BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032052
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GLFKKA E + G++I ++VFSPA P+ G PS ++V+D+++S N + +
Sbjct: 80 VTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYVSRNNMSLA 139
Query: 62 SGQ 64
Q
Sbjct: 140 QSQ 142
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN 56
VTFSKRR GLFKKA E + G+++A++VFSP + G P+ D+VID+F++ N
Sbjct: 24 VTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFINNN 78
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GL KKA+E A + +++ V++FS G Y S S +VI+++ G SS
Sbjct: 19 VTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYSDAKGETSS 78
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR G+FKKA+E A + +++ +++FS G Y + S S +VID++
Sbjct: 19 VTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRY 69
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNG---G 58
VTFSKRR GL KKA+E + + +++ ++VFS G Y S + VID++ + G
Sbjct: 19 VTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTNAKEELLG 78
Query: 59 ASSSGQVGAHHNEADVCRTPTPFHLVLQNHHNE----------ADVCRGFLMALEDKIKR 108
+++ ++ EA R H LQ H + +G LE ++
Sbjct: 79 GNATSEIKIWQREAASLR--QQLH-NLQESHKQLMGEELSGLGVRDLQGLENRLEISLRN 135
Query: 109 CRSAEDLSAVKAELEEVRVKVLQRLKHIEEDEFVTSL 145
R +D + +K+E+EE+ VK L H E E SL
Sbjct: 136 IRMRKD-NLLKSEIEELHVK--GSLIHQENIELSRSL 169
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF----LSVNG 57
VTFSKRR+GL KKA+E A + +++ +++FS G Y S S +VID++ +
Sbjct: 19 VTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQ 78
Query: 58 GASSSGQVGAHHNEADVCRTPTPFHLVLQNH 88
+ + +V EA V R H + +NH
Sbjct: 79 LLNPASEVKFWQREAAVLR--QELHALQENH 107
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR+GLFKKA+E + + + +A++VFS G S S + +IDK+
Sbjct: 19 VTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKY 69
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR+GLFKKA+E + + +++ ++VFS G + S S + +ID++
Sbjct: 38 VTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRY 88
>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
GN=MADS55 PE=2 SV=2
Length = 245
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR+GLFKKA+E A + + +A++VFS G S + + +IDK+
Sbjct: 19 VTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKY 69
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLS--VNGGA 59
VTFSKRR GL KKA E + + +++A+++FS G Y GS + ++K+ S N
Sbjct: 19 VTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQG 78
Query: 60 SSSGQVGAHH 69
S+S G H
Sbjct: 79 SNSALAGGEH 88
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTF KRR GL KKA E + + +++A++VFS G Y + + S + ++++ N S+
Sbjct: 19 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKSTVERYKKANSDTSN 78
Query: 62 SG---QVGAHH 69
SG +V A H
Sbjct: 79 SGTVAEVNAQH 89
>sp|Q84NC2|MAD31_ORYSJ MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica
GN=MADS31 PE=2 SV=1
Length = 178
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDA--VIDKFL 53
VTFSKRR GL KKA E A + +QI V+VFS G Y + SP + + D++L
Sbjct: 19 VTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYL 72
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGS-PSFDAVIDKF 52
VTFSKRR GL KKA E + + +++A++VFSP G Y S PS ID++
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRY 70
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGS-PSFDAVIDKF 52
VTFSKRR GL KKA E + + +++A++VFSP G Y S PS ID++
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRY 70
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFL 53
VTFSKRR GL KKA E + + +++++++FSP G Y S + ID++L
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYL 70
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GLFKKA+E + + +++ +LVFS Y S S ++I+++
Sbjct: 19 VTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERY 69
>sp|Q38841|AGL12_ARATH Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana
GN=AGL12 PE=2 SV=2
Length = 211
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPY-VHGSPSFDAVIDKFLSVNGGAS 60
VTF KRR GL KKA+E + + ++I V++FSP G + + + + +IDK++ GG
Sbjct: 19 VTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGR 78
Query: 61 SS 62
S
Sbjct: 79 GS 80
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR+G+FKKA E + + + +A+++FS G + S ++
Sbjct: 19 VTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMRDIL------------ 66
Query: 62 SGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGFLMALEDKIKRCRS--AEDLSAVK 119
G+ H + + P HL L+N ++ R +EDK K+ R EDL +
Sbjct: 67 -GRYSLHASNINKLMDPPSTHLRLEN----CNLSR-LSKEVEDKTKQLRKLRGEDLDGLN 120
Query: 120 AELEEVRVKVLQRLKHIEE 138
LEE LQRL+ + E
Sbjct: 121 --LEE-----LQRLEKLLE 132
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS-FDAVIDKF 52
VTFSKRR GL KKA E + + +++A +VFSP G Y + + S D +++++
Sbjct: 19 VTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERY 70
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA E + + +++A++VFSP G Y S S I+++
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERY 69
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVN---GG 58
VTF KRR GL KKA E + + +++A++VFS G Y + + S I+++ N
Sbjct: 61 VTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIERYKKANSDTSN 120
Query: 59 ASSSGQVGAHHNEADVCR 76
AS+ ++ A H + + +
Sbjct: 121 ASTVAEINAQHYQQEAAK 138
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
VTFSKRR+GLFKKA+E + + + +A+++FS G + + S S ++++
Sbjct: 19 VTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILER 68
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFL-----SVN 56
VTF KRR GL KKA E + + +++A++VFS G Y + + S A I+++ S N
Sbjct: 35 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSN 94
Query: 57 GGASSSGQVGAHHNEADVCR 76
G+ S + EA R
Sbjct: 95 TGSISEANAQYYQQEASKLR 114
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2
SV=1
Length = 248
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFL-----SVN 56
VTF KRR GL KKA E + + +++A++VFS G Y + + S A I+++ S N
Sbjct: 35 VTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIERYKKACSDSSN 94
Query: 57 GGASSSGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVCRGF----LMALEDKIKRCRSA 112
G+ S + EA R +L+ QN + + G L LE +I++ S
Sbjct: 95 TGSVSEANAQYYQQEASKLRAQIG-NLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISK 153
Query: 113 EDLSAVKAELEEVRVKVLQR 132
+ + K EL ++ +Q+
Sbjct: 154 --IRSKKNELLFAEIEYMQK 171
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSP--SFDAVIDKFLSVNG 57
VTFSKRR G+ KKA+E + + +++ V++FS AG Y + SP S +++K+ + +G
Sbjct: 19 VTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSG 76
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTF KRR GL KKA E + + +++A++VFS G Y + + S A I+++ +S+
Sbjct: 35 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSN 94
Query: 62 SGQVG 66
+G +
Sbjct: 95 TGSIA 99
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA+E A + + + ++VFS G Y S S ++I+++
Sbjct: 19 VTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERY 69
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA E + + +++A+++FS G Y GS ++ I+++
Sbjct: 19 VTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERY 69
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA E + + +++A+++FSP Y S S A I+++
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERY 69
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 25/135 (18%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VTFSKRR GL KKA+E + + +++A+++FS G Y S + ++ ++ G ++
Sbjct: 19 VTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSVCMEQILSRY-----GYTT 73
Query: 62 SGQVGAHHNEADVCRTPTPFHLVLQNHHNEA-----DVCRGFLMALEDKIKRCRSAE--- 113
+ E + L+ +H NEA D +G L L+ I+R + E
Sbjct: 74 ASTEHKQQREHQL--------LICASHGNEAVLRNDDSMKGELERLQLAIERLKGKELEG 125
Query: 114 ----DLSAVKAELEE 124
DL +++ +L E
Sbjct: 126 MSFPDLISLENQLNE 140
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
VTFSKRR+GLFKKA+E + + + +A+++FS G + S S V+++
Sbjct: 19 VTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLER 68
>sp|Q54RY6|SRFB_DICDI Serum response factor homolog B OS=Dictyostelium discoideum GN=srfB
PE=3 SV=1
Length = 467
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
+TFSKR+ G+ KKA E + +TG+Q+ ++V S G+ Y +P +I K
Sbjct: 54 ITFSKRKSGIMKKAYELSTLTGTQVLLIVASETGHVYTFATPKLQPLITK 103
>sp|Q8RVL4|DEF21_ANTMA MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1
Length = 247
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFD--AVIDKFLSVNG-G 58
VTFSKRR GL KK E + + +QI ++VFS G + +P F +ID+++ G
Sbjct: 19 VTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGIL 78
Query: 59 ASSSGQVGAHHNEADVCRTPT 79
+ G H + V + T
Sbjct: 79 PEMENRAGPHADNDQVIKELT 99
>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
PE=1 SV=1
Length = 208
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFD--AVIDKFLSVNG 57
VTFSKRR GL KKA+E + +++A+++F+ G + PS D A++D++ ++G
Sbjct: 19 VTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSG 76
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 1 MVTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGAS 60
VTFSKRR GL KKA+E + + +++AV+VFS +G + + S + ++ G
Sbjct: 18 QVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRY----GNHQ 73
Query: 61 SSGQVGAHHNEADV 74
SS A + A+V
Sbjct: 74 SSSASKAEEDCAEV 87
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR+GL KKA+E A + +++ +++FS Y S S + I++F
Sbjct: 19 VTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERF 69
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVH-GSPSFDAVIDKFLSVNGGAS 60
VTF KRR GL KKA E + + +++A++VFS G Y + + + A ID++ + S
Sbjct: 19 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGS 78
Query: 61 SSG 63
+SG
Sbjct: 79 TSG 81
>sp|P0C5B1|MAD14_ORYSI MADS-box transcription factor 14 OS=Oryza sativa subsp. indica
GN=MADS14 PE=2 SV=1
Length = 246
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS-FDAVIDKF 52
VTFSKRR GL KKA E + + +++A+++FS G Y + + S D +++++
Sbjct: 19 VTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERY 70
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana
GN=ANR1 PE=1 SV=1
Length = 234
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGS-PSFDAVIDKF 52
VTFSKRR GL KKA+E + + +++ V++FS G Y + S S +I+++
Sbjct: 19 VTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASNSSMKTIIERY 70
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS-FDAVIDKF 52
VTFSKRR GL KKA E + + +++A+++FS G Y + + S D +++++
Sbjct: 19 VTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERY 70
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1
Length = 252
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF---LSVNGG 58
VTF KRR GL KKA E + + +++A++VFS G Y + + S I+++ +S N
Sbjct: 35 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSN 94
Query: 59 ASSSGQVGAHHNEADVCR 76
S ++ A + + + +
Sbjct: 95 TGSVAEINAQYYQQESAK 112
>sp|P11746|MCM1_YEAST Pheromone receptor transcription factor OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MCM1 PE=1
SV=2
Length = 286
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDK 51
VTFSKR+ G+ KKA E + +TG+Q+ +LV S G Y +P F+ ++ +
Sbjct: 34 VTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIVTQ 83
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGN--PYVHGSPSFDAVIDKFLSVNGG 58
VTFSKRR GL KKA E + + +++ +++FS +G Y S S +I+++ V+G
Sbjct: 19 VTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGA 77
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA E + + +++A+++FS G Y GS ++++
Sbjct: 19 VTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERY 69
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1
SV=2
Length = 252
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF---LSVNGG 58
VTF KRR GL KKA E + + +++A++VFS G Y + + S I+++ +S N
Sbjct: 35 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSN 94
Query: 59 ASSSGQVGAHHNEADVCR 76
S ++ A + + + +
Sbjct: 95 TGSVAEINAQYYQQESAK 112
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKF 52
VTFSKRR GL KKA E + + +++AV+VFS +G + S S + ++
Sbjct: 19 VTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLLRY 69
>sp|Q03488|FBP1_PETHY Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1
Length = 210
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSVNGGASS 61
VT+SKRR G+ KKA+E + + ++++V++F+ +G + S S ++D++ + G
Sbjct: 19 VTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTGRRLL 78
Query: 62 SGQVGAHHNEADVCRTPTPFHLVLQNHHNEADVC---RGFLMALEDKIKRCRSAEDLSAV 118
+ NE + + + H D+ LM LED ++ L+++
Sbjct: 79 DAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENG-----LTSI 133
Query: 119 KAELEEVRVKVLQRLKHIEEDEFVTSLLNC 148
+ + EV + ++ + +EE++ LNC
Sbjct: 134 RNKQNEVLRMMRKKTQSMEEEQ---DQLNC 160
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPSFDAVIDKFLSV---NGG 58
VTF KRR GL KKA E + + +++A++VFS G Y + + S I+++ +
Sbjct: 35 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPN 94
Query: 59 ASSSGQVGAHHNEADVCRTPTPFHLVLQNHHN---------EADVCRGFLMALEDKIKRC 109
SS + A + + + + +N+ N +G LE I R
Sbjct: 95 TSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRI 154
Query: 110 RSAEDLSAVKAELEEVRVK 128
RS ++ + AE+E ++ K
Sbjct: 155 RSKKN-ELLFAEIEYMQKK 172
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGSPS 44
VTFSKRR GL KKA E + + +++A+++FSP G Y S S
Sbjct: 19 VTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSS 61
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 2 VTFSKRRQGLFKKAQEYANITGSQIAVLVFSPAGNPYVHGS-PSFDAVIDKF 52
VTFSKRR GLFKKA E + + +++A++VFS G + + + P + +++++
Sbjct: 19 VTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDPCMEKILERY 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,520,661
Number of Sequences: 539616
Number of extensions: 2111236
Number of successful extensions: 5878
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 5704
Number of HSP's gapped (non-prelim): 206
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)