BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032048
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2
SV=1
Length = 350
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 105/122 (86%), Positives = 110/122 (90%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MA +GCKNLVFSSSATVYGWPK VPCTEE P+ A NPYGRTKLFIEEICRDVHRSDSEWK
Sbjct: 116 MAQYGCKNLVFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWK 175
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
IILLRYFNPVGAHPSG IGEDP G+PNNLMP+V QVAVGRRP LTVFGTDY TKDGTGV
Sbjct: 176 IILLRYFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVR 235
Query: 121 CF 122
+
Sbjct: 236 DY 237
>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2
SV=3
Length = 351
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 105/122 (86%), Positives = 110/122 (90%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MA HGCKNLVFSSSATVYG PK VPCTEEFP+ A+NPYGRTKLFIEEICRDV+ SD EWK
Sbjct: 117 MAQHGCKNLVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWK 176
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFG DY+TKDGTGV
Sbjct: 177 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVR 236
Query: 121 CF 122
+
Sbjct: 237 DY 238
>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 350
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 102/122 (83%), Positives = 108/122 (88%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MAAHGCK LVFSSSATVYG PK VPCTEEFPL A NPYGRTKL IEEICRD++R++ EWK
Sbjct: 117 MAAHGCKKLVFSSSATVYGLPKEVPCTEEFPLSAANPYGRTKLIIEEICRDIYRAEQEWK 176
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFG DY+T DGTGV
Sbjct: 177 IILLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGNDYTTSDGTGVR 236
Query: 121 CF 122
+
Sbjct: 237 DY 238
>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1
Length = 350
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MA H CK +VFSSSATVYG P+ +PC E+F L+AMNPYGRTKLF+EEI RD+ +++ EW+
Sbjct: 120 MAKHNCKKMVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWR 179
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
I+LLRYFNPVGAH SGK+GEDPRGIPNNLMP++ QVAVGR PEL V+G DY T+DG+ +
Sbjct: 180 IVLLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIR 239
Query: 121 CF-RTLPLCTCSICECMSCF 139
+ + L I F
Sbjct: 240 DYIHVMDLADGHIAALRKLF 259
>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1
SV=2
Length = 351
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 88/145 (60%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MA + CK +VFSSSATVYG P+ +PC E+F L+AMNPYGRTKLF+EEI RD+ +++ EW+
Sbjct: 121 MAKYNCKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWR 180
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
IILLRYFNPVGAH SG IGEDP+GIPNNLMP++ QVAVGR PEL V+G DY T+DG+ V
Sbjct: 181 IILLRYFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVR 240
Query: 121 CF-RTLPLCTCSICECMSCFWDSFI 144
+ + L I F D I
Sbjct: 241 DYIHVMDLADGHIAALRKLFADPKI 265
>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 354
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
M+ CK LV SSSATVYG P +PC E+ L AMNPYGR+KLF+EE+ RD+ R+++EW+
Sbjct: 124 MSKFNCKKLVISSSATVYGQPDQIPCVEDSNLHAMNPYGRSKLFVEEVARDIQRAEAEWR 183
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
IILLRYFNPVGAH SG+IGEDPRG+PNNLMP++ QVAV R PEL ++G DY TKDGT +
Sbjct: 184 IILLRYFNPVGAHESGQIGEDPRGLPNNLMPYIQQVAVARLPELNIYGHDYPTKDGTAIR 243
Query: 121 CF-RTLPLCTCSICECMSCF 139
+ + L I F
Sbjct: 244 DYIHVMDLADGHIAALRKLF 263
>sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE
PE=3 SV=1
Length = 339
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 81/122 (66%), Positives = 98/122 (80%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
M +G K +VFSSSATVYG P+ P TE+FPL A NPYG+TKL +E+I RD+H +D+EW
Sbjct: 111 MEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLHTADNEWS 170
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
+ LLRYFNP GAHPSG+IGEDP GIPNNLMP+V QVAVG+ +L+VFG DY TKDGTGV
Sbjct: 171 VALLRYFNPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGVR 230
Query: 121 CF 122
+
Sbjct: 231 DY 232
>sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1
SV=1
Length = 344
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 96/122 (78%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
M H K LVFSSSATVYG P VP TE+FPL A NPYGRTKL++E I +D+ SD EW
Sbjct: 116 MDKHRVKKLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWN 175
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
I+LRYFNPVGAHPSG IGEDP+ IPNNLMP+VTQ A+G+RP L++FG DY+T DGTGV
Sbjct: 176 CIMLRYFNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVR 235
Query: 121 CF 122
F
Sbjct: 236 DF 237
>sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1
Length = 347
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 97/123 (78%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
M AHG KNLVFSSSATVYG P+ +P E P NPYG++K FIEE+ RD+ R+D+ W
Sbjct: 118 MRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAW 177
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
+LLRYFNP+GAH SG+IGEDP+GIPNNLMP+V+QVA+GRR L VFG DY+T+DGTGV
Sbjct: 178 NAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV 237
Query: 120 SCF 122
+
Sbjct: 238 RDY 240
>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2
Length = 348
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
M AHG KNLVFSSSATVYG P+ +P E P NPYG++K FIEE+ RD+ ++D W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
+LLRYFNP GAH SG IGEDP+GIPNNLMP+V+QVA+GRR L VFG DY T+DGTGV
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238
Query: 120 SCF 122
+
Sbjct: 239 RDY 241
>sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1
Length = 348
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
M AHG KNLVFSSSATVYG P+ +P E P NPYG++K FIEE+ RD+ ++D W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
+LLRYFNP GAH SG IGEDP+GIPNNLMP+V+QVA+GRR L VFG DY T+DGTGV
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238
Query: 120 SCF 122
+
Sbjct: 239 RDY 241
>sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2
SV=1
Length = 689
Score = 160 bits (405), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/123 (58%), Positives = 91/123 (73%), Gaps = 4/123 (3%)
Query: 1 MAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD 56
M + KN+VFSSSATVYG + ++P E P NPYG TK+ IE I RDV+ +D
Sbjct: 112 MEENNVKNIVFSSSATVYGDATRFENMIPIPEHCPTGPTNPYGETKITIENIIRDVYAND 171
Query: 57 SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDG 116
WK +LRYFNP+GAHPSG IGEDP GIPNNL+PF+ QVA+GRR +L+VFG+DY++KDG
Sbjct: 172 KSWKCAILRYFNPIGAHPSGLIGEDPLGIPNNLLPFLAQVAIGRREKLSVFGSDYNSKDG 231
Query: 117 TGV 119
T +
Sbjct: 232 TPI 234
>sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2
Length = 338
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
M A KNL+FSSSATVYG +P E FP +PYG++KL +E+I D+ ++ EW
Sbjct: 111 MRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEW 170
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR L VFG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGV 230
Query: 120 SCF 122
+
Sbjct: 231 RDY 233
>sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2
Length = 338
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
M A KNL+FSSSATVYG +P E FP +PYG++KL +E+I D+ ++ EW
Sbjct: 111 MRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEW 170
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR L VFG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGV 230
Query: 120 SCF 122
+
Sbjct: 231 RDY 233
>sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1
Length = 338
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
M A KNL+FSSSATVYG +P E FP + +PYGR+KL +E+I +DV +D +W
Sbjct: 111 MRAAQVKNLIFSSSATVYGDQPQIPYVESFPTGSPSSPYGRSKLMVEQILQDVQLADPQW 170
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
+ +LRYFNPVGAHPSG +GEDP+GIPNNLMPF+ QVAVGRR L +FG Y T DGTGV
Sbjct: 171 NMTILRYFNPVGAHPSGLMGEDPQGIPNNLMPFIAQVAVGRRESLAIFGNGYPTPDGTGV 230
Query: 120 SCF 122
+
Sbjct: 231 RDY 233
>sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE
PE=1 SV=1
Length = 338
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
M A KN +FSSSATVYG +P E FP +PYG++KL +E+I D+ ++ +W
Sbjct: 111 MRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 SCF 122
+
Sbjct: 231 RDY 233
>sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=Gale
PE=2 SV=1
Length = 350
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
MA + V+SSSATVYG PK +P TEE P +PYG+TK F EEI +D+ +SD W
Sbjct: 120 MADNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRW 179
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
++ LRYFNPVGAH SG+IGEDP G PNNLMP++ QVAVGRRP L+V+G+D+ T DGTGV
Sbjct: 180 AVVSLRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGV 239
Query: 120 SCF 122
+
Sbjct: 240 RDY 242
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 153 bits (387), Expect = 3e-37, Method: Composition-based stats.
Identities = 69/123 (56%), Positives = 88/123 (71%), Gaps = 4/123 (3%)
Query: 1 MAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD 56
M H K +VFSSSATVYG + ++P E P + NPYG+TK IE I +D+H SD
Sbjct: 116 MREHRVKTVVFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKDLHTSD 175
Query: 57 SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDG 116
+ W+ +LRYFNP+GAHPSG +GEDP GIPNNL+PF+ QVA+GRR +L VFG DY + DG
Sbjct: 176 NTWRGAILRYFNPIGAHPSGLLGEDPLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDG 235
Query: 117 TGV 119
T +
Sbjct: 236 TPI 238
>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GAL10 PE=1 SV=2
Length = 699
Score = 152 bits (383), Expect = 9e-37, Method: Composition-based stats.
Identities = 70/124 (56%), Positives = 87/124 (70%), Gaps = 5/124 (4%)
Query: 1 MAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD 56
M + VFSSSATVYG +P ++P EE PL NPYG TK IE I D++ SD
Sbjct: 122 MQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD 181
Query: 57 SE-WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKD 115
+ WK +LRYFNP+GAHPSG IGEDP GIPNNL+P++ QVAVGRR +L +FG DY ++D
Sbjct: 182 KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRD 241
Query: 116 GTGV 119
GT +
Sbjct: 242 GTPI 245
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 88/121 (72%), Gaps = 4/121 (3%)
Query: 1 MAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD 56
M +H K LVFSSSATVYG + ++P E P NPYG+TKL IE++ RD+H SD
Sbjct: 115 MKSHDVKKLVFSSSATVYGDATRFENMIPIPETCPTGPTNPYGKTKLTIEDMMRDLHFSD 174
Query: 57 SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDG 116
+ +LRYFNP+GAHPSG IGEDP GIPNNL+PF+ QVA+GRRP+L VFG DY + DG
Sbjct: 175 KSFSFAILRYFNPIGAHPSGVIGEDPLGIPNNLLPFMAQVAIGRRPKLYVFGDDYDSVDG 234
Query: 117 T 117
T
Sbjct: 235 T 235
>sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70)
GN=galE PE=3 SV=1
Length = 338
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRDVHRSDSEW 59
M G N VFSSSATVYG P+++P TE + NPYG +K +E+I +D+ ++ E+
Sbjct: 111 MKKAGVWNFVFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEF 170
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
I +LRYFNPVGAH SG IGEDP GIPNNL+P+++QVA+G+ P+L+VFG+DY T DGTGV
Sbjct: 171 SITILRYFNPVGAHESGLIGEDPNGIPNNLLPYISQVAIGKLPQLSVFGSDYETHDGTGV 230
Query: 120 SCF 122
+
Sbjct: 231 RDY 233
>sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1
Length = 347
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 92/124 (74%), Gaps = 4/124 (3%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA--MNPYGRTKLFIEEICRDVHRSDSE 58
M A G K+LVFSSSATVYG P VP + P PYG++K FIEE+ +D+ R+D+
Sbjct: 119 MRAMGVKSLVFSSSATVYGKP--VPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTA 176
Query: 59 WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTG 118
W +LLRYF P+GAH S +IGEDP+GIPNNLMP+V+QVA+GRR L VFG DY+T+DGTG
Sbjct: 177 WNAVLLRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG 236
Query: 119 VSCF 122
V +
Sbjct: 237 VRDY 240
>sp|P56997|GALE_NEIMA UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=galE PE=3 SV=1
Length = 339
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
MA G ++VFSSSATVYG P VP TE+ PL + +PYG +K +E I D+ ++D W
Sbjct: 112 MARAGVFSIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERILTDIQKADPRW 171
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
+ILLRYFNP+GAH SG IGE P GIPNNL+P++ QVA GR P+L+VFG DY T DGTG+
Sbjct: 172 SMILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVASGRLPQLSVFGGDYPTPDGTGM 231
Query: 120 SCF 122
+
Sbjct: 232 RDY 234
>sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=galE PE=3 SV=2
Length = 338
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRDVHRSDSEW 59
M G N VFSSSATVYG PK++P TE+ + NPYG +K +E+I RD +++ ++
Sbjct: 111 MKKAGVWNFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGTSKYMVEQILRDTAKAEPKF 170
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
+ +LRYFNPVGAH SG IGEDP GIPNNL+P+++QVA+G+ +L+VFG+DY T DGTGV
Sbjct: 171 SMTILRYFNPVGAHESGLIGEDPNGIPNNLLPYISQVAIGKLAQLSVFGSDYDTHDGTGV 230
Query: 120 SCF 122
+
Sbjct: 231 RDY 233
>sp|P56986|GALE_NEIMC UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C
GN=galE PE=3 SV=1
Length = 339
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEF-PLEAMNPYGRTKLFIEEICRDVHRSDSEW 59
MA G +VFSSSATVYG P VP TE+ P + +PYG +K +E I D+ ++D W
Sbjct: 112 MARAGVFKIVFSSSATVYGDPGKVPYTEDMQPGDTTSPYGTSKSMVERILSDIQKADPRW 171
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
+ILLRYFNP+GAH SG IGE P GIPNNL+P++ QVA G+ P+L VFG DY T DGTG+
Sbjct: 172 SVILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLAVFGGDYPTPDGTGM 231
Query: 120 SCF 122
+
Sbjct: 232 RDY 234
>sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1
Length = 338
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEF-PLEAMNPYGRTKLFIEEICRDVHRSDSEW 59
MA G +VFSSSATVYG + VP TE+ P + NPYG +K +E + D+ ++D W
Sbjct: 111 MARAGVLKIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPRW 170
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
+ILLRYFNP+GAH SG IGE P G+PNNL+P++ QVA GR P+L+VFG DY T DGTG+
Sbjct: 171 SVILLRYFNPIGAHESGLIGEQPNGVPNNLLPYICQVASGRLPQLSVFGGDYPTPDGTGM 230
Query: 120 SCF 122
+
Sbjct: 231 RDY 233
>sp|P56985|GALE_NEIMB UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=galE PE=3 SV=1
Length = 339
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFP-LEAMNPYGRTKLFIEEICRDVHRSDSEW 59
MA G ++VFSSSATVYG P VP TE+ P + +PYG +K +E I D+ ++D W
Sbjct: 112 MARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERILTDIQKADPRW 171
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
+ILLRYFNP+GAH SG IGE P GIPNNL+P++ QVA G+ P+L VFG DY T DGTG+
Sbjct: 172 SMILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLAVFGDDYPTPDGTGM 231
Query: 120 SCF 122
+
Sbjct: 232 RDY 234
>sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1
Length = 337
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRDVHRSDSEW 59
M + G +FSSSATVYG VP E P+ +PYG +KL +E+I RD +++ E+
Sbjct: 111 MRSAGVNQFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEF 170
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
K I LRYFNPVGAH SG++GEDP GIPNNL+P++ QVA+GR +L +FG DY T+DGTGV
Sbjct: 171 KTIALRYFNPVGAHESGQMGEDPNGIPNNLLPYIAQVAIGRLEKLGIFGDDYPTEDGTGV 230
Query: 120 SCF 122
+
Sbjct: 231 RDY 233
>sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3
SV=1
Length = 338
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRDVHRSDSEW 59
M +VFSSSATVYG P+++P E P+ NPYG +K +E I D ++ +
Sbjct: 111 MLKANVNTIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILEDTVKAFPQL 170
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
++LRYFN VGAH SG IGEDP GIPNNLMPF++QVAVG+ P+L+VFG DY+T DGTGV
Sbjct: 171 SAVVLRYFNRVGAHESGLIGEDPNGIPNNLMPFISQVAVGKLPQLSVFGGDYNTHDGTGV 230
Query: 120 SCF 122
+
Sbjct: 231 RDY 233
>sp|Q9Y7X5|UGE1_SCHPO UDP-glucose 4-epimerase uge1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=uge1 PE=1 SV=1
Length = 355
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 90/152 (59%), Gaps = 10/152 (6%)
Query: 1 MAAHGCKNLVFSSSATVYGWPK----VVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD 56
M + ++ VFSSSATVYG P +P E P E +PYGRTKLFIE I D + +
Sbjct: 117 MKKYNVRDFVFSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETKVN 176
Query: 57 SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDG 116
LLRYFNP GAHPSG++GEDP GIPNNL+P++ QVAVGR L VFG DY T DG
Sbjct: 177 KSLNAALLRYFNPGGAHPSGELGEDPLGIPNNLLPYIAQVAVGRLDHLNVFGDDYPTSDG 236
Query: 117 TGVSCFRTLPLCTCSICECMSCFWDSFILMQH 148
T + + + C + E D L QH
Sbjct: 237 TPIRDY----IHVCDLAEAHVAALD--YLRQH 262
>sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3
SV=1
Length = 336
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 85/118 (72%), Gaps = 1/118 (0%)
Query: 6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRDVHRSDSEWKIILL 64
K L+FSSSATVYG P+ VP TE+ + NPYG +K+ +E+I +D + ++ I L
Sbjct: 116 VKKLIFSSSATVYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKDFSLAHPDYSITAL 175
Query: 65 RYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVSCF 122
RYFNPVGAHPSG IGEDP G PNNL+PF+TQVA+G+ +L V+G DY T DG+G+ +
Sbjct: 176 RYFNPVGAHPSGLIGEDPNGKPNNLLPFITQVAIGKLSKLLVYGNDYDTPDGSGIRDY 233
>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1
Length = 331
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW- 59
M G K +VFSS+A YG PK VP E P NPYG +KL +E+I +H +D +
Sbjct: 104 MNQFGIKKIVFSSTAATYGEPKQVPIKETDPQVPTNPYGESKLAMEKI---MHWADVAYG 160
Query: 60 -KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTG 118
K + LRYFN GA P G IGED +++P + QVA G R L ++G DY TKDGT
Sbjct: 161 LKFVALRYFNVAGAMPDGSIGEDHHP-ETHIVPIILQVAAGTRTGLQIYGDDYPTKDGTN 219
Query: 119 VSCF 122
V +
Sbjct: 220 VRDY 223
>sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=galE PE=3
SV=1
Length = 334
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 11/126 (8%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEI---CRDVHRSDS 57
M H K +VFSS+A YG P +P E P NPYG TKL IE++ C++ +
Sbjct: 103 MLEHDVKKIVFSSTAATYGEPVQIPIQESDPTIPTNPYGETKLAIEKMFHWCQEAYG--- 159
Query: 58 EWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
+ + LRYFN GA P+G+IGED ++L+P V QVA+G+R + +FG DY T+DG
Sbjct: 160 -LQYVCLRYFNAAGADPNGRIGED-HSPESHLIPIVLQVALGQRERVAIFGDDYQTEDG- 216
Query: 118 GVSCFR 123
SC R
Sbjct: 217 --SCIR 220
>sp|Q59083|EXOB_AZOBR UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3
SV=1
Length = 348
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Query: 5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILL 64
G +VFSS+A VYG P+ VP E+ P +NPYG +KL E++ RD + + ++L
Sbjct: 116 GIDKVVFSSTAAVYGAPESVPIREDAPTVPINPYGASKLMTEQMLRDAGAAHG-LRSVIL 174
Query: 65 RYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVSCFR 123
RYFN GA P+G+ G+ + +L+ Q +GRRP L +FGTDY T DGT C R
Sbjct: 175 RYFNVAGADPAGRTGQ-ATPVATHLIKVACQALLGRRPPLAIFGTDYDTPDGT---CIR 229
>sp|Q7WTB1|GALE_LACHE UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2
SV=1
Length = 330
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
M K LVFSSSA YG PK +P TE+ PL +NPYG TK+ +E+I ++D K
Sbjct: 104 MNDANVKYLVFSSSAATYGIPKKLPITEDTPLNPINPYGETKMMMEKIMAWADKADG-IK 162
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
LRYFN GA G IGED +L+P + + A+ + T+FG DY TKDGT V
Sbjct: 163 YTALRYFNVAGASSDGSIGED-HAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVR 221
Query: 121 CF 122
+
Sbjct: 222 DY 223
>sp|P96995|GALE_STRMU UDP-glucose 4-epimerase OS=Streptococcus mutans serotype c (strain
ATCC 700610 / UA159) GN=galE PE=3 SV=2
Length = 333
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
M+ G K +VFSS+A YG P +P E P +NPYG +KL +E I + R+ K
Sbjct: 106 MSEFGVKYIVFSSTAATYGIPDEIPIKETTPQRPINPYGESKLMMETIMKWSDRAYG-IK 164
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
+ LRYFN GA P G IGED +L+P + QVA G R ++ +FG DY+T DGT V
Sbjct: 165 FVPLRYFNVAGAKPDGSIGED-HSPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVR 223
Query: 121 CF 122
+
Sbjct: 224 DY 225
>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1
SV=1
Length = 419
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MAAHG K L++SS+ YG P ++P TEE P +NPYG+ K E+I D + +S+
Sbjct: 183 MAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSK-NSDMA 241
Query: 61 IILLRYFNPVGAHPSGKIGEDPR---GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
+++LRYFN +G+ P G++GE PR + A G P L + GTDY T DGT
Sbjct: 242 VMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGT 301
>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=galE PE=3 SV=2
Length = 329
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
M AHG NLVFSS+A YG P VVP TE+ P + N YG TKL I+ + +
Sbjct: 102 MRAHGVNNLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITS-YAAAFGLA 160
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVS 120
LRYFN GA+ G IGE+ R + +L+P V QVA G R + +FG D+ T DGT V
Sbjct: 161 ATSLRYFNVAGAY--GNIGEN-REVETHLIPLVLQVATGHREKTFMFGDDWPTPDGTAVR 217
Query: 121 CF-RTLPLCTCSICECMS 137
+ L L + S
Sbjct: 218 DYIHILDLAKAHVLALES 235
>sp|O64749|ARAE2_ARATH Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana
GN=At2g34850 PE=2 SV=3
Length = 417
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MAAHG K L++SS+ YG P+ +P TEE P +NPYG+ K E+I D + +S
Sbjct: 182 MAAHGVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFSK-NSIMA 240
Query: 61 IILLRYFNPVGAHPSGKIGEDPR---GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
+++LRYFN +G+ P G++GE PR + A G P L + GTDY T DGT
Sbjct: 241 VMILRYFNVIGSDPEGRLGEAPRPELSEHGRISGACFDAARGIIPGLQIKGTDYKTVDGT 300
>sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp.
japonica GN=UEL-2 PE=2 SV=1
Length = 391
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MAA+ K L++SS+ YG P +P TE P +NPYG+ K E+I D + SE
Sbjct: 162 MAAYNVKTLIYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILDFSKR-SEMA 220
Query: 61 IILLRYFNPVGAHPSGKIGEDPR---GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
+++LRYFN +G+ P G++GE PR + A+G P L V GTDY T DGT
Sbjct: 221 VMILRYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGT 280
Query: 118 GVSCFR 123
C R
Sbjct: 281 ---CIR 283
>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2
Length = 328
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIE-EICRDVHRSDSEW 59
M + +N+VFSS+A YG P+ VP TE+ P NPYG TKL I+ I H +
Sbjct: 102 MKRNNVRNIVFSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYG--F 159
Query: 60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
LRYFN GA+ G +GE+ R I +L+P V QVA+G R ++ +FG D+ T+DGT
Sbjct: 160 AATSLRYFNVAGAY--GLVGEN-REIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGT 214
>sp|Q9FI17|ARAE4_ARATH Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana
GN=At5g44480 PE=3 SV=1
Length = 436
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MA H K L++SS+ YG P+ +P TE+ P +NPYG+ K E++ D + +S+
Sbjct: 207 MARHKVKKLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSK-NSDMA 265
Query: 61 IILLRYFNPVGAHPSGKIGEDPR---GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
+++LRYFN +G+ P G++GE PR + A G P L V GTDY T DGT
Sbjct: 266 VMILRYFNVIGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSDGT 325
Query: 118 GVSCFR 123
C R
Sbjct: 326 ---CIR 328
>sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp.
japonica GN=UEL-3 PE=2 SV=1
Length = 406
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
MA+HG K L++SS+ YG P+ +P E +NPYG+ K E+I D + +
Sbjct: 176 MASHGVKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMA 235
Query: 61 IILLRYFNPVGAHPSGKIGEDPR---GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
+++LRYFN +G+ P G++GE PR + A+G P L V GTDY T DGT
Sbjct: 236 VMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGT 295
Query: 118 GVSCFR 123
C R
Sbjct: 296 ---CIR 298
>sp|Q8H930|ARAE1_ORYSJ Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp.
japonica GN=UEL-1 PE=2 SV=2
Length = 421
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS-DSEW 59
MAAH + L++SS+ YG P+ +P TE P +NPYG+ K E+I D +S ++
Sbjct: 185 MAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADM 244
Query: 60 KIILLRYFNPVGAHPSGKIGEDPR---GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDG 116
+++LRYFN +G+ P G++GE P+ + A+G P L V GTDY T DG
Sbjct: 245 AVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYETPDG 304
Query: 117 TGVSCF 122
T V +
Sbjct: 305 TCVRDY 310
>sp|Q59745|EXOB_RHILT UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii
GN=exoB PE=3 SV=1
Length = 327
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKII 62
A G VFSS+ YG P+ VP E +NPYGRTK +E+ D + S + +
Sbjct: 108 AAGINAFVFSSTCATYGLPQSVPLDETHRQVPINPYGRTKYIVEQALADYDQYGS-LRSV 166
Query: 63 LLRYFNPVGAHPSGKIGE--DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
+LRYFN GA G+IGE P + +P A+GRR VFG+DY T+DGT
Sbjct: 167 VLRYFNAAGADFEGRIGEWHQPE---THAIPLAIDAALGRRQGFKVFGSDYETRDGT 220
>sp|P26503|EXOB_RHIME UDP-glucose 4-epimerase OS=Rhizobium meliloti (strain 1021) GN=exoB
PE=3 SV=1
Length = 328
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILL 64
G VFSS+ YG P VP E +NPYGRTK E+ +D + ++L
Sbjct: 110 GIDAFVFSSTCATYGLPDSVPMDESHKQAPINPYGRTKWICEQALKDYGLYKG-LRSVIL 168
Query: 65 RYFNPVGAHPSGKIGE--DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
RYFN GA G+IGE +P + +P A+GRR VFGTDY T+DGT
Sbjct: 169 RYFNAAGADFEGRIGEWHEPE---THAIPLAIDAALGRREGFKVFGTDYDTRDGT 220
>sp|P21977|GALE_STRTR UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3
SV=1
Length = 332
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW--KII 62
G K +VFSS+A YG P+ +P E P +NPYG +KL +E I + SD + K +
Sbjct: 110 GVKYIVFSSTAATYGIPEEIPILETTPQNPINPYGESKLMMETIMK---WSDQAYGIKYV 166
Query: 63 LLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVSCF 122
LRYFN GA+ ++ +L+P + QVA G R ++ +FG DY+T DGT V +
Sbjct: 167 PLRYFNVAGANLMVRLVRTRS--ETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRDY 224
>sp|Q9SUN3|ARAE3_ARATH Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana
GN=At4g20460 PE=2 SV=3
Length = 411
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
+A H K L++SS+ YG P +P E P +NPYG+ K E++ D + +S+
Sbjct: 182 VARHKVKKLIYSSTCATYGEPDKMPIVEVTPQVPINPYGKAKKMAEDMILDFSK-NSDMA 240
Query: 61 IILLRYFNPVGAHPSGKIGEDPR---GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
+++LRYFN +G+ P G++GE P+ + A G P L V GTDY T DGT
Sbjct: 241 VMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAARGVIPGLQVKGTDYKTGDGT 300
>sp|P13226|GALE_STRLI UDP-glucose 4-epimerase OS=Streptomyces lividans GN=galE PE=3 SV=2
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
M G + LVFSS+A YG P+ VP E P NPYG +KL ++ + +
Sbjct: 107 MRGAGVRRLVFSSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITG-EAAAHGLG 165
Query: 61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKD 115
+ + YFN GA+ ++ DP ++L+P V QVA GRR ++V+G DY T D
Sbjct: 166 AVSVPYFNVAGANRGVRLVHDPE---SHLIPLVLQVAQGRREAISVYGDDYPTPD 217
>sp|P75517|GALE_MYCPN UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae (strain ATCC 29342
/ M129) GN=galE PE=3 SV=1
Length = 338
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 8 NLVFSSSATVYGWPKVVPCTEEFPLE---AMNPYGRTKLFIEEICRDVHRSDSEWKIILL 64
L FSS+A V+G +P E LE A NPYG +K E + + + RS +++I L
Sbjct: 120 QLFFSSTAAVFGSASTLPIPENLVLEETLASNPYGISKFLSEIVLQTLTRS-PHFQVIAL 178
Query: 65 RYFNPVGA-HPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVSCFR 123
RYFN GA +P G ++ + NL+ A + ++G DY TKDG SC R
Sbjct: 179 RYFNVAGASNPFGNFNKNTTLLIPNLIK-----AFMEKRTFFLYGDDYDTKDG---SCIR 230
Query: 124 TLPLCTCSICECMSCFW 140
+ +C+ W
Sbjct: 231 DY-IHVVDLCDAHLLAW 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,964,701
Number of Sequences: 539616
Number of extensions: 2527195
Number of successful extensions: 6110
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 5993
Number of HSP's gapped (non-prelim): 79
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)