Your job contains 1 sequence.
>032052
MVTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGAS
SSGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAVKA
ELEEVRVKVLQRLKHIEEDEFVTSLLNC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032052
(148 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2047304 - symbol:AGL61 "AGAMOUS-like 61" speci... 171 5.6e-13 1
TAIR|locus:2040819 - symbol:AGL29 "AGAMOUS-like 29" speci... 159 1.0e-11 1
TAIR|locus:2103415 - symbol:AGL91 "AGAMOUS-like 91" speci... 159 1.0e-11 1
TAIR|locus:4010713489 - symbol:AGL64 "AGAMOUS-like 64" sp... 150 9.4e-11 1
TAIR|locus:2175188 - symbol:AGL62 "AGAMOUS-like 62" speci... 153 1.2e-10 1
TAIR|locus:2032537 - symbol:AGL59 "AGAMOUS-like 59" speci... 144 4.1e-10 1
TAIR|locus:2206320 - symbol:AGL23 "AGAMOUS-like 23" speci... 142 6.6e-10 1
UNIPROTKB|Q6Q9I2 - symbol:MADS15 "MADS-box transcription ... 114 6.7e-10 2
UNIPROTKB|Q5K4R0 - symbol:MADS47 "MADS-box transcription ... 120 7.6e-10 2
TAIR|locus:2202420 - symbol:AGL102 "AGAMOUS-like 102" spe... 139 1.4e-09 1
TAIR|locus:2115420 - symbol:AT4G36590 species:3702 "Arabi... 137 4.2e-09 1
TAIR|locus:2025386 - symbol:AGL28 "AGAMOUS-like 28" speci... 133 1.2e-08 1
TAIR|locus:2102990 - symbol:AGL57 "AGAMOUS-like 57" speci... 109 1.7e-08 2
TAIR|locus:2082618 - symbol:AGL16 "AGAMOUS-like 16" speci... 129 3.1e-08 1
TAIR|locus:2032543 - symbol:AGL58 "AGAMOUS-like 58" speci... 125 4.2e-08 1
TAIR|locus:2195798 - symbol:AT1G17310 species:3702 "Arabi... 126 4.5e-08 1
UNIPROTKB|Q7XUN2 - symbol:MADS17 "MADS-box transcription ... 125 9.9e-08 1
UNIPROTKB|Q10CQ1 - symbol:MADS14 "MADS-box transcription ... 106 1.1e-07 2
TAIR|locus:2121070 - symbol:AGL21 "AT4G37940" species:370... 121 2.1e-07 1
POMBASE|SPAC11E3.06 - symbol:map1 "MADS-box transcription... 108 2.9e-07 2
UNIPROTKB|Q9XJ66 - symbol:MADS22 "MADS-box transcription ... 118 4.7e-07 1
TAIR|locus:2824536 - symbol:AGL12 "AGAMOUS-like 12" speci... 116 6.0e-07 1
UNIPROTKB|Q9ATE9 - symbol:FBP20 "MADS-box transcription f... 116 6.5e-07 1
UNIPROTKB|Q40885 - symbol:AG1 "Floral homeotic protein AG... 117 7.3e-07 1
TAIR|locus:2165386 - symbol:AGL72 "AGAMOUS-like 72" speci... 106 8.4e-07 2
UNIPROTKB|Q9ATE5 - symbol:FBP24 "MADS-box protein FBP24" ... 117 9.6e-07 1
TAIR|locus:2193922 - symbol:AT1G72350 species:3702 "Arabi... 115 9.8e-07 1
TAIR|locus:2005522 - symbol:AGL20 "AT2G45660" species:370... 114 1.1e-06 1
TAIR|locus:2102871 - symbol:AGL79 "AGAMOUS-like 79" speci... 115 1.3e-06 1
UNIPROTKB|Q9ZS29 - symbol:GAGA2 "MADS-box protein, GAGA2"... 114 1.7e-06 1
TAIR|locus:2127213 - symbol:AGL19 "AGAMOUS-like 19" speci... 112 2.0e-06 1
UNIPROTKB|Q43616 - symbol:fbp7 "Floral binding protein nu... 111 2.8e-06 1
TAIR|locus:2043600 - symbol:AGL6 "AT2G45650" species:3702... 112 3.0e-06 1
TAIR|locus:2166766 - symbol:TT16 "TRANSPARENT TESTA16" sp... 111 3.9e-06 1
SGD|S000004646 - symbol:MCM1 "Transcription factor involv... 112 4.0e-06 1
TAIR|locus:2121924 - symbol:AGL24 "AT4G24540" species:370... 109 4.5e-06 1
TAIR|locus:2057741 - symbol:AGL33 "AGAMOUS-like 33" speci... 105 5.5e-06 1
UNIPROTKB|Q9ZS30 - symbol:gaga1 "MADS-box protein, GAGA1"... 110 5.6e-06 1
TAIR|locus:2177125 - symbol:AGL15 "AGAMOUS-like 15" speci... 110 5.8e-06 1
TAIR|locus:2082613 - symbol:AGL18 "AGAMOUS-like 18" speci... 109 6.7e-06 1
DICTYBASE|DDB_G0282835 - symbol:srfB "putative MADS-box t... 112 9.4e-06 1
UNIPROTKB|Q2QW53 - symbol:MADS13 "MADS-box transcription ... 108 9.8e-06 1
TAIR|locus:2041233 - symbol:SVP "AT2G22540" species:3702 ... 107 1.9e-05 1
UNIPROTKB|Q0D4T4 - symbol:MADS18 "MADS-box transcription ... 102 2.1e-05 2
TAIR|locus:2199444 - symbol:AGL85 "AGAMOUS-like 85" speci... 104 3.0e-05 1
UNIPROTKB|D6RB91 - symbol:MEF2C "Myocyte-specific enhance... 98 3.0e-05 1
TAIR|locus:2149264 - symbol:PI "PISTILLATA" species:3702 ... 106 3.3e-05 1
WB|WBGene00006844 - symbol:unc-120 species:6239 "Caenorha... 107 3.7e-05 1
TAIR|locus:2177749 - symbol:AGL31 "AGAMOUS-like 31" speci... 105 4.4e-05 1
UNIPROTKB|Q6EU39 - symbol:MADS6 "MADS-box transcription f... 106 5.5e-05 1
UNIPROTKB|Q9ATE3 - symbol:FBP28 "MADS-box transcription f... 105 6.0e-05 1
TAIR|locus:2066050 - symbol:AGL17 "AGAMOUS-like 17" speci... 105 6.9e-05 1
TAIR|locus:2042182 - symbol:AGL44 "AGAMOUS-like 44" speci... 105 7.5e-05 1
UNIPROTKB|D2T2G0 - symbol:gsqua2 "GSQUA2 protein" species... 105 7.9e-05 1
SGD|S000004645 - symbol:ARG80 "Transcription factor invol... 103 8.0e-05 1
UNIPROTKB|H0YKY6 - symbol:MEF2A "Myocyte-specific enhance... 94 8.1e-05 1
UNIPROTKB|H0YM62 - symbol:MEF2A "Myocyte-specific enhance... 94 8.1e-05 1
UNIPROTKB|I3L7L3 - symbol:LOC100738718 "Uncharacterized p... 94 8.1e-05 1
UNIPROTKB|D6RG14 - symbol:MEF2C "Myocyte-specific enhance... 93 0.00010 1
UNIPROTKB|D6RG21 - symbol:MEF2C "Myocyte-specific enhance... 93 0.00010 1
UNIPROTKB|D6RJA7 - symbol:MEF2C "Myocyte-specific enhance... 93 0.00010 1
UNIPROTKB|Q9ZS26 - symbol:gglo1 "MADS-box protein, GGLO1"... 103 0.00012 1
UNIPROTKB|D6RCM6 - symbol:MEF2C "Myocyte-specific enhance... 93 0.00013 1
TAIR|locus:2173522 - symbol:AGL8 "AGAMOUS-like 8" species... 99 0.00013 2
TAIR|locus:505006709 - symbol:AGL42 "AGAMOUS-like 42" spe... 103 0.00015 1
TAIR|locus:2098826 - symbol:AGL13 "AGAMOUS-like 13" speci... 104 0.00015 1
TAIR|locus:2140578 - symbol:STK "AT4G09960" species:3702 ... 104 0.00017 1
TAIR|locus:2137070 - symbol:AGL14 "AGAMOUS-like 14" speci... 103 0.00017 1
CGD|CAL0001975 - symbol:MCM1 species:5476 "Candida albica... 104 0.00018 1
UNIPROTKB|Q5AFP3 - symbol:MCM1 "Transcription factor of m... 104 0.00018 1
UNIPROTKB|Q40882 - symbol:fbp11 "Fbp11 protein" species:4... 103 0.00019 1
UNIPROTKB|D2T2F9 - symbol:grcd5 "GRCD5 protein" species:1... 103 0.00024 1
TAIR|locus:2029411 - symbol:AGL67 "AGAMOUS-like 67" speci... 89 0.00025 2
TAIR|locus:2028830 - symbol:CAL "CAULIFLOWER" species:370... 103 0.00025 1
UNIPROTKB|Q9ZS25 - symbol:gsqua1 "MADS-box protein, GSQUA... 100 0.00050 1
UNIPROTKB|D2T2F8 - symbol:grcd4 "GRCD4 protein" species:1... 101 0.00054 1
TAIR|locus:2044259 - symbol:SEP4 "SEPALLATA 4" species:37... 101 0.00058 1
TAIR|locus:2157874 - symbol:AGL83 "AGAMOUS-like 83" speci... 101 0.00071 1
UNIPROTKB|A2ICN5 - symbol:MEF2A "Myocyte-specific enhance... 103 0.00079 1
DICTYBASE|DDB_G0281387 - symbol:srfA "SRF-related protein... 102 0.00086 1
>TAIR|locus:2047304 [details] [associations]
symbol:AGL61 "AGAMOUS-like 61" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009559 "embryo sac central cell
differentiation" evidence=IMP] [GO:0043078 "polar nucleus"
evidence=IDA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0019722 "calcium-mediated signaling"
evidence=RCA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC006585 EMBL:DQ056542
EMBL:EU836691 IPI:IPI00545091 PIR:B84641 RefSeq:NP_850058.1
UniGene:At.52900 ProteinModelPortal:Q4PSU4 SMR:Q4PSU4 IntAct:Q4PSU4
STRING:Q4PSU4 EnsemblPlants:AT2G24840.1 GeneID:817021
KEGG:ath:AT2G24840 GeneFarm:3717 TAIR:At2g24840 eggNOG:NOG244091
HOGENOM:HOG000238700 InParanoid:Q4PSU4 OMA:AASCELN PhylomeDB:Q4PSU4
ProtClustDB:CLSN2918089 ArrayExpress:Q4PSU4 Genevestigator:Q4PSU4
GO:GO:0043078 GO:GO:0009559 Uniprot:Q4PSU4
Length = 264
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 46/146 (31%), Positives = 75/146 (51%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GLFKKA E + G++I ++VFSPA P+ G PS ++V+D+++S N + +
Sbjct: 80 VTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYVSRNNMSLA 139
Query: 62 SGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAVKAE 121
Q + A C +L E +G A+E+ K ++ +
Sbjct: 140 QSQQ-LQGSPAASCELNMQLTHILSEVEEEKK--KG--QAMEEMRKESVRRSMINWWEKP 194
Query: 122 LEEVRVKVLQRLKHIEEDEFVTSLLN 147
+EE+ + LQ +K+ E+ T + N
Sbjct: 195 VEEMNMVQLQEMKYALEELRKTVVTN 220
>TAIR|locus:2040819 [details] [associations]
symbol:AGL29 "AGAMOUS-like 29" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:AC004077
EMBL:AC004481 EMBL:DQ446598 IPI:IPI00526479 PIR:T02331
RefSeq:NP_180991.1 UniGene:At.37804 ProteinModelPortal:O64703
SMR:O64703 EnsemblPlants:AT2G34440.1 GeneID:818007
KEGG:ath:AT2G34440 TAIR:At2g34440 InParanoid:O64703 OMA:QASSCLM
PhylomeDB:O64703 ProtClustDB:CLSN2683539 ArrayExpress:O64703
Genevestigator:O64703 Uniprot:O64703
Length = 172
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 43/133 (32%), Positives = 67/133 (50%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GLFKKA E A + +++ ++VFSP G P+ +G P+ D+V ++F+ + S
Sbjct: 19 VTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPNLDSVAERFMREYDDSDS 78
Query: 62 SGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAVKAE 121
+ + + + R L L N EA+ RG E ++ SA D K
Sbjct: 79 GDEEKSGNYRPKLKRLSE--RLDLLNQEVEAEKERG-----EKSQEKLESAGD-ERFKES 130
Query: 122 LEEVRVKVLQRLK 134
+E + + L K
Sbjct: 131 IETLTLDELNEYK 143
>TAIR|locus:2103415 [details] [associations]
symbol:AGL91 "AGAMOUS-like 91" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC036106 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 HOGENOM:HOG000238700
ProtClustDB:CLSN2683539 EMBL:DQ056634 IPI:IPI00548671
RefSeq:NP_187320.1 UniGene:At.64985 ProteinModelPortal:Q9C836
SMR:Q9C836 EnsemblPlants:AT3G66656.1 GeneID:819848
KEGG:ath:AT3G66656 TAIR:At3g66656 InParanoid:Q9C836 OMA:QEKKICK
PhylomeDB:Q9C836 Genevestigator:Q9C836 Uniprot:Q9C836
Length = 178
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 43/159 (27%), Positives = 77/159 (48%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSV-----N 56
VTFSKRR GLFKKA E A + +++ ++VFSP PY G P+FD + ++F +
Sbjct: 19 VTFSKRRLGLFKKASELATLCNAEVGIVVFSPGNKPYSFGKPNFDVIAERFKNEFEEEEE 78
Query: 57 GGA-SSSGQVGAHH--NEADVCRTPTPF--HLVLQNHHNEADVCRGFLMALEDKIKRC-- 109
G + +SG + E +C+ + H E D+ + A +DK +
Sbjct: 79 GDSCETSGYSRGNRARQEKKICKRLNSITEEAEAEKKHGE-DLHKWLESAEQDKFNKPIE 137
Query: 110 -RSAEDLSAVKAELEEVRVKVLQRLKHIEEDEFVTSLLN 147
+ E+L +A+++++ + + H++ + L N
Sbjct: 138 ELTLEELKEFEAKIKKISCGIQSNISHMQASSSLMFLSN 176
>TAIR|locus:4010713489 [details] [associations]
symbol:AGL64 "AGAMOUS-like 64" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455
HSSP:P11831 HOGENOM:HOG000238700 EMBL:AY141244 IPI:IPI00852269
RefSeq:NP_001077625.1 UniGene:At.40641 ProteinModelPortal:Q7XJK9
SMR:Q7XJK9 IntAct:Q7XJK9 STRING:Q7XJK9 EnsemblPlants:AT1G29962.1
GeneID:5007741 KEGG:ath:AT1G29962 TAIR:At1g29962 eggNOG:NOG321251
OMA:NEDAWWK PhylomeDB:Q7XJK9 ProtClustDB:CLSN2679626
Genevestigator:Q7XJK9 Uniprot:Q7XJK9
Length = 185
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 1 MVTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGAS 60
+VT SKRR G++ K E + + G+++A L +S +G PY GSPSF AV ++FL NG AS
Sbjct: 24 LVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKPYTFGSPSFQAVAERFL--NGEAS 81
Query: 61 SS 62
SS
Sbjct: 82 SS 83
>TAIR|locus:2175188 [details] [associations]
symbol:AGL62 "AGAMOUS-like 62" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009960 "endosperm
development" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
HOGENOM:HOG000238700 EMBL:AY141236 EMBL:EU493093 EMBL:AB011483
IPI:IPI00517886 IPI:IPI00520610 RefSeq:NP_200852.1 UniGene:At.29160
ProteinModelPortal:Q9FKK2 SMR:Q9FKK2 IntAct:Q9FKK2 STRING:Q9FKK2
EnsemblPlants:AT5G60440.1 GeneID:836165 KEGG:ath:AT5G60440
GeneFarm:3728 TAIR:At5g60440 eggNOG:NOG311592 InParanoid:Q9FKK2
OMA:NISEYEH PhylomeDB:Q9FKK2 ProtClustDB:CLSN2916398
Genevestigator:Q9FKK2 GO:GO:0009960 Uniprot:Q9FKK2
Length = 299
Score = 153 (58.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTFSKRR GLFKKA E + G+++A++VFSP + G P+ D+VID+F++ N
Sbjct: 24 VTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFINNN 78
>TAIR|locus:2032537 [details] [associations]
symbol:AGL59 "AGAMOUS-like 59" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
HOGENOM:HOG000238700 eggNOG:KOG0014 EMBL:AC010155
ProtClustDB:CLSN2679626 IPI:IPI00522494 PIR:G86410
RefSeq:NP_174168.1 UniGene:At.51805 ProteinModelPortal:Q9SGP4
SMR:Q9SGP4 EnsemblPlants:AT1G28460.1 GeneID:839745
KEGG:ath:AT1G28460 TAIR:At1g28460 InParanoid:Q9SGP4 OMA:CEQAASR
PhylomeDB:Q9SGP4 Genevestigator:Q9SGP4 Uniprot:Q9SGP4
Length = 182
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 29/74 (39%), Positives = 47/74 (63%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKR G++ K E + + G ++A + +S +G PY GSPSF AV ++FL+ + +SS
Sbjct: 25 VTFSKRLNGIYTKISELSILCGVEVAFIGYSCSGKPYTFGSPSFQAVAERFLNGDASSSS 84
Query: 62 SGQVGAH-HNEADV 74
S + + H +A +
Sbjct: 85 SSSLVMNAHKQAKI 98
>TAIR|locus:2206320 [details] [associations]
symbol:AGL23 "AGAMOUS-like 23" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009553 "embryo
sac development" evidence=IMP] [GO:0009658 "chloroplast
organization" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004512 GO:GO:0009658 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:Q02078 HOGENOM:HOG000238700 GO:GO:0009553
EMBL:AY141230 IPI:IPI00536845 PIR:T02359 RefSeq:NP_176715.1
UniGene:At.35891 ProteinModelPortal:O80807 SMR:O80807 IntAct:O80807
STRING:O80807 EnsemblPlants:AT1G65360.1 GeneID:842846
KEGG:ath:AT1G65360 TAIR:At1g65360 InParanoid:O80807 OMA:QNERENE
PhylomeDB:O80807 ProtClustDB:CLSN2679619 ArrayExpress:O80807
Genevestigator:O80807 Uniprot:O80807
Length = 226
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKR+ GLFKKA E+ + ++IA++VFSPAG + G P+ D ++D F
Sbjct: 24 VTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHF 74
>UNIPROTKB|Q6Q9I2 [details] [associations]
symbol:MADS15 "MADS-box transcription factor 15"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AP003759 EMBL:AP004342
ProtClustDB:CLSN2694303 EMBL:AF058698 EMBL:AB003325 EMBL:AF345911
EMBL:AY551920 RefSeq:NP_001058720.1 UniGene:Os.12750
ProteinModelPortal:Q6Q9I2 IntAct:Q6Q9I2
EnsemblPlants:LOC_Os07g01820.3 GeneID:4342214
KEGG:dosa:Os07t0108900-01 KEGG:osa:4342214 Gramene:Q6Q9I2
Uniprot:Q6Q9I2
Length = 267
Score = 114 (45.2 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS-FDAVIDKF 52
VTFSKRR GL KKA E + + +++A +VFSP G Y + + S D +++++
Sbjct: 19 VTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERY 70
Score = 50 (22.7 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 83 LVLQNHHNEADVCRGF--LMALEDKIKRCRS---AEDLSAVKA-ELEEVRVKVLQRLKHI 136
L+ +E + C + L A + I++C EDL ++ EL+++ ++ LKHI
Sbjct: 80 LISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHI 139
>UNIPROTKB|Q5K4R0 [details] [associations]
symbol:MADS47 "MADS-box transcription factor 47"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009742 "brassinosteroid mediated signaling
pathway" evidence=IMP] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0009742
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009910 GO:GO:0010582
GO:GO:0048438 GO:GO:0010076 GO:GO:0009266 GO:GO:0000900
EMBL:AY345221 EMBL:AY345222 EMBL:AJ536158 EMBL:AC125471
EMBL:AJ293816 RefSeq:NP_001049203.2 UniGene:Os.22281
ProteinModelPortal:Q5K4R0 IntAct:Q5K4R0 GeneID:4331872
KEGG:osa:4331872 Gramene:Q5K4R0 Uniprot:Q5K4R0
Length = 246
Score = 120 (47.3 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLS 54
VTFSKRR+GLFKKA+E + + +++ ++VFS G + S S + +ID++ S
Sbjct: 38 VTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRYNS 90
Score = 41 (19.5 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 103 EDKIKRCRSAEDLSAVKAELEEVRVKVLQRLKHIEEDEFVTSL 145
ED R E+L+ L ++R + L RL + E SL
Sbjct: 108 EDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSL 150
>TAIR|locus:2202420 [details] [associations]
symbol:AGL102 "AGAMOUS-like 102" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066
SMART:SM00432 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11746 EMBL:AC012463 EMBL:AY141241
IPI:IPI00548327 RefSeq:NP_175207.1 UniGene:At.38560
ProteinModelPortal:Q9FZF2 SMR:Q9FZF2 IntAct:Q9FZF2 STRING:Q9FZF2
EnsemblPlants:AT1G47760.1 GeneID:841187 KEGG:ath:AT1G47760
TAIR:At1g47760 HOGENOM:HOG000152598 InParanoid:Q9FZF2 OMA:VVERIQN
PhylomeDB:Q9FZF2 ProtClustDB:CLSN2914527 Genevestigator:Q9FZF2
Uniprot:Q9FZF2
Length = 184
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/146 (33%), Positives = 78/146 (53%)
Query: 3 TFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASSS 62
TFS+RR G+FKKA E A + +IAVLV SP PY +G P F+ V+++ + S+S
Sbjct: 20 TFSRRRNGIFKKADELAKLCNVEIAVLVISPTNIPYTYGYPCFNDVVERIQN----PSAS 75
Query: 63 GQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAVKAEL 122
++ + E + + F L+ + ++ + + D +K EDL A KA+L
Sbjct: 76 SKLRSLMKELEQIKE---FQEDLRKKQ-QRNLEKSNMKENVD-LK----LEDLVAFKAKL 126
Query: 123 EEVRVKVLQRLKHIE-EDEFVTSLLN 147
E + L+R KH+E ED S+L+
Sbjct: 127 EAYQAG-LKR-KHVEMEDLSSPSILS 150
>TAIR|locus:2115420 [details] [associations]
symbol:AT4G36590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS50066 SMART:SM00432 GO:GO:0005829 GO:GO:0005634
EMBL:CP002687 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 HSSP:Q02078 EMBL:AL161589 EMBL:Z99708 EMBL:AY086178
EMBL:AY141234 EMBL:DQ446902 IPI:IPI00520544 PIR:A85432
RefSeq:NP_195377.1 UniGene:At.31315 ProteinModelPortal:O23222
SMR:O23222 IntAct:O23222 STRING:O23222 PRIDE:O23222
EnsemblPlants:AT4G36590.1 GeneID:829811 KEGG:ath:AT4G36590
TAIR:At4g36590 InParanoid:O23222 OMA:DLDMNET PhylomeDB:O23222
ProtClustDB:CLSN2685561 Genevestigator:O23222 Uniprot:O23222
Length = 248
Score = 137 (53.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTFSKRR GLFKKA E ++G++I ++VFSP G + G PS +I +F + N
Sbjct: 24 VTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSFGHPSVQELIHRFSNPN 78
>TAIR|locus:2025386 [details] [associations]
symbol:AGL28 "AGAMOUS-like 28" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 EMBL:AC061957 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
ProtClustDB:CLSN2679619 EMBL:AY141231 EMBL:DQ446218 EMBL:AB493420
IPI:IPI00522692 PIR:H86145 RefSeq:NP_171660.1 UniGene:At.42643
ProteinModelPortal:Q9LMM8 SMR:Q9LMM8 IntAct:Q9LMM8 STRING:Q9LMM8
EnsemblPlants:AT1G01530.1 GeneID:837142 KEGG:ath:AT1G01530
TAIR:At1g01530 InParanoid:Q9LMM8 OMA:KMTNESN PhylomeDB:Q9LMM8
ArrayExpress:Q9LMM8 Genevestigator:Q9LMM8 Uniprot:Q9LMM8
Length = 247
Score = 133 (51.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFL 53
VTFSKRR GLFKK E + ++IA++VFSP+G Y G P+ + ++D L
Sbjct: 24 VTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPNVNKLLDHSL 75
>TAIR|locus:2102990 [details] [associations]
symbol:AGL57 "AGAMOUS-like 57" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11831
HOGENOM:HOG000238700 EMBL:AC016829 EMBL:DQ056586 IPI:IPI00531240
RefSeq:NP_187060.1 UniGene:At.53175 ProteinModelPortal:Q9M8W6
SMR:Q9M8W6 IntAct:Q9M8W6 PRIDE:Q9M8W6 EnsemblPlants:AT3G04100.1
GeneID:819565 KEGG:ath:AT3G04100 TAIR:At3g04100 InParanoid:Q9M8W6
OMA:VEVAFLI PhylomeDB:Q9M8W6 ProtClustDB:CLSN2913500
ArrayExpress:Q9M8W6 Genevestigator:Q9M8W6 Uniprot:Q9M8W6
Length = 207
Score = 109 (43.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 1 MVTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
M+TFSKR+ G+FKK E + ++A L+FS PY PS V D+
Sbjct: 30 MITFSKRKTGIFKKMNELVAMCDVEVAFLIFSQPKKPYTFAHPSMKKVADR 80
Score = 36 (17.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 85 LQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAVKAELEEVRVKVLQRLKHIEE 138
L+N + + R L + K+ R DL LEE L++LK ++E
Sbjct: 81 LKNPSRQEPLERDDTRPLVEAYKK-RRLHDLVKKMEALEEELAMDLEKLKLLKE 133
>TAIR|locus:2082618 [details] [associations]
symbol:AGL16 "AGAMOUS-like 16" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010440 "stomatal lineage progression" evidence=IMP]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009556
"microsporogenesis" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0042803 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
EMBL:AY141209 EMBL:BT030046 EMBL:AF312662 IPI:IPI00522001
IPI:IPI01027879 RefSeq:NP_191282.2 UniGene:At.21102 HSSP:Q02078
ProteinModelPortal:A2RVQ5 SMR:A2RVQ5 IntAct:A2RVQ5 STRING:A2RVQ5
PRIDE:A2RVQ5 EnsemblPlants:AT3G57230.1 GeneID:824890
KEGG:ath:AT3G57230 GeneFarm:3515 TAIR:At3g57230 InParanoid:A2RVQ5
OMA:ASEIQFW PhylomeDB:A2RVQ5 ProtClustDB:CLSN2680436
ArrayExpress:A2RVQ5 Genevestigator:A2RVQ5 GO:GO:0010440
Uniprot:A2RVQ5
Length = 240
Score = 129 (50.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GL KKA+E A + +++ V++FS G Y S S +VI+++ G SS
Sbjct: 19 VTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYSDAKGETSS 78
Query: 62 ----SGQVGAHHNEADVCRTPTPFHLVLQNH 88
+ ++ EA + + H + +NH
Sbjct: 79 ENDPASEIQFWQKEAAILKRQ--LHNLQENH 107
>TAIR|locus:2032543 [details] [associations]
symbol:AGL58 "AGAMOUS-like 58" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746
HOGENOM:HOG000238700 eggNOG:KOG0014 EMBL:AC010155
ProtClustDB:CLSN2679626 IPI:IPI00519993 RefSeq:NP_174167.1
UniGene:At.51804 ProteinModelPortal:Q9SGP3 SMR:Q9SGP3 PRIDE:Q9SGP3
EnsemblPlants:AT1G28450.1 GeneID:839743 KEGG:ath:AT1G28450
TAIR:At1g28450 InParanoid:Q9SGP3 PhylomeDB:Q9SGP3
Genevestigator:Q9SGP3 Uniprot:Q9SGP3
Length = 185
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VT SKR ++ E + + G ++A + +S +G PY GSPSF AV+++FL NG ASS
Sbjct: 25 VTLSKRLNAIYTMIIELSILCGVEVAFIGYSCSGKPYTFGSPSFQAVVERFL--NGEASS 82
Query: 62 S 62
S
Sbjct: 83 S 83
>TAIR|locus:2195798 [details] [associations]
symbol:AT1G17310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AC026479
ProtClustDB:CLSN2679559 EMBL:AY141240 EMBL:DQ446258 EMBL:BT025284
EMBL:AB493462 IPI:IPI00524771 PIR:E86309 RefSeq:NP_173175.1
UniGene:At.41842 ProteinModelPortal:Q9LN16 SMR:Q9LN16
EnsemblPlants:AT1G17310.1 GeneID:838303 KEGG:ath:AT1G17310
TAIR:At1g17310 InParanoid:Q9LN16 OMA:IVAMGND PhylomeDB:Q9LN16
ArrayExpress:Q9LN16 Genevestigator:Q9LN16 Uniprot:Q9LN16
Length = 217
Score = 126 (49.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFL 53
VTFSKRR+GLFKK+ E + +TG++IAV+ FS Y G DA+IDK+L
Sbjct: 65 VTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRFGH--VDALIDKYL 114
>UNIPROTKB|Q7XUN2 [details] [associations]
symbol:MADS17 "MADS-box transcription factor 17"
species:39947 "Oryza sativa Japonica Group" [GO:0010093
"specification of floral organ identity" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 GO:GO:0010228 SUPFAM:SSF55455
GO:GO:0010093 EMBL:AF109153 EMBL:AY551918 EMBL:AL606688
EMBL:AF095646 ProteinModelPortal:Q7XUN2 IntAct:Q7XUN2
KEGG:dosa:Os04t0580700-01 Gramene:Q7XUN2 Uniprot:Q7XUN2
Length = 249
Score = 125 (49.1 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSV--NGGA 59
VTFSKRR GL KKA E + + +++A+++FS G Y GS + ++K+ S N
Sbjct: 19 VTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQG 78
Query: 60 SSSGQVGAHH 69
S+S G H
Sbjct: 79 SNSALAGGEH 88
>UNIPROTKB|Q10CQ1 [details] [associations]
symbol:MADS14 "MADS-box transcription factor 14"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:DP000009 EMBL:AP008209 eggNOG:COG5068 SUPFAM:SSF55455
GO:GO:0009908 KO:K09264 EMBL:AF377947 EMBL:AC135225 EMBL:AC092556
EMBL:AF058697 EMBL:AB041020 EMBL:AY332478 EMBL:AY551916
RefSeq:NP_001051300.1 UniGene:Os.2348 ProteinModelPortal:Q10CQ1
IntAct:Q10CQ1 EnsemblPlants:LOC_Os03g54160.2 GeneID:4334140
KEGG:osa:4334140 Gramene:Q10CQ1 ProtClustDB:CLSN2694303
Uniprot:Q10CQ1
Length = 246
Score = 106 (42.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS-FDAVIDKF 52
VTFSKRR GL KKA E + + +++A+++FS G Y + + S D +++++
Sbjct: 19 VTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERY 70
Score = 47 (21.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 83 LVLQNHHNEADVCRGF--LMALEDKIKRCRS---AEDLSAVKA-ELEEVRVKVLQRLKHI 136
L+ + + C + L A + I++C+ EDL ++ EL+++ ++ LKHI
Sbjct: 80 LISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHI 139
>TAIR|locus:2121070 [details] [associations]
symbol:AGL21 "AT4G37940" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009556 "microsporogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161592 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
ProtClustDB:CLSN2683748 EMBL:AF336979 EMBL:AL035538 IPI:IPI00531853
PIR:T05621 RefSeq:NP_195507.1 UniGene:At.28801
ProteinModelPortal:Q9SZJ6 SMR:Q9SZJ6 IntAct:Q9SZJ6 STRING:Q9SZJ6
EnsemblPlants:AT4G37940.1 GeneID:829950 KEGG:ath:AT4G37940
GeneFarm:3544 TAIR:At4g37940 InParanoid:Q9SZJ6 OMA:DDESHTQ
PhylomeDB:Q9SZJ6 ArrayExpress:Q9SZJ6 Genevestigator:Q9SZJ6
GermOnline:AT4G37940 Uniprot:Q9SZJ6
Length = 228
Score = 121 (47.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF----LSVNG 57
VTFSKRR+GL KKA+E A + +++ +++FS G Y S S +VID++ +
Sbjct: 19 VTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQ 78
Query: 58 GASSSGQVGAHHNEADVCRTPTPFHLVLQNH 88
+ + +V EA V R H + +NH
Sbjct: 79 LLNPASEVKFWQREAAVLRQE--LHALQENH 107
>POMBASE|SPAC11E3.06 [details] [associations]
symbol:map1 "MADS-box transcription factor Map1"
species:4896 "Schizosaccharomyces pombe" [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=NAS] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0001197 "positive regulation of
mating-type specific transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IC;IDA] [GO:0007532 "regulation of mating-type
specific transcription, DNA-dependent" evidence=IMP] [GO:0010514
"induction of conjugation with cellular fusion" evidence=IMP]
[GO:0036003 "positive regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IMP]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0075296 "positive regulation of ascospore formation"
evidence=IMP] [GO:0090028 "positive regulation of
pheromone-dependent signal transduction involved in conjugation
with cellular fusion" evidence=IMP] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
PomBase:SPAC11E3.06 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0000978 GO:GO:0000982
eggNOG:COG5068 SUPFAM:SSF55455 OrthoDB:EOG4P2TC4 GO:GO:0010514
GO:GO:0090028 GO:GO:0036003 EMBL:D78483 EMBL:L77973 PIR:T43225
PIR:T43415 RefSeq:NP_594931.1 ProteinModelPortal:P78926
EnsemblFungi:SPAC11E3.06.1 GeneID:2541765 KEGG:spo:SPAC11E3.06
NextBio:20802856 GO:GO:0075296 GO:GO:0001197 Uniprot:P78926
Length = 398
Score = 108 (43.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 3 TFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVI 49
TF+KR+ G+FKKA E A +TGS++ VLV S G + +P + V+
Sbjct: 37 TFTKRKAGIFKKANELALLTGSEVMVLVVSETGLVHTFSTPKLENVV 83
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 16/75 (21%), Positives = 32/75 (42%)
Query: 73 DVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAVKAELEEVRVKVLQR 132
+V ++P L+ ++ N A + A + K + ++ S + EE+R+
Sbjct: 81 NVVKSPEGQKLITESLIN-ATTDQNESQASQAKQSSAQLSDSESGYPLDHEEMRISEENG 139
Query: 133 LKHIEEDEFVTSLLN 147
HIE F + + N
Sbjct: 140 PSHIENLNFFSDIDN 154
>UNIPROTKB|Q9XJ66 [details] [associations]
symbol:MADS22 "MADS-box transcription factor 22"
species:39947 "Oryza sativa Japonica Group" [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0009908
"flower development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0009908
GO:GO:0009910 GO:GO:0048510 GO:GO:0010582 GO:GO:0048438
GO:GO:0010076 GO:GO:0010077 GO:GO:0009266 GO:GO:0000900
EMBL:AB003322 EMBL:AB107957 EMBL:AP004159 RefSeq:NP_001048193.1
UniGene:Os.4171 ProteinModelPortal:Q9XJ66 IntAct:Q9XJ66
STRING:Q9XJ66 EnsemblPlants:LOC_Os02g52340.1 GeneID:4330805
KEGG:osa:4330805 Gramene:Q9XJ66 OMA:CSSSMKE ProtClustDB:CLSN2693232
Uniprot:Q9XJ66
Length = 228
Score = 118 (46.6 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR+GLFKKA+E + + + +A++VFS G S S + +IDK+
Sbjct: 19 VTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKY 69
>TAIR|locus:2824536 [details] [associations]
symbol:AGL12 "AGAMOUS-like 12" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0006826 "iron ion transport"
evidence=RCA] [GO:0010106 "cellular response to iron ion
starvation" evidence=RCA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048527 "lateral
root development" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048364 EMBL:U20193 EMBL:AC012654 EMBL:AC016163
EMBL:BT006157 EMBL:BT008332 EMBL:BT008524 IPI:IPI00543643
PIR:H96738 RefSeq:NP_565022.1 UniGene:At.19719
ProteinModelPortal:Q38841 SMR:Q38841 IntAct:Q38841 STRING:Q38841
PRIDE:Q38841 EnsemblPlants:AT1G71692.1 GeneID:843497
KEGG:ath:AT1G71692 GeneFarm:3512 TAIR:At1g71692 eggNOG:COG5068
HOGENOM:HOG000155301 InParanoid:Q38841 OMA:HLEYWIS PhylomeDB:Q38841
ProtClustDB:CLSN2689145 Genevestigator:Q38841 GermOnline:AT1G71692
GO:GO:0010228 SUPFAM:SSF55455 Uniprot:Q38841
Length = 211
Score = 116 (45.9 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSP-SFDAVIDKFLSVNGGAS 60
VTF KRR GL KKA+E + + ++I V++FSP G + + + + +IDK++ GG
Sbjct: 19 VTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGR 78
Query: 61 SS 62
S
Sbjct: 79 GS 80
>UNIPROTKB|Q9ATE9 [details] [associations]
symbol:FBP20 "MADS-box transcription factor FBP20"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AF335238
ProteinModelPortal:Q9ATE9 IntAct:Q9ATE9 Uniprot:Q9ATE9
Length = 216
Score = 116 (45.9 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA E + + +Q+ +++FSP G Y S S +I+++
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAQVGLVIFSPRGKQYEFSSSSMQEIIERY 69
>UNIPROTKB|Q40885 [details] [associations]
symbol:AG1 "Floral homeotic protein AGAMOUS" species:4102
"Petunia x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:X72912 EMBL:AB076051 PIR:JQ2212
ProteinModelPortal:Q40885 IntAct:Q40885 Uniprot:Q40885
Length = 242
Score = 117 (46.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTF KRR GL KKA E + + +++A++VFS G Y + + S A I+++ +S+
Sbjct: 35 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSN 94
Query: 62 SGQVGA-----HHNEADVCRTPTPFHLVLQNHH--NEADVCRGF--LMALEDKIKRCRSA 112
+G + + EA R +L QN + E+ L LE KI++
Sbjct: 95 TGSIAEANAQYYQQEASKLRAQIG-NLQNQNRNFLGESLAALNLRDLRNLEQKIEK--GI 151
Query: 113 EDLSAVKAELEEVRVKVLQR 132
+ A K EL ++ +Q+
Sbjct: 152 SKIRAKKNELLFAEIEYMQK 171
>TAIR|locus:2165386 [details] [associations]
symbol:AGL72 "AGAMOUS-like 72" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002688 EMBL:AB010074 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 GO:GO:0009909 EMBL:AB025623 EMBL:AY141221
IPI:IPI00532403 RefSeq:NP_199999.1 UniGene:At.29656
ProteinModelPortal:Q9FLH5 SMR:Q9FLH5 IntAct:Q9FLH5
EnsemblPlants:AT5G51860.1 GeneID:835261 KEGG:ath:AT5G51860
TAIR:At5g51860 InParanoid:Q9FLH5 OMA:YEFASSD PhylomeDB:Q9FLH5
ProtClustDB:CLSN2687435 ArrayExpress:Q9FLH5 Genevestigator:Q9FLH5
Uniprot:Q9FLH5
Length = 211
Score = 106 (42.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GLFKKA E + + +Q+A ++FS G Y S I ++
Sbjct: 19 VTFSKRRSGLFKKAHELSVLCDAQVAAMIFSQKGRLYEFASSDIRNTIKRY 69
Score = 35 (17.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 111 SAEDLSAVKAELEEVRVKVLQRLKHIEEDE 140
S ++LS + ++E+ V R + EDE
Sbjct: 121 SVKELSEIATQIEKSLHMVRLRKAKLYEDE 150
>UNIPROTKB|Q9ATE5 [details] [associations]
symbol:FBP24 "MADS-box protein FBP24" species:4102 "Petunia
x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:AF335242
ProteinModelPortal:Q9ATE5 SMR:Q9ATE5 IntAct:Q9ATE5 Uniprot:Q9ATE5
Length = 268
Score = 117 (46.2 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 39/141 (27%), Positives = 67/141 (47%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGS-P-SFDAVIDKFLSVNGGA 59
VTFSKRR GL KK E + + +QI +++FS G + + S P S +I ++L G +
Sbjct: 22 VTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGAS 81
Query: 60 S--SSGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSA 117
+V + A + R L LQ + + D+ L + K+ A L+
Sbjct: 82 LPVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGD-DLSLAQYEELNELEKQLEHA--LNK 138
Query: 118 VKAELEEVRVKVLQRLKHIEE 138
++A E+ + ++ LK E+
Sbjct: 139 IRARKLELMQQQMENLKKTEK 159
>TAIR|locus:2193922 [details] [associations]
symbol:AT1G72350 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:P11746 EMBL:AC016529
EMBL:AY141235 EMBL:DQ446421 EMBL:BT025647 IPI:IPI00525774
PIR:D96747 RefSeq:NP_177379.1 UniGene:At.64898
ProteinModelPortal:Q9C9D4 SMR:Q9C9D4 EnsemblPlants:AT1G72350.1
GeneID:843567 KEGG:ath:AT1G72350 TAIR:At1g72350 InParanoid:Q9C9D4
OMA:NEMAMAD PhylomeDB:Q9C9D4 ProtClustDB:CLSN2679559
ArrayExpress:Q9C9D4 Genevestigator:Q9C9D4 Uniprot:Q9C9D4
Length = 224
Score = 115 (45.5 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFL 53
VTFSKRR GLFKKA E + + G+QI ++ FS Y G+ +++IDK+L
Sbjct: 60 VTFSKRRSGLFKKAAELSVLCGAQIGIITFSRCDRIYSFGN--VNSLIDKYL 109
>TAIR|locus:2005522 [details] [associations]
symbol:AGL20 "AT2G45660" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0009908 "flower development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0009409 "response to cold" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:0010077
"maintenance of inflorescence meristem identity" evidence=IGI]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 GO:GO:0000060 GO:GO:0009911
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0009908
GO:GO:0010077 EMBL:AC003680 EMBL:AY007726 EMBL:AF385731
EMBL:AY093967 IPI:IPI00527426 PIR:T00879 RefSeq:NP_182090.1
UniGene:At.25546 ProteinModelPortal:O64645 SMR:O64645 IntAct:O64645
STRING:O64645 EnsemblPlants:AT2G45660.1 GeneID:819174
KEGG:ath:AT2G45660 GeneFarm:3500 TAIR:At2g45660 InParanoid:O64645
OMA:YEFASSN PhylomeDB:O64645 ProtClustDB:CLSN2683366
Genevestigator:O64645 GermOnline:AT2G45660 Uniprot:O64645
Length = 214
Score = 114 (45.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFL 53
VTFSKRR GL KKA E + + +++++++FSP G Y S + ID++L
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYL 70
>TAIR|locus:2102871 [details] [associations]
symbol:AGL79 "AGAMOUS-like 79" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002686 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:Q02078 GO:GO:0048830 GO:GO:0010093 OMA:PPWMLRT EMBL:AY141238
IPI:IPI00517180 RefSeq:NP_189645.2 UniGene:At.36813
ProteinModelPortal:Q7X9H6 SMR:Q7X9H6 IntAct:Q7X9H6
EnsemblPlants:AT3G30260.1 GeneID:822726 KEGG:ath:AT3G30260
TAIR:At3g30260 InParanoid:Q7X9H6 PhylomeDB:Q7X9H6
ProtClustDB:CLSN2918545 ArrayExpress:Q7X9H6 Genevestigator:Q7X9H6
Uniprot:Q7X9H6
Length = 249
Score = 115 (45.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGN--PYVHGSPSFDAVIDKF 52
VTFSKRR GL KKAQE + + +++A++VFSP G Y GS S + ++D++
Sbjct: 19 VTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAGS-SMERILDRY 70
>UNIPROTKB|Q9ZS29 [details] [associations]
symbol:GAGA2 "MADS-box protein, GAGA2" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009723 ProteinModelPortal:Q9ZS29 IntAct:Q9ZS29
Uniprot:Q9ZS29
Length = 246
Score = 114 (45.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/135 (28%), Positives = 62/135 (45%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTF KRR GL KKA E + + +++A++VFS G Y + + S ID++ S
Sbjct: 34 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTIDRYKKACLDPPS 93
Query: 62 SGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAVKAE 121
SG V A N + + N N+ R F + + A+DL ++++
Sbjct: 94 SGSV-AEANAQFYQQEAAKLRQQIANLQNQN---RQFYRNIMGESLGNMPAKDLKNLESK 149
Query: 122 LEEVRVKVLQRLKHI 136
LE+ K+ + I
Sbjct: 150 LEKGIGKIRSKKNEI 164
>TAIR|locus:2127213 [details] [associations]
symbol:AGL19 "AGAMOUS-like 19" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010048 "vernalization response" evidence=RCA;IMP] [GO:0048510
"regulation of timing of transition from vegetative to reproductive
phase" evidence=IMP] [GO:0043481 "anthocyanin accumulation in
tissues in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
ProtClustDB:CLSN2685538 GO:GO:0009908 EMBL:AF312664 EMBL:AL031018
EMBL:AL161558 EMBL:AY142523 IPI:IPI00538138 PIR:T05126
RefSeq:NP_194026.1 UniGene:At.2376 ProteinModelPortal:O82743
SMR:O82743 IntAct:O82743 STRING:O82743 EnsemblPlants:AT4G22950.1
GeneID:828394 KEGG:ath:AT4G22950 GeneFarm:3503 TAIR:At4g22950
InParanoid:O82743 OMA:SSEVNID PhylomeDB:O82743
Genevestigator:O82743 GermOnline:AT4G22950 GO:GO:0048510
GO:GO:0010048 Uniprot:O82743
Length = 219
Score = 112 (44.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/142 (27%), Positives = 68/142 (47%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GL KKA E + + +++A+++FSP Y S S A I+++
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERY------QRR 72
Query: 62 SGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAVKAE 121
++G +H D + L + ++ + L+ + I C S E+L ++ +
Sbjct: 73 IKEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLG--EGIDAC-SIEELQQLENQ 129
Query: 122 LEE----VRVKVLQRLKH-IEE 138
L+ +R K Q L+ IE+
Sbjct: 130 LDRSLSRIRAKKYQLLREEIEK 151
>UNIPROTKB|Q43616 [details] [associations]
symbol:fbp7 "Floral binding protein number 7" species:4102
"Petunia x hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 UniProt:Q43616 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:X81651
ProteinModelPortal:Q43616 IntAct:Q43616
Length = 225
Score = 111 (44.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 41/155 (26%), Positives = 77/155 (49%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN---GG 58
VTF KRR GL KKA E + + ++IA++VFS G Y + + + A+ID++
Sbjct: 19 VTFCKRRNGLLKKAYELSVLCEAEIALIVFSTRGRVYEYSNNNIRAIIDRYKKATVETSN 78
Query: 59 ASSSGQVGAHHNEADVCRTPTPFHLVLQ-NHHNEADVCRGF----LMALEDKIKR----C 109
A ++ ++ A + + + L+ N H + L LE++++R
Sbjct: 79 AFTTQELNAQFYQQESKKLRQQIQLIQNSNRHLVGEGLSSLNVRELKQLENRLERGIARI 138
Query: 110 RSAEDLSAVKAELEEVRVKVLQRLKHIEEDEFVTS 144
RS + + AE E+++ + +Q L+ +E+ F+ S
Sbjct: 139 RSKKH-EMILAESEDLQKREIQ-LE--QENAFLRS 169
>TAIR|locus:2043600 [details] [associations]
symbol:AGL6 "AT2G45650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0048437 "floral organ development" evidence=IMP] [GO:0009911
"positive regulation of flower development" evidence=IMP]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009911 eggNOG:COG5068
GO:GO:0010228 SUPFAM:SSF55455 EMBL:M55554 EMBL:AC003680
IPI:IPI00531522 PIR:F39534 RefSeq:NP_182089.1 UniGene:At.512
ProteinModelPortal:P29386 SMR:P29386 IntAct:P29386 STRING:P29386
EnsemblPlants:AT2G45650.1 GeneID:819173 KEGG:ath:AT2G45650
GeneFarm:3546 TAIR:At2g45650 InParanoid:P29386 KO:K09264
OMA:KERQLGD PhylomeDB:P29386 ProtClustDB:CLSN2913049
Genevestigator:P29386 GO:GO:0048437 Uniprot:P29386
Length = 252
Score = 112 (44.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA E + + +++A+++FS G Y GS ++ I+++
Sbjct: 19 VTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERY 69
>TAIR|locus:2166766 [details] [associations]
symbol:TT16 "TRANSPARENT TESTA16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;IMP] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IMP] [GO:2000029 "regulation of proanthocyanidin
biosynthetic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048316 "seed development" evidence=IGI;IMP]
[GO:0048481 "ovule development" evidence=IGI;RCA;IMP] [GO:0080155
"regulation of double fertilization forming a zygote and endosperm"
evidence=IGI] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 UniPathway:UPA00154 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008360 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048316 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0048481 GO:GO:0080155 GO:GO:0009813
EMBL:AB007648 EMBL:AJ318098 EMBL:AY141212 EMBL:BT030048
IPI:IPI00522403 IPI:IPI00535111 RefSeq:NP_001119264.1
RefSeq:NP_197717.3 RefSeq:NP_974823.1 UniGene:At.31019
ProteinModelPortal:Q8RYD9 SMR:Q8RYD9 IntAct:Q8RYD9 STRING:Q8RYD9
EnsemblPlants:AT5G23260.2 GeneID:832390 KEGG:ath:AT5G23260
GeneFarm:3507 TAIR:At5g23260 InParanoid:Q8RYD9 OMA:IENQTAR
PhylomeDB:Q8RYD9 ProtClustDB:CLSN2681063 ArrayExpress:Q8RYD9
Genevestigator:Q8RYD9 GermOnline:AT5G23260 GO:GO:2000029
Uniprot:Q8RYD9
Length = 252
Score = 111 (44.1 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 44/147 (29%), Positives = 69/147 (46%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAG--NPYVHGSPSFDAVIDKFLSVNG-- 57
VTFSKRR GL KK +E + + + I ++VFS G + + +ID++L NG
Sbjct: 19 VTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTNGLR 78
Query: 58 -GASSSGQVGAHHNEADVCRTPT-PFHLVLQNHHNE--ADVCRGFLMALEDKIKRCRSAE 113
Q HH E ++ R T L L+ H A + L LE +++ S
Sbjct: 79 LPDHHDDQEQLHH-EMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEH--SVL 135
Query: 114 DLSAVKAELEEVRVKVLQRLKH-IEED 139
+ K EL + +++ L R + +EED
Sbjct: 136 KVRERKNELMQQQLENLSRKRRMLEED 162
>SGD|S000004646 [details] [associations]
symbol:MCM1 "Transcription factor involved in both repression
and activation" species:4932 "Saccharomyces cerevisiae" [GO:0003688
"DNA replication origin binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006525 "arginine metabolic process" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IMP;IPI] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IMP;IDA]
[GO:0044377 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding, bending" evidence=IDA;IMP]
[GO:0090282 "positive regulation of transcription involved in
G2/M-phase of mitotic cell cycle" evidence=IMP] [GO:0006270 "DNA
replication initiation" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0001133 "sequence-specific
transcription regulatory region DNA binding RNA polymerase II
transcription factor recruiting transcription factor activity"
evidence=IDA;IPI] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IDA;IPI] [GO:0001198
"negative regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0001197 "positive regulation of mating-type
specific transcription from RNA polymerase II promoter"
evidence=IDA;IMP] [GO:0031494 "regulation of mating type switching"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:1900465 "negative regulation of arginine
catabolic process by negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:1900466 "positive
regulation of arginine biosynthetic process by positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 SGD:S000004646 GO:GO:0001078
GO:GO:0003688 GO:GO:0001077 EMBL:BK006946 GO:GO:0000790
GO:GO:0006270 eggNOG:COG5068 SUPFAM:SSF55455 EMBL:Z48502
GO:GO:0006525 GeneTree:ENSGT00400000022158 OrthoDB:EOG4P2TC4
GO:GO:0001102 GO:GO:0001133 GO:GO:0090282 GO:GO:0001197 KO:K12412
EMBL:X52453 EMBL:X14187 EMBL:M17511 EMBL:AY557985 PIR:A34599
RefSeq:NP_013757.1 PDB:1MNM PDBsum:1MNM ProteinModelPortal:P11746
SMR:P11746 DIP:DIP-72N IntAct:P11746 MINT:MINT-478633 STRING:P11746
PaxDb:P11746 EnsemblFungi:YMR043W GeneID:855060 KEGG:sce:YMR043W
CYGD:YMR043w OMA:CLNAPDD EvolutionaryTrace:P11746 NextBio:978315
Genevestigator:P11746 GermOnline:YMR043W GO:GO:0044377
GO:GO:1900465 GO:GO:0001198 GO:GO:1900466 GO:GO:0031494
Uniprot:P11746
Length = 286
Score = 112 (44.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVI 49
VTFSKR+ G+ KKA E + +TG+Q+ +LV S G Y +P F+ ++
Sbjct: 34 VTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIV 81
>TAIR|locus:2121924 [details] [associations]
symbol:AGL24 "AT4G24540" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010220 "positive regulation of
vernalization response" evidence=IEP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0000060 "protein import into nucleus,
translocation" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0010077 "maintenance of inflorescence meristem identity"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048438 "floral whorl development" evidence=IGI] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:0043565
"sequence-specific DNA binding" evidence=IPI] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0010076 "maintenance of floral meristem identity" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048481
"ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 GO:GO:0000060 EMBL:AL035356 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 HSSP:Q02078 GO:GO:0048510
EMBL:AF005158 EMBL:AF005159 EMBL:AL161561 EMBL:BT025171
EMBL:AB493697 IPI:IPI00544128 PIR:T05580 PIR:T51827
RefSeq:NP_194185.1 UniGene:At.4507 ProteinModelPortal:O82794
SMR:O82794 IntAct:O82794 STRING:O82794 EnsemblPlants:AT4G24540.1
GeneID:828556 KEGG:ath:AT4G24540 GeneFarm:3509 TAIR:At4g24540
InParanoid:O82794 OMA:LHASNIN PhylomeDB:O82794
ProtClustDB:CLSN2915842 GO:GO:0010582 GO:GO:0048438 GO:GO:0010076
GO:GO:0010077 GO:GO:0010220 Uniprot:O82794
Length = 220
Score = 109 (43.4 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 42/139 (30%), Positives = 65/139 (46%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR+G+FKKA E + + + +A+++FS G + S ++
Sbjct: 19 VTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMRDIL------------ 66
Query: 62 SGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRS--AEDLSAVK 119
G+ H + + P HL L+N ++ R +EDK K+ R EDL +
Sbjct: 67 -GRYSLHASNINKLMDPPSTHLRLEN----CNLSR-LSKEVEDKTKQLRKLRGEDLDGLN 120
Query: 120 AELEEVRVKVLQRLKHIEE 138
LEE LQRL+ + E
Sbjct: 121 --LEE-----LQRLEKLLE 132
>TAIR|locus:2057741 [details] [associations]
symbol:AGL33 "AGAMOUS-like 33" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 EMBL:AC004484 EMBL:AY141233 IPI:IPI00538668 PIR:A84659
RefSeq:NP_180200.1 UniGene:At.38911 ProteinModelPortal:O64840
SMR:O64840 PRIDE:O64840 EnsemblPlants:AT2G26320.1 GeneID:817172
KEGG:ath:AT2G26320 TAIR:At2g26320 eggNOG:NOG276411
InParanoid:O64840 OMA:FHTILER PhylomeDB:O64840
ProtClustDB:CLSN2913018 ArrayExpress:O64840 Genevestigator:O64840
Uniprot:O64840
Length = 109
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 4 FSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHG--SPSFDAVIDKF 52
FSKR++GLFKKA+E A + S I ++V SP P V S SF ++++F
Sbjct: 37 FSKRKKGLFKKAEEVALLCDSDIMLIVVSPTEKPTVFNTRSRSFHTILERF 87
>UNIPROTKB|Q9ZS30 [details] [associations]
symbol:gaga1 "MADS-box protein, GAGA1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:AJ009722
ProteinModelPortal:Q9ZS30 IntAct:Q9ZS30 Uniprot:Q9ZS30
Length = 264
Score = 110 (43.8 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTF KRR GL KKA E + + +++A++VFS G Y + + S IDK+ +
Sbjct: 51 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTIDKYKKACLDPPT 110
Query: 62 SGQV 65
SG V
Sbjct: 111 SGTV 114
>TAIR|locus:2177125 [details] [associations]
symbol:AGL15 "AGAMOUS-like 15" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA;TAS]
[GO:0060862 "negative regulation of floral organ abscission"
evidence=IMP] [GO:0010047 "fruit dehiscence" evidence=IMP]
[GO:0060867 "fruit abscission" evidence=IMP] [GO:2000692 "negative
regulation of seed maturation" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;IDA]
[GO:0071365 "cellular response to auxin stimulus" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048577
"negative regulation of short-day photoperiodism, flowering"
evidence=IMP] [GO:0010262 "somatic embryogenesis" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IDA;TAS] [GO:0045487 "gibberellin catabolic
process" evidence=TAS] [GO:0006944 "cellular membrane fusion"
evidence=RCA] [GO:0009556 "microsporogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0052543 "callose
deposition in cell wall" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0045893 GO:GO:0042803 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0010047 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:U22528 EMBL:AB011484
EMBL:AB005230 EMBL:U20185 IPI:IPI00536362 PIR:S71200
RefSeq:NP_196883.1 UniGene:At.28675 ProteinModelPortal:Q38847
SMR:Q38847 IntAct:Q38847 STRING:Q38847 EnsemblPlants:AT5G13790.1
GeneID:831224 KEGG:ath:AT5G13790 GeneFarm:3513 TAIR:At5g13790
InParanoid:Q38847 OMA:LYHALIT PhylomeDB:Q38847
ProtClustDB:CLSN2916614 Genevestigator:Q38847 GermOnline:AT5G13790
GO:GO:0071365 GO:GO:0009908 GO:GO:0060867 GO:GO:0045487
GO:GO:0060862 GO:GO:0009910 GO:GO:2000692 GO:GO:0048577
GO:GO:0010262 Uniprot:Q38847
Length = 268
Score = 110 (43.8 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GL KKA+E + + +++AV+VFS +G + + S + ++ N +SS
Sbjct: 19 VTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRY--GNHQSSS 76
Query: 62 SGQVGAHHNEADVCR 76
+ + E D+ +
Sbjct: 77 ASKAEEDCAEVDILK 91
>TAIR|locus:2082613 [details] [associations]
symbol:AGL18 "AGAMOUS-like 18" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0048577 "negative regulation of
short-day photoperiodism, flowering" evidence=IMP] [GO:0009555
"pollen development" evidence=IMP] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0043481 "anthocyanin accumulation in
tissues in response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL137080 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910
GO:GO:0048577 HSSP:Q02078 EMBL:AF312663 EMBL:AK220679 EMBL:AK222220
EMBL:BT025774 EMBL:AY087639 IPI:IPI00519883 IPI:IPI00530471
IPI:IPI01027882 PIR:T45817 RefSeq:NP_191298.1 RefSeq:NP_974450.1
UniGene:At.24026 ProteinModelPortal:Q9M2K8 SMR:Q9M2K8 PRIDE:Q9M2K8
EnsemblPlants:AT3G57390.1 GeneID:824906 KEGG:ath:AT3G57390
GeneFarm:3514 TAIR:At3g57390 InParanoid:Q9M2K8 OMA:TASTEHK
PhylomeDB:Q9M2K8 ProtClustDB:CLSN2684553 Genevestigator:Q9M2K8
Uniprot:Q9M2K8
Length = 256
Score = 109 (43.4 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GL KKA+E + + +++A+++FS G Y S + ++ ++ AS+
Sbjct: 19 VTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSVCMEQILSRYGYTT--AST 76
Query: 62 SGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAVKAE 121
+ H + +C + VL+N D +G L L+ I+R + E +
Sbjct: 77 EHKQQREH-QLLICASHGN-EAVLRND----DSMKGELERLQLAIERLKGKELEGMSFPD 130
Query: 122 LEEVRVKVLQRLKHIEEDEFVTSLLN 147
L + ++ + L H +D+ LLN
Sbjct: 131 LISLENQLNESL-HSVKDQKTQILLN 155
>DICTYBASE|DDB_G0282835 [details] [associations]
symbol:srfB "putative MADS-box transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0019933
"cAMP-mediated signaling" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 dictyBase:DDB_G0282835 GO:GO:0005634
EMBL:AAFI02000047 GenomeReviews:CM000152_GR GO:GO:0019933
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11831 ProtClustDB:CLSZ2430546
RefSeq:XP_639351.1 ProteinModelPortal:Q54RY6 SMR:Q54RY6
PRIDE:Q54RY6 EnsemblProtists:DDB0220492 GeneID:8623792
KEGG:ddi:DDB_G0282835 OMA:WSTASSC Uniprot:Q54RY6
Length = 467
Score = 112 (44.5 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
+TFSKR+ G+ KKA E + +TG+Q+ ++V S G+ Y +P +I K
Sbjct: 54 ITFSKRKSGIMKKAYELSTLTGTQVLLIVASETGHVYTFATPKLQPLITK 103
>UNIPROTKB|Q2QW53 [details] [associations]
symbol:MADS13 "MADS-box transcription factor 13"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048283 "indeterminate inflorescence morphogenesis"
evidence=IMP] [GO:0048481 "ovule development" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048443 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0048366 GO:GO:0048481 EMBL:DP000011
GO:GO:0048497 EMBL:AF151693 EMBL:AY332475 EMBL:AY551912
RefSeq:NP_001066385.1 UniGene:Os.2345 ProteinModelPortal:Q2QW53
IntAct:Q2QW53 EnsemblPlants:LOC_Os12g10540.1
EnsemblPlants:LOC_Os12g10540.2 EnsemblPlants:LOC_Os12g10540.3
EnsemblPlants:LOC_Os12g10540.4 GeneID:4351753 KEGG:osa:4351753
Gramene:Q2QW53 OMA:NENIYLR ProtClustDB:CLSN2698798 GO:GO:0048283
Uniprot:Q2QW53
Length = 270
Score = 108 (43.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS-FDAVIDKFLSVNGGAS 60
VTF KRR GL KKA E + + +++A++VFS G Y + + + A ID++ + S
Sbjct: 19 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGS 78
Query: 61 SSG 63
+SG
Sbjct: 79 TSG 81
>TAIR|locus:2041233 [details] [associations]
symbol:SVP "AT2G22540" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;RCA] [GO:0009910 "negative regulation
of flower development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048438 "floral whorl development" evidence=IGI]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=IDA] [GO:0009266 "response to temperature stimulus"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010076 "maintenance of floral
meristem identity" evidence=IGI] [GO:0010582 "floral meristem
determinacy" evidence=IGI] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009556
"microsporogenesis" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0045892
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
GO:GO:0009910 GO:GO:0010582 GO:GO:0048438 GO:GO:0010076
EMBL:AC006592 GO:GO:0009266 GO:GO:0000900 OMA:CSSSMKE EMBL:AF211171
EMBL:EU078686 IPI:IPI00536448 IPI:IPI00549063 IPI:IPI00938617
RefSeq:NP_001154528.1 RefSeq:NP_179840.2 UniGene:At.22081
ProteinModelPortal:Q9FVC1 SMR:Q9FVC1 DIP:DIP-33797N IntAct:Q9FVC1
STRING:Q9FVC1 PaxDb:Q9FVC1 PRIDE:Q9FVC1 EnsemblPlants:AT2G22540.1
GeneID:816787 KEGG:ath:AT2G22540 GeneFarm:3510 TAIR:At2g22540
InParanoid:Q9FVC1 PhylomeDB:Q9FVC1 ProtClustDB:CLSN2690861
Genevestigator:Q9FVC1 GermOnline:AT2G22540 Uniprot:Q9FVC1
Length = 240
Score = 107 (42.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
VTFSKRR+GLFKKA+E + + + +A+++FS G + S S V+++
Sbjct: 19 VTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLER 68
>UNIPROTKB|Q0D4T4 [details] [associations]
symbol:MADS18 "MADS-box transcription factor 18"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0010582 GO:GO:0010076 GO:GO:0010077
GO:GO:0010154 GO:GO:0009933 EMBL:AP008213 EMBL:AF091458
EMBL:AJ011675 EMBL:AP005175 RefSeq:NP_001060225.1 UniGene:Os.4573
ProteinModelPortal:Q0D4T4 IntAct:Q0D4T4
EnsemblPlants:LOC_Os07g41370.1 GeneID:4343851
KEGG:dosa:Os07t0605200-01 KEGG:osa:4343851 Gramene:Q0D4T4
OMA:PPWMLRT ProtClustDB:CLSN2696916 Uniprot:Q0D4T4
Length = 249
Score = 102 (41.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGS-PSFDAVIDKF 52
VTFSKRR GL KKA E + + + +A++VFS G Y S S + +++++
Sbjct: 19 VTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERY 70
Score = 36 (17.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 121 ELEEVRVKVLQRLKH 135
+L+ + +K LQ+L+H
Sbjct: 116 QLDTLTIKELQQLEH 130
>TAIR|locus:2199444 [details] [associations]
symbol:AGL85 "AGAMOUS-like 85" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR002100 Pfam:PF00319 PROSITE:PS50066 SMART:SM00432
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC005388 SUPFAM:SSF55455
HOGENOM:HOG000238700 eggNOG:KOG0014 ProtClustDB:CLSN2679626
IPI:IPI00521245 PIR:F96589 RefSeq:NP_175874.1 UniGene:At.52205
ProteinModelPortal:Q9ZVL8 SMR:Q9ZVL8 EnsemblPlants:AT1G54760.1
GeneID:841917 KEGG:ath:AT1G54760 TAIR:At1g54760 PhylomeDB:Q9ZVL8
Genevestigator:Q9ZVL8 Uniprot:Q9ZVL8
Length = 161
Score = 104 (41.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 15 AQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASSSGQVGAHHNEADV 74
+ E + + G+++A L +S +G PY GSPSF AV ++FL+ +S V H +A +
Sbjct: 18 SNELSILCGAEVAFLGYSCSGKPYTFGSPSFQAVAERFLNREASSSLQRSVMNAHQQAKI 77
>UNIPROTKB|D6RB91 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 InterPro:IPR022102
Pfam:PF12347 EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996
ChiTaRS:MEF2C IPI:IPI00967652 ProteinModelPortal:D6RB91 SMR:D6RB91
Ensembl:ENST00000507984 HOGENOM:HOG000197845 ArrayExpress:D6RB91
Bgee:D6RB91 Uniprot:D6RB91
Length = 120
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNG---G 58
VTF+KR+ GL KKA E + + +IA+++F+ + + S D V+ K+ N
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNEPHES 78
Query: 59 ASSSGQVGA-HHNEADVCRTPTP 80
++S V A + E C +P P
Sbjct: 79 RTNSDIVEALNKKENKGCESPDP 101
>TAIR|locus:2149264 [details] [associations]
symbol:PI "PISTILLATA" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048481 "ovule development" evidence=RCA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068
SUPFAM:SSF55455 GO:GO:0009908 KO:K09264 EMBL:AF296825 EMBL:AB035137
EMBL:D30807 EMBL:AF115815 EMBL:AF115816 EMBL:AF115817 EMBL:AF115818
EMBL:AF115819 EMBL:AF115820 EMBL:AF115821 EMBL:AF115822
EMBL:AF115823 EMBL:AF115824 EMBL:AF115825 EMBL:AF115826
EMBL:AF115827 EMBL:AF115828 EMBL:AF115829 EMBL:AF115830
IPI:IPI00548531 PIR:A53839 RefSeq:NP_197524.1 UniGene:At.21403
ProteinModelPortal:P48007 SMR:P48007 IntAct:P48007 STRING:P48007
EnsemblPlants:AT5G20240.1 GeneID:832146 KEGG:ath:AT5G20240
GeneFarm:3488 TAIR:At5g20240 InParanoid:P48007 OMA:KMMEDEN
PhylomeDB:P48007 ProtClustDB:CLSN2687197 Genevestigator:P48007
GermOnline:AT5G20240 Uniprot:P48007
Length = 208
Score = 106 (42.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 1 MVTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFD--AVIDKFLSVNG 57
+VTFSKRR GL KKA+E + +++A+++F+ G + PS D A++D++ ++G
Sbjct: 18 VVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSG 76
>WB|WBGene00006844 [details] [associations]
symbol:unc-120 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0030163 "protein catabolic process"
evidence=IMP] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006355 GO:GO:0003677 GO:GO:0040011
GO:GO:0000003 GO:GO:0006351 GO:GO:0030163 eggNOG:COG5068
SUPFAM:SSF55455 HSSP:P11831 GeneTree:ENSGT00400000022158
EMBL:Z75710 PIR:T20313 RefSeq:NP_492296.1 ProteinModelPortal:Q18955
SMR:Q18955 DIP:DIP-26080N MINT:MINT-1058826 STRING:Q18955
PaxDb:Q18955 EnsemblMetazoa:D1081.2 GeneID:172636
KEGG:cel:CELE_D1081.2 UCSC:D1081.2 CTD:172636 WormBase:D1081.2
HOGENOM:HOG000019738 InParanoid:Q18955 OMA:NGGNGMR NextBio:876363
Uniprot:Q18955
Length = 327
Score = 107 (42.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 3 TFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVI 49
TFSKR+ G+ KKA E + +TG+Q+ +LV S G+ Y + +P +I
Sbjct: 64 TFSKRKTGIMKKAFELSTLTGTQVMLLVASETGHVYTYATPKLQPMI 110
>TAIR|locus:2177749 [details] [associations]
symbol:AGL31 "AGAMOUS-like 31" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS;TAS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0010048 "vernalization response"
evidence=IMP] [GO:0010221 "negative regulation of vernalization
response" evidence=IMP] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB019236 eggNOG:COG5068
HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0009908 GO:GO:0009910
GO:GO:0010048 ProtClustDB:CLSN2686365 EMBL:AF312667 EMBL:AY141211
EMBL:AY231441 EMBL:AB026633 EMBL:EU980623 EMBL:EU980627
IPI:IPI00535221 IPI:IPI00546742 RefSeq:NP_001078798.1
RefSeq:NP_001119498.1 UniGene:At.49225 ProteinModelPortal:Q9FPN7
SMR:Q9FPN7 STRING:Q9FPN7 EnsemblPlants:AT5G65050.3 GeneID:836629
KEGG:ath:AT5G65050 GeneFarm:3558 TAIR:At5g65050 InParanoid:Q9FPN7
OMA:SVLCESS PhylomeDB:Q9FPN7 Genevestigator:Q9FPN7 GO:GO:0010221
Uniprot:Q9FPN7
Length = 196
Score = 105 (42.0 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 46/152 (30%), Positives = 80/152 (52%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGS-PSFDAVIDKFLSVNGGAS 60
VTFSKRR GL +KA++ + + S IAVLV S +G Y S + +ID++ ++
Sbjct: 19 VTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRY-EIH---- 73
Query: 61 SSGQVGAHHNEADVCRTPTPFHLVL---QNHHNEADVCRGF---LMALEDKIKRCRSAED 114
+ ++ A + A+ R P +L Q+ E++V L++LE++++ S
Sbjct: 74 HADELEAL-DLAEKTRNYLPLKELLEIVQSKLEESNVDNASVDTLISLEEQLETALSVT- 131
Query: 115 LSAVKAELEEVRVKVLQRLKHI--EEDEFVTS 144
A K EL VK LQ+ +++ EE++ + S
Sbjct: 132 -RARKTELMMGEVKSLQKTENLLREENQTLAS 162
>UNIPROTKB|Q6EU39 [details] [associations]
symbol:MADS6 "MADS-box transcription factor 6"
species:39947 "Oryza sativa Japonica Group" [GO:0005515 "protein
binding" evidence=IPI] [GO:0010022 "meristem determinacy"
evidence=IMP] [GO:0010093 "specification of floral organ identity"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
GO:GO:0045893 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301 GO:GO:0010228
SUPFAM:SSF55455 KO:K09264 GO:GO:0010093 EMBL:AP008208 EMBL:CM000139
GO:GO:0010022 EMBL:U78782 EMBL:FJ666318 EMBL:AP004178 EMBL:AK069103
PIR:T04167 RefSeq:NP_001047749.1 UniGene:Os.7271
ProteinModelPortal:Q6EU39 IntAct:Q6EU39
EnsemblPlants:LOC_Os02g45770.1 GeneID:4330328 KEGG:osa:4330328
Gramene:Q6EU39 OMA:SAGITKT ProtClustDB:CLSN2693070 Uniprot:Q6EU39
Length = 250
Score = 106 (42.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA E + + +++A+++FS G Y GS ++++
Sbjct: 19 VTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERY 69
>UNIPROTKB|Q9ATE3 [details] [associations]
symbol:FBP28 "MADS-box transcription factor FBP28"
species:4102 "Petunia x hybrida" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AF335244 ProteinModelPortal:Q9ATE3 IntAct:Q9ATE3
Uniprot:Q9ATE3
Length = 215
Score = 105 (42.0 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA E + + +++++++FS G Y S S +I+++
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVSLIIFSTRGKLYEFSSSSMQEIIERY 69
>TAIR|locus:2066050 [details] [associations]
symbol:AGL17 "AGAMOUS-like 17" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048578 "positive regulation of long-day
photoperiodism, flowering" evidence=IMP] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0052543 "callose deposition in cell wall"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:AC006340
EMBL:U20186 IPI:IPI00531185 PIR:H84614 RefSeq:NP_179848.1
UniGene:At.39413 ProteinModelPortal:Q38840 SMR:Q38840 IntAct:Q38840
STRING:Q38840 PRIDE:Q38840 EnsemblPlants:AT2G22630.1 GeneID:816794
KEGG:ath:AT2G22630 GeneFarm:3517 TAIR:At2g22630 InParanoid:Q38840
OMA:GHHELVD PhylomeDB:Q38840 ProtClustDB:CLSN2683748
ArrayExpress:Q38840 Genevestigator:Q38840 GermOnline:AT2G22630
GO:GO:0048578 Uniprot:Q38840
Length = 227
Score = 105 (42.0 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF----LSVNG 57
VTFSKRR+GL KKA+E A + +++ +++FS Y S S + I++F +
Sbjct: 19 VTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQE 78
Query: 58 GASSSGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSA 117
+ + +V EA+ R H + +N+ V L E + + L
Sbjct: 79 LMNPASEVKFWQREAETLRQE--LHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRG 136
Query: 118 VKAELEEV---RVKVLQRLKHIEEDE 140
++ + E++ +K L R +++ E
Sbjct: 137 IRMKREQILTNEIKELTRKRNLVHHE 162
>TAIR|locus:2042182 [details] [associations]
symbol:AGL44 "AGAMOUS-like 44" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0007584 "response to nutrient" evidence=IMP]
[GO:0048527 "lateral root development" evidence=RCA;IMP]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0071249 "cellular response to nitrate" evidence=IEP]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0007155
"cell adhesion" evidence=RCA] [GO:0009556 "microsporogenesis"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] [GO:0010638 "positive regulation
of organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0052543 "callose deposition in cell wall" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0010167
"response to nitrate" evidence=IMP] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0007584 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
GO:GO:0071249 eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455
HSSP:Q02078 KO:K09264 EMBL:Z97057 EMBL:AC007210 EMBL:BT005861
EMBL:AK228244 IPI:IPI00529627 PIR:A84515 PIR:T52100
RefSeq:NP_179033.1 UniGene:At.126 ProteinModelPortal:Q9SI38
SMR:Q9SI38 IntAct:Q9SI38 STRING:Q9SI38 EnsemblPlants:AT2G14210.1
GeneID:815907 KEGG:ath:AT2G14210 GeneFarm:3545 TAIR:At2g14210
InParanoid:Q9SI38 OMA:YLQECHR PhylomeDB:Q9SI38
Genevestigator:Q9SI38 Uniprot:Q9SI38
Length = 234
Score = 105 (42.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGS-PSFDAVIDKF 52
VTFSKRR GL KKA+E + + +++ V++FS G Y + S S +I+++
Sbjct: 19 VTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASNSSMKTIIERY 70
>UNIPROTKB|D2T2G0 [details] [associations]
symbol:gsqua2 "GSQUA2 protein" species:18101 "Gerbera
hybrid cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:FN298387 IntAct:D2T2G0
Uniprot:D2T2G0
Length = 238
Score = 105 (42.0 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGS-PSFDAVIDKF 52
VTFSKRR GL KKA E + + + +A++VFS G + + + S DA+++++
Sbjct: 19 VTFSKRRTGLLKKAHEISVLCDADVALIVFSTKGKLFEYSTHSSMDAILERY 70
>SGD|S000004645 [details] [associations]
symbol:ARG80 "Transcription factor involved in regulating
arginine-responsive genes" species:4932 "Saccharomyces cerevisiae"
[GO:0000987 "core promoter proximal region sequence-specific DNA
binding" evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006525 "arginine
metabolic process" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IC;ISA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:1900081 "regulation of arginine
catabolic process" evidence=IMP] [GO:1900079 "regulation of
arginine biosynthetic process" evidence=IMP] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 SGD:S000004645 GO:GO:0005634 GO:GO:0045944
EMBL:BK006946 GO:GO:0000987 GO:GO:0000982 eggNOG:COG5068
SUPFAM:SSF55455 EMBL:Z48502 GO:GO:0006525 EMBL:X05327 EMBL:AY692845
PIR:S05822 RefSeq:NP_013756.1 ProteinModelPortal:P07249 SMR:P07249
DIP:DIP-2404N IntAct:P07249 MINT:MINT-543861 STRING:P07249
EnsemblFungi:YMR042W GeneID:855059 KEGG:sce:YMR042W CYGD:YMR042w
GeneTree:ENSGT00400000022158 KO:K09265 OrthoDB:EOG4P2TC4
NextBio:978312 Genevestigator:P07249 GermOnline:YMR042W
GO:GO:1900079 GO:GO:1900081 Uniprot:P07249
Length = 177
Score = 103 (41.3 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVI 49
VTFSKRR G+ KKA E + +TG+ I +L+ + +G Y +P + V+
Sbjct: 96 VTFSKRRHGIMKKAYELSVLTGANILLLILANSGLVYTFTTPKLEPVV 143
>UNIPROTKB|H0YKY6 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000559903 Bgee:H0YKY6 Uniprot:H0YKY6
Length = 77
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTF+KR+ GL KKA E + + +IA+++F+ + + + S D V+ K+ N
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYN 73
>UNIPROTKB|H0YM62 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048311 "mitochondrion distribution"
evidence=IEA] [GO:0055005 "ventricular cardiac myofibril
development" evidence=IEA] [GO:0061337 "cardiac conduction"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455
EMBL:AC022692 EMBL:AC015660 EMBL:AC103967 HGNC:HGNC:6993
Ensembl:ENST00000560493 Bgee:H0YM62 Uniprot:H0YM62
Length = 85
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTF+KR+ GL KKA E + + +IA+++F+ + + + S D V+ K+ N
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYN 73
>UNIPROTKB|I3L7L3 [details] [associations]
symbol:LOC100738718 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
SMART:SM00432 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 SUPFAM:SSF55455 GeneTree:ENSGT00390000011828
EMBL:CU618336 Ensembl:ENSSSCT00000024093 OMA:SMGRKKI Uniprot:I3L7L3
Length = 94
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTF+KR+ GL KKA E + + +IA+++F+ + + + S D V+ K+ N
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYN 73
>UNIPROTKB|D6RG14 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000165 "MAPK cascade" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0000987 "core promoter proximal
region sequence-specific DNA binding" evidence=IEA] [GO:0001046
"core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001782 "B cell
homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0007521 "muscle cell
fate determination" evidence=IEA] [GO:0007611 "learning or memory"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0010694 "positive regulation of alkaline
phosphatase activity" evidence=IEA] [GO:0014033 "neural crest cell
differentiation" evidence=IEA] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 GO:GO:0003211 GO:GO:0035984 GO:GO:2001013
GO:GO:0072102 GO:GO:0072160 GO:GO:0014033 GO:GO:0003138
GO:GO:0060297 GO:GO:0003185 GO:GO:0055012 EMBL:AC008525
EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C IPI:IPI00967981
ProteinModelPortal:D6RG14 SMR:D6RG14 Ensembl:ENST00000503075
ArrayExpress:D6RG14 Bgee:D6RG14 Uniprot:D6RG14
Length = 87
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTF+KR+ GL KKA E + + +IA+++F+ + + S D V+ K+ N
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYN 73
>UNIPROTKB|D6RG21 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 EMBL:AC008525
EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C IPI:IPI00968000
ProteinModelPortal:D6RG21 SMR:D6RG21 Ensembl:ENST00000508610
HOGENOM:HOG000213989 ArrayExpress:D6RG21 Bgee:D6RG21 Uniprot:D6RG21
Length = 126
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTF+KR+ GL KKA E + + +IA+++F+ + + S D V+ K+ N
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYN 73
>UNIPROTKB|D6RJA7 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007521
"muscle cell fate determination" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0010629 "negative regulation
of gene expression" evidence=IEA] [GO:0010694 "positive regulation
of alkaline phosphatase activity" evidence=IEA] [GO:0014033 "neural
crest cell differentiation" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0030220 "platelet
formation" evidence=IEA] [GO:0030224 "monocyte differentiation"
evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0030501 "positive regulation of bone
mineralization" evidence=IEA] [GO:0030890 "positive regulation of B
cell proliferation" evidence=IEA] [GO:0033197 "response to vitamin
E" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IEA] [GO:0035984 "cellular response to trichostatin A"
evidence=IEA] [GO:0042100 "B cell proliferation" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045652 "regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050853 "B cell
receptor signaling pathway" evidence=IEA] [GO:0051145 "smooth
muscle cell differentiation" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060025 "regulation of
synaptic activity" evidence=IEA] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IEA] [GO:0060297
"regulation of sarcomere organization" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA] [GO:0071277 "cellular
response to calcium ion" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0071498 "cellular
response to fluid shear stress" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071864 "positive regulation of
cell proliferation in bone marrow" evidence=IEA] [GO:0072102
"glomerulus morphogenesis" evidence=IEA] [GO:0072160 "nephron
tubule epithelial cell differentiation" evidence=IEA] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=IEA] [GO:2000111 "positive regulation of macrophage
apoptotic process" evidence=IEA] [GO:2000727 "positive regulation
of cardiac muscle cell differentiation" evidence=IEA] [GO:2000987
"positive regulation of behavioral fear response" evidence=IEA]
[GO:2001013 "epithelial cell proliferation involved in renal tubule
morphogenesis" evidence=IEA] [GO:0000165 "MAPK cascade"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0001782
"B cell homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0002062
"chondrocyte differentiation" evidence=IEA] [GO:0002467 "germinal
center formation" evidence=IEA] [GO:0002634 "regulation of germinal
center formation" evidence=IEA] [GO:0003138 "primary heart field
specification" evidence=IEA] [GO:0003139 "secondary heart field
specification" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003185 "sinoatrial valve
morphogenesis" evidence=IEA] [GO:0003211 "cardiac ventricle
formation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0000165
GO:GO:0071277 GO:GO:0043524 GO:GO:0003682 GO:GO:0071222
GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0007611
GO:GO:0000987 GO:GO:0035690 GO:GO:0048666 GO:GO:0001974
GO:GO:0030890 GO:GO:0010694 GO:GO:0030501 GO:GO:0045669
GO:GO:0051145 GO:GO:0002467 GO:GO:0045666 SUPFAM:SSF55455
GO:GO:0001568 GO:GO:0001947 GO:GO:0006959 GO:GO:0001649
GO:GO:0060021 GO:GO:0002062 GO:GO:0050680 GO:GO:0014898
GO:GO:0035914 GO:GO:0003151 GO:GO:0030318 GO:GO:0000977
GO:GO:0001782 GO:GO:0001046 GO:GO:0050853 GO:GO:0042100
GO:GO:0002634 GO:GO:0060045 GO:GO:0001958 GO:GO:0030224
GO:GO:0003139 GO:GO:2000111 GO:GO:0048703 GO:GO:0060536
GO:GO:0090073 GO:GO:2000987 GO:GO:2000727 GO:GO:0030220
GO:GO:0060025 GO:GO:0071498 GO:GO:0007521 GO:GO:0071864
GO:GO:0045652 HOGENOM:HOG000230620 GO:GO:0003211 GO:GO:0035984
GO:GO:2001013 GO:GO:0072102 GO:GO:0072160 GO:GO:0014033
GO:GO:0003138 GO:GO:0060297 GO:GO:0003185 GO:GO:0055012
EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C
IPI:IPI00964921 ProteinModelPortal:D6RJA7 SMR:D6RJA7
Ensembl:ENST00000502831 ArrayExpress:D6RJA7 Bgee:D6RJA7
Uniprot:D6RJA7
Length = 98
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTF+KR+ GL KKA E + + +IA+++F+ + + S D V+ K+ N
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYN 73
>UNIPROTKB|Q9ZS26 [details] [associations]
symbol:gglo1 "MADS-box protein, GGLO1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009726 ProteinModelPortal:Q9ZS26 IntAct:Q9ZS26
Uniprot:Q9ZS26
Length = 197
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/144 (20%), Positives = 72/144 (50%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAV--IDKFLSVNGGA 59
VT+SKR+ G+ KKA+E + + ++++++ +G Y + SP + + +D++ ++G
Sbjct: 19 VTYSKRKNGIIKKAKEITVLCDANVSLVIYGSSGKMYEYCSPKTNLIDMLDRYQRLSGNK 78
Query: 60 SSSGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCR-GF--LMALEDKIKRCRSAEDLS 116
+ NE D + + H D+ + L+A ED ++ L+
Sbjct: 79 LWDAKHENLQNEIDRIKKENESMQIELRHLKGEDITSLNYEELIAYEDALEN-----GLT 133
Query: 117 AVKAELEEVRVKVLQRLKHIEEDE 140
++ + +E+ K++++ + + E+E
Sbjct: 134 NIREKKDEIP-KIMRKHEQVLEEE 156
>UNIPROTKB|D6RCM6 [details] [associations]
symbol:MEF2C "Myocyte-specific enhancer factor 2C"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 SUPFAM:SSF55455 HOGENOM:HOG000230620
EMBL:AC008525 EMBL:AC008835 HGNC:HGNC:6996 ChiTaRS:MEF2C
IPI:IPI00964067 ProteinModelPortal:D6RCM6 SMR:D6RCM6
Ensembl:ENST00000502983 ArrayExpress:D6RCM6 Bgee:D6RCM6
Uniprot:D6RCM6
Length = 129
Score = 93 (37.8 bits), Expect = 0.00013, P = 0.00013
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTF+KR+ GL KKA E + + +IA+++F+ + + S D V+ K+ N
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYN 73
>TAIR|locus:2173522 [details] [associations]
symbol:AGL8 "AGAMOUS-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009911 "positive regulation of flower development"
evidence=TAS] [GO:0010077 "maintenance of inflorescence meristem
identity" evidence=IGI] [GO:0031540 "regulation of anthocyanin
biosynthetic process" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0010154 "fruit development" evidence=IMP]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 GO:GO:0010077
KO:K09264 EMBL:U33473 EMBL:AB008269 EMBL:AF386929 EMBL:AY072463
IPI:IPI00522952 PIR:S71208 RefSeq:NP_568929.1 UniGene:At.5426
ProteinModelPortal:Q38876 SMR:Q38876 IntAct:Q38876 STRING:Q38876
EnsemblPlants:AT5G60910.1 GeneID:836212 KEGG:ath:AT5G60910
GeneFarm:3484 TAIR:At5g60910 InParanoid:Q38876 OMA:DSCMERI
PhylomeDB:Q38876 ProtClustDB:CLSN2690058 Genevestigator:Q38876
GermOnline:AT5G60910 GO:GO:0048830 GO:GO:0010154 GO:GO:0010093
Uniprot:Q38876
Length = 242
Score = 99 (39.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS-FDAVIDKF 52
VTFSKRR GL KKA E + + +++A++VFS G + + + S + +++++
Sbjct: 19 VTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERY 70
Score = 34 (17.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 121 ELEEVRVKVLQRLKHIEEDEFVTSL 145
+L+ + +K LQ L+H + D + S+
Sbjct: 116 DLDSLSLKELQSLEH-QLDAAIKSI 139
>TAIR|locus:505006709 [details] [associations]
symbol:AGL42 "AGAMOUS-like 42" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0009838 "abscission" evidence=IMP] [GO:0010150
"leaf senescence" evidence=IMP] [GO:0080187 "floral organ
senescence" evidence=IMP] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 HOGENOM:HOG000155301 SUPFAM:SSF55455 HSSP:Q02078
GO:GO:0009909 EMBL:AB016880 GO:GO:0080187 EMBL:AY054220
EMBL:AY065206 EMBL:AY066035 EMBL:AY096509 EMBL:AY141213
IPI:IPI00526027 RefSeq:NP_001032123.1 RefSeq:NP_568952.1
RefSeq:NP_851247.1 UniGene:At.26394 ProteinModelPortal:Q9FIS1
SMR:Q9FIS1 IntAct:Q9FIS1 STRING:Q9FIS1 EnsemblPlants:AT5G62165.1
EnsemblPlants:AT5G62165.2 EnsemblPlants:AT5G62165.3 GeneID:836337
KEGG:ath:AT5G62165 TAIR:At5g62165 InParanoid:Q9FIS1 OMA:EASHMIT
PhylomeDB:Q9FIS1 ProtClustDB:CLSN2690064 ArrayExpress:Q9FIS1
Genevestigator:Q9FIS1 GO:GO:0009838 Uniprot:Q9FIS1
Length = 210
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 36/142 (25%), Positives = 63/142 (44%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GL KKA E + + +Q+++++FS G Y S I+++ +
Sbjct: 19 VTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSSDMQKTIERYRKYTKDHET 78
Query: 62 SG---QVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAV 118
S Q+ + + T L L+ H + L I C S E+L +
Sbjct: 79 SNHDSQIHLQQLKQEASHMITKIEL-LEFHKRKL---------LGQGIASC-SLEELQEI 127
Query: 119 KAELEEVRVKVLQRLKHIEEDE 140
++L+ KV +R + +++
Sbjct: 128 DSQLQRSLGKVRERKAQLFKEQ 149
>TAIR|locus:2098826 [details] [associations]
symbol:AGL13 "AGAMOUS-like 13" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL137898
eggNOG:COG5068 HOGENOM:HOG000155301 SUPFAM:SSF55455 EMBL:U20183
IPI:IPI00520452 PIR:T47904 RefSeq:NP_191671.1 UniGene:At.968
ProteinModelPortal:Q38837 SMR:Q38837 IntAct:Q38837 STRING:Q38837
PRIDE:Q38837 EnsemblPlants:AT3G61120.1 GeneID:825284
KEGG:ath:AT3G61120 GeneFarm:3547 TAIR:At3g61120 InParanoid:Q38837
OMA:KLETEDH PhylomeDB:Q38837 ProtClustDB:CLSN2915737
Genevestigator:Q38837 GermOnline:AT3G61120 Uniprot:Q38837
Length = 244
Score = 104 (41.7 bits), Expect = 0.00015, P = 0.00015
Identities = 31/141 (21%), Positives = 66/141 (46%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKR+ GL KKA E + + +++++++FS G Y + I+++
Sbjct: 19 VTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYRCKDNLLD 78
Query: 62 SGQVGAHHN-EADVCRTPTPFHLVLQNHHN-EADVCRGFLMALEDKIKRCRSAED-LSAV 118
+ + +V + + +L+ H N + G M++++ R E LSA
Sbjct: 79 NDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEG--MSIKELQTLERQLEGALSAT 136
Query: 119 KAELEEVRVKVLQRLKHIEED 139
+ + +V ++ ++ L+ E +
Sbjct: 137 RKQKTQVMMEQMEELRRKERE 157
>TAIR|locus:2140578 [details] [associations]
symbol:STK "AT4G09960" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048440 "carpel development" evidence=IMP]
[GO:0048481 "ovule development" evidence=IGI;RCA;IMP] [GO:0048316
"seed development" evidence=IGI] [GO:0080155 "regulation of double
fertilization forming a zygote and endosperm" evidence=IGI]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0048441 "petal
development" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] [GO:0048507 "meristem development" evidence=RCA]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 EMBL:CP002687 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048316 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0048481 GO:GO:0080155 EMBL:AL161516
OMA:NENIYLR GO:GO:0048283 IPI:IPI00846258 RefSeq:NP_001078364.1
UniGene:At.2918 ProteinModelPortal:A8MQL9 SMR:A8MQL9 STRING:A8MQL9
EnsemblPlants:AT4G09960.3 GeneID:826586 KEGG:ath:AT4G09960
ProtClustDB:CLSN2685652 Genevestigator:A8MQL9 Uniprot:A8MQL9
Length = 256
Score = 104 (41.7 bits), Expect = 0.00017, P = 0.00017
Identities = 34/144 (23%), Positives = 69/144 (47%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF---LSVNGG 58
VTF KRR GL KKA E + + +++A++VFS G Y + + + + I+++ S +
Sbjct: 45 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTN 104
Query: 59 ASSSGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRSAEDLSAV 118
S+ ++ A + + + + + ++ N L E K R + +S +
Sbjct: 105 TSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRI 164
Query: 119 KAELEE---VRVKVLQRLKHIEED 139
+++ E V ++ Q+ + IE D
Sbjct: 165 RSKKHELLLVEIENAQK-REIELD 187
>TAIR|locus:2137070 [details] [associations]
symbol:AGL14 "AGAMOUS-like 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 EMBL:AL078606 EMBL:AL161532 EMBL:U20184
IPI:IPI00525134 PIR:T09347 RefSeq:NP_192925.1 UniGene:At.42992
ProteinModelPortal:Q38838 SMR:Q38838 IntAct:Q38838 STRING:Q38838
EnsemblPlants:AT4G11880.1 GeneID:826795 KEGG:ath:AT4G11880
GeneFarm:3502 TAIR:At4g11880 InParanoid:Q38838 OMA:RTYTREN
PhylomeDB:Q38838 ProtClustDB:CLSN2685538 Genevestigator:Q38838
GermOnline:AT4G11880 Uniprot:Q38838
Length = 221
Score = 103 (41.3 bits), Expect = 0.00017, P = 0.00017
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS 44
VTFSKRR GL KKA E + + +++A+++FSP G Y S S
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSS 61
>CGD|CAL0001975 [details] [associations]
symbol:MCM1 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:1900461 "positive regulation of pseudohyphal
growth by positive regulation of transcription from RNA polymerase
II promoter" evidence=IGI;IMP] [GO:2000220 "regulation of
pseudohyphal growth" evidence=IGI;IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001197 "positive regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031494 "regulation of mating type switching" evidence=IEA]
[GO:0090282 "positive regulation of transcription involved in
G2/M-phase of mitotic cell cycle" evidence=IEA] [GO:0006270 "DNA
replication initiation" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900466 "positive
regulation of arginine biosynthetic process by positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:1900465 "negative regulation of arginine catabolic process by
negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0044377 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding, bending" evidence=IEA] [GO:0001133 "sequence-specific
transcription regulatory region DNA binding RNA polymerase II
transcription factor recruiting transcription factor activity"
evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432
CGD:CAL0001975 GO:GO:0009405 GO:GO:0003677 GO:GO:0007155
GO:GO:0003700 GO:GO:0006351 GO:GO:0000790 eggNOG:COG5068
SUPFAM:SSF55455 EMBL:AACQ01000024 GO:GO:1900461 GO:GO:0044182
RefSeq:XP_720319.1 RefSeq:XP_888720.1 ProteinModelPortal:Q5AFP3
SMR:Q5AFP3 STRING:Q5AFP3 GeneID:3638050 GeneID:3704001
KEGG:cal:CaO19.7025 KEGG:cal:CaO19_7025 KO:K12412 Uniprot:Q5AFP3
Length = 262
Score = 104 (41.7 bits), Expect = 0.00018, P = 0.00018
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
+TFSKR+ G+ KKA E + +TG+Q+ +LV S G Y +P ++ K
Sbjct: 76 ITFSKRKAGIMKKAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTK 125
>UNIPROTKB|Q5AFP3 [details] [associations]
symbol:MCM1 "Transcription factor of morphogenesis MCM1"
species:237561 "Candida albicans SC5314" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900461 "positive regulation of pseudohyphal
growth by positive regulation of transcription from RNA polymerase
II promoter" evidence=IGI] [GO:2000220 "regulation of pseudohyphal
growth" evidence=IGI] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS50066 SMART:SM00432 CGD:CAL0001975
GO:GO:0009405 GO:GO:0003677 GO:GO:0007155 GO:GO:0003700
GO:GO:0006351 GO:GO:0000790 eggNOG:COG5068 SUPFAM:SSF55455
EMBL:AACQ01000024 GO:GO:1900461 GO:GO:0044182 RefSeq:XP_720319.1
RefSeq:XP_888720.1 ProteinModelPortal:Q5AFP3 SMR:Q5AFP3
STRING:Q5AFP3 GeneID:3638050 GeneID:3704001 KEGG:cal:CaO19.7025
KEGG:cal:CaO19_7025 KO:K12412 Uniprot:Q5AFP3
Length = 262
Score = 104 (41.7 bits), Expect = 0.00018, P = 0.00018
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
+TFSKR+ G+ KKA E + +TG+Q+ +LV S G Y +P ++ K
Sbjct: 76 ITFSKRKAGIMKKAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTK 125
>UNIPROTKB|Q40882 [details] [associations]
symbol:fbp11 "Fbp11 protein" species:4102 "Petunia x
hybrida" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078 EMBL:X81852
ProteinModelPortal:Q40882 IntAct:Q40882 Uniprot:Q40882
Length = 228
Score = 103 (41.3 bits), Expect = 0.00019, P = 0.00019
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTF KRR GL KKA E + + ++IA++VFS G Y + + + I+++ S+
Sbjct: 19 VTFCKRRNGLLKKAYELSVLCDAEIALIVFSTRGRVYEYANNNIKGTIERYKKATAETSN 78
Query: 62 S 62
+
Sbjct: 79 A 79
>UNIPROTKB|D2T2F9 [details] [associations]
symbol:grcd5 "GRCD5 protein" species:18101 "Gerbera hybrid
cultivar" [GO:0005515 "protein binding" evidence=IPI] [GO:0042802
"identical protein binding" evidence=IPI] InterPro:IPR002100
InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 EMBL:FN297861 IntAct:D2T2F9 Uniprot:D2T2F9
Length = 252
Score = 103 (41.3 bits), Expect = 0.00024, P = 0.00024
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVH-GSPSFDAVIDKFLSVNGGAS 60
VTF+KRR GL KKA E + + +++A+++FS G Y S S ++++ N GA
Sbjct: 19 VTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAP 78
Query: 61 SSGQVGA 67
V A
Sbjct: 79 DQTNVSA 85
>TAIR|locus:2029411 [details] [associations]
symbol:AGL67 "AGAMOUS-like 67" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009686
"gibberellin biosynthetic process" evidence=RCA] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 SMART:SM00432 EMBL:CP002684 GO:GO:0005829
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
SUPFAM:SSF55455 IPI:IPI00544332 RefSeq:NP_001117616.1
RefSeq:NP_177918.2 UniGene:At.34362 UniGene:At.52553
ProteinModelPortal:F4I8L6 SMR:F4I8L6 EnsemblPlants:AT1G77950.1
EnsemblPlants:AT1G77950.2 GeneID:844130 KEGG:ath:AT1G77950
OMA:CEANLIN ArrayExpress:F4I8L6 Uniprot:F4I8L6
Length = 252
Score = 89 (36.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVH-GSPSFDAVIDKFLSV 55
+TFSKR++GL KKA E + + +A+L+FSP+ + G + V+ +++++
Sbjct: 19 ITFSKRKKGLIKKAYELSTLCDIDLALLMFSPSDRLCLFSGQTRIEDVLARYINL 73
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 99 LMALEDKIKRCRSAEDLSAVKAELEEVRVKVLQRLKHI 136
L E R S E++ A +A L +V+QR +H+
Sbjct: 149 LRKFEPDPMRLTSMEEIEACEANLINTLTRVVQRREHL 186
>TAIR|locus:2028830 [details] [associations]
symbol:CAL "CAULIFLOWER" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009911 "positive regulation of flower
development" evidence=TAS] [GO:0010582 "floral meristem
determinacy" evidence=IEP] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
eggNOG:COG5068 SUPFAM:SSF55455 GO:GO:0010582 KO:K09264
GO:GO:0048830 GO:GO:0010093 ProtClustDB:CLSN2682513 EMBL:L36925
EMBL:AB493477 EMBL:AF061401 EMBL:AF061402 EMBL:AF061403
EMBL:AF061404 EMBL:AF061405 EMBL:AF061406 EMBL:AF061407
EMBL:AF061408 EMBL:AF061409 EMBL:AF061410 EMBL:AF061411
EMBL:AF061412 EMBL:AF061413 EMBL:AF061414 EMBL:AF061415
IPI:IPI00538144 PIR:E86389 RefSeq:NP_564243.1 UniGene:At.41269
ProteinModelPortal:Q39081 SMR:Q39081 IntAct:Q39081 STRING:Q39081
EnsemblPlants:AT1G26310.1 GeneID:839172 KEGG:ath:AT1G26310
GeneFarm:3483 TAIR:At1g26310 InParanoid:Q39081 OMA:ESEGNWC
PhylomeDB:Q39081 Genevestigator:Q39081 GermOnline:AT1G26310
Uniprot:Q39081
Length = 255
Score = 103 (41.3 bits), Expect = 0.00025, P = 0.00025
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS-FDAVIDKF 52
VTFSKRR GL KKAQE + + ++++++VFS G + + S S + V++++
Sbjct: 19 VTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERY 70
>UNIPROTKB|Q9ZS25 [details] [associations]
symbol:gsqua1 "MADS-box protein, GSQUA1" species:18101
"Gerbera hybrid cultivar" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319
Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066
PROSITE:PS51297 SMART:SM00432 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 SUPFAM:SSF55455 HSSP:Q02078
EMBL:AJ009727 ProteinModelPortal:Q9ZS25 IntAct:Q9ZS25
Uniprot:Q9ZS25
Length = 210
Score = 100 (40.3 bits), Expect = 0.00050, P = 0.00050
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS-FDAVIDKF 52
VTFSKRR GL KKA E + + +++A++VFS G + + + S + ++D++
Sbjct: 19 VTFSKRRGGLLKKAHEISVLCDAEVALIVFSAKGKLFEYSTDSCMENILDRY 70
>UNIPROTKB|D2T2F8 [details] [associations]
symbol:grcd4 "GRCD4 protein" species:18101 "Gerbera hybrid
cultivar" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002100 InterPro:IPR002487 Pfam:PF00319 Pfam:PF01486
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 PROSITE:PS51297
SMART:SM00432 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 EMBL:FN297860 IntAct:D2T2F8
Uniprot:D2T2F8
Length = 249
Score = 101 (40.6 bits), Expect = 0.00054, P = 0.00054
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVH-GSPSFDAVIDKFLSVNGGAS 60
VTF+KRR GL KKA E + + +++A+++FS G Y S S ++K+ S + G+
Sbjct: 19 VTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLEKYHSCSYGSL 78
Query: 61 SSGQ 64
+ Q
Sbjct: 79 KASQ 82
>TAIR|locus:2044259 [details] [associations]
symbol:SEP4 "SEPALLATA 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0010076 "maintenance of floral meristem identity"
evidence=IMP] [GO:0048440 "carpel development" evidence=RCA;IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048443 "stamen development"
evidence=IMP] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] InterPro:IPR002100 InterPro:IPR002487
Pfam:PF00319 Pfam:PF01486 PRINTS:PR00404 PROSITE:PS00350
PROSITE:PS50066 PROSITE:PS51297 SMART:SM00432 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048443 eggNOG:COG5068 HOGENOM:HOG000155301
SUPFAM:SSF55455 GO:GO:0010076 EMBL:U81369 EMBL:AY141229
EMBL:AC006836 EMBL:AY063894 EMBL:AY096386 IPI:IPI00517975
IPI:IPI00518345 IPI:IPI00527847 PIR:S57793 RefSeq:NP_178466.1
RefSeq:NP_849930.1 RefSeq:NP_973411.1 UniGene:At.10200
ProteinModelPortal:P29383 SMR:P29383 IntAct:P29383 STRING:P29383
EnsemblPlants:AT2G03710.1 GeneID:814898 KEGG:ath:AT2G03710
GeneFarm:3499 TAIR:At2g03710 InParanoid:P29383 OMA:EIALLIF
PhylomeDB:P29383 ProtClustDB:CLSN2683849 Genevestigator:P29383
GO:GO:0048440 GO:GO:0048441 GO:GO:0048442 Uniprot:P29383
Length = 258
Score = 101 (40.6 bits), Expect = 0.00058, P = 0.00058
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVH-GSPSFDA-VIDKF 52
VTF+KRR GL KKA E + + ++IA+L+FS G Y SPS A +DK+
Sbjct: 19 VTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKY 71
>TAIR|locus:2157874 [details] [associations]
symbol:AGL83 "AGAMOUS-like 83" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR002100
Pfam:PF00319 PROSITE:PS50066 SMART:SM00432 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 SUPFAM:SSF55455 eggNOG:KOG0014 EMBL:AB023033
IPI:IPI00518668 RefSeq:NP_199760.1 UniGene:At.55456
ProteinModelPortal:Q9FGZ5 SMR:Q9FGZ5 IntAct:Q9FGZ5 STRING:Q9FGZ5
EnsemblPlants:AT5G49490.1 GeneID:835009 KEGG:ath:AT5G49490
TAIR:At5g49490 PhylomeDB:Q9FGZ5 Genevestigator:Q9FGZ5
Uniprot:Q9FGZ5
Length = 285
Score = 101 (40.6 bits), Expect = 0.00071, P = 0.00071
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNP----YVHGSPSFDAVIDKFLS 54
VT +KRR+GLF KA + ++ +QIA+L P Y G S DAV+ FLS
Sbjct: 62 VTCTKRREGLFSKASQLCLLSDAQIAILATPPTSESNISFYSFGHSSVDAVVSSFLS 118
>UNIPROTKB|A2ICN5 [details] [associations]
symbol:MEF2A "Myocyte-specific enhancer factor 2A"
species:9823 "Sus scrofa" [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0048813 "dendrite
morphogenesis" evidence=ISS] [GO:0061337 "cardiac conduction"
evidence=ISS] [GO:0055005 "ventricular cardiac myofibril
development" evidence=ISS] [GO:0048311 "mitochondrion distribution"
evidence=ISS] [GO:0000002 "mitochondrial genome maintenance"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0046332 "SMAD
binding" evidence=ISS] [GO:0033613 "activating transcription factor
binding" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] [GO:0035035 "histone acetyltransferase binding"
evidence=ISS] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISS]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=ISS] [GO:0071277 "cellular response to
calcium ion" evidence=ISS] [GO:0070375 "ERK5 cascade" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0000165 "MAPK cascade"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR002100 Pfam:PF00319
PRINTS:PR00404 PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
GO:GO:0005634 GO:GO:0006915 GO:GO:0071277 GO:GO:0045944
GO:GO:0000122 GO:GO:0048813 GO:GO:0000981 GO:GO:0000002
GO:GO:0046332 SUPFAM:SSF55455 GO:GO:0042826 GO:GO:0035035
GO:GO:0000977 GO:GO:0048311 GO:GO:0061337 GO:GO:0033613
InterPro:IPR022102 Pfam:PF12347 CTD:4205 HOVERGEN:HBG053944
KO:K09260 GO:GO:0070375 GO:GO:0055005 HOGENOM:HOG000230620
EMBL:EF194143 EMBL:EF576922 EMBL:EF576923 RefSeq:NP_001090890.1
RefSeq:NP_001093168.1 UniGene:Ssc.19462 ProteinModelPortal:A2ICN5
SMR:A2ICN5 STRING:A2ICN5 GeneID:100037273 KEGG:ssc:100037273
eggNOG:NOG317450 Uniprot:A2ICN5
Length = 507
Score = 103 (41.3 bits), Expect = 0.00079, P = 0.00079
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN----G 57
VTF+KR+ GL KKA E + + +IA+++F+ + + + S D V+ K+ N
Sbjct: 19 VTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHES 78
Query: 58 GASSSGQVGAHHNEADVCRTPTP-FHLVLQNHHNE 91
G +S + E C +P P VL H E
Sbjct: 79 GTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEE 113
>DICTYBASE|DDB_G0281387 [details] [associations]
symbol:srfA "SRF-related protein" species:44689
"Dictyostelium discoideum" [GO:0042244 "spore wall assembly"
evidence=IMP] [GO:0031289 "actin phosphorylation" evidence=IMP]
[GO:0031247 "actin rod assembly" evidence=IMP] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS;IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IMP] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR002100 Pfam:PF00319 PRINTS:PR00404
PROSITE:PS00350 PROSITE:PS50066 SMART:SM00432
dictyBase:DDB_G0281387 GO:GO:0005634 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0040011 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 EMBL:AAFI02000041 eggNOG:COG5068 SUPFAM:SSF55455
HSSP:P11831 GO:GO:0031154 GO:GO:0042244 GO:GO:0031247 KO:K12412
GO:GO:0031289 EMBL:AJ224893 RefSeq:XP_640674.1
ProteinModelPortal:Q54TY7 SMR:Q54TY7 STRING:Q54TY7
EnsemblProtists:DDB0214892 GeneID:8623058 KEGG:ddi:DDB_G0281387
OMA:ASPNQFN ProtClustDB:CLSZ2430546 Uniprot:Q54TY7
Length = 418
Score = 102 (41.0 bits), Expect = 0.00086, P = 0.00086
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
+TFSKR+ G+ KKA E + +TG+Q+ +LV S G+ Y + +I +
Sbjct: 85 ITFSKRKAGIMKKAYELSTLTGTQVLLLVASETGHVYTFATAKLQPLITR 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 148 148 0.00068 104 3 11 22 0.45 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 80
No. of states in DFA: 547 (58 KB)
Total size of DFA: 126 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.70u 0.10s 17.80t Elapsed: 00:00:02
Total cpu time: 17.71u 0.10s 17.81t Elapsed: 00:00:02
Start: Mon May 20 15:58:06 2013 End: Mon May 20 15:58:08 2013