
T ss_pred cCCCCEEEEECCEEeeHHHHHHHhC--CEEEEeCCCCEEECcccccCCCCCchHHHH------------------HHHHh
Confidence 4688999999999999999999999 589999999 887754443322 121111 11222
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++++||+++||||+|..+.
T Consensus 159 G--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 191 (265)
T 2ppy_A 159 G--YSRALDMNITGETITPQEALEIGLVNRVFPQA 191 (265)
T ss_dssp C--HHHHHHHHHHCCCBCHHHHHHHTSSSEEECGG
T ss_pred C--HHHHHHHHHhCCccCHHHHHHCCCcceecCHH
Confidence 2 22334444445569999999999999998753
No 25
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=97.60 E-value=0.0001 Score=58.81 Aligned_cols=90 Identities=17% Similarity=0.167 Sum_probs=63.9
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-....|.. .|...-+.. ..|
T Consensus 96 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r------------------~vG 155 (261)
T 3pea_A 96 KCSKPVIAAIHGAALGGGLEFAMSC--HMRFATESAKLGLPELTLGLIPGFAGTQRLPR------------------YVG 155 (261)
T ss_dssp TCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCSSHHHHHHH------------------HHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECcccccCcCCCccHHHHHHH------------------HhC
Confidence 4688999999999999999999999 589999999988754443322 222222211 112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 156 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 187 (261)
T 3pea_A 156 --KAKACEMMLTSTPITGAEALKWGLVNGVFAEE 187 (261)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEecCHH
Confidence 23334444445679999999999999998764
No 26
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=97.59 E-value=0.00017 Score=57.23 Aligned_cols=89 Identities=15% Similarity=0.172 Sum_probs=65.1
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+.....|..-| . . .+.+..|
T Consensus 96 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~pg-~-------~-----------~l~~~vG-- 152 (254)
T 3isa_A 96 GSPSLTLALAHGRNFGAGVDLFAAC--KWRYCTPEAGFRMPGLKFGLVLG-T-------R-----------RFRDIVG-- 152 (254)
T ss_dssp TCSSEEEEEECSEEETHHHHHHHHS--SEEEECTTCEEECCGGGGTCCCS-H-------H-----------HHHHHHC--
T ss_pred hCCCCEEEEECCeEeecchhHHHhC--CEEEEcCCCEEECchhccCccHH-H-------H-----------HHHHHcC--
Confidence 4678999999999999999999999 58999999998875554343322 1 0 1122222
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 153 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 184 (254)
T 3isa_A 153 ADQALSILGSARAFDADEARRIGFVRDCAAQA 184 (254)
T ss_dssp HHHHHHHHTTTCEEEHHHHHHTTSSSEECCGG
T ss_pred HHHHHHHHHhCCCCcHHHHHHCCCccEEeChh
Confidence 23344556666789999999999999998754
No 27
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=97.59 E-value=0.00011 Score=58.82 Aligned_cols=90 Identities=20% Similarity=0.183 Sum_probs=63.9
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...-+.. ..|
T Consensus 100 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r------------------~vG 159 (265)
T 3kqf_A 100 QLPQPVIAAINGIALGGGTELSLAC--DFRIAAESASLGLTETTLAIIPGAGGTQRLPR------------------LIG 159 (265)
T ss_dssp TCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCSSHHHHHHH------------------HHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCcEEECcccccCcCCCccHHHHHHH------------------HhC
Confidence 4688999999999999999999999 589999999988755443322 222222211 111
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 160 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 191 (265)
T 3kqf_A 160 --VGRAKELIYTGRRISAQEAKEYGLVEFVVPVH 191 (265)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEEeCHH
Confidence 22333444455679999999999999998754
No 28
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=97.59 E-value=0.00011 Score=58.64 Aligned_cols=91 Identities=15% Similarity=0.071 Sum_probs=63.6
Q ss_pred ccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 2 AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 2 ~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
..++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+.....|.. .|...-+ .+..
T Consensus 89 ~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L------------------~r~v 148 (256)
T 3pe8_A 89 PDMTKPVIGAINGAAVTGGLELALYC--DILIASENAKFADTHARVGLMPTWGLSVRL------------------PQKV 148 (256)
T ss_dssp CCCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTCCCCSSHHHHH------------------HHHH
T ss_pred HhCCCCEEEEECCeeechHHHHHHhC--CEEEEcCCCEEECchhhhCCCCcccHHHHH------------------HHhc
Confidence 45788999999999999999999999 589999999987744332322 2222211 1111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++++||+++||||+|.++.
T Consensus 149 G--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 181 (256)
T 3pe8_A 149 G--VGLARRMSLTGDYLSAQDALRAGLVTEVVAHD 181 (256)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSCSCEECGG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCCeEEeCHh
Confidence 1 22333444445669999999999999998764
No 29
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=97.59 E-value=9.5e-05 Score=59.44 Aligned_cols=90 Identities=21% Similarity=0.258 Sum_probs=63.5
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC-C--CCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS-S--GPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~-~--G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-....|.. - |...-+. +..
T Consensus 111 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~------------------r~v 170 (279)
T 3g64_A 111 ECPFPVIAALHGVAAGAGAVLALAA--DFRVADPSTRFAFLFTRVGLSGGDMGAAYLLP------------------RVV 170 (279)
T ss_dssp HSSSCEEEEECSEEETHHHHHHHHS--SEEEECTTCEEECCGGGGTCCSCCTTHHHHHH------------------HHH
T ss_pred hCCCCEEEEEcCeeccccHHHHHhC--CEEEEeCCCEEeCchhhcCCCCCchhHHHHHH------------------HHh
Confidence 4688999999999999999999999 589999999987754443322 1 2221111 111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++++||+++||||+|..+.
T Consensus 171 G--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 203 (279)
T 3g64_A 171 G--LGHATRLLMLGDTVRAPEAERIGLISELTEEG 203 (279)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTCCSEECCTT
T ss_pred C--HHHHHHHHHcCCCcCHHHHHHCCCCCEecCch
Confidence 1 22334444455679999999999999998764
No 30
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=97.58 E-value=0.0001 Score=59.68 Aligned_cols=91 Identities=18% Similarity=0.128 Sum_probs=64.7
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....| -..+.-- .. +.+..|
T Consensus 124 ~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~lG----l~p~~g~------------~~-L~r~vG-- 182 (287)
T 2vx2_A 124 NHPVPVIAMVNGLATAAGCQLVASC--DIAVASDKSSFATPGVNVG----LFCSTPG------------VA-LARAVP-- 182 (287)
T ss_dssp TCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGT----CCCHHHH------------HH-HHTTSC--
T ss_pred hCCCCEEEEECCEEEcHHHHHHHhC--CEEEEcCCCEEECchhhhC----CCCchHH------------HH-HHHHhh--
Confidence 4688999999999999999999999 5899999999887444422 1111110 01 233333
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|..+.
T Consensus 183 ~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~ 214 (287)
T 2vx2_A 183 RKVALEMLFTGEPISAQEALLHGLLSKVVPEA 214 (287)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred HHHHHHHHHhCCCCCHHHHHHCCCcceecCHH
Confidence 33444555556679999999999999998753
No 31
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=97.58 E-value=0.0001 Score=59.16 Aligned_cols=90 Identities=16% Similarity=0.159 Sum_probs=64.4
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...-+ .+..|
T Consensus 103 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~r~vG 162 (272)
T 1hzd_A 103 NLPVPTIAAIDGLALGGGLELALAC--DIRVAASSAKMGLVETKLAIIPGGGGTQRL------------------PRAIG 162 (272)
T ss_dssp TCSSCEEEEESEEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCSSHHHHH------------------HHHHC
T ss_pred hCCCCEEEEeCceEEecHHHHHHhC--CEEEEcCCCEEeCchhccCCCCCchHHHHH------------------HHHhC
Confidence 4688999999999999999999999 589999999988765554322 1211111 11122
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 163 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 194 (272)
T 1hzd_A 163 --MSLAKELIFSARVLDGKEAKAVGLISHVLEQN 194 (272)
T ss_dssp --HHHHHHHHHHTCEEEHHHHHHHTSCSEEECCC
T ss_pred --HHHHHHHHHcCCcCCHHHHHHCCCcceecChh
Confidence 22334445556678999999999999998754
No 32
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=97.57 E-value=0.0002 Score=56.80 Aligned_cols=90 Identities=18% Similarity=0.174 Sum_probs=63.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+-....|..- |...- +.+..|
T Consensus 89 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~------------------l~r~vG 148 (254)
T 3gow_A 89 GLEKPLVVAVNGVAAGAGMSLALWG--DLRLAAVGASFTTAFVRIGLVPDSGLSFL------------------LPRLVG 148 (254)
T ss_dssp TCSSCEEEEECSEEETHHHHHHTTC--SEEEEETTCEEECCGGGGTCCCCTTHHHH------------------HHHHHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHHC--CEEEEcCCCEEeCcccccCCCCCccHHHH------------------HHHHhC
Confidence 4688999999999999999999999 5899999999877544433221 21111 111122
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 149 --~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 180 (254)
T 3gow_A 149 --LAKAQELLLLSPRLSAEEALALGLVHRVVPAE 180 (254)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred --HHHHHHHHHcCCccCHHHHHHcCCCCEecCHH
Confidence 22234455556679999999999999998764
No 33
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=97.55 E-value=0.00027 Score=55.40 Aligned_cols=92 Identities=17% Similarity=0.105 Sum_probs=64.0
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|-.-+.. -.. .+.++.|
T Consensus 93 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~~~~~-g~~---------------~l~~~~g-- 152 (233)
T 3r6h_A 93 SYPKPVVIACTGHAIAMGAFLLCSG--DHRVAAHAYNVQANEVAIGMTIPYA-AME---------------VLKLRLT-- 152 (233)
T ss_dssp TCSSCEEEEECSEEETHHHHHHTTS--SEEEECTTCCEECCGGGGTCCCCHH-HHH---------------HHHHHSC--
T ss_pred hCCCCEEEEECCcchHHHHHHHHhC--CEEEEeCCcEEECchhhhCCCCCcc-HHH---------------HHHHHhC--
Confidence 4688999999999999999999999 5899999998877443323211111 110 1112222
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|.++.
T Consensus 153 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 184 (233)
T 3r6h_A 153 PSAYQQAAGLAKTFFGETALAAGFIDEISLPE 184 (233)
T ss_dssp HHHHHHHHHSCCEECHHHHHHHTSCSEECCGG
T ss_pred HHHHHHHHHcCCcCCHHHHHHcCCCcEeeCHH
Confidence 23344555566789999999999999998764
No 34
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=97.55 E-value=0.00019 Score=57.01 Aligned_cols=90 Identities=17% Similarity=0.113 Sum_probs=62.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-...+|..- |...-+ .+..|
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~~~vG 158 (261)
T 2gtr_A 99 QFKKPIIVAVNGPAIGLGASILPLC--DVVWANEKAWFQTPYTTFGQSPDGCSTVMF------------------PKIMG 158 (261)
T ss_dssp HCCSCEEEEECSCEETHHHHTGGGS--SEEEEETTCEEECCTTTTTCCCCTTHHHHH------------------HHHHC
T ss_pred hCCCCEEEEECCeEeeHHHHHHHhC--CEEEEcCCCEEeCchhccCCCccchHHHHH------------------HHHcC
Confidence 4688999999999999999999999 5899999998887544433221 211111 11122
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 159 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 190 (261)
T 2gtr_A 159 --GASANEMLLSGRKLTAQEACGKGLVSQVFWPG 190 (261)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEEECGG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCcccccChh
Confidence 23334444445569999999999999998753
No 35
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=97.54 E-value=0.00017 Score=58.18 Aligned_cols=91 Identities=18% Similarity=0.147 Sum_probs=64.5
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...-+. +..|
T Consensus 113 ~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~lGl~p~~g~~~~L~------------------r~vG 172 (278)
T 3h81_A 113 AVRTPTIAAVAGYALGGGCELAMMC--DVLIAADTAKFGQPEIKLGVLPGMGGSQRLT------------------RAIG 172 (278)
T ss_dssp TCCSCEEEEECBEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHHC--CEEEEcCCCEEECchhhcCcCCCccHHHHHH------------------HHhC
Confidence 4688999999999999999999999 589999999988755443322 22221111 1112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++++||+++||||+|..+..
T Consensus 173 --~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~ 205 (278)
T 3h81_A 173 --KAKAMDLILTGRTMDAAEAERSGLVSRVVPADD 205 (278)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGG
T ss_pred --HHHHHHHHHhCCCcCHHHHHHCCCccEEeChhH
Confidence 223344444456799999999999999987643
No 36
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=97.54 E-value=0.00022 Score=56.49 Aligned_cols=90 Identities=16% Similarity=0.187 Sum_probs=62.7
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+.....|.. .|...-+... + |
T Consensus 97 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~----------v--------G 156 (256)
T 3qmj_A 97 GFPKPLICAVNGLGVGIGATILGYA--DLAFMSSTARLKCPFTSLGVAPEAASSYLLPQL----------V--------G 156 (256)
T ss_dssp HCCSCEEEEECSEEETHHHHGGGGC--SEEEEETTCEEECCGGGC---CCTTHHHHHHHH----------H--------H
T ss_pred hCCCCEEEEECCeehhHHHHHHHhC--CEEEEeCCCEEECcccccCCCCCccHHHHHHHH----------h--------C
Confidence 4688999999999999999999999 589999999988755443322 1222111111 0 1
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 157 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 188 (256)
T 3qmj_A 157 --RQNAAWLLMSSEWIDAEEALRMGLVWRICSPE 188 (256)
T ss_dssp --HHHHHHHHHSCCCEEHHHHHHHTSSSEEECGG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEEeCHh
Confidence 12234445556678999999999999998764
No 37
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=97.53 E-value=0.00032 Score=55.92 Aligned_cols=90 Identities=14% Similarity=0.130 Sum_probs=64.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|..- |...-+. +..|
T Consensus 100 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------~~vG 159 (265)
T 3rsi_A 100 TLTKPLIAAVNGACLGGGCEMLQQT--DIRVSDEHATFGLPEVQRGLVPGAGSMVRLK------------------RQIP 159 (265)
T ss_dssp CCSSCEEEEECSCEETHHHHHHTTC--SEEEEETTCEEECGGGGGTCCCTTTHHHHHH------------------HHSC
T ss_pred CCCCCEEEEECCeeeHHHHHHHHHC--CEEEecCCCEEECchhccCCCCCccHHHHHH------------------HHhC
Confidence 6789999999999999999999999 5899999999877544433221 2121111 1222
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 160 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 191 (265)
T 3rsi_A 160 --YTKAMEMILTGEPLTAFEAYHFGLVGHVVPAG 191 (265)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEEESTT
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEecChh
Confidence 23334455556779999999999999998764
No 38
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=97.52 E-value=0.00015 Score=57.57 Aligned_cols=90 Identities=18% Similarity=0.139 Sum_probs=63.4
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+-....|..- |...-+. +..|
T Consensus 90 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~vG 149 (255)
T 3p5m_A 90 SLPKPVIAGVHGAAVGFGCSLALAC--DLVVAAPASYFQLAFTRVGLMPDGGASALLP------------------LLIG 149 (255)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHS--SEEEECTTCEEECGGGGGTCCCCTTHHHHTH------------------HHHC
T ss_pred hCCCCEEEEeCCeehhhHHHHHHHC--CEEEEcCCcEEeCcccccCcCCCccHHHHHH------------------HHhC
Confidence 4688999999999999999999999 5899999998877544433221 2221111 1112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 150 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 181 (255)
T 3p5m_A 150 --RARTSRMAMTAEKISAATAFEWGMISHITSAD 181 (255)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEECCTT
T ss_pred --HHHHHHHHHcCCCcCHHHHHHCCCCCEeeCHH
Confidence 22234444455679999999999999998764
No 39
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=97.52 E-value=0.00015 Score=58.00 Aligned_cols=92 Identities=13% Similarity=0.068 Sum_probs=63.0
Q ss_pred ccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 032040 2 AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGK 81 (148)
Q Consensus 2 ~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~ 81 (148)
..++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-....|..- .-- ...+.+..|.
T Consensus 107 ~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p--~g~---------------~~~L~r~vG~ 167 (274)
T 3tlf_A 107 RTMAKPVLTAVNGICCGAGMDWVTTT--DIVIASEQATFFDPHVSIGLVA--GRE---------------LVRVSRVLPR 167 (274)
T ss_dssp TSCCSCEEEEECSEEEGGGHHHHHHS--SEEEEETTCEEECCGGGGTCCC--CHH---------------HHHHTTTSCH
T ss_pred HhCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECcccccCccc--chH---------------HHHHHHHhCH
Confidence 45688999999999999999999999 5899999999887444322211 100 1122233332
Q ss_pred CHHHHHHhhcCCC--cccHHHHHHcCCceeeecCc
Q 032040 82 PKEEIAKDIQRPK--YMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 82 ~~e~i~~~m~rd~--~lta~EA~eyGlID~Ii~~~ 114 (148)
..-.+++-... .++|+||+++||||+|..+.
T Consensus 168 --~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~ 200 (274)
T 3tlf_A 168 --SIALRMALMGKHERMSAQRAYELGLISEIVEHD 200 (274)
T ss_dssp --HHHHHHHHHGGGCCEEHHHHHHHTSSSEEECGG
T ss_pred --HHHHHHHHcCCCCccCHHHHHHCCCCCeecCHH
Confidence 22233333333 89999999999999998764
No 40
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=97.51 E-value=0.00016 Score=59.70 Aligned_cols=89 Identities=11% Similarity=0.042 Sum_probs=64.7
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....+..-+.. + + .+..|
T Consensus 155 ~~~kPvIAaV~G~a~GgG~~Lalac--D~rias~~a~f~~pe~~lG~~P~~g--~------l-----------~~~vG-- 211 (333)
T 3njd_A 155 HCDKPTVVKIHGYCVAGGTDIALHA--DQVIAAADAKIGYPPMRVWGVPAAG--L------W-----------AHRLG-- 211 (333)
T ss_dssp HSSSCEEEEECSEEETHHHHHHTTS--SEEEECTTCEEECGGGGTTCCCTTC--C------H-----------HHHHC--
T ss_pred hCCCCEEEEECCEEeHHHHHHHHhC--CEEEECCCCeeechhhceeccCHHH--H------H-----------HHHHH--
Confidence 3688999999999999999999999 5899999999877544333222111 0 1 11122
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 212 ~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~ 243 (333)
T 3njd_A 212 DQRAKRLLFTGDCITGAQAAEWGLAVEAPDPA 243 (333)
T ss_dssp HHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGG
T ss_pred HHHHHHHHhcCCCCCHHHHHHCCCccEecChH
Confidence 34445566667789999999999999998754
No 41
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.51 E-value=0.00022 Score=59.29 Aligned_cols=81 Identities=19% Similarity=0.254 Sum_probs=54.7
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
..+.||.+++.|-|.|.|+.+++++ +.++|.|+|+|.+=.|. |-+.-+.. .....
T Consensus 196 ~~~vPvIavV~G~a~GGGa~~~~~~--D~via~~~A~~~v~~pe-----g~a~il~~---~~~~a--------------- 250 (327)
T 2f9i_A 196 SLKVPVIAIVIGEGGSGGALGIGIA--NKVLMLENSTYSVISPE-----GAAALLWK---DSNLA--------------- 250 (327)
T ss_dssp TCSSCEEEEEEEEEBHHHHHTTCCC--SEEEEETTCBCBSSCHH-----HHHHHHSS---CGGGH---------------
T ss_pred hCCCCEEEEEECCcChHHHHHHHCC--CEEEEcCCceEeecCch-----HHHHHHHH---Hhcch---------------
Confidence 3578999999999999999888887 57999999988752221 11111100 00000
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
.+..+. ..++|++|++.|+||+|+..
T Consensus 251 -~~A~e~----~~itA~~a~~~GlVd~VV~e 276 (327)
T 2f9i_A 251 -KIAAET----MKITAHDIKQLGIIDDVISE 276 (327)
T ss_dssp -HHHHHH----HTCBHHHHHHTTSSSEEECC
T ss_pred -HHHHHH----cCCCHHHHHHcCCceEEecC
Confidence 011111 56999999999999999984
No 42
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=97.51 E-value=0.0003 Score=56.99 Aligned_cols=91 Identities=16% Similarity=0.098 Sum_probs=62.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS---GPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~---G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-....|..- |...-+. +..
T Consensus 121 ~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~------------------r~v 180 (290)
T 3sll_A 121 RMHQPVIAAINGAAIGGGLCLALAC--DVRVASQDAYFRAAGINNGLTASELGLSYLLP------------------RAI 180 (290)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECTTTTTTSCSCCTTHHHHHH------------------HHH
T ss_pred hCCCCEEEEECCeehHHHHHHHHHC--CEEEEeCCCEEECchhccCcCCCcccHHHHHH------------------HHh
Confidence 4688999999999999999999999 5899999999877443333221 2111111 111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
| ...-.+++-....++|+||+++||||+|.++..
T Consensus 181 G--~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~ 214 (290)
T 3sll_A 181 G--TSRASDIMLTGRDVDADEAERIGLVSRKVASES 214 (290)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCccEEeChhH
Confidence 2 222334444455799999999999999987643
No 43
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=97.50 E-value=0.00035 Score=55.57 Aligned_cols=91 Identities=11% Similarity=0.090 Sum_probs=65.0
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+-....|.. .|...-+ .+..|
T Consensus 91 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~r~vG 150 (256)
T 3trr_A 91 PPRKPIIAAVEGFALAGGTELVLSC--DLVVAGRSAKFGIPEVKRGLVAGAGGLLRL------------------PNRIP 150 (256)
T ss_dssp CCSSCEEEEECSBCCTHHHHHHHTS--SEEEEETTCEECCCGGGGTCCCCSSHHHHH------------------HHHSC
T ss_pred cCCCCEEEEECCeeeechhHHHHhC--CEEEECCCCEEEehhhccCCCCCccHHHHH------------------HHHhC
Confidence 3578999999999999999999999 589999999987644332322 1222111 11222
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++++||+++||||+|..+..
T Consensus 151 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~ 183 (256)
T 3trr_A 151 --YQVAMELALTGESFTAEDAAKYGFINRLVDDGQ 183 (256)
T ss_dssp --HHHHHHHHHHCCCEEHHHHGGGTCCSEEECTTC
T ss_pred --HHHHHHHHHhCCCcCHHHHHHCCCeeEecChHH
Confidence 344455666667899999999999999987643
No 44
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=97.50 E-value=0.00025 Score=56.87 Aligned_cols=90 Identities=19% Similarity=0.117 Sum_probs=64.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+.....|.. .|...-+ .+..|
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~~~vG 164 (273)
T 2uzf_A 105 IIPKPVIAMVKGYAVGGGNVLNVVC--DLTIAADNAIFGQTGPKVGSFDAGYGSGYL------------------ARIVG 164 (273)
T ss_dssp HSSSCEEEEECEEEETHHHHHHHHS--SEEEEETTCEEECCGGGTTCCCCSTTTHHH------------------HHHHC
T ss_pred hCCCCEEEEECCEEeehhHHHHHhC--CEEEEcCCCEEECchhhhCCCCchhHHHHH------------------HHHhC
Confidence 4678999999999999999999999 589999999988755443322 2222221 11122
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 165 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 196 (273)
T 2uzf_A 165 --HKKAREIWYLCRQYNAQEALDMGLVNTVVPLE 196 (273)
T ss_dssp --HHHHHHHHHTCCCEEHHHHHHHTSSSEEECGG
T ss_pred --HHHHHHHHHhCCCCCHHHHHHcCCCccccCHH
Confidence 22334555566789999999999999998653
No 45
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=97.50 E-value=0.0002 Score=57.47 Aligned_cols=90 Identities=13% Similarity=0.058 Sum_probs=63.9
Q ss_pred ccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 2 AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 2 ~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
..++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....|..- |...- +.+..
T Consensus 103 ~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~------------------l~r~v 162 (276)
T 2j5i_A 103 RMYAKPTIAMVNGWCFGGGFSPLVAC--DLAICADEATFGLSEINWGIPPGNLVSKA------------------MADTV 162 (276)
T ss_dssp TTCSSCEEEEECSCEEGGGHHHHHHS--SEEEEETTCEEECGGGGGTCCCCTTHHHH------------------HHHHS
T ss_pred HhCCCCEEEEECCeeehhHHHHHHhC--CEEEEcCCCEEeCcccccCCCCcchHHHH------------------HHHHh
Confidence 45688999999999999999999999 5899999999887544433221 21111 11222
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
| ...-.+++-....++|+||+++||||+|.++
T Consensus 163 G--~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~ 194 (276)
T 2j5i_A 163 G--HRQSLMYIMTGKTFGGQKAAEMGLVNESVPL 194 (276)
T ss_dssp C--HHHHHHHHHHCCEEEHHHHHHHTSSSEEECH
T ss_pred C--HHHHHHHHHhCCcccHHHHHHcCCccEeeCH
Confidence 2 2333445555667999999999999999864
No 46
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=97.49 E-value=0.00019 Score=59.95 Aligned_cols=81 Identities=19% Similarity=0.150 Sum_probs=54.5
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
..+.||.+++.|-|.|.|+.+++++ +.++|.|+|++-+=.|. |-+.-+. ... . .
T Consensus 210 ~~~vPvIavV~G~a~GGGa~~~~~~--D~via~p~A~~~v~~Pe-----g~asil~---~~~---------------~-~ 263 (339)
T 2f9y_A 210 RLGVPVVCTVIGEGGSGGALAIGVG--DKVNMLQYSTYSVISPE-----GCASILW---KSA---------------D-K 263 (339)
T ss_dssp TCSSCEEEEEEEEEEHHHHHTTCCC--SEEEECTTCEEESSCHH-----HHHHHHS---SCS---------------T-T
T ss_pred hCCCCEEEEEeCCcCcHHHHHHhcc--CeeeecCCCEEEeeccc-----hHHHHHH---Hhh---------------c-c
Confidence 3578999999999999999888887 57999999998762221 1011000 000 0 0
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
..+..+. ..+||++|++.||||+|+..
T Consensus 264 ~~~Aae~----~~itA~~a~~~GlVd~VV~e 290 (339)
T 2f9y_A 264 APLAAEA----MGIIRPRLKELKLIDSIIPE 290 (339)
T ss_dssp HHHHHHH----HTCSHHHHHTTTSCSCCCCC
T ss_pred HHHHHHH----cCCCHHHHHHcCCeeEEecC
Confidence 0111122 56999999999999999984
No 47
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=97.47 E-value=0.00031 Score=56.41 Aligned_cols=91 Identities=15% Similarity=0.111 Sum_probs=64.2
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|..- |...-+. +..|
T Consensus 109 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~------------------r~vG 168 (274)
T 4fzw_C 109 KLPKPVICAVNGVAAGAGATLALGG--DIVIAARSAKFVMAFSKLGLIPDCGGTWLLP------------------RVAG 168 (274)
T ss_dssp HCSSCEEEEECSCEETHHHHHHHTS--SEEEEETTCEEECCGGGTTCCCTTTHHHHHH------------------HHTC
T ss_pred HCCCCEEEEECCceeecCceeeecc--ceEEECCCCEEECcccCcccCCCccHHHHHH------------------HHhh
Confidence 4688999999999999999999999 5899999999987555433221 2111111 1111
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++|+||+++||||+|.++..
T Consensus 169 --~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~ 201 (274)
T 4fzw_C 169 --RARAMGLALLGNQLSAEQAHEWGMIWQVVDDET 201 (274)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSSSEEECGGG
T ss_pred --HHHHHHHHHhCCcCCHHHHHHCCCceEEeChHH
Confidence 223334444456799999999999999987643
No 48
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=97.47 E-value=0.00031 Score=56.09 Aligned_cols=91 Identities=18% Similarity=0.097 Sum_probs=62.2
Q ss_pred ccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 2 AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 2 ~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
..++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....|..- |...-+... +
T Consensus 95 ~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~----------v-------- 154 (265)
T 3qxz_A 95 FELRTPVIAAVNGHAIGIGMTLALHA--DIRILAEEGRYAIPQVRFGVAPDALAHWTLPRL----------V-------- 154 (265)
T ss_dssp GGSSSCEEEEECSEEETHHHHHHTTS--SEEEEETTCCEECCGGGGTSCCCTTHHHHTHHH----------H--------
T ss_pred HhCCCCEEEEECCEEehHhHHHHHHC--CEEEEcCCCEEECcccccCcCCCccHHHHHHHH----------h--------
Confidence 45688999999999999999999999 5899999999877444433221 222111111 0
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++|+||+++||||+|.++.
T Consensus 155 G--~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~ 187 (265)
T 3qxz_A 155 G--TAVAAELLLTGASFSAQRAVETGLANRCLPAG 187 (265)
T ss_dssp H--HHHHHHHHHHCCCBCHHHHHHHTSCSEEECHH
T ss_pred C--HHHHHHHHHcCCCcCHHHHHHCCCccEeeCHH
Confidence 1 11123334344578999999999999998754
No 49
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=97.47 E-value=0.00024 Score=56.75 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=64.2
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||...+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...-+. +..|
T Consensus 98 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------~~vG 157 (263)
T 3moy_A 98 QVRKPIVAAVAGYALGGGCELAMLC--DLVIAADTARFGQPEITLGILPGLGGTQRLT------------------RAVG 157 (263)
T ss_dssp TCCSCEEEEECBEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCSSSTTTHHH------------------HHHC
T ss_pred hCCCCEEEEECCEeehHHHHHHHHC--CEEEecCCCEEeCcccccCCCCchhHHHHHH------------------HHhC
Confidence 4688999999999999999999999 579999999887754443321 22222211 1111
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++++||+++||||+|.++..
T Consensus 158 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~ 190 (263)
T 3moy_A 158 --KAKAMDLCLTGRSLTAEEAERVGLVSRIVPAAD 190 (263)
T ss_dssp --HHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEecCchH
Confidence 123334444566899999999999999987643
No 50
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=97.47 E-value=0.00043 Score=54.21 Aligned_cols=92 Identities=18% Similarity=0.175 Sum_probs=64.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeeccc-CeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN-SSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGK 81 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pn-a~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~ 81 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++ ++|-+-....|..-+ +.-. ..+..+.|
T Consensus 92 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~~a~f~~pe~~~Gl~p~---~~g~-------------~~l~~~ig- 152 (232)
T 3ot6_A 92 SHPFPIIVACPGHAVAKGAFLLLSA--DYRIGVAGPFSIGLNEVQIGMTMH---HAGI-------------ELARDRLR- 152 (232)
T ss_dssp TCSSCEEEECCEEEETHHHHHHTTS--SEEEEECSSCCEECCTTTTTCCCC---HHHH-------------HHHHHHSC-
T ss_pred cCCCCEEEEECCEeehHHHHHHHHC--CEEEEeCCCcEEECcccccCCCCc---hhHH-------------HHHHHHhC-
Confidence 4688999999999999999999999 58999998 787774433221111 1110 01112222
Q ss_pred CHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 82 PKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 82 ~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|.++.
T Consensus 153 -~~~a~~l~ltg~~i~A~eA~~~GLv~~vv~~~ 184 (232)
T 3ot6_A 153 -KSAFNRSVINAEMFDPEGAMAAGFLDKVVSVE 184 (232)
T ss_dssp -HHHHHHHHTSCCEECHHHHHHHTSCSEEECTT
T ss_pred -HHHHHHHHHcCCccCHHHHHHCCCCCEecCHH
Confidence 34456667777889999999999999998764
No 51
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=97.46 E-value=0.00038 Score=56.00 Aligned_cols=90 Identities=17% Similarity=0.103 Sum_probs=64.7
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....|..- |...-+ .+..|
T Consensus 119 ~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L------------------~r~vG 178 (280)
T 2f6q_A 119 DFPKPLIAVVNGPAVGISVTLLGLF--DAVYASDRATFHTPFSHLGQSPEGCSSYTF------------------PKIMS 178 (280)
T ss_dssp SCCSCEEEEECSCEETHHHHGGGGC--SEEEEETTCEEECCTGGGTCCCCTTHHHHH------------------HHHHC
T ss_pred cCCCCEEEEECCeeehHHHHHHHhC--CEEEECCCcEEECchHhhCCCCcccHHHHH------------------HHHhC
Confidence 4688999999999999999999999 5899999999887544433221 211111 11222
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|.++.
T Consensus 179 --~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~ 210 (280)
T 2f6q_A 179 --PAKATEMLIFGKKLTAGEACAQGLVTEVFPDS 210 (280)
T ss_dssp --HHHHHHHHTTCCCEEHHHHHHTTSCSEEECTT
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCcceEECHH
Confidence 23345556667779999999999999998754
No 52
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=97.46 E-value=0.00021 Score=57.53 Aligned_cols=90 Identities=19% Similarity=0.239 Sum_probs=64.5
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...-+ .+..|
T Consensus 104 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L------------------~r~vG 163 (275)
T 3hin_A 104 YCRVPVIAALKGAVIGGGLELACAA--HIRVAEASAYYALPEGSRGIFVGGGGSVRL------------------PRLIG 163 (275)
T ss_dssp TCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSHHHHH------------------HHHHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECchhccCCCCCccHHHHH------------------HHHhC
Confidence 4688999999999999999999999 589999999988755443322 2222111 11112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|..+.
T Consensus 164 --~~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~ 195 (275)
T 3hin_A 164 --VARMADMMLTGRVYSAAEGVVHGFSQYLIENG 195 (275)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEESSS
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCCCEEeChh
Confidence 23334455556789999999999999998764
No 53
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=97.44 E-value=0.00048 Score=54.99 Aligned_cols=89 Identities=10% Similarity=0.003 Sum_probs=63.6
Q ss_pred cCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 5 KSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 5 ~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
+.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....|.. .|...-+. +..|
T Consensus 102 ~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------~~vG-- 159 (265)
T 3qxi_A 102 AKPLIAAVEGYALAGGTELALAT--DLIVAARDSAFGIPEVKRGLVAGGGGLLRLP------------------ERIP-- 159 (265)
T ss_dssp SSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSHHHHHH------------------HHSC--
T ss_pred CCCEEEEECCceeHHHHHHHHhC--CEEEEcCCCEEECcccccCcCCcccHHHHHH------------------HHhC--
Confidence 67899999999999999999999 589999999987754443322 12221111 1122
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++++||+++||||+|..+..
T Consensus 160 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~ 192 (265)
T 3qxi_A 160 YAIAMELALTGDNLSAERAHALGMVNVLAEPGA 192 (265)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHTTSCSEEECTTC
T ss_pred HHHHHHHHHcCCCcCHHHHHHCCCccEeeChhH
Confidence 333345555567799999999999999987643
No 54
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=97.42 E-value=0.00025 Score=57.36 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=64.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-...+|.. + ..-.. .+.+..|
T Consensus 117 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~lGl~-~-~g~~~---------------~L~r~vG-- 175 (286)
T 3myb_A 117 RLPAPVIARVHGIATAAGCQLVAMC--DLAVATRDARFAVSGINVGLF-C-STPGV---------------ALSRNVG-- 175 (286)
T ss_dssp HSSSCEEEEECSCEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCC-C-HHHHH---------------HHTTTSC--
T ss_pred cCCCCEEEEECCeehHHHHHHHHhC--CEEEEcCCCEEECcccccCCC-C-chHHH---------------HHHHHcC--
Confidence 4688999999999999999999999 589999999988755443322 2 11110 1222222
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 176 ~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~ 207 (286)
T 3myb_A 176 RKAAFEMLVTGEFVSADDAKGLGLVNRVVAPK 207 (286)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCCcEecCHH
Confidence 33444555555669999999999999998754
No 55
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=97.41 E-value=0.00043 Score=57.47 Aligned_cols=91 Identities=13% Similarity=0.028 Sum_probs=64.3
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeec-ccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQ-PNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~-pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++. ++++|.+-...+|.. .|...-|....-
T Consensus 165 ~~~kPvIAaV~G~A~GgG~~Lalac--D~riAs~~~A~f~~pe~~lGl~p~~gg~~~L~r~vG----------------- 225 (334)
T 3t8b_A 165 FMPKVVICLVNGWAAGGGHSLHVVC--DLTLASREYARFKQTDADVGSFDGGYGSAYLARQVG----------------- 225 (334)
T ss_dssp HSSSEEEEEECSEEETHHHHHHHHS--SEEEEETTTCEEECCCTTCSSSSCCSCHHHHHHHHH-----------------
T ss_pred hCCCCEEEEECCccccCcchhHhhC--CEEEEeCCCcEEECcccccCCCCcccHHHHHHHHhh-----------------
Confidence 4688999999999999999999999 589999 999998865554422 223322221111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++|+||+++||||+|..+..
T Consensus 226 ---~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~ 258 (334)
T 3t8b_A 226 ---QKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAE 258 (334)
T ss_dssp ---HHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGG
T ss_pred ---HHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHH
Confidence 112233344445699999999999999988643
No 56
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=97.39 E-value=0.00019 Score=57.62 Aligned_cols=90 Identities=12% Similarity=0.021 Sum_probs=62.9
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-....|.. .|...-+.. ..|
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r------------------~vG 164 (272)
T 3qk8_A 105 NLDKPVVSAIRGPAVGAGLVVALLA--DISVASATAKIIDGHTKLGVAAGDHAAICWPL------------------LVG 164 (272)
T ss_dssp TCCSCEEEEECSEEEHHHHHHHHHS--SEEEEETTCEEECCHHHHTSCSCSSHHHHTHH------------------HHC
T ss_pred hCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECchhccCCCCCccHHHHHHH------------------HhC
Confidence 4688999999999999999999999 589999999987744332322 122221111 111
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|..+.
T Consensus 165 --~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~ 196 (272)
T 3qk8_A 165 --MAKAKYYLLTCETLSGEEAERIGLVSTCVDDD 196 (272)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCCcEeeCHh
Confidence 22233444445689999999999999998764
No 57
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=97.39 E-value=0.00051 Score=54.90 Aligned_cols=91 Identities=14% Similarity=0.130 Sum_probs=65.2
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|..- |... .+.+..|
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~------------------~L~r~vG 158 (267)
T 3r9t_A 99 FIDKPTIAAVNGTALGGGTELALAS--DLVVADERAQFGLPEVKRGLIAAAGGVF------------------RIAEQLP 158 (267)
T ss_dssp CCSSCEEEEECSEECTHHHHHHHHS--SEEEEETTCEECCGGGGTTCCCTTTHHH------------------HHHHHSC
T ss_pred hCCCCEEEEECCEEEhHHHHHHHhC--CEEEEcCCCEEECcccccCCCCCccHHH------------------HHHHHcC
Confidence 4688999999999999999999999 5899999998877544433221 2111 1122222
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++++||+++||||+|..+..
T Consensus 159 --~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~~~~ 191 (267)
T 3r9t_A 159 --RKVAMRLLLTGEPLSAAAARDWGLINEVVEAGS 191 (267)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSSSEEECTTC
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEEcChhH
Confidence 234445555667899999999999999987653
No 58
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=97.38 E-value=0.00021 Score=58.06 Aligned_cols=90 Identities=18% Similarity=0.160 Sum_probs=64.1
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-...+|.. .|...- +.+..|
T Consensus 117 ~~~kPvIAaV~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~lGl~p~~g~~~~------------------L~r~vG 176 (291)
T 2fbm_A 117 QFKKPIVVSVNGPAIGLGASILPLC--DLVWANEKAWFQTPYTTFGQSPDGCSSIT------------------FPKMMG 176 (291)
T ss_dssp HCCSCEEEEECSCEETHHHHTGGGS--SEEEEETTCEEECCHHHHTCCCCTTHHHH------------------HHHHHC
T ss_pred hCCCCEEEEECCeeecHHHHHHHhC--CEEEEeCCCEEECcHHhcCCCCcccHHHH------------------HHHHHh
Confidence 4688999999999999999999999 589999999887744332221 121111 111122
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|.++.
T Consensus 177 --~~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~ 208 (291)
T 2fbm_A 177 --KASANEMLIAGRKLTAREACAKGLVSQVFLTG 208 (291)
T ss_dssp --HHHHHHHHTSCCEEEHHHHHHTTSCSEEECST
T ss_pred --HHHHHHHHHcCCccCHHHHHHCCCcceecChh
Confidence 23445566666779999999999999998754
No 59
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=97.37 E-value=0.00026 Score=57.62 Aligned_cols=92 Identities=14% Similarity=0.057 Sum_probs=63.9
Q ss_pred ccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 2 AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGR--SSGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 2 ~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~--~~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
..++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....|. ..|...- +.+..
T Consensus 127 ~~~~kPvIAaV~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~------------------L~r~v 186 (298)
T 3qre_A 127 TMLRKPVIAAINGPCVGIGLTQALMC--DVRFAAAGAKFAAVFARRGLIAEFGISWI------------------LPRLT 186 (298)
T ss_dssp GGSSSCEEEEECSCEETHHHHHHHHS--SEEEEETTCEEECCCCHHHHHCTTSHHHH------------------HHHHS
T ss_pred HhCCCCEEEEECCceeecchHHHhhC--CEEEEcCCCEEECcccccCCCcchhHHHH------------------HHHhc
Confidence 35689999999999999999999999 58999999988763322111 1121111 11222
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
| ...-.+++-....++|+||+++||||+|..+..
T Consensus 187 G--~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~ 220 (298)
T 3qre_A 187 S--WAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQ 220 (298)
T ss_dssp C--HHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHH
Confidence 2 233445555556899999999999999987653
No 60
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=97.37 E-value=0.00041 Score=55.36 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=63.2
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....|.. .|...-+. +..|
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~------------------r~vG 158 (262)
T 3r9q_A 99 RLSKPVIAAISGHAVAGGIELALWC--DLRVVEEDAVLGVFCRRWGVPLIDGGTIRLP------------------RLIG 158 (262)
T ss_dssp CCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECTHHHHTCCCCSSHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECCeeehhhhHHHHhC--CEEEEeCCCEEecchhccCCCCCccHHHHHH------------------HHhC
Confidence 4688999999999999999999999 589999999887633222221 12222111 1111
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++++||+++||||+|.++..
T Consensus 159 --~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~ 191 (262)
T 3r9q_A 159 --HSRAMDLILTGRPVHANEALDIGLVNRVVARGQ 191 (262)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSCSEEECTTC
T ss_pred --HHHHHHHHHcCCcCCHHHHHHcCCccEecChhH
Confidence 223344454556899999999999999997653
No 61
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=97.37 E-value=0.00018 Score=57.38 Aligned_cols=90 Identities=12% Similarity=0.006 Sum_probs=62.7
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...-+ .+..|
T Consensus 102 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~r~vG 161 (264)
T 1wz8_A 102 NFPRPVVAAVEKVAVGAGLALALAA--DIAVVGKGTRLLDGHLRLGVAAGDHAVLLW------------------PLLVG 161 (264)
T ss_dssp HSSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTSCCTTTHHHHT------------------HHHHC
T ss_pred cCCCCEEEEECCeeechhHHHHHhC--CEEEecCCCEEeCchhhcCcCCCccHHHHH------------------HHHhC
Confidence 4688999999999999999999999 589999999887744332221 1211111 11122
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 162 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 193 (264)
T 1wz8_A 162 --MAKAKYHLLLNEPLTGEEAERLGLVALAVEDE 193 (264)
T ss_dssp --HHHHHHHHHHTCCEEHHHHHHHTSSSEEECGG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCceeecChh
Confidence 22334445455679999999999999998653
No 62
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=97.36 E-value=0.00035 Score=55.57 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=64.4
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-...+|-.- |...-+. +..|
T Consensus 93 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~vG 152 (258)
T 4fzw_A 93 AFNKPLIAAVNGYALGAGCELALLC--DVVVAGENARFGLPEITLGIMPGAGGTQRLI------------------RSVG 152 (258)
T ss_dssp TCCSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCSSHHHHHH------------------HHHC
T ss_pred HCCCCEEEEEcCcceeeeeEeeccc--ceEEECCCCEEECcccCCCcCCCchHHHHHH------------------HHhC
Confidence 4688999999999999999999999 5899999999877544433221 2111111 1112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++++||+++||||+|..+..
T Consensus 153 --~~~A~~llltg~~i~a~eA~~~GLv~~vv~~~~ 185 (258)
T 4fzw_A 153 --KSLASKMVLSGESITAQQAQQAGLVSDVFPSDL 185 (258)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECTTT
T ss_pred --HHHHHHHHHcCCcCcHHHHHHCCCeeEEeCchH
Confidence 223344455567899999999999999988653
No 63
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=97.36 E-value=0.00016 Score=57.13 Aligned_cols=89 Identities=15% Similarity=0.148 Sum_probs=61.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...- +.+..|
T Consensus 88 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~------------------l~~~vG 147 (243)
T 2q35_A 88 DCEIPIIAAMQGHSFGGGLLLGLYA--DFVVFSQESVYATNFMKYGFTPVGATSLI------------------LREKLG 147 (243)
T ss_dssp TCCSCEEEEECSEEETHHHHHHHTS--SEEEEESSSEEECCHHHHTSCCCSSHHHH------------------HHHHHC
T ss_pred hCCCCEEEEEcCccccchHHHHHhC--CEEEEeCCCEEECCccccCCCCcchHHHH------------------HHHHhC
Confidence 4688999999999999999999999 589999999887643332211 121111 111222
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
...-.+++-....++++||+++||||+|.++
T Consensus 148 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 178 (243)
T 2q35_A 148 --SELAQEMIYTGENYRGKELAERGIPFPVVSR 178 (243)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTCSSCEECH
T ss_pred --HHHHHHHHHcCCCCCHHHHHHcCCCCEecCh
Confidence 2233444444567999999999999999865
No 64
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=97.36 E-value=0.00011 Score=58.59 Aligned_cols=88 Identities=18% Similarity=0.142 Sum_probs=62.4
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...-+. +..|
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~------------------~~vG 158 (263)
T 3lke_A 99 TSPKVTVALINGYAYGGGFNMMLAC--DRRIALRRAKFLENFHKMGISPDLGASYFLP------------------RIIG 158 (263)
T ss_dssp TCSSEEEEEECSEEETHHHHGGGGS--SEEEEETTCEEECCHHHHTCCCCTTHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECCEeeHHHHHHHHHC--CEEEEcCCCEEeCchHhhCCCCCccHHHHHH------------------HHhC
Confidence 4688999999999999999999999 589999999987644332322 12221111 1112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeec
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~ 112 (148)
...-.+++-....++|+||+++||||+|.+
T Consensus 159 --~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~ 188 (263)
T 3lke_A 159 --YEQTMNLLLEGKLFTSEEALRLGLIQEICE 188 (263)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSSSEEES
T ss_pred --HHHHHHHHHhCCCcCHHHHHHcCCCcEecC
Confidence 233344554556899999999999999987
No 65
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=97.34 E-value=0.00056 Score=54.64 Aligned_cols=88 Identities=18% Similarity=0.194 Sum_probs=62.3
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-...+|..- |...-+. +..|
T Consensus 97 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~------------------r~vG 156 (266)
T 3fdu_A 97 RLSKPLIIAVKGVAIGIGVTILLQA--DLVFADNTALFQIPFVSLGLSPEGGASQLLV------------------KQAG 156 (266)
T ss_dssp HCCSCEEEEECSEEETHHHHGGGGC--SEEEECTTCEEECCTTTTTCCCCTTHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECCEEehHHHHHHHhC--CEEEEcCCCEEECchhhhCCCCcchHHHHHH------------------HHhC
Confidence 4688999999999999999999999 5899999999887554433222 2221111 1112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeec
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 112 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~ 112 (148)
...-.+++-....++++||+++||||+|.+
T Consensus 157 --~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~ 186 (266)
T 3fdu_A 157 --YHKAAELLFTAKKFNAETALQAGLVNEIVE 186 (266)
T ss_dssp --HHHHHHHHHHCCEECHHHHHHTTSCSEECS
T ss_pred --HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH
Confidence 222344444456699999999999999987
No 66
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=97.33 E-value=0.00033 Score=55.86 Aligned_cols=91 Identities=15% Similarity=0.136 Sum_probs=64.5
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. + .--. . .+.+..|
T Consensus 102 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~-~-~g~~----~-----------~l~r~vG-- 160 (263)
T 3l3s_A 102 HCPKPTIALVEGIATAAGLQLMAAC--DLAYASPAARFCLPGVQNGGF-C-TTPA----V-----------AVSRVIG-- 160 (263)
T ss_dssp TCSSCEEEEESSEEETHHHHHHHHS--SEEEECTTCEEECCTTTTTSC-C-HHHH----H-----------HHHTTSC--
T ss_pred hCCCCEEEEECCEEEHHHHHHHHHC--CEEEecCCCEEeCchhccCCC-C-ccHH----H-----------HHHHHcC--
Confidence 4688999999999999999999999 589999999887744443322 2 1111 0 1222223
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|.++.
T Consensus 161 ~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~ 192 (263)
T 3l3s_A 161 RRAVTEMALTGATYDADWALAAGLINRILPEA 192 (263)
T ss_dssp HHHHHHHHHHCCEEEHHHHHHHTSSSEECCHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeCHH
Confidence 33445555556679999999999999998753
No 67
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=97.33 E-value=0.00039 Score=56.12 Aligned_cols=90 Identities=17% Similarity=0.209 Sum_probs=63.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|..- |...-+. +..|
T Consensus 113 ~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~lGl~p~~g~~~~L~------------------r~vG 172 (277)
T 4di1_A 113 AIPKPTVAAVTGYALGAGLTLALAA--DWRVSGDNVKFGATEILAGLIPGGGGMGRLT------------------RVVG 172 (277)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCTTHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECCeEehhHHHHHHhC--CEEEEcCCCEEECcccccCCCCCchHHHHHH------------------HHhC
Confidence 4688999999999999999999999 5899999999887544433221 2121111 1112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|..+.
T Consensus 173 --~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~ 204 (277)
T 4di1_A 173 --SSRAKELVFSGRFFDAEEALALGLIDDMVAPD 204 (277)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEEeChh
Confidence 22334445556689999999999999998754
No 68
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=97.29 E-value=0.00034 Score=56.74 Aligned_cols=89 Identities=19% Similarity=0.196 Sum_probs=62.0
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGR---SSGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~---~~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-.+.+|. ..| ..-+. +..
T Consensus 121 ~~~kPvIAaV~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~~~~~g-~~~L~------------------r~v 179 (289)
T 3t89_A 121 TCPKPVVAMVAGYSIGGGHVLHMMC--DLTIAADNAIFGQTGPKVGSFDGGWG-ASYMA------------------RIV 179 (289)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTCCCCSTT-THHHH------------------HHH
T ss_pred cCCCCEEEEECCEeehHHHHHHHhC--CEEEEeCCCEEeccccccCCCCCchH-HHHHH------------------Hhc
Confidence 4688999999999999999999999 58999999998774333231 123 22121 111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++++||+++||||+|..+.
T Consensus 180 G--~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~ 212 (289)
T 3t89_A 180 G--QKKAREIWFLCRQYDAKQALDMGLVNTVVPLA 212 (289)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGG
T ss_pred C--HHHHHHHHHcCCcccHHHHHHCCCceEeeCHH
Confidence 1 22233344344569999999999999998754
No 69
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=97.29 E-value=0.00063 Score=54.45 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=63.1
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+-....|..-+-... .|- +..|
T Consensus 97 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~------~l~-----------~~vG-- 155 (268)
T 3i47_A 97 QSPKPTIAMVQGAAFGGGAGLAAAC--DIAIASTSARFCFSEVKLGLIPAVISP------YVV-----------RAIG-- 155 (268)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCTTTHH------HHH-----------HHHC--
T ss_pred hCCCCEEEEECCEEEhHhHHHHHhC--CEEEEcCCCEEECcccccCCCcccHHH------HHH-----------HHhC--
Confidence 4688999999999999999999999 589999999987644333322111100 011 1111
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 156 ~~~A~~llltg~~i~A~eA~~~GLV~~vv~~~ 187 (268)
T 3i47_A 156 ERAAKMLFMSAEVFDATRAYSLNLVQHCVPDD 187 (268)
T ss_dssp HHHHHHHHHHCCEEEHHHHHHTTSCSEEECGG
T ss_pred HHHHHHHHHcCCccCHHHHHHcCCCcEeeChh
Confidence 22334555556689999999999999998864
No 70
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=97.29 E-value=0.00027 Score=56.41 Aligned_cols=90 Identities=13% Similarity=0.113 Sum_probs=61.3
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-....|.. .|...-+... .|
T Consensus 98 ~~~kPvIAav~G~a~GgG~~lal~c--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~------------------vG 157 (269)
T 1nzy_A 98 RVKRPVLAAINGVAAGGGLGISLAS--DMAICADSAKFVCAWHTIGIGNDTATSYSLARI------------------VG 157 (269)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTCCCCTTHHHHHHHH------------------HH
T ss_pred hCCCCEEEEECCeeecHHHHHHHhC--CEEEecCCCEEeCcccccCCCCCccHHHHHHHH------------------hh
Confidence 4688999999999999999999999 589999999887744332221 1222211111 11
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 158 --~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 189 (269)
T 1nzy_A 158 --MRRAMELMLTNRTLYPEEAKDWGLVSRVYPKD 189 (269)
T ss_dssp --HHHHHHHHHHCCCBCHHHHHHHTSCSCEECHH
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHH
Confidence 11223334445569999999999999998653
No 71
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=97.23 E-value=0.00022 Score=56.68 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=62.3
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....|..-+ ..-. ..+.+..|
T Consensus 94 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~-~g~~---------------~~l~r~vG-- 153 (261)
T 1ef8_A 94 KFPKPIISMVEGSVWGGAFEMIMSS--DLIIAASTSTFSMTPVNLGVPYN-LVGI---------------HNLTRDAG-- 153 (261)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTCCCC-HHHH---------------HTTSSSSC--
T ss_pred hCCCCEEEEECCEEEeHhHHHHHhC--CEEEecCCCEEeCchhccCCCCC-ccHH---------------HHHHHHhC--
Confidence 4688999999999999999999999 58999999988763332221111 1000 01222233
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
...-.+++-....++++||+++||||+|..+
T Consensus 154 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 184 (261)
T 1ef8_A 154 FHIVKELIFTASPITAQRALAVGILNHVVEV 184 (261)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHTTSCSEEECH
T ss_pred HHHHHHHHHcCCccCHHHHHHCCCcccccCH
Confidence 3334455555568999999999999999864
No 72
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=97.22 E-value=0.00041 Score=55.68 Aligned_cols=90 Identities=13% Similarity=0.028 Sum_probs=63.4
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeec-ccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQ-PNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~-pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++. ++++|-+-...+|-. .|...- +.+..
T Consensus 110 ~~~kPvIAav~G~a~GgG~~Lalac--D~~ia~~~~a~f~~pe~~lGl~p~~g~~~~------------------l~r~v 169 (280)
T 1pjh_A 110 KHSKVLICCLNGPAIGLSAALVALC--DIVYSINDKVYLLYPFANLGLITEGGTTVS------------------LPLKF 169 (280)
T ss_dssp HCCSEEEEEECSCEEHHHHHHHHHS--SEEEESSTTCEEECCHHHHTCCCCTTHHHH------------------HHHHH
T ss_pred hCCCCEEEEECCeeeeHHHHHHHHC--CEEEEeCCCCEEeCchhhcCCCCCccHHHH------------------HHHHh
Confidence 4688999999999999999999999 589999 999887643332221 121111 11222
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++++||+++||||+|..+.
T Consensus 170 G--~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~ 202 (280)
T 1pjh_A 170 G--TNTTYECLMFNKPFKYDIMCENGFISKNFNMP 202 (280)
T ss_dssp C--HHHHHHHHHTTCCEEHHHHHHTTCCSEECCCC
T ss_pred C--HHHHHHHHHhCCCCCHHHHHHCCCcceeeCCc
Confidence 2 23344555556679999999999999998764
No 73
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=97.22 E-value=0.00031 Score=56.51 Aligned_cols=89 Identities=19% Similarity=0.144 Sum_probs=61.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGR---SSGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~---~~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-.+.+|. ..| ..-+.. ..
T Consensus 107 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~~g-~~~L~r------------------~v 165 (275)
T 4eml_A 107 SMPKVVIALVAGYAIGGGHVLHLVC--DLTIAADNAIFGQTGPKVGSFDGGFG-SSYLAR------------------IV 165 (275)
T ss_dssp HSSSEEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTCCCCSTT-THHHHH------------------HH
T ss_pred hCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECcccccCCCCCccH-HHHHHH------------------Hh
Confidence 4688999999999999999999999 58999999998773332221 122 212211 11
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++|+||+++||||+|..+.
T Consensus 166 G--~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~ 198 (275)
T 4eml_A 166 G--QKKAREIWYLCRQYSAQEAERMGMVNTVVPVD 198 (275)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred H--HHHHHHHHHhCCCcCHHHHHHcCCccEeeCHH
Confidence 1 12223444444569999999999999998764
No 74
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=97.21 E-value=0.00042 Score=55.18 Aligned_cols=88 Identities=11% Similarity=0.038 Sum_probs=60.0
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeee-ecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKL-YLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMI-H~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+ |.-|.+++ +.|++.++++|.+ -....|.. .|...- +.+..
T Consensus 106 ~~~kPvIAav~G~a~G-G~~Lalac--D~ria~~~a~f~~~pe~~lGl~p~~g~~~~------------------l~r~v 164 (257)
T 1szo_A 106 SIEVPVIAAVNGPVTN-APEIPVMS--DIVLAAESATFQDGPHFPSGIVPGDGAHVV------------------WPHVL 164 (257)
T ss_dssp HCCSCEEEEECSCBCS-STHHHHTS--SEEEEETTCEEECTTSGGGTCCCTTTHHHH------------------HHHHH
T ss_pred cCCCcEEEEECCchHH-HHHHHHHC--CEEEEeCCCEEecCcccccccCCCccHHHH------------------HHHHc
Confidence 4678999999999995 88788888 5899999999876 33332322 121111 11122
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
| ...-.+++-....++++||+++||||+|.++
T Consensus 165 G--~~~A~~llltG~~~~A~eA~~~GLv~~vv~~ 196 (257)
T 1szo_A 165 G--SNRGRYFLLTGQELDARTALDYGAVNEVLSE 196 (257)
T ss_dssp C--HHHHHHHHHTTCEEEHHHHHHHTSCSEEECH
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCceEEeCh
Confidence 2 2334455656677999999999999999864
No 75
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=97.20 E-value=0.0005 Score=55.68 Aligned_cols=90 Identities=12% Similarity=0.144 Sum_probs=63.1
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecc-cCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQP-NSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~p-na~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.+ +++|-+-....|.. .|...-+. +..
T Consensus 104 ~~~kPvIAaV~G~a~GgG~~lalac--D~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~------------------r~v 163 (287)
T 3gkb_A 104 HQPQVTIVKLAGKARGGGAEFVAAA--DMAFAAAETAGLGQIEALMGIIPGGGGTQYLR------------------GRV 163 (287)
T ss_dssp HCSSEEEEEECSEEETHHHHHHHHS--SEEEEETTTCEEECGGGGGTSCCCSSHHHHHH------------------HHH
T ss_pred hCCCCEEEEECCeeehHHHHHHHHC--CEEEEeCCCcEEECcccccCCCCCchHHHHHH------------------HHh
Confidence 4688999999999999999999999 5899999 99988754443322 12222111 111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++|+||+++||||+|..+.
T Consensus 164 G--~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~ 196 (287)
T 3gkb_A 164 G--RNRALEVVLTADLFDAETAASYGWINRALPAD 196 (287)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECHH
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCCcEEeChh
Confidence 2 22234445455679999999999999998753
No 76
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=97.19 E-value=0.00066 Score=54.07 Aligned_cols=86 Identities=17% Similarity=0.068 Sum_probs=61.2
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGP-VTDMWRKAKDLEANAESYIELLAKGTGK 81 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~-~~dl~~~a~~l~~~~~~l~~iya~~Tg~ 81 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-....|..-+- ... .+. + +
T Consensus 106 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~-----------------~l~-~--v 163 (267)
T 3oc7_A 106 ESRLPVIAAIDGHVRAGGFGLVGAC--DIAVAGPRSSFALTEARIGVAPAIISLT-----------------LLP-K--L 163 (267)
T ss_dssp HCSSCEEEEECSEEETTHHHHHHHS--SEEEECTTCEEECCGGGGTCCCTTTHHH-----------------HTT-T--S
T ss_pred hCCCCEEEEEcCeecccchHHHHHC--CEEEEcCCCEEeCcccccCCCcchhHHH-----------------HHH-H--h
Confidence 4688999999999999999999999 589999999987644333321111 110 111 2 2
Q ss_pred CHHHHHHhhcCCCcccHHHHHHcCCceee
Q 032040 82 PKEEIAKDIQRPKYMQAKEAIVYGLADKI 110 (148)
Q Consensus 82 ~~e~i~~~m~rd~~lta~EA~eyGlID~I 110 (148)
....-.+++-....++++||+++||||+|
T Consensus 164 G~~~A~~l~ltg~~~~a~eA~~~GLv~~v 192 (267)
T 3oc7_A 164 SARAAARYYLTGEKFDARRAEEIGLITMA 192 (267)
T ss_dssp CHHHHHHHHHHCCCBCHHHHHHHTSSSEE
T ss_pred CHHHHHHHHHcCCccCHHHHHHCCChhhh
Confidence 23344555555668999999999999999
No 77
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=97.18 E-value=0.00086 Score=54.66 Aligned_cols=90 Identities=11% Similarity=0.061 Sum_probs=63.6
Q ss_pred ccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTGK 81 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~ 81 (148)
++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-...+|.. .|... .+.+..|
T Consensus 139 ~~kPvIAaV~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~------------------~L~r~vG- 197 (305)
T 3m6n_A 139 ARAHSIALVQGNALGGGFEAALSC--HTIIAEEGVMMGLPEVLFDLFPGMGAYS------------------FMCQRIS- 197 (305)
T ss_dssp TTCEEEEEECSCEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSHHH------------------HHTTTSC-
T ss_pred CCCCEEEEECCEeehHHHHHHHhC--CEEEEcCCCEEECchhccCcCCCccHHH------------------HHHHHhc-
Confidence 588999999999999999999999 589999999988744433322 12111 1122222
Q ss_pred CHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 82 PKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 82 ~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
...-.+++-....++|+||+++||||+|..+..
T Consensus 198 -~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~ 230 (305)
T 3m6n_A 198 -AHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQ 230 (305)
T ss_dssp -HHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTC
T ss_pred -HHHHHHHHHcCCCCCHHHHHHCCCCCEecChhH
Confidence 233344444556899999999999999987643
No 78
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=97.10 E-value=0.00045 Score=55.45 Aligned_cols=90 Identities=17% Similarity=0.112 Sum_probs=61.5
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|.+-....|..-+ .--. ..+.+..|
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~-~g~~---------------~~L~r~vG-- 164 (264)
T 3he2_A 105 ASPMPVVGAINGPAIGAGLQLAMQC--DLRVVAPDAFFQFPTSKYGLALD-NWSI---------------RRLSSLVG-- 164 (264)
T ss_dssp HCSSCEEEEECSCEETHHHHHHHHS--SEEEECTTCEEECTHHHHTCCCC-HHHH---------------HHHHHHHC--
T ss_pred hCCCCEEEEECCcEEcchhHHHHhC--CEEEEcCCCEEECcccccCcCCc-chHH---------------HHHHHHhC--
Confidence 4688999999999999999999999 58999999987763333222111 1011 01111222
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeec
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIID 112 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~ 112 (148)
...-.+++-....++++||+++||||+|.+
T Consensus 165 ~~~A~~llltG~~i~A~eA~~~GLV~~v~~ 194 (264)
T 3he2_A 165 HGRARAMLLSAEKLTAEIALHTGMANRIGT 194 (264)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEECC
T ss_pred HHHHHHHHHcCCCccHHHHHHCCCeEEEec
Confidence 223345555567899999999999999964
No 79
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=97.05 E-value=0.00049 Score=55.77 Aligned_cols=90 Identities=13% Similarity=0.113 Sum_probs=61.9
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeeccc-CeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN-SSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pn-a~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++ ++|-+-....|.. .|...-+. +..
T Consensus 101 ~~~kPvIAaV~G~a~GgG~~Lalac--D~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~------------------r~v 160 (289)
T 3h0u_A 101 QLPAVTIAKLRGRARGAGSEFLLAC--DMRFASRENAILGQPEVGIGAPPGAGAIQHLT------------------RLL 160 (289)
T ss_dssp TCSSEEEEEECSEEETHHHHHHHHS--SEEEEETTTCEEECTHHHHTSCCCSSHHHHHH------------------HHH
T ss_pred hCCCCEEEEECCEeehhhHHHHHhC--CEEEEeCCCcEEeCchhhcCCCCCccHHHHHH------------------HHh
Confidence 4688999999999999999999999 58999998 9887633222221 12222211 111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++|+||+++||||+|.++.
T Consensus 161 G--~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~ 193 (289)
T 3h0u_A 161 G--RGRALEAVLTSSDFDADLAERYGWVNRAVPDA 193 (289)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECHH
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCccEecCHH
Confidence 1 22333444445569999999999999998753
No 80
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=97.04 E-value=0.00038 Score=55.98 Aligned_cols=88 Identities=8% Similarity=-0.019 Sum_probs=61.4
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+-....|.. .|... - . ..|
T Consensus 115 ~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~~~~~~~~-~----~---------------~vG 172 (279)
T 3t3w_A 115 NVPKPSIAAVQGRCISGGLLLCWPC--DLIIAAEDALFSDPVVLMDIGGVEYHGH-T----W---------------ELG 172 (279)
T ss_dssp HCSSCEEEEECSEEEGGGHHHHTTS--SEEEEETTCEEECCGGGGTCSSCSSCCH-H----H---------------HHC
T ss_pred hCCCCEEEEECCeEhHHHHHHHHhC--CEEEecCCCEEeCcHHhcCCCCchHHHH-H----h---------------hcC
Confidence 4688999999999999999999999 589999999987644332321 11110 0 0 111
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++++||+++||||+|.++.
T Consensus 173 --~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~ 204 (279)
T 3t3w_A 173 --PRKAKEILFTGRAMTAEEVAQTGMVNRVVPRD 204 (279)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred --HHHHHHHHHcCCccCHHHHHHCCCCcEeeChH
Confidence 22233444445589999999999999998754
No 81
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=97.03 E-value=0.00049 Score=55.15 Aligned_cols=90 Identities=16% Similarity=0.033 Sum_probs=62.7
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....|..-+-... .|- +..|
T Consensus 98 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~------~l~-----------r~vG-- 156 (267)
T 3hp0_A 98 TGPYVTISHVRGKVNAGGLGFVSAT--DIAIADQTASFSLSELLFGLYPACVLP------FLI-----------RRIG-- 156 (267)
T ss_dssp HSSSEEEEEECSEEETTHHHHHHHS--SEEEECTTCEEECCGGGGTCCCTTTHH------HHH-----------HHHC--
T ss_pred cCCCCEEEEECCEEeehHHHHHHhC--CEEEEcCCCEEECchhccCcCchhHHH------HHH-----------HHhC--
Confidence 4688999999999999999999999 589999999988754443322111110 111 1112
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
...-.+++-....++|+||+++||||+|.++
T Consensus 157 ~~~A~ellltg~~i~A~eA~~~GLV~~vv~~ 187 (267)
T 3hp0_A 157 RQKAHYMTLMTKPISVQEASEWGLIDAFDAE 187 (267)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTSSSCBCSC
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCcceecCC
Confidence 2333444445568999999999999999865
No 82
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=96.92 E-value=0.0011 Score=53.35 Aligned_cols=87 Identities=17% Similarity=0.117 Sum_probs=61.9
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|++++ +.|++.++++|-+-....|.. .|...- +.+..|
T Consensus 120 ~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~------------------L~r~vG 179 (276)
T 3rrv_A 120 RCRIPVVAAVNGPAVGLGCSLVALS--DIVYIAENAYLADPHVQVGLVAADGGPLT------------------WPLHIS 179 (276)
T ss_dssp HCSSCEEEEECSCEETHHHHHHHTS--SEEEEETTCEEECCHHHHTCCCCSSHHHH------------------GGGTSC
T ss_pred hCCCCEEEEECceeeHHHHHHHHHC--CEEEEeCCCEEECchhccCcCCCccHHHH------------------HHHHhC
Confidence 4688999999999999999999999 589999999887633222211 122211 112222
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeee
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKII 111 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii 111 (148)
...-.+++-....++|+||+++||||+|.
T Consensus 180 --~~~A~ellltG~~i~A~eA~~~GLv~~vv 208 (276)
T 3rrv_A 180 --LLLAKEYALTGTRISAQRAVELGLANHVA 208 (276)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEE
T ss_pred --HHHHHHHHHcCCCCCHHHHHHcCCHHHHH
Confidence 33444555556789999999999999998
No 83
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=96.92 E-value=0.00095 Score=55.72 Aligned_cols=89 Identities=16% Similarity=0.137 Sum_probs=63.3
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-...+|.. .|...-+ .+..|
T Consensus 100 ~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L------------------~r~~g 159 (363)
T 3bpt_A 100 SCQKPYVALIHGITMGGGVGLSVHG--QFRVATEKCLFAMPETAIGLFPDVGGGYFL------------------PRLQG 159 (363)
T ss_dssp TCSSCEEEEECSEEETHHHHTTTTS--SEEEECTTCEEECCGGGTTSCCCTTHHHHH------------------HHSST
T ss_pred hCCCCEEEEECCEEehHHHHHHHhC--CEEEEcCCeEEeCCccccCCCCCchHHHHH------------------HHhhH
Confidence 4688999999999999999999999 589999999988755443322 1211111 11223
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
. .-.+++-....++++||+++||||+|..+.
T Consensus 160 ~---~a~~l~ltg~~i~A~eA~~~GLv~~vv~~~ 190 (363)
T 3bpt_A 160 K---LGYFLALTGFRLKGRDVYRAGIATHFVDSE 190 (363)
T ss_dssp T---HHHHHHHHCCCEETHHHHHTTSCSEECCGG
T ss_pred H---HHHHHHHcCCCCCHHHHHHCCCcceecCHH
Confidence 2 223344455679999999999999998654
No 84
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=96.75 E-value=0.00094 Score=53.41 Aligned_cols=89 Identities=10% Similarity=-0.067 Sum_probs=58.6
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeee-ecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKL-YLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMI-H~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.++.||.+.+-|.|. .|.-|.+++ +.|++.++++|.+ -....|.. .|...-+. + ..
T Consensus 115 ~~~kPvIAav~G~a~-GG~~Lalac--D~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~----------r--------~v 173 (263)
T 2j5g_A 115 DIEVPVISAVNGAAL-LHSEYILTT--DIILASENTVFQDMPHLNAGIVPGDGVHILWP----------L--------AL 173 (263)
T ss_dssp TCCSCEEEEECSEEC-SCGGGGGGC--SEEEEETTCEECCCHHHHHTCCCCSSHHHHHH----------H--------HH
T ss_pred hCCCCEEEEECCcch-HHHHHHHhC--CEEEEcCCCEEecCcccccccCCCccHHHHHH----------H--------Hc
Confidence 468899999999999 477788888 5899999998866 22221211 12121111 1 11
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++++||+++||||+|.++.
T Consensus 174 G--~~~A~~llltG~~~~A~eA~~~GLv~~vv~~~ 206 (263)
T 2j5g_A 174 G--LYRGRYFLFTQEKLTAQQAYELNVVHEVLPQS 206 (263)
T ss_dssp H--HHHHHHHHHTTCCEEHHHHHHTTSCSEEECGG
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCccEecChH
Confidence 1 12334455556679999999999999998653
No 85
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=96.73 E-value=0.0024 Score=53.17 Aligned_cols=89 Identities=16% Similarity=0.142 Sum_probs=60.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|.+-...+|.. .|...- | .+--|
T Consensus 103 ~~~kPvIAav~G~a~GgG~~lal~c--D~ria~~~a~f~~pe~~iGl~p~~g~~~~-------l-----------~rl~g 162 (353)
T 4hdt_A 103 RYPKPYVSIMDGIVMGGGVGVGAHG--NVRVVTDTTKMAMPEVGIGFIPDVGGTYL-------L-----------SRAPG 162 (353)
T ss_dssp HCSSCEEEEECBEEETHHHHHHTTS--SEEEECTTCEEECCGGGGTCCCCTTHHHH-------H-----------HTSST
T ss_pred HCCCCEEEEeECceeecCccccCCc--CeeccchhccccCcccccccCCCccceeh-------h-----------hhhhh
Confidence 4688999999999999999999999 589999999988744333322 121111 1 11112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
. .-.+++--...++++||+++||||+|+.+.
T Consensus 163 -~--~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~ 193 (353)
T 4hdt_A 163 -K--LGLHAALTGAPFSGADAIVMGFADHYVPHD 193 (353)
T ss_dssp -T--HHHHHHHHCCCBCHHHHHHHTSCSEECCGG
T ss_pred -H--HHHHHHhcCCCCCHHHHHHcCCCcEEeCHH
Confidence 1 112222234568999999999999998764
No 86
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=96.58 E-value=0.0042 Score=56.10 Aligned_cols=90 Identities=14% Similarity=0.133 Sum_probs=63.2
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-...+|-. .|...-+- +..|
T Consensus 101 ~~~kPvIAav~G~a~GgG~elalac--D~ria~~~a~fglpev~lGl~P~~ggt~~L~------------------r~vG 160 (715)
T 1wdk_A 101 DLNVPTVAAINGIALGGGLEMCLAA--DFRVMADSAKIGLPEVKLGIYPGFGGTVRLP------------------RLIG 160 (715)
T ss_dssp TCSSCEEEEECSCEETHHHHHHHTS--SEEEEETTCEEECGGGGGTCCCCSSHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECCEeeHHHHHHHHHC--CEEEEeCCCEEeChhhccCCCCCccHHHHHH------------------HHhC
Confidence 4688999999999999999999999 589999999977744433322 22222111 1112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|..+.
T Consensus 161 --~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~ 192 (715)
T 1wdk_A 161 --VDNAVEWIASGKENRAEDALKVSAVDAVVTAD 192 (715)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHTTSSSEEECGG
T ss_pred --HHHHHHHHHcCCCCCHHHHHHCCCceEEeChH
Confidence 22333444455689999999999999998643
No 87
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=96.57 E-value=0.005 Score=53.01 Aligned_cols=90 Identities=20% Similarity=0.118 Sum_probs=62.5
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 82 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~ 82 (148)
.++.||...+-|.|.+.|.-|++++ +.|++.++++|.+-...+|..-|-.. . .|-+ ..|
T Consensus 282 ~~pkPvIAAVnG~A~GGG~eLALaC--DirIAae~A~Fglpev~lGl~P~~g~-~-----~L~r-----------lvG-- 340 (440)
T 2np9_A 282 RIEKPWVAAVDGFAIGGGAQLLLVF--DRVLASSDAYFSLPAAKEGIIPGAAN-L-----RLGR-----------FAG-- 340 (440)
T ss_dssp EECCCEEEEECSEEETHHHHHGGGC--SEEEEETTCEEECCCTTTCCCCTTHH-H-----HHHH-----------HHH--
T ss_pred cCCCCEEEEECCcccccchHHHhhC--CEEEEcCCCEEECchhccCcCcchHH-H-----HHHH-----------Hhh--
Confidence 4789999999999999999999999 58999999998885554332222111 0 1111 111
Q ss_pred HHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 83 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 83 ~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
...-.+++-....++++||+++||||+|..+
T Consensus 341 ~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~ 371 (440)
T 2np9_A 341 PRVSRQVILEGRRIWAKEPEARLLVDEVVEP 371 (440)
T ss_dssp HHHHHHHHHHCCCEETTSGGGGGTCSEEECH
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCCcEecCh
Confidence 1122333444557999999999999999864
No 88
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=96.55 E-value=0.0018 Score=55.08 Aligned_cols=89 Identities=18% Similarity=0.125 Sum_probs=63.5
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~~--G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-...+|..- |... .+.+..|
T Consensus 140 ~~~kPvIAaVnG~a~GgG~~Lalac--D~ria~~~a~f~~pe~~lGl~P~~G~t~------------------~L~rl~g 199 (407)
T 3ju1_A 140 TYGKPVLVWGDGIVMGGGLGLMAGA--SHKVVTETSRIAMPEVTIGLYPDVGGSY------------------FLNRMPG 199 (407)
T ss_dssp TCSSCEEEECCSEEETHHHHHHHHC--SEEEECTTCEEECGGGGGTCCSCTTHHH------------------HTTTSST
T ss_pred HCCCCEEEEECCccccCcchHHhcC--CEEEEcCCCEEeChHhhcCCCCCchHHH------------------HHhhhhH
Confidence 4688999999999999999999999 5899999999887544433221 2111 1122223
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
..-.+++-....++|+||+++||||+|+.+.
T Consensus 200 ---~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~ 230 (407)
T 3ju1_A 200 ---KMGLFLGLTAYHMNAADACYVGLADHYLNRD 230 (407)
T ss_dssp ---THHHHHHHHCCCBCHHHHHHHTSCSEECCGG
T ss_pred ---HHHHHHHHcCCcCcHHHHHHCCCccEEcCHH
Confidence 2233445555679999999999999998754
No 89
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.46 E-value=0.0069 Score=54.81 Aligned_cols=91 Identities=19% Similarity=0.136 Sum_probs=62.9
Q ss_pred ccccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 2 AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 2 ~~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
..++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-...+|-. .|-..-+- +..
T Consensus 99 ~~~~kPvIAav~G~a~GgG~elalac--D~ria~~~a~fglpev~lGl~P~~Ggt~~L~------------------rlv 158 (725)
T 2wtb_A 99 EAARKPSVAAIDGLALGGGLELAMAC--HARISAPAAQLGLPELQLGVIPGFGGTQRLP------------------RLV 158 (725)
T ss_dssp CTSSSCEEEEECSEEETHHHHHHHHS--SEEEECTTCEEECCGGGGTCCCCSSHHHHHH------------------HHH
T ss_pred HhCcCcEEEEECCccCcccHHHHHhC--CEEEEcCCCEEeCchhccCCCCCccHHHHHH------------------Hhc
Confidence 45688999999999999999999999 589999999977643333322 22222111 111
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
| ...-.+++-....++|+||+++||||+|..+.
T Consensus 159 G--~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~ 191 (725)
T 2wtb_A 159 G--LTKALEMILTSKPVKAEEGHSLGLIDAVVPPA 191 (725)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSCSEECCTT
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCccceEcChh
Confidence 2 22233444455689999999999999998643
No 90
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=96.34 E-value=0.008 Score=53.23 Aligned_cols=89 Identities=16% Similarity=0.097 Sum_probs=63.8
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeeccc--CeeeeecCC-CCCC--CCCHHHHHHHHHHHHHHHHHHHHHHH-
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN--SSTKLYLPV-VGRS--SGPVTDMWRKAKDLEANAESYIELLA- 76 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pn--a~iMIH~p~-~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya- 76 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++ ++|.+-... +|-. .|...-+ .
T Consensus 127 ~~pKPVIAAVnG~AlGGGleLALAC--D~rIAse~~~A~FglPEv~~LGL~Pg~Ggt~rL------------------p~ 186 (556)
T 2w3p_A 127 HSGLKFLAAVNGACAGGGYELALAC--DEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRV------------------TD 186 (556)
T ss_dssp HTSCEEEEEECSEEETHHHHHHHHS--SEEEEECSSSCEEECCHHHHHSSCCTTTHHHHH------------------HH
T ss_pred cCCCCEEEEECCeechhhHHHHHhC--CEEEEcCCCCcEEecccccccCCCCCccHHHHH------------------Hh
Confidence 4688999999999999999999999 58999999 887763222 2211 1211111 1
Q ss_pred -hhcCCCHHHHHHhhcCCCcccHHHHHHcCCceeeecC
Q 032040 77 -KGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 77 -~~Tg~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
+..| ...-.+++-....++++||+++||||+|..+
T Consensus 187 ~RlVG--~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~ 222 (556)
T 2w3p_A 187 KRKVR--HDRADIFCTVVEGVRGERAKAWRLVDEVVKP 222 (556)
T ss_dssp TSCCC--HHHHHHHTTCSSCEEHHHHHHTTSCSEEECH
T ss_pred hccCC--HHHHHHHHHcCCCCCHHHHHHCCCceEEeCh
Confidence 2223 3455566667778999999999999999853
No 91
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=95.86 E-value=0.013 Score=53.36 Aligned_cols=90 Identities=21% Similarity=0.189 Sum_probs=63.4
Q ss_pred cccCceEEEehhhhHHHHHHHHhcCCCCceeecccCeeeeecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 032040 3 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 3 ~i~~~V~T~~~G~AaS~AslIl~aG~~~~R~a~pna~iMIH~p~~~~~--~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg 80 (148)
.++.||.+.+-|.|.+.|.-|.+++ +.|++.++++|-+-...+|-. .|-..-|- +..|
T Consensus 104 ~~~kPvIAai~G~a~GGG~elalac--D~ria~~~a~fg~pev~lGl~Pg~ggt~rL~------------------rlvG 163 (742)
T 3zwc_A 104 RYQKPVLAAIQGVALGGGLELALGC--HYRIANAKARVGLPEVTLGILPGARGTQLLP------------------RVVG 163 (742)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHTS--SEEEEETTCEEECGGGGGTCCCTTTHHHHHH------------------HHHC
T ss_pred hCCCCEEEEECccchHHHHHHHHhc--CEEEEcCCCEEECcccCcccCCCccHHHHHH------------------Hhhh
Confidence 4688999999999999999999999 589999999887643332321 12221111 1112
Q ss_pred CCHHHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 81 KPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 81 ~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
...-.+++-....++|+||+++||||+|.+..
T Consensus 164 --~~~A~~l~ltG~~i~a~eA~~~GLv~~vv~~d 195 (742)
T 3zwc_A 164 --VPVALDLITSGKYLSADEALRLGILDAVVKSD 195 (742)
T ss_dssp --HHHHHHHHHHCCCEEHHHHHHHTSCSEEESSC
T ss_pred --HHHHHHHHHcCCchhHHHHHHcCCccEecCch
Confidence 22334445556789999999999999998754
No 92
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=94.34 E-value=0.049 Score=44.53 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=50.9
Q ss_pred cCceEEEehhhhHHHHHHHH-hcCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCH
Q 032040 5 KSKVYTVNCGMAYGQAAMLL-SVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPK 83 (148)
Q Consensus 5 ~~~V~T~~~G~AaS~AslIl-~aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~~ 83 (148)
+.|+.+++.|-|++.++..+ ++| +.++|.|+|+|.+=-| .-+. +-+|..
T Consensus 191 ~vP~IavV~G~~~GGg~a~~a~~~--D~via~~~A~i~v~Gp---------~~i~------------------~~ig~~- 240 (304)
T 2f9y_B 191 GLPYISVLTDPTMGGVSASFAMLG--DLNIAEPKALIGFAGP---------RVIE------------------QTVREK- 240 (304)
T ss_dssp TCCEEEEEEEEEEHHHHTTGGGCC--SEEEECTTCBEESSCH---------HHHH------------------HHHTSC-
T ss_pred CCCEEEEEECCCccHHHHHHHhcC--CEEEEeCCcEEEeecH---------HHHH------------------HHhCcc-
Confidence 78999999999999986664 456 5789999998776311 1111 111211
Q ss_pred HHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 84 EEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 84 e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
+. +-..+++++.+.|+||.|+.+.
T Consensus 241 ------l~-~~~~~Ae~~~~~Glvd~Vv~~~ 264 (304)
T 2f9y_B 241 ------LP-PGFQRSEFLIEKGAIDMIVRRP 264 (304)
T ss_dssp ------CC-TTTTBHHHHGGGTCCSEECCHH
T ss_pred ------CC-cccCCHHHHHhcCCccEEeCcH
Confidence 22 3457999999999999998663
No 93
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=94.04 E-value=0.037 Score=48.88 Aligned_cols=43 Identities=16% Similarity=0.067 Sum_probs=34.3
Q ss_pred ccCceEEEehhhhHHHHHHHHhcC--CCCceeecccCeeeeecCC
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSVG--AKGYRGLQPNSSTKLYLPV 46 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~aG--~~~~R~a~pna~iMIH~p~ 46 (148)
.+.|+.|+++|-++|.|.+.+++. ..+..+|.|||++.+-.|.
T Consensus 419 ~~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~Vmgpe 463 (548)
T 2bzr_A 419 ATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGAS 463 (548)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHH
T ss_pred CCCCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEEecCHH
Confidence 468999999999999988777651 1357789999999887665
No 94
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=93.17 E-value=0.12 Score=45.29 Aligned_cols=90 Identities=21% Similarity=0.268 Sum_probs=53.1
Q ss_pred ccCceEEEehhhhHHHHHHHHhcC--CCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSVG--AKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGK 81 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~aG--~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~ 81 (148)
.+.|+.|+++|-++|.|.+.+++. ..+..||.|||.+-+=.|. | +..+.- .+++++. .
T Consensus 402 ~~vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~Vm~pe-----g-aa~Il~-r~~~~~~-------------~ 461 (527)
T 1vrg_A 402 ATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIAVMGPE-----G-AANIIF-KREIEAS-------------S 461 (527)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHH-----H-HHHHHT-HHHHHHS-------------S
T ss_pred CCCCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEEecCHH-----H-HHHHHh-hhhhhcc-------------c
Confidence 468999999999999888766551 1246788888877663333 2 112210 0111110 0
Q ss_pred CHHHHHH-hhc--CCCcccHHHHHHcCCceeeecC
Q 032040 82 PKEEIAK-DIQ--RPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 82 ~~e~i~~-~m~--rd~~lta~EA~eyGlID~Ii~~ 113 (148)
..+++.+ +.. ++...+|..+.+.|+||+||++
T Consensus 462 d~~~~~~~~~~~y~~~~~~p~~~~~~g~iD~II~p 496 (527)
T 1vrg_A 462 NPEETRRKLIEEYKQQFANPYIAASRGYVDMVIDP 496 (527)
T ss_dssp CHHHHHHHHHHHHHHHTSSHHHHHHTTSSSEECCG
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHcCCCCeeeCH
Confidence 1122211 111 2334788889999999999986
No 95
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=92.82 E-value=0.096 Score=45.92 Aligned_cols=90 Identities=17% Similarity=0.189 Sum_probs=52.9
Q ss_pred ccCceEEEehhhhHHHHHHHHhcC--CCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSVG--AKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGK 81 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~aG--~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~ 81 (148)
.+.|+.|+++|-++|.|.+.+++. ..+.-||.|||.+-+=.|. | +..+.- .+++++. .
T Consensus 398 ~~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~Vm~pe-----g-aa~Il~-r~~~~~~-------------~ 457 (523)
T 1on3_A 398 ATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIAVMGAE-----G-AANVIF-RKEIKAA-------------D 457 (523)
T ss_dssp CCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEESSCHH-----H-HHHHHT-HHHHHHS-------------S
T ss_pred CCCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEEecCHH-----H-HHHHHh-hhhhhcc-------------c
Confidence 467999999999999888766551 1246788888877664343 2 111110 0111110 0
Q ss_pred CHHHHHH-hh--cCCCcccHHHHHHcCCceeeecC
Q 032040 82 PKEEIAK-DI--QRPKYMQAKEAIVYGLADKIIDS 113 (148)
Q Consensus 82 ~~e~i~~-~m--~rd~~lta~EA~eyGlID~Ii~~ 113 (148)
..+++.+ +. -++.+.+|..+.+.|+||+||++
T Consensus 458 d~~~~~~~~~~~y~~~~~~p~~~a~~g~iD~II~p 492 (523)
T 1on3_A 458 DPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVIDP 492 (523)
T ss_dssp CHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEECCG
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHhcCCCCEeeCH
Confidence 1111111 11 11234678889999999999986
No 96
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=91.83 E-value=0.24 Score=44.04 Aligned_cols=93 Identities=12% Similarity=0.135 Sum_probs=54.0
Q ss_pred ccCceEEEehhhhHHHHHHHHhcCC--C--CceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSVGA--K--GYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 79 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~aG~--~--~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~T 79 (148)
.+.|+.|+++|-+.|.|.+.+++.. . +..+|.|||.+-+=.|. | +..+.- ...++... +.
T Consensus 443 a~vP~itvI~g~~~Ggg~~am~~~~~~~~~d~~~a~p~A~~~Vm~pe-----g-aa~Il~-r~~~~~~~---------~~ 506 (587)
T 1pix_A 443 SHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAATEIAVMNGE-----T-AATAMY-SRRLAKDR---------KA 506 (587)
T ss_dssp CCCCEEEEECSEEETTHHHHTTCTTCTTTEEEEEECTTCEEESSCHH-----H-HHHHHH-HHHHHHHH---------HT
T ss_pred CCCCEEEEEcCCCccHHHHHhcCcccCcccceeeeccCCeEecCCHH-----H-HHHHHH-hhhhhhhh---------hc
Confidence 4789999999999999887776511 2 35678888877653332 2 122210 11111111 01
Q ss_pred CCCHH-------HHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 80 GKPKE-------EIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 80 g~~~e-------~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
|.+.+ ++.+...+ ..+|..|.+.|+||.||++.
T Consensus 507 g~~~~~~~~~~~~~~~~y~~--~~~p~~aa~~g~iD~VI~p~ 546 (587)
T 1pix_A 507 GKDLQPTIDKMNNLIQAFYT--KSRPKVCAELGLVDEIVDMN 546 (587)
T ss_dssp TCCCHHHHHHHHHHHHHHHH--TTSHHHHHHHTSSSEECCTT
T ss_pred CCChHHHHHHHHHHHHHHHH--hCCHHHHHhcCCCccccCHH
Confidence 11111 12222222 48999999999999999864
No 97
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=87.76 E-value=0.073 Score=46.82 Aligned_cols=89 Identities=17% Similarity=0.203 Sum_probs=53.0
Q ss_pred ccCceEEEehhhhHHHHHHHHhcC---CCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHH-------HHHHHHHHH
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSVG---AKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDL-------EANAESYIE 73 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~aG---~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l-------~~~~~~l~~ 73 (148)
.+.|+.|+++|-+.|.|. +.+++ ..+..||.|||.+-+=.|. + +..+. ..+++ +..++.+.+
T Consensus 404 a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~Vm~~e-g-----aa~il-~r~~~~~~~~d~~~~~~~~~~ 475 (530)
T 3iav_A 404 ATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIAVMGAQ-G-----AVNIL-HRRTIADAGDDAEATRARLIQ 475 (530)
T ss_dssp CCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEESSCHH-H-----HHHHH-TSTTTSTTCTTCHHHHHHHHH
T ss_pred CCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEecCCHH-H-----HHHHH-hhhhhhhcccCHHHHHHHHHH
Confidence 478999999999999555 55554 1357788899987764443 1 11111 00011 111222222
Q ss_pred HHHhhcCCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCchh
Q 032040 74 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDA 116 (148)
Q Consensus 74 iya~~Tg~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~~ 116 (148)
-|. +...+|..|.+.|+||.||++...
T Consensus 476 ~y~----------------~~~~~p~~aa~~~~vD~VIdP~~T 502 (530)
T 3iav_A 476 EYE----------------DALLNPYTAAERGYVDAVIMPSDT 502 (530)
T ss_dssp HHH----------------HHHSSSHHHHHTTSSSEECCGGGH
T ss_pred HHH----------------HhcCCHHHHHhcCCCCcccCHHHH
Confidence 221 123578889999999999987543
No 98
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=86.70 E-value=0.41 Score=42.08 Aligned_cols=90 Identities=18% Similarity=0.215 Sum_probs=53.3
Q ss_pred ccCceEEEehhhhHHHHHHHHhc--CCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHhhc
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSV--GAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEA--NAESYIELLAKGT 79 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~a--G~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~--~~~~l~~iya~~T 79 (148)
.+.|+.|+++|-+.|.|.+.+++ -..+..||.|||.+-+=.|. + +..+. ..+++.. ..+.+.+-|.
T Consensus 410 a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~Vm~pe-g-----aa~Il-~r~~~~~~~~~~~~~~~y~--- 479 (531)
T 3n6r_B 410 ATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAVMGAK-G-----ATEII-HRGDLGDPEKIAQHTADYE--- 479 (531)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHH-H-----HHHHH-CCTTTTSTTHHHHHHHHHH---
T ss_pred CCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEecCCHH-H-----HHHHH-hcccccchhHHHHHHHHHH---
Confidence 46899999999999998877764 11356788999987764443 1 11111 0011100 0111111121
Q ss_pred CCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCchh
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDA 116 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~~ 116 (148)
+...+|..|-+.|+||.||++...
T Consensus 480 -------------~~~~~p~~aa~~~~vD~vIdP~~T 503 (531)
T 3n6r_B 480 -------------ERFANPFVASERGFVDEVIQPRST 503 (531)
T ss_dssp -------------HHHSSSHHHHHHTSSSEECCGGGH
T ss_pred -------------HHhcCHHHHHhcCccCcccCHHHH
Confidence 123567789999999999987543
No 99
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=83.48 E-value=1.9 Score=38.05 Aligned_cols=94 Identities=13% Similarity=0.100 Sum_probs=53.8
Q ss_pred ccCceEEEehhhhHHHHHHHHhcC--CCCceeecccCeeeeecCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhhcC
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSVG--AKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRK-AKDLEANAESYIELLAKGTG 80 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~aG--~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~-a~~l~~~~~~l~~iya~~Tg 80 (148)
.+.|+.|+++|-+.+.|.+.+++. ..+..+|.|||.+-+=.|. |-+.=|... .++++ ..|
T Consensus 424 a~vP~itvi~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~Vmgpe-----gaa~il~~~~~~~~~------------~~g 486 (555)
T 3u9r_B 424 ARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGE-----QAAGVLAQVKREQAE------------RAG 486 (555)
T ss_dssp CCSCEEEEEEEEEETTHHHHTTCGGGCCSEEEECTTCEEESSCHH-----HHHHHHHHHHHHHHH------------TTT
T ss_pred CCCCEEEEEeCCccchhhHhhcCccCCCCeEEEcCCcEEEcCCHH-----HHHHHHHHHHHHHHH------------hcc
Confidence 468999999999999888776531 2356688888877653332 212111110 11111 111
Q ss_pred C--CH-------HHHHHhhcCCCcccHHHHHHcCCceeeecCchh
Q 032040 81 K--PK-------EEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDA 116 (148)
Q Consensus 81 ~--~~-------e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~~ 116 (148)
+ +. +++.+..+ ...+|--|-+.|+||.||++...
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~--~~~~p~~aa~r~~vD~vIdP~~T 529 (555)
T 3u9r_B 487 QQLGVEEEAKIKAPILEQYE--HQGHPYYSSARLWDDGVIDPAQT 529 (555)
T ss_dssp CCCCHHHHHHHHHHHHHHHH--HHHSHHHHHHTTSSSCBCCGGGH
T ss_pred CCCCcchHHHHHHHHHHHHH--HhCCHHHHhhccccCcccChHHH
Confidence 1 11 11212221 22689999999999999987653
No 100
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=83.34 E-value=0.87 Score=40.49 Aligned_cols=98 Identities=11% Similarity=0.092 Sum_probs=53.3
Q ss_pred ccCceEEEehhhhHHHHHHHHhc---CCC-CceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHH---HHHHHH
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSV---GAK-GYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAES---YIELLA 76 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~a---G~~-~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~---l~~iya 76 (148)
.+.|+.|+++|-+.|.|.+.+++ +.. ...+|.|||.+-+=.|. | +..+. ..+++.+..+. ....-+
T Consensus 445 a~VP~itvI~g~~~Ggg~~am~~~~~~~~~~~~~awp~A~~sVm~pE-----g-aa~Il-~~~~~~~~~~~~~~~~~~~~ 517 (588)
T 3gf3_A 445 SKLPSLEITIRKASAAAHYVLGGPQGNNTNVFSIGTGACEYYVMPGE-----T-AANAM-YSRKLVKAKKAGEDLQPIIG 517 (588)
T ss_dssp HCSCEEEEESSEEETTHHHHTTCTTCTTTEEEEEECTTCEEESSCHH-----H-HHHHH-HHHHHHHC-------CHHHH
T ss_pred CCCCEEEEEcCCccHHHHHHhcccccCCccceEEECCCceEEeCCHH-----H-HHHHH-hhhHHhhhhccccccchHHH
Confidence 47899999999999987765554 110 14467788877764443 2 11211 11222211110 000000
Q ss_pred hhcCCCHHHHHHhhcCCCcccHHHHHHcCCceeeecCch
Q 032040 77 KGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 115 (148)
Q Consensus 77 ~~Tg~~~e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~~ 115 (148)
. ..++.+..++. .+|--|-+.|+||.||++..
T Consensus 518 ~-----~~~~~~~y~~~--~~p~~aA~r~~vD~VIdP~~ 549 (588)
T 3gf3_A 518 K-----MNDMIQMYTDK--SRPKYCTEKGMVDEIVDMTE 549 (588)
T ss_dssp H-----HHHHHHHHHHT--TSHHHHHHTTSSSEECCGGG
T ss_pred H-----HHHHHHHHHHh--CCHHHHHhcCCCCeeeCHHH
Confidence 0 11232333332 58999999999999999864
No 101
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=78.35 E-value=0.39 Score=42.03 Aligned_cols=41 Identities=20% Similarity=0.190 Sum_probs=32.3
Q ss_pred ccCceEEEehhhhHHHHHHHHhc----CCCCceeecccCeeeeecCC
Q 032040 4 CKSKVYTVNCGMAYGQAAMLLSV----GAKGYRGLQPNSSTKLYLPV 46 (148)
Q Consensus 4 i~~~V~T~~~G~AaS~AslIl~a----G~~~~R~a~pna~iMIH~p~ 46 (148)
.+.|+.|+++|-++|.|.+.++. + +.-+|.|+|.+-+=.|.
T Consensus 397 ~~vP~Isvi~g~~~GGg~~~~a~~a~~~--D~v~a~p~A~i~v~gpe 441 (522)
T 1x0u_A 397 ATVPKITVIVRKSYGGAHIAMSIKSLGA--DLVYAWPTAEIAVTGPE 441 (522)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTCCGGGTC--SEEEECTTCEEESSCHH
T ss_pred CCCCEEEEEeCCcccHHHHHhcccccCC--CEEEEeCCCEEEecCHH
Confidence 46799999999999999888766 4 46788899887765444
No 102
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=64.83 E-value=2.4 Score=39.03 Aligned_cols=24 Identities=17% Similarity=0.102 Sum_probs=19.9
Q ss_pred CCcccHHHHHHcCCceeeecCchh
Q 032040 93 PKYMQAKEAIVYGLADKIIDSQDA 116 (148)
Q Consensus 93 d~~lta~EA~eyGlID~Ii~~~~~ 116 (148)
+.+-++..|.+.|+||+||++...
T Consensus 634 ~~~~~p~r~a~~G~Id~VIdp~~T 657 (793)
T 2x24_A 634 DLHDTAGRMLEKGVIYDILEWKTA 657 (793)
T ss_dssp HTTSBHHHHHHTTSSSEEECHHHH
T ss_pred HhcCCHHHHHHcCcCccccCHHHH
Confidence 455688999999999999997653
No 103
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=52.00 E-value=11 Score=30.25 Aligned_cols=73 Identities=11% Similarity=0.065 Sum_probs=45.8
Q ss_pred cCceEEEehhhhHHHHHHHHh-cCCCCceeecccCeeeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCH
Q 032040 5 KSKVYTVNCGMAYGQAAMLLS-VGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPK 83 (148)
Q Consensus 5 ~~~V~T~~~G~AaS~AslIl~-aG~~~~R~a~pna~iMIH~p~~~~~~G~~~dl~~~a~~l~~~~~~l~~iya~~Tg~~~ 83 (148)
..|..+++.|-+.+.++..++ .| +.-++.|+|.+-+=-|. -++... +..
T Consensus 194 ~vP~Isvv~g~~~GG~~as~a~~~--D~i~a~p~A~i~~aGP~---------vi~~~~------------------~~~- 243 (285)
T 2f9i_B 194 GLLYISYLTHPTTGGVSASFASVG--DINLSEPKALIGFAGRR---------VIEQTI------------------NEK- 243 (285)
T ss_dssp TCCEEEEEEEEEEHHHHTTGGGCC--SEEEECTTCBEESSCHH---------HHHHHH------------------TSC-
T ss_pred CCCEEEEEeCCccHHHHHHhhhCC--CEEEEeCCcEEEEcCHH---------HHHHHh------------------ccc-
Confidence 578899999888777765543 34 35577788866653222 221111 111
Q ss_pred HHHHHhhcCCCcccHHHHHHcCCceeeecCc
Q 032040 84 EEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 114 (148)
Q Consensus 84 e~i~~~m~rd~~lta~EA~eyGlID~Ii~~~ 114 (148)
. .+-+-+++-..+.|+||.|+++.
T Consensus 244 ------~-~e~~~~Ae~~~~~G~iD~Iv~~~ 267 (285)
T 2f9i_B 244 ------L-PDDFQTAEFLLEHGQLDKVVHRN 267 (285)
T ss_dssp ------C-CTTTTBHHHHHHTTCCSEECCGG
T ss_pred ------c-hHhHhhHHHHHhcCCccEEeChH
Confidence 1 12345788889999999999865
No 104
>2i6e_A Hypothetical protein; NYSGXRC,10093B, structural genomics, PSI-2, protein structure initiative; 2.50A {Deinococcus radiodurans} SCOP: c.94.1.1
Probab=47.11 E-value=32 Score=27.07 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhcCCCc
Q 032040 60 KAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKY 95 (148)
Q Consensus 60 ~a~~l~~~~~~l~~iya~~Tg~~~e~i~~~m~rd~~ 95 (148)
..++.....+.+.+++++.+|++.+.+...+.+-.|
T Consensus 226 a~~~~~~~~~e~~~~~a~~~gl~~~~i~~yl~~~~~ 261 (301)
T 2i6e_A 226 ARRRGIGHLAEVSQRHAEKLGLPERVVQHYLWNFRY 261 (301)
T ss_dssp HHHHHHHTHHHHHHHHHHTTTCCHHHHHHHHHTCBC
T ss_pred HHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHhCee
Confidence 334444445668889999999999999888766555
No 105
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=44.16 E-value=73 Score=24.31 Aligned_cols=46 Identities=22% Similarity=0.270 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHhhc-CCCc----ccH----------HHHHHcCCceeeec
Q 032040 67 NAESYIELLAKGTGKPKEEIAKDIQ-RPKY----MQA----------KEAIVYGLADKIID 112 (148)
Q Consensus 67 ~~~~l~~iya~~Tg~~~e~i~~~m~-rd~~----lta----------~EA~eyGlID~Ii~ 112 (148)
..+...+++++.+|.+.+.+...++ +..| ++. +..++.|+|++-+.
T Consensus 245 ~p~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gli~~~~~ 305 (324)
T 3ksx_A 245 DRAGSIKTLAQVSGLPPAVVERTLAHRPPASVQPLSAQVIKAQQATADLFYAQRLLPKRVL 305 (324)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHTCCCCCCBCCCHHHHHHHHHHHHHHHHTTSSSSCCC
T ss_pred CHHHHHHHHHHHHCcCHHHHHHHHhhcCcCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCc
Confidence 3345677788889999999988887 4333 333 34467788775443
No 106
>2nxo_A Hypothetical protein SCO4506; PFAM, DUF178, NYSGXRC, 10093F, PSI-2, structural genomics, protein structure initiative; 2.04A {Streptomyces coelicolor} SCOP: c.94.1.1
Probab=39.51 E-value=26 Score=26.91 Aligned_cols=24 Identities=21% Similarity=0.145 Sum_probs=18.2
Q ss_pred HHHHHHHHhhcCCCHHHHHHhhcC
Q 032040 69 ESYIELLAKGTGKPKEEIAKDIQR 92 (148)
Q Consensus 69 ~~l~~iya~~Tg~~~e~i~~~m~r 92 (148)
+...+++++.+|++.+.+...+.+
T Consensus 223 ~ea~~~~a~~~~~~~~~~~~~~~~ 246 (291)
T 2nxo_A 223 EKVAEQAARWEAFDEDTLAKYFTT 246 (291)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHh
Confidence 456777888899999888776644
No 107
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=35.09 E-value=62 Score=19.37 Aligned_cols=31 Identities=13% Similarity=0.092 Sum_probs=24.0
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAI 102 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~ 102 (148)
..-+++.+|++...|..+.......+.+...
T Consensus 18 q~~lA~~~gis~~~i~~~e~g~~~p~~~~l~ 48 (77)
T 2k9q_A 18 AKSVAEEMGISRQQLCNIEQSETAPVVVKYI 48 (77)
T ss_dssp HHHHHHHHTSCHHHHHHHHTCCSCCHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHcCCCCCCHHHHH
Confidence 4568899999999998888877666666544
No 108
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=34.74 E-value=69 Score=18.88 Aligned_cols=32 Identities=9% Similarity=-0.010 Sum_probs=25.0
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCC-cccHHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPK-YMQAKEAIV 103 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~-~lta~EA~e 103 (148)
..-+++.+|++...|..+..... ..+.+....
T Consensus 23 q~~lA~~~gis~~~i~~~e~g~~~~~~~~~l~~ 55 (78)
T 3b7h_A 23 INRVATLAGLNQSTVNAMFEGRSKRPTITTIRK 55 (78)
T ss_dssp HHHHHHHHTCCHHHHHHHHCTTCCCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHH
Confidence 55688999999999999888877 677765543
No 109
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=33.52 E-value=1.1e+02 Score=22.20 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=19.0
Q ss_pred CCCHHHHHHhhcCCCcccHHHHH
Q 032040 80 GKPKEEIAKDIQRPKYMQAKEAI 102 (148)
Q Consensus 80 g~~~e~i~~~m~rd~~lta~EA~ 102 (148)
|+|+++|++.+.=..-||++|=-
T Consensus 135 gktpeeiR~~f~I~nd~t~eEe~ 157 (169)
T 3v7d_A 135 GRSPEEIRRTFNIVNDFTPEEEA 157 (169)
T ss_dssp TCCHHHHHHHHTCCCCCCHHHHH
T ss_pred CCCHHHHHHHcCCCCCCCHHHHH
Confidence 89999999998776668997643
No 110
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=33.26 E-value=74 Score=18.55 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=24.8
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 103 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~e 103 (148)
..-+++.+|++...|..+.......+.+....
T Consensus 21 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 52 (76)
T 1adr_A 21 QAALGKMVGVSNVAISQWERSETEPNGENLLA 52 (76)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45688999999999999888777777766543
No 111
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=32.60 E-value=75 Score=18.41 Aligned_cols=43 Identities=12% Similarity=0.027 Sum_probs=29.0
Q ss_pred HHHHHHHHHHH---HHHHHHhhcCCCHHHHHHhhcCCCcccHHHHH
Q 032040 60 KAKDLEANAES---YIELLAKGTGKPKEEIAKDIQRPKYMQAKEAI 102 (148)
Q Consensus 60 ~a~~l~~~~~~---l~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~ 102 (148)
..+.|...+.. -..-+++.+|++...|..+.......+.+...
T Consensus 14 ~~~~l~~~r~~~g~s~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 59 (74)
T 1y7y_A 14 FGQRLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNIL 59 (74)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHH
Confidence 34444444432 24558888999999998888877777776544
No 112
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=31.71 E-value=73 Score=18.04 Aligned_cols=31 Identities=13% Similarity=0.053 Sum_probs=24.0
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAI 102 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~ 102 (148)
..-+++.+|++...|..+.....-.+.+...
T Consensus 21 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 51 (68)
T 2r1j_L 21 QAALGKMVGVSNVAISQWERSETEPNGENLL 51 (68)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCBHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHcCCCCCCHHHHH
Confidence 4568889999999999888877666766543
No 113
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=30.97 E-value=89 Score=18.76 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=24.5
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 103 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~e 103 (148)
..-+++.+|++...|..+.......+.+....
T Consensus 30 q~elA~~~gis~~~is~~e~g~~~~~~~~l~~ 61 (83)
T 3f6w_A 30 QKELAARLGRPQSFVSKTENAERRLDVIEFMD 61 (83)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHH
Confidence 45688889999999988888777777665544
No 114
>2wiu_B HTH-type transcriptional regulator HIPB; transferase transcription complex, serine kinase, DNA-bindin mercury derivative, repressor; 2.35A {Escherichia coli} PDB: 3dnv_B* 3dnw_B* 3hzi_B*
Probab=30.73 E-value=67 Score=19.49 Aligned_cols=48 Identities=17% Similarity=0.068 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhhcCCCcccHHHHH
Q 032040 55 TDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAI 102 (148)
Q Consensus 55 ~dl~~~a~~l~~~~~~l~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~ 102 (148)
.++....+.+...+..-..-+++.+|++...|..+.......+.+...
T Consensus 11 ~~~~~~l~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 58 (88)
T 2wiu_B 11 TQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFF 58 (88)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHCGGGCBHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHH
Confidence 344444444433332235568999999999999988877777776553
No 115
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=29.71 E-value=94 Score=18.68 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=24.9
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 103 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~e 103 (148)
..-+++.+|++...|..+.....-.+.+....
T Consensus 28 q~~lA~~~gvs~~~is~~e~g~~~~~~~~~~~ 59 (80)
T 3kz3_A 28 YESVADKMGMGQSAVAALFNGINALNAYNAAL 59 (80)
T ss_dssp HHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45588999999999999888877777765543
No 116
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=29.07 E-value=90 Score=18.25 Aligned_cols=32 Identities=16% Similarity=0.031 Sum_probs=24.2
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 103 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~e 103 (148)
..-+++.+|++...|..+.......+.+....
T Consensus 26 q~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 57 (77)
T 2b5a_A 26 QEELADLAGLHRTYISEVERGDRNISLINIHK 57 (77)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHH
Confidence 45578889999999988887776677665443
No 117
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=28.76 E-value=97 Score=18.56 Aligned_cols=33 Identities=15% Similarity=0.026 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCCHHHHHHhhcCCCcccHHHHHH
Q 032040 71 YIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 103 (148)
Q Consensus 71 l~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~e 103 (148)
-..-+++.+|++...|..+.......+.+....
T Consensus 26 sq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 58 (82)
T 3s8q_A 26 TQEDLAYKSNLDRTYISGIERNSRNLTIKSLEL 58 (82)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTCCCCBHHHHHH
T ss_pred CHHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHH
Confidence 355688999999999998888777777766543
No 118
>3mn2_A Probable ARAC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=28.51 E-value=1e+02 Score=19.68 Aligned_cols=52 Identities=6% Similarity=0.087 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHH---------HHhhcCCCc-ccHH-HHHHcCCce
Q 032040 57 MWRKAKDLEANAESYIELLAKGTGKPKEEI---------AKDIQRPKY-MQAK-EAIVYGLAD 108 (148)
Q Consensus 57 l~~~a~~l~~~~~~l~~iya~~Tg~~~e~i---------~~~m~rd~~-lta~-EA~eyGlID 108 (148)
+...++.+.--...+...+.+.+|.++.++ ..++....+ ++-. =|.+.||-|
T Consensus 21 ~~~lA~~~~~s~~~l~r~fk~~~G~s~~~~~~~~Rl~~A~~lL~~~~~~~si~~IA~~~Gf~~ 83 (108)
T 3mn2_A 21 IEKLTALTGISSRGIFKAFQRSRGYSPMAFAKRVRLQHAHNLLSDGATPTTVTAAALSCGFSN 83 (108)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHSSSSCCCHHHHHHHTTCCC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCCCC
Confidence 334455555556778888889999887644 334444433 5554 477788766
No 119
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=27.08 E-value=1.3e+02 Score=21.23 Aligned_cols=48 Identities=21% Similarity=0.214 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHHH--HHHHHHHHHHHhh-cCCCHHHHHHhhcCCCcccHHH
Q 032040 53 PVTDMWRKAKDLE--ANAESYIELLAKG-TGKPKEEIAKDIQRPKYMQAKE 100 (148)
Q Consensus 53 ~~~dl~~~a~~l~--~~~~~l~~iya~~-Tg~~~e~i~~~m~rd~~lta~E 100 (148)
+.-+|-..+.+|+ .+.+.-.+.++.. .|+|+++|++.+.=..-||++|
T Consensus 98 ~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eE 148 (159)
T 2ast_A 98 TLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEE 148 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHH
Confidence 3445555666663 3334444445444 4899999999987666688765
No 120
>2ict_A Antitoxin HIGA; helix-turn-helix, structural genomics, PSI-2, protein struct initiative, northeast structural genomics consortium, NESG; 1.63A {Escherichia coli} SCOP: a.35.1.3 PDB: 2icp_A
Probab=25.60 E-value=1e+02 Score=19.11 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=26.4
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 103 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~e 103 (148)
..-+++++|++...|..+.......+.+.+..
T Consensus 24 q~~lA~~~gis~~~is~~e~g~~~~~~~~~~~ 55 (94)
T 2ict_A 24 LREFARAMEIAPSTASRLLTGKAALTPEMAIK 55 (94)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTSSCCCHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHH
Confidence 45689999999999999988888888876654
No 121
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=25.19 E-value=1.3e+02 Score=21.39 Aligned_cols=46 Identities=20% Similarity=0.164 Sum_probs=27.2
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHhh-cCCCHHHHHHhhcCCCcccHHH
Q 032040 55 TDMWRKAKDLE--ANAESYIELLAKG-TGKPKEEIAKDIQRPKYMQAKE 100 (148)
Q Consensus 55 ~dl~~~a~~l~--~~~~~l~~iya~~-Tg~~~e~i~~~m~rd~~lta~E 100 (148)
-+|-..|.+|+ .+-+.-.+.++.. .|+|+++|++.+.=..-||++|
T Consensus 99 ~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eE 147 (160)
T 2p1m_A 99 FELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEE 147 (160)
T ss_dssp --CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHH
Confidence 34444455553 2333334444444 3899999999987666688866
No 122
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=24.97 E-value=1.1e+02 Score=17.65 Aligned_cols=31 Identities=0% Similarity=-0.072 Sum_probs=22.9
Q ss_pred HHHHHhhcC--CCHHHHHHhhcCCCcccHHHHH
Q 032040 72 IELLAKGTG--KPKEEIAKDIQRPKYMQAKEAI 102 (148)
Q Consensus 72 ~~iya~~Tg--~~~e~i~~~m~rd~~lta~EA~ 102 (148)
..-+++.+| .+...|..+.......+.+...
T Consensus 24 q~~lA~~~g~~is~~~i~~~e~g~~~~~~~~l~ 56 (71)
T 2ewt_A 24 LHGVEEKSQGRWKAVVVGSYERGDRAVTVQRLA 56 (71)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHTCSCCCHHHHH
T ss_pred HHHHHHHHCCcCCHHHHHHHHCCCCCCCHHHHH
Confidence 455788889 8988888887776666666543
No 123
>3g5g_A Regulatory protein; transcriptional regulator, helix-turn-helix, restriction- modification, transcription regulator; 2.80A {Enterobacter SP} PDB: 3fya_A
Probab=24.45 E-value=1.2e+02 Score=19.49 Aligned_cols=44 Identities=11% Similarity=-0.049 Sum_probs=30.7
Q ss_pred HHHHHHHHHHH---HHHHHHhhcCCCHHHHHHhhcCCCcccHHHHHH
Q 032040 60 KAKDLEANAES---YIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 103 (148)
Q Consensus 60 ~a~~l~~~~~~---l~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~e 103 (148)
..+.|..++.. -.+-+++.+|++...|..+.......+.+....
T Consensus 29 ig~~lr~~R~~~gltq~elA~~~gis~~~is~iE~G~~~ps~~~l~~ 75 (99)
T 3g5g_A 29 VSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLEL 75 (99)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHH
Confidence 34455444432 355689999999999998888877777776544
No 124
>2o4d_A Hypothetical protein PA0269; unknown function; 1.85A {Pseudomonas aeruginosa} SCOP: a.152.1.3 PDB: 2ijc_A
Probab=23.78 E-value=30 Score=24.82 Aligned_cols=51 Identities=12% Similarity=0.216 Sum_probs=35.2
Q ss_pred HhhcCCCHHHHHHhhcC--CCcccHHHHHHcCCceeeecCchhhhchhhHHHH
Q 032040 76 AKGTGKPKEEIAKDIQR--PKYMQAKEAIVYGLADKIIDSQDAAYEKRDYDMM 126 (148)
Q Consensus 76 a~~Tg~~~e~i~~~m~r--d~~lta~EA~eyGlID~Ii~~~~~~~~~~~~~~~ 126 (148)
+.+.|.+.++|...... ...+++.|..-+.|++++...........+|+.+
T Consensus 79 a~~~G~s~e~i~~l~~~~~~~~~~~~erA~l~~a~~lt~~~~~~v~d~~~~~l 131 (165)
T 2o4d_A 79 ARKAGETEQRLQALCVWQETPYFTPRERAALAWTEQLARLSQGALPHGLLDEL 131 (165)
T ss_dssp HHHTTCCHHHHHHGGGGGGCSCSCHHHHHHHHHHHHHHTGGGSCCCTTHHHHH
T ss_pred HHHcCCCHHHHHHHHhccccCCCCHHHHHHHHHHHHHHhCcCCCCCHHHHHHH
Confidence 44568999999877642 2468999999999999998754333344455543
No 125
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=23.70 E-value=1.2e+02 Score=17.75 Aligned_cols=32 Identities=13% Similarity=-0.056 Sum_probs=25.2
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 103 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~e 103 (148)
..-+++++|++...|..+.....-.+.+....
T Consensus 24 q~~lA~~~gis~~~is~~e~g~~~~~~~~l~~ 55 (73)
T 3omt_A 24 NLWLTETLDKNKTTVSKWCTNDVQPSLETLFD 55 (73)
T ss_dssp HHHHHHHTTCCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45588999999999999988877777766543
No 126
>2x26_A Periplasmic aliphatic sulphonates-binding protein; transport protein; 1.75A {Escherichia coli}
Probab=23.48 E-value=2.1e+02 Score=21.25 Aligned_cols=26 Identities=38% Similarity=0.432 Sum_probs=19.5
Q ss_pred HHHHHHHHhhcCCCHHHHHHhhcCCC
Q 032040 69 ESYIELLAKGTGKPKEEIAKDIQRPK 94 (148)
Q Consensus 69 ~~l~~iya~~Tg~~~e~i~~~m~rd~ 94 (148)
+...+++++.+|.+.+.+...+.+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (308)
T 2x26_A 221 EQSIALLAKTMGLPAPVIASYLDHRP 246 (308)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCcCHHHHHHHHhccC
Confidence 35677788888999998887776543
No 127
>1lmb_3 Protein (lambda repressor); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 1.80A {Enterobacteria phage lambda} SCOP: a.35.1.2 PDB: 1lrp_A 1rio_A 1lli_A*
Probab=22.62 E-value=1.4e+02 Score=18.20 Aligned_cols=31 Identities=16% Similarity=0.102 Sum_probs=24.2
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAI 102 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~ 102 (148)
..-+++.+|++...|..+.....-.+.+...
T Consensus 33 q~~lA~~~gis~~~is~~e~g~~~~~~~~l~ 63 (92)
T 1lmb_3 33 QESVADKMGMGQSGVGALFNGINALNAYNAA 63 (92)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHH
Confidence 4558889999999999888877767766543
No 128
>2gmy_A Hypothetical protein ATU0492; structural genomics, PSI, protein structure initiative; 1.60A {Agrobacterium tumefaciens str} SCOP: a.152.1.3
Probab=20.83 E-value=34 Score=24.00 Aligned_cols=52 Identities=10% Similarity=0.146 Sum_probs=36.2
Q ss_pred HhhcCCCHHHHHHhhcCC--CcccHHHHHHcCCceeeecCchhhhchhhHHHHH
Q 032040 76 AKGTGKPKEEIAKDIQRP--KYMQAKEAIVYGLADKIIDSQDAAYEKRDYDMML 127 (148)
Q Consensus 76 a~~Tg~~~e~i~~~m~rd--~~lta~EA~eyGlID~Ii~~~~~~~~~~~~~~~~ 127 (148)
+.+.|.+.++|....... ..+++.|..-..|+|++...........+|+.+.
T Consensus 59 a~~~G~~~~~i~~l~~~~~~~~~~~~e~A~l~~a~~lt~~~~~~v~d~~~~~l~ 112 (153)
T 2gmy_A 59 SRHDGLSEQWINLMSVWRESPVYTEQERALLGWVDAVTKIAETGAPDDAFETLR 112 (153)
T ss_dssp HHHTTCCHHHHHGGGGGGGCTTSCHHHHHHHHHHHHHHTHHHHCCCHHHHHHHH
T ss_pred HHHcCCCHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 456799999998875432 4689999988999999876533334455555553
No 129
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=20.69 E-value=1.1e+02 Score=17.14 Aligned_cols=31 Identities=13% Similarity=-0.080 Sum_probs=23.1
Q ss_pred HHHHHhhcCCCHHHHHHhhcCCCcccHHHHH
Q 032040 72 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAI 102 (148)
Q Consensus 72 ~~iya~~Tg~~~e~i~~~m~rd~~lta~EA~ 102 (148)
..-+++.+|++...|..+.......+.+...
T Consensus 17 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~ 47 (66)
T 2xi8_A 17 QSELAALLEVSRQTINGIEKNKYNPSLQLAL 47 (66)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSCCCCHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHH
Confidence 3457888899999998888777666666543
Done!