Query         032061
Match_columns 148
No_of_seqs    113 out of 1027
Neff          9.3 
Searched_HMMs 13730
Date          Mon Mar 25 14:34:55 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032061.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032061hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2b5ti1 e.1.1.1 (I:6-431) Anti 100.0 1.3E-31 9.4E-36  206.9  13.8  142    4-147    44-195 (426)
  2 g1hle.1 e.1.1.1 (A:,B:) Elasta 100.0 3.6E-31 2.6E-35  201.3  13.0  141    3-147     1-146 (375)
  3 d1jmja_ e.1.1.1 (A:) Heparin c 100.0 3.3E-31 2.4E-35  204.3  12.7  142    3-147    44-197 (420)
  4 d1lj5a_ e.1.1.1 (A:) Plasminog 100.0 8.5E-31 6.2E-35  199.4  11.6  140    4-147     6-150 (379)
  5 g1as4.1 e.1.1.1 (A:,B:) Antich 100.0 2.3E-30 1.7E-34  196.4  13.7  138    6-147     2-147 (369)
  6 d1by7a_ e.1.1.1 (A:) Plasminog 100.0 1.3E-30 9.5E-35  198.6  10.1  140    4-147     1-149 (381)
  7 d1k9oi_ e.1.1.1 (I:) Alaserpin 100.0 6.4E-31 4.7E-35  200.0   8.0  137    6-147     9-149 (376)
  8 d1qlpa_ e.1.1.1 (A:) Antitryps 100.0   1E-29 7.4E-34  192.9  14.4  140    4-147     2-149 (372)
  9 d1xqga_ e.1.1.1 (A:) Maspin {H 100.0 9.3E-31 6.8E-35  199.2   7.8  141    3-147     4-149 (378)
 10 d1uhga_ e.1.1.1 (A:) Ovalbumin 100.0 6.8E-30   5E-34  194.8  12.7  138    6-147     3-159 (385)
 11 g1lq8.1 e.1.1.1 (A:,B:) Protei 100.0 5.1E-30 3.7E-34  193.8  11.1  133   11-147     2-142 (358)
 12 d1imva_ e.1.1.1 (A:) Pigment e 100.0 7.3E-30 5.3E-34  194.6  11.5  139    3-147    16-159 (383)
 13 g1mtp.1 e.1.1.1 (A:,B:) Thermo 100.0   2E-28 1.5E-32  184.9  11.3  131    6-147     4-139 (355)
 14 g1jjo.1 e.1.1.1 (A:,C:,E:) Neu  99.9 7.6E-25 5.6E-29  164.0   7.4  100   10-147     2-105 (334)
 15 g1m93.1 e.1.1.1 (A:,B:,C:) Vir  99.9 2.1E-22 1.5E-26  149.9   7.6  101   15-147     1-104 (322)
 16 d1t6sa1 a.4.5.60 (A:1-85) Segr  80.6     3.1 0.00022   23.0   6.4   71   41-117    12-83  (85)
 17 d1vi7a2 d.58.11.2 (A:138-208)   65.6     2.8  0.0002   22.1   2.9   44  103-147    10-65  (71)
 18 d1l3la1 a.4.6.2 (A:170-234) Qu  49.3      14   0.001   18.8   4.4   37   43-80     11-47  (65)
 19 d1jhfa1 a.4.5.2 (A:2-72) LexA   44.7      17  0.0013   18.9   3.9   28   50-77     23-50  (71)
 20 d1nexa1 a.157.1.1 (A:116-185)   33.9     9.7  0.0007   20.1   1.6   23   44-66     38-60  (70)
 21 d1skyb1 a.69.1.1 (B:372-502) F  32.3      38  0.0027   19.9   4.5   40    6-52     34-73  (131)
 22 d1a04a1 a.4.6.2 (A:150-216) Ni  30.9      32  0.0023   17.4   3.7   36   45-81     15-50  (67)
 23 d1aisb1 a.74.1.2 (B:1108-1205)  29.6      41   0.003   18.2   6.2   71    7-81     19-91  (98)
 24 d1fsea_ a.4.6.2 (A:) Germinati  28.0      36  0.0026   17.1   4.4   37   44-81     12-48  (67)
 25 d1ku9a_ a.4.5.36 (A:) DNA-bind  27.9      53  0.0038   19.0   4.9   43   35-78     25-67  (151)
 26 d1i8ya_ g.3.16.1 (A:) N-termin  24.4     6.5 0.00048   16.4  -0.2   14   27-40     10-23  (28)
 27 d1vola1 a.74.1.2 (A:113-207) T  24.3      52  0.0038   17.7   7.9   71    7-81     19-91  (95)
 28 d1fs1b1 a.157.1.1 (B:86-140) C  24.1      18  0.0013   18.0   1.5   17   46-62     39-55  (55)
 29 d2jdia1 a.69.1.1 (A:380-510) F  23.8     9.5 0.00069   22.7   0.4   19   34-52     55-73  (131)
 30 d1kbha_ a.153.1.1 (A:) Nuclear  23.2      18  0.0013   17.3   1.3   23   42-64     13-35  (47)
 31 d1vola2 a.74.1.2 (A:208-316) T  20.3      70  0.0051   17.7   7.8   69    8-80     19-89  (109)

No 1  
>d2b5ti1 e.1.1.1 (I:6-431) Antithrombin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.3e-31  Score=206.89  Aligned_cols=142  Identities=23%  Similarity=0.390  Sum_probs=124.5

Q ss_pred             HhhhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCCh-----HHHHHHHHHHHH
Q 032061            4 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSD-----DQLNTFASELVA   78 (148)
Q Consensus         4 ~~~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~-----~~~~~~~~~l~~   78 (148)
                      .+|+.++++||++||+++....++++|+||||+||+.+|+||+.||+|+|++||.++|+++..     ++++..++.+..
T Consensus        44 ~~l~~~~~~Fa~~l~~~l~~~~~~~~N~v~SP~si~~aLa~l~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~l~~  123 (426)
T d2b5ti1          44 WELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNC  123 (426)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTGGGSCHHHHHTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECHHHHHHHHHHHHHhCchHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHH
Confidence            468999999999999999853367899999999999999999999999999999999998732     357888888888


Q ss_pred             HHhhCCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCcc-c----chhHHHhhcCCccC
Q 032061           79 VVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVK-T----LSWYTTVIHEGLKF  147 (148)
Q Consensus        79 ~l~~~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~-~----N~wv~~~T~g~I~~  147 (148)
                      .+..  .......+.++|++|++++++++++|++.++++|+++++.+||.+.+. +    |.||+++|+|+|+.
T Consensus       124 ~l~~--~~~~~~~l~~an~l~v~~~~~~~~~f~~~~~~~y~a~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~  195 (426)
T d2b5ti1         124 RLYR--KANKASKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITD  195 (426)
T ss_dssp             HHTS--CCCSSEEEEEEEEEEEETTSCCCHHHHHHHHHHHSSCCEEECTTTCHHHHHHHHHHHHHHHTTTSCSC
T ss_pred             HHhc--cCCCCcEEeeeehhhhcccccchHHHHHHHHHhcCCeEEEecccccHHHHHHHHHHHHHHhcCCCccC
Confidence            7763  234456799999999999999999999999999999999999987543 2    99999999999974


No 2  
>g1hle.1 e.1.1.1 (A:,B:) Elastase inhibitor {Horse (Equus caballus) [TaxId: 9796]}
Probab=99.97  E-value=3.6e-31  Score=201.26  Aligned_cols=141  Identities=21%  Similarity=0.280  Sum_probs=127.5

Q ss_pred             hHhhhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 032061            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFA   82 (148)
Q Consensus         3 ~~~~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~~   82 (148)
                      +++|..++++||++||+.+.+. ++++|+|+||+||+.+|+|++.||.|+|++||.++|+++..++++..++.+...+..
T Consensus         1 ~~~~~~a~~~Fa~~l~k~~~~~-~~~~N~v~SP~si~~~L~~l~~GA~g~T~~el~~~L~~~~~~~~~~~~~~l~~~~~~   79 (375)
T g1hle.1           1 MEQLSTANTHFAVDLFRALNES-DPTGNIFISPLSISSALAMIFLGTRGNTAAQVSKALYFDTVEDIHSRFQSLNADINK   79 (375)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHH-CSSSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHHTGGGSTTHHHHHHHHHHHHTC
T ss_pred             ChHHHHHHHHHHHHHHHHHHhh-CCCCCEEECHHHHHHHHHHHHHhCChHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence            4689999999999999998774 788999999999999999999999999999999999998666788888888888763


Q ss_pred             CCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCcc-c----chhHHHhhcCCccC
Q 032061           83 DGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVK-T----LSWYTTVIHEGLKF  147 (148)
Q Consensus        83 ~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~-~----N~wv~~~T~g~I~~  147 (148)
                         ...+..+.++|++|++++++++++|.+.++++|+++++.+||.+.++ +    |.||+++|+|+|+.
T Consensus        80 ---~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~dF~~~~~~a~~~IN~wv~~~T~g~I~~  146 (375)
T g1hle.1          80 ---PGAPYILKLANRLYGEKTYNFLADFLASTQKMYGAELASVDFQQAPEDARKEINEWVKGQTEGKIPE  146 (375)
T ss_dssp             ---SSCSSEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTTCHHHHHHHHHHHHHHHTTTSSSC
T ss_pred             ---CCCCcEEEEecccccccCCccCHHHHHHHHhhccceEeeccccccHHHHHHHHHHHHHHhhcCcccc
Confidence               44567899999999999999999999999999999999999988643 2    99999999999974


No 3  
>d1jmja_ e.1.1.1 (A:) Heparin cofactor II (Hc-II, leuserpin 2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=3.3e-31  Score=204.29  Aligned_cols=142  Identities=21%  Similarity=0.246  Sum_probs=126.3

Q ss_pred             hHhhhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCC---------hHHHHHHH
Q 032061            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS---------DDQLNTFA   73 (148)
Q Consensus         3 ~~~~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~---------~~~~~~~~   73 (148)
                      ++++...+++||++||+.+..+.++++|+|+||+||+.+|+|++.||+|.|++||.++|+++.         ..+++..|
T Consensus        44 ~~~l~~~n~~F~~~ly~~l~~~~~~~~Niv~SP~si~~aLaml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~i~~~~  123 (420)
T d1jmja_          44 IQRLNILNAKFAFNLYRVLKDQVNTFDNIFIAPVGISTAMGMISLGLKGETHEQVHSILHFKDFVNASSKYEITTIHNLF  123 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSCTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTHHHHHHHCTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCcEEECHHHHHHHHHHHHhhcchhHHHHHHHHcCCCCcCCcccchhHHHHHHHH
Confidence            467888899999999999986435678999999999999999999999999999999999852         24688889


Q ss_pred             HHHHHHHhhCCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCccc---chhHHHhhcCCccC
Q 032061           74 SELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVKT---LSWYTTVIHEGLKF  147 (148)
Q Consensus        74 ~~l~~~l~~~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~---N~wv~~~T~g~I~~  147 (148)
                      +.+.+.+..   ...++.+.++|++|+++++++.++|.+.++++|+++++.+||.++..+   |.||+++|+|+|+.
T Consensus       124 ~~l~~~l~~---~~~~~~l~~an~l~v~~~~~~~~~f~~~~~~~y~a~~~~~df~~~~~~~~IN~wv~~~T~g~I~~  197 (420)
T d1jmja_         124 RKLTHRLFR---RNFGYTLRSVNDLYIQKQFPILLDFKTKVREYYFAEAQIADFSDPAFISKTNNHIMKLTKGLIKD  197 (420)
T ss_dssp             HHHHHHHHS---CCSSEEEEEEEEEEEETTSCCCHHHHHHHHHHSSCCEEEECTTCHHHHHHHHHHHHHHTTTSCCC
T ss_pred             HHHHHHHhc---CCCCcEehhhHHHHhhCCccccHHHHHHHHHhhCceeeccccchHHHHHHHhHhHHhccCCcccc
Confidence            999888874   345678999999999999999999999999999999999999987654   99999999999974


No 4  
>d1lj5a_ e.1.1.1 (A:) Plasminogen activator inhibitor-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=8.5e-31  Score=199.40  Aligned_cols=140  Identities=20%  Similarity=0.329  Sum_probs=125.2

Q ss_pred             HhhhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCCh-HHHHHHHHHHHHHHhh
Q 032061            4 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSD-DQLNTFASELVAVVFA   82 (148)
Q Consensus         4 ~~~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~-~~~~~~~~~l~~~l~~   82 (148)
                      ..++++.++||++||+.+.+. .+++|+|+||+||+.+|+||+.||+|.|++||.++|+++.. .+++..++.+...+..
T Consensus         6 ~~~~~~~~~F~~~l~~~l~~~-~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~l~~   84 (379)
T d1lj5a_           6 SYVAHLASDFGVRVFQQVAQA-SKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMG   84 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-STTBCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTSCTTSTTHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhHHHHHHHHHHHhh-CcCCcEEECHHHHHHHHHHHHHhCCcHHHHHHHHHhCCCCChHHHHHHHHHHHHHhhC
Confidence            457889999999999999874 67899999999999999999999999999999999998743 4577888888888763


Q ss_pred             CCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCccc----chhHHHhhcCCccC
Q 032061           83 DGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVKT----LSWYTTVIHEGLKF  147 (148)
Q Consensus        83 ~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~----N~wv~~~T~g~I~~  147 (148)
                         ......+.++|++|+++++++.++|.+.++++|+++++.+||.++..+    |.||+++|+|+|+.
T Consensus        85 ---~~~~~~l~~an~l~v~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~a~~~IN~wv~~~T~g~I~~  150 (379)
T d1lj5a_          85 ---PWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISN  150 (379)
T ss_dssp             ---GGGSSEEEEEEEEEEETTSCCCTTHHHHHHHHHSCCCEEECTTSHHHHHHHHHHHHHHTTTTSCCC
T ss_pred             ---cccccchhhhhHHHHhccCcccHHHHHHHHHhhcceeccccccchHHHHHHHHHHHHhhcCCcccc
Confidence               344678999999999999999999999999999999999999887665    99999999999974


No 5  
>g1as4.1 e.1.1.1 (A:,B:) Antichymotrypsin, alpha-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=2.3e-30  Score=196.36  Aligned_cols=138  Identities=26%  Similarity=0.377  Sum_probs=125.0

Q ss_pred             hhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCC----hHHHHHHHHHHHHHHh
Q 032061            6 SISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----DDQLNTFASELVAVVF   81 (148)
Q Consensus         6 ~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~----~~~~~~~~~~l~~~l~   81 (148)
                      |+.++++||++||+++... .+++|+||||+||+.+|+|++.||.|.|++||.++|+++.    ..+++..++.+++.+.
T Consensus         2 l~~~~~~Fa~~l~~~l~~~-~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~   80 (369)
T g1as4.1           2 LASANVDFAFSLYKQLVLK-APDKNVIFSPLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAEIHQSFQHLLRTLN   80 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-CTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHHhh-CCCCCEEECHHHHHHHHHHHHHhcChHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            6789999999999999874 7899999999999999999999999999999999999863    3468888999998886


Q ss_pred             hCCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCccc----chhHHHhhcCCccC
Q 032061           82 ADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVKT----LSWYTTVIHEGLKF  147 (148)
Q Consensus        82 ~~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~----N~wv~~~T~g~I~~  147 (148)
                      +   ...+..+.++|++|+++++++.++|.+.++++|+++++.+||.++..+    |.||+++|+|+|+.
T Consensus        81 ~---~~~~~~l~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~vdf~~~~~~~~~IN~wv~~~T~g~i~~  147 (369)
T g1as4.1          81 Q---SSDELQLSMGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLINDYVKNGTRGKITD  147 (369)
T ss_dssp             E---ECSSCEEEEEEEEEEETTCCCCHHHHHHHHHHHCCEEEEECTTSHHHHHHHHHHHHHHHTTTSCCC
T ss_pred             c---CCCchhhHHHHHHHHhccCcccHHHHHHHHhhhCcceeeehhhhhHHHHHHHHHHHHhhcCCCcCC
Confidence            4   345678999999999999999999999999999999999999887665    99999999999973


No 6  
>d1by7a_ e.1.1.1 (A:) Plasminogen activator inhibitor-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1.3e-30  Score=198.59  Aligned_cols=140  Identities=26%  Similarity=0.372  Sum_probs=121.4

Q ss_pred             HhhhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCC----hHHHHHHHHHHHHH
Q 032061            4 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----DDQLNTFASELVAV   79 (148)
Q Consensus         4 ~~~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~----~~~~~~~~~~l~~~   79 (148)
                      ++|..++++||++||+++.+. .+++|+|+||+||+.+|+||+.||+|.|++||.++|+++.    .++++..++.+.+.
T Consensus         1 ~~l~~~~~~Fa~~L~~~l~~~-~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~   79 (381)
T d1by7a_           1 EDLCVANTLFALNLFKHLAKA-SPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMAKVLQFNEVGAAADKIHSSFRSLSSA   79 (381)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH-SSSSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTCCG-GGHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHhc-CCCCcEEECHHHHHHHHHHHHHhcchHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence            368899999999999999874 7899999999999999999999999999999999999874    24688889999888


Q ss_pred             HhhCCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCc-cc----chhHHHhhcCCccC
Q 032061           80 VFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKV-KT----LSWYTTVIHEGLKF  147 (148)
Q Consensus        80 l~~~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~-~~----N~wv~~~T~g~I~~  147 (148)
                      +..   ...+..+.++|.+|++++++++++|.+.++++|++++..+||.+.. .+    |.||+++|+|+|+.
T Consensus        80 l~~---~~~~~~~~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~I~~  149 (381)
T d1by7a_          80 INA---STGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLECAEEARKKINSWVKTQTKGKIPN  149 (381)
T ss_dssp             HC---------CEEEEEEEEEETTSCBCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred             Hhc---CCCCcEEeeccchhcccCCccCHHHHHHHHHhhCCceeccccccchHHHHHHHHHHHHHhhcCCccc
Confidence            863   3456779999999999999999999999999999999999998753 22    99999999999973


No 7  
>d1k9oi_ e.1.1.1 (I:) Alaserpin (serpin 1) {Tobacco hornworm (Manduca sexta) [TaxId: 7130]}
Probab=99.96  E-value=6.4e-31  Score=199.99  Aligned_cols=137  Identities=22%  Similarity=0.310  Sum_probs=121.0

Q ss_pred             hhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHhhCCC
Q 032061            6 SISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGS   85 (148)
Q Consensus         6 ~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~~~~~   85 (148)
                      +.+++++||++||+++.+. ++++|+|+||+||+.+|+||+.||.|.|++||.++|+++........+..+...+.    
T Consensus         9 l~~~~~~F~~~l~~~~~~~-~~~~N~v~SP~si~~~La~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~~~----   83 (376)
T d1k9oi_           9 LRESNDQFTAQMFSEVVKA-NPGQNVVLSAFSVLPPLGQLALASVGESHDELLRALALPNDNVTKDVFADLNRGVR----   83 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-STTSCEEECSGGGHHHHHHHTTTBCTHHHHHHHHHTTCSCTTHHHHHHHHHTSSCS----
T ss_pred             HHHHHHHHHHHHHHHHHhh-CCCCeEEECHHHHHHHHHHHHHhcChHHHHHHHHHcCCCCcchHHHHHHHHHHHHh----
Confidence            7888999999999999874 77899999999999999999999999999999999999876555666665544442    


Q ss_pred             CCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCccc----chhHHHhhcCCccC
Q 032061           86 PSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVKT----LSWYTTVIHEGLKF  147 (148)
Q Consensus        86 ~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~----N~wv~~~T~g~I~~  147 (148)
                      ...+..+.++|++|++++++++++|.+.++++|+++++.+||.+++.+    |.||+++|+|+|+.
T Consensus        84 ~~~~~~~~~~~~i~~~~~~~~~~~f~~~~~~~y~~~~~~vdf~~~~~a~~~IN~wv~~~T~g~I~~  149 (376)
T d1k9oi_          84 AVKGVDLKMASKIYVAKGLELNDDFAAVSRDVFGSEVQNVDFVKSVEAAGAINKWVEDQTNNRIKN  149 (376)
T ss_dssp             CCSSBCCEEEEEEEEESSCCBCSGGGSTTTSSSCCCEEEECTTSHHHHHHHHHHHHHHHTTTSSCC
T ss_pred             hcCCCcEEEeeehhhhcCCCcchHHHHHHHhhcCceeecccccccHHHHHHHHHHHHHhhCCceee
Confidence            334567999999999999999999999999999999999999987765    99999999999973


No 8  
>d1qlpa_ e.1.1.1 (A:) Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1e-29  Score=192.91  Aligned_cols=140  Identities=23%  Similarity=0.367  Sum_probs=125.7

Q ss_pred             HhhhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCC----hHHHHHHHHHHHHH
Q 032061            4 RESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----DDQLNTFASELVAV   79 (148)
Q Consensus         4 ~~~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~----~~~~~~~~~~l~~~   79 (148)
                      .+++++.++||++||+.+... .+++|+||||+||+.+|+|++.||+|.|++||.++|+++.    ..+++..++.+.+.
T Consensus         2 ~~~~~~~~~Fa~~l~~~l~~~-~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~   80 (372)
T d1qlpa_           2 NKITPNLAEFAFSLYRQLAHQ-SNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRT   80 (372)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHH-CSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHH
T ss_pred             chhhHhHHHHHHHHHHHHhhh-CCCCcEEECHHHHHHHHHHHHHhccHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHH
Confidence            478899999999999999775 7789999999999999999999999999999999999873    35678888888888


Q ss_pred             HhhCCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCccc----chhHHHhhcCCccC
Q 032061           80 VFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVKT----LSWYTTVIHEGLKF  147 (148)
Q Consensus        80 l~~~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~----N~wv~~~T~g~I~~  147 (148)
                      +..   +..+..+.++|++|+++++++.++|.+.++++|+++++.+||.++..+    |.||+++|+|+|+-
T Consensus        81 ~~~---~~~~~~l~~~n~i~~~~~~~l~~~f~~~~~~~f~~~~~~~df~~~~~~~~~iN~wv~~~T~g~i~~  149 (372)
T d1qlpa_          81 LNQ---PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVD  149 (372)
T ss_dssp             HSC---SSCCCCEEEEEEEEEETTCCBCHHHHHHHHHTSCCEEEEECTTSHHHHHHHHHHHHHHHTTTSSCS
T ss_pred             hhc---cCcchhhhhheeeeeccCCccCHHHHHHHHHHhCceeecccccchHHHHHHHHHHHHHHhCCCCcc
Confidence            763   445678999999999999999999999999999999999999877665    99999999999973


No 9  
>d1xqga_ e.1.1.1 (A:) Maspin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=9.3e-31  Score=199.21  Aligned_cols=141  Identities=21%  Similarity=0.249  Sum_probs=125.4

Q ss_pred             hHhhhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHhh
Q 032061            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFA   82 (148)
Q Consensus         3 ~~~~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~~   82 (148)
                      ++.+..++++||++||+.+... .+++|+|+||+||+.+|+|++.||+|.|+.||.++|++++..+++..++.+...+.+
T Consensus         4 ~~~l~~a~~~Fa~~L~~~l~~~-~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~   82 (378)
T d1xqga_           4 MDALQLANSAFAVDLFKQLSEK-EPLGNVLFSPIALSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVTSDVNK   82 (378)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHH-STTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTGGGCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh-CCCCcEEECHHHHHHHHHHHHHhCChHHHHHHHHHhCCCChHHHHHHHHHHHHHHhc
Confidence            4678899999999999999874 788999999999999999999999999999999999997555678888888887764


Q ss_pred             CCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCcc-c----chhHHHhhcCCccC
Q 032061           83 DGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVK-T----LSWYTTVIHEGLKF  147 (148)
Q Consensus        83 ~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~-~----N~wv~~~T~g~I~~  147 (148)
                         ......+.++|.+|++++++++++|.+.++++|+++++.+||.++.. +    |.||+++|+|+|+.
T Consensus        83 ---~~~~~~l~~~~~l~~~~~~~~~~~f~~~~~~~y~~~v~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~  149 (378)
T d1xqga_          83 ---LSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQINNSIKDLTDGHFEN  149 (378)
T ss_dssp             ---HTTTSSEEEEEEEEEETTSCCCHHHHHHTTTTTTTCEEEECHHHHHHHHHHHHHHHHHHHTTTSCSC
T ss_pred             ---ccCCceEEEeechhhcccccccHHHHHHhhhhccceeEeccccchhhHHHHHHHHHHHHhccCCccc
Confidence               23457899999999999999999999999999999999999977533 2    99999999999973


No 10 
>d1uhga_ e.1.1.1 (A:) Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]}
Probab=99.96  E-value=6.8e-30  Score=194.75  Aligned_cols=138  Identities=14%  Similarity=0.305  Sum_probs=122.4

Q ss_pred             hhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCC--------------hHHHHH
Q 032061            6 SISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS--------------DDQLNT   71 (148)
Q Consensus         6 ~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~--------------~~~~~~   71 (148)
                      +..++++||++||+.+... ++++|+|+||+||+.+|+|++.||+|.|++||.++|+++.              ..+++.
T Consensus         3 l~~~~~~Fa~~l~~~l~~~-~~~~N~v~SP~si~~~Laml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~   81 (385)
T d1uhga_           3 IGAASMEFCFDVFKELKVH-HANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGFGDSIEAQCGTSVNVHS   81 (385)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-CTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTCTTCTTCSHHHHTTTTSCTTTTH
T ss_pred             HHHHHHHHHHHHHHHHhcc-CcCCcEEECHHHHHHHHHHHHHhCChHHHHHHHHHhCCCCCccccchhhhhcccHHHHHH
Confidence            6789999999999998774 7889999999999999999999999999999999999863              124678


Q ss_pred             HHHHHHHHHhhCCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCcc-c----chhHHHhhcCCcc
Q 032061           72 FASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVK-T----LSWYTTVIHEGLK  146 (148)
Q Consensus        72 ~~~~l~~~l~~~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~-~----N~wv~~~T~g~I~  146 (148)
                      .++.+.+.+.+   +.+...+.++|++|++++++++++|.+.++++|+++++.+||..++. +    |.||+++|+|+|+
T Consensus        82 ~~~~~~~~~~~---~~~~~~l~~~~~l~v~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~i~  158 (385)
T d1uhga_          82 SLRDILNQITK---PNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWVESQTNGIIR  158 (385)
T ss_dssp             HHHHHHHHHTS---CCSSEEEEEEEEEEEETTSCBCHHHHHHHHHHCSSCEEEECCTTTHHHHHHHHHHHHHHHTTTCSC
T ss_pred             HHHHHHHHhhC---CCCCceEEEEEEEEEecCccccHHHHHHHHHHhCCcccccccccHHHHHHHHHHHHHHHHccCCcc
Confidence            88888888863   44566899999999999999999999999999999999999986554 2    9999999999997


Q ss_pred             C
Q 032061          147 F  147 (148)
Q Consensus       147 ~  147 (148)
                      .
T Consensus       159 ~  159 (385)
T d1uhga_         159 N  159 (385)
T ss_dssp             C
T ss_pred             c
Confidence            3


No 11 
>g1lq8.1 e.1.1.1 (A:,B:) Protein C inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=5.1e-30  Score=193.84  Aligned_cols=133  Identities=23%  Similarity=0.343  Sum_probs=119.1

Q ss_pred             HHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCC----hHHHHHHHHHHHHHHhhCCCC
Q 032061           11 TDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKS----DDQLNTFASELVAVVFADGSP   86 (148)
Q Consensus        11 ~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~----~~~~~~~~~~l~~~l~~~~~~   86 (148)
                      .+||++||+.+.+. .+++|+|+||+||+.+|+|++.||.|.|++||.++|+++.    ..+++..++.+++.+..   .
T Consensus         2 ~~F~~~l~~~l~~~-~~~~N~v~SP~si~~~L~~l~~gA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~   77 (358)
T g1lq8.1           2 RDFTFDLYRALASA-APSQNIFFSPVSISMSLAMLSLGAGSSTKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQ---P   77 (358)
T ss_dssp             CCHHHHHHHHHHHH-STTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHHTCCSSSSCTHHHHHHHHHHHHTCCC---C
T ss_pred             ccHHHHHHHHHHhh-CcCCCEEEcHHHHHHHHHHHHHhcChHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhC---C
Confidence            47999999999875 7899999999999999999999999999999999999873    35688888888877753   4


Q ss_pred             CCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCccc----chhHHHhhcCCccC
Q 032061           87 SGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVKT----LSWYTTVIHEGLKF  147 (148)
Q Consensus        87 ~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~----N~wv~~~T~g~I~~  147 (148)
                      .++..+.++|++|++++++++++|.+.++++|+++++.+||.++..+    |.||+++|+|+|+.
T Consensus        78 ~~~~~l~~~~~i~~~~~~~~~~~f~~~~~~~y~~~~~~vdf~~~~~~~~~IN~wv~~~T~g~I~~  142 (358)
T g1lq8.1          78 RDGFQLSLGNALFTDLVVDLQDTFVSAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVD  142 (358)
T ss_dssp             CSSEEEEEEEEEEEETTCCBCHHHHHHHHHTTCCEEEEECTTSHHHHHHHHHHHHHHHTTTSSCC
T ss_pred             CCcchhheeeehhhccccccchhHHHHHHHHhccccccccchhhHHHHHHHHHHHHHHhhccccc
Confidence            45678999999999999999999999999999999999999987655    99999999999974


No 12 
>d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=7.3e-30  Score=194.62  Aligned_cols=139  Identities=19%  Similarity=0.248  Sum_probs=123.0

Q ss_pred             hHhhhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCC--ChHHHHHHHHHHHHHH
Q 032061            3 VRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSK--SDDQLNTFASELVAVV   80 (148)
Q Consensus         3 ~~~~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~--~~~~~~~~~~~l~~~l   80 (148)
                      +++++.+.++||++||+.+... .+++|+|+||+||+.+|+||+.||+|.|++||.++|+++  ...+++..+++++..+
T Consensus        16 ~~~~~~~~~~F~~~L~~~l~~~-~~~~Niv~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~l~~~~   94 (383)
T d1imva_          16 VNKLAAAVSNFGYDLYRVRSSM-SPTTNVLLSPLSVATALSALSLGADERTESIIHRALYYDLISSPDIHGTYKELLDTV   94 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-CTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTGGGCCCSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc-CcCCcEEECHHHHHHHHHHHHHhcChHHHHHHHHHhCCCCCChHHHHHHHHHHHHhh
Confidence            5788999999999999999874 789999999999999999999999999999999999975  3346888899998888


Q ss_pred             hhCCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCccc---chhHHHhhcCCccC
Q 032061           81 FADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVKT---LSWYTTVIHEGLKF  147 (148)
Q Consensus        81 ~~~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~---N~wv~~~T~g~I~~  147 (148)
                      ..     ....+.++|+||++++++++++|.+.++++|+++++.+||.....+   |.||+++|+|+|+-
T Consensus        95 ~~-----~~~~l~~~n~i~v~~~~~~~~~f~~~~~~~y~~~~~~~~~~~~~~~~~IN~wv~~~T~g~I~~  159 (383)
T d1imva_          95 TA-----PQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLTGNPRLDLQEINNWVQAQMKGKLAR  159 (383)
T ss_dssp             TS-----TTSCEEEEEEEEECTTCCCCHHHHHHHHHHHCCCCEECCSCHHHHHHHHHHHHHHHTTTCSCC
T ss_pred             hc-----CCcchHHHHHHHhccCCccchHHHHHHHhhcCceeeeccccHHHHHHHHHHHHHhhCcccccc
Confidence            52     3456999999999999999999999999999999999998533322   99999999999973


No 13 
>g1mtp.1 e.1.1.1 (A:,B:) Thermopin {Thermobifida fusca [TaxId: 2021]}
Probab=99.95  E-value=2e-28  Score=184.91  Aligned_cols=131  Identities=18%  Similarity=0.336  Sum_probs=111.9

Q ss_pred             hhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHhhCCC
Q 032061            6 SISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGS   85 (148)
Q Consensus         6 ~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~~~~~   85 (148)
                      |...+.+||++||+.+.+. .+++|+|+||+||+.+|+||+.||+|+|++||.++|+++..+.    +..+.+.+     
T Consensus         4 ~~~~~~~Fa~~L~~~l~~~-~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~Lg~~~~~~----~~~~~~~~-----   73 (355)
T g1mtp.1           4 LRDDHLEFALHLHRRLAEA-VPDGEVIWSPYSVACALGVLAAGARATTRTELTTLLGTDPAPL----LAALDRAV-----   73 (355)
T ss_dssp             SCHHHHHHHHHHHHHHHHH-STTCCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHHTSCHHHH----HHHHHHHT-----
T ss_pred             hhhchhhHHHHHHHHHHhh-CCCCCEEECHHHHHHHHHHHHHhCchHHHHHHHHHHCCChHHH----HHHHHHHh-----
Confidence            4578899999999999885 7899999999999999999999999999999999999864322    22333333     


Q ss_pred             CCCCCeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCC-ccc----chhHHHhhcCCccC
Q 032061           86 PSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTK-VKT----LSWYTTVIHEGLKF  147 (148)
Q Consensus        86 ~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~-~~~----N~wv~~~T~g~I~~  147 (148)
                       .....+.++|++|+++++++.++|++.++++|+++++.+||.+. ..+    |.||+++|+|+|+.
T Consensus        74 -~~~~~l~~~n~l~v~~~~~~~~~f~~~~~~~~~~~~~~vdF~~~~~~~~~~IN~wv~~~T~g~I~~  139 (355)
T g1mtp.1          74 -TDSPDLASRTVLWVSADVPVRSSFRATMHDRPDSDVRTADFRTNPEGVRATVNADIADATRGMIRE  139 (355)
T ss_dssp             -CSCTTEEEEEEEEECTTSCBCHHHHHHHHHSTTCEEEECCTTTCHHHHHHHHHHHHHHHTTTSCSC
T ss_pred             -ccCccHhHhHHHHHHcccccchHHHHHHHHhccccccccccccChHHHHHHHHHHHHHhhcCCccc
Confidence             23567999999999999999999999999999999999999644 433    99999999999973


No 14 
>g1jjo.1 e.1.1.1 (A:,C:,E:) Neuroserpin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.90  E-value=7.6e-25  Score=163.96  Aligned_cols=100  Identities=24%  Similarity=0.464  Sum_probs=91.7

Q ss_pred             hHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHhhCCCCCCC
Q 032061           10 QTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGG   89 (148)
Q Consensus        10 ~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~~~~~~~~~   89 (148)
                      .++||++||+++... .+++|+|+||+||+.+|+|++.||+|+|.                                   
T Consensus         2 ~~~F~~~l~~~l~~~-~~~~N~v~SP~si~~~L~ml~~Ga~~~t~-----------------------------------   45 (334)
T g1jjo.1           2 ITEWSVNMYNHLRGT-GEDENILFSPLSIALAMGMMELGAENQYV-----------------------------------   45 (334)
T ss_dssp             HHHHHHHHTTTTTSS-SCCCCEEECHHHHHHHHHHHTTCCCCSSB-----------------------------------
T ss_pred             HHHHHHHHHHHHhcc-CCCCcEEECHHHHHHHHHHHHhhcCCcHH-----------------------------------
Confidence            589999999999874 67899999999999999999999999773                                   


Q ss_pred             CeeEeeeeeeecCCCCCChhHHHHHHhhccccceEecCCCCccc----chhHHHhhcCCccC
Q 032061           90 PRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVKT----LSWYTTVIHEGLKF  147 (148)
Q Consensus        90 ~~l~~~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~----N~wv~~~T~g~I~~  147 (148)
                        ++++|+||++++++++++|++.++++|+++++.+||.++..+    |.||+++|+|+|+.
T Consensus        46 --~~l~n~l~v~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~~~~~IN~wv~~~T~g~I~~  105 (334)
T g1jjo.1          46 --MKLANSLFVQNGFHVNEEFLQMLKMYFNAEVNHVDFSQNVAVANSINKWVENYTNSLLKD  105 (334)
T ss_dssp             --CCEEEEEEEESSCCCCHHHHHHHHHHTCCCEEEECTTSHHHHHHHHHHHHHHHSTTSCCC
T ss_pred             --HHHHhHeeecCCCCcCHHHHHHHHHHhCCeeEEEcCcChHHHHHHHHHHHHHHhCccccc
Confidence              457999999999999999999999999999999999987655    99999999999973


No 15 
>g1m93.1 e.1.1.1 (A:,B:,C:) Viral serpin crmA (cytokine response modifier protein) {Cowpox virus [TaxId: 10243]}
Probab=99.86  E-value=2.1e-22  Score=149.87  Aligned_cols=101  Identities=21%  Similarity=0.347  Sum_probs=89.9

Q ss_pred             HHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHhhCCCCCCCCeeEe
Q 032061           15 LSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSV   94 (148)
Q Consensus        15 ~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~l~~   94 (148)
                      ++||+++.+. .+++|+|+||+||+.+|+|++.||+|+|++||.++|+++                           ++.
T Consensus         1 l~l~k~l~~~-~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~---------------------------~~~   52 (322)
T g1m93.1           1 MDIFREIASS-MKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVDIS---------------------------FKS   52 (322)
T ss_dssp             CHHHHHHHHH-TTTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHTTCCCS---------------------------EEE
T ss_pred             CcHHHHHhcc-CCCCeEEECHHHHHHHHHHHHHHCCcHHHHHHHHHHCcC---------------------------HHH
Confidence            4799999885 788999999999999999999999999999999999763                           677


Q ss_pred             eeeeeecCCCCCChhHHHHHHhhccccceEecCCCCccc---chhHHHhhcCCccC
Q 032061           95 ANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKVKT---LSWYTTVIHEGLKF  147 (148)
Q Consensus        95 ~n~l~~~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~---N~wv~~~T~g~I~~  147 (148)
                      +|++|+++++.++++|.+.++..|    +.+||.++..+   |.||+++|+|+|+.
T Consensus        53 ~n~i~~~~~~~~~~~f~~~~~~~~----~~vdf~~~~~~~~IN~wv~~~T~g~I~~  104 (322)
T g1m93.1          53 MNKVYGRYSAVFKDSFLRKIGDNF----QTVDFTDSRTVDAINKSVDIFTEGKINP  104 (322)
T ss_dssp             EEEEEEETTSCBCHHHHHHHCSCE----EEECTTSTHHHHHHHHHHHHHTTTSSCC
T ss_pred             HHHHHHHccchhhHHHHHHhhhhe----EeccccCHHHHHHHHHHHHHhcCCeecc
Confidence            999999999999999998776654    67999887654   99999999999974


No 16 
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=80.65  E-value=3.1  Score=23.00  Aligned_cols=71  Identities=20%  Similarity=0.197  Sum_probs=46.4

Q ss_pred             HHHHHHcCCCCchHHHHHHhcCCC-ChHHHHHHHHHHHHHHhhCCCCCCCCeeEeeeeeeecCCCCCChhHHHHHHhh
Q 032061           41 LLSLISAGSKGPTLDQLLSFLKSK-SDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNV  117 (148)
Q Consensus        41 ~L~~l~~ga~g~T~~el~~~L~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~l~~~n~l~~~~~~~~~~~f~~~~~~~  117 (148)
                      .=++|+....+-|..+|.++++.+ +..++......|......   ...+..+.-.+.=|.   +..+++|...+++.
T Consensus        12 IEAlLFas~~Pls~~~L~~~l~~~~~~~~i~~~l~~L~~~y~~---~~~g~el~~~~~gy~---~~tk~e~~~~v~kl   83 (85)
T d1t6sa1          12 LEALIFSSEEPVNLQTLSQITAHKFTPSELQEAVDELNRDYEA---TGRTFRIHAIAGGYR---FLTEPEFADLVRQL   83 (85)
T ss_dssp             HHHHHHHCSSCBCHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH---HTCSEEEEEETTEEE---EEECGGGHHHHHHH
T ss_pred             HHHHHHhcCCCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHhc---CCCcEEEEEECCEEE---EEEhHHHHHHHHHH
Confidence            336677777899999999999854 345677777777776653   123455544444443   35677777777664


No 17 
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=65.57  E-value=2.8  Score=22.13  Aligned_cols=44  Identities=9%  Similarity=0.072  Sum_probs=30.0

Q ss_pred             CCCCChhHHHHHHhhccccceEecCCCCccc------------chhHHHhhcCCccC
Q 032061          103 SLSLKNTFKQVVDNVYKAASNQVDFQTKVKT------------LSWYTTVIHEGLKF  147 (148)
Q Consensus       103 ~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~------------N~wv~~~T~g~I~~  147 (148)
                      ++.....+...+.+ +++.+...+|.+....            ..|+.+.|+|+|..
T Consensus        10 dY~~~~~v~~~L~~-~~~~i~~~~y~~~V~l~v~vp~~~~~~f~~~l~d~t~G~v~~   65 (71)
T d1vi7a2          10 EYHQLTGIEALLGQ-CDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQL   65 (71)
T ss_dssp             CTTTHHHHHHHHHH-TTCEEEEEEESSSEEEEEEECSSTHHHHHHHHHHHHTTCCCC
T ss_pred             ccccHHHHHHHHHH-CCCEEEeeeeccEEEEEEEECHHHHHHHHHHHHHhCCCcEEE
Confidence            34444555555554 5777877888776543            88889999998863


No 18 
>d1l3la1 a.4.6.2 (A:170-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=49.35  E-value=14  Score=18.77  Aligned_cols=37  Identities=11%  Similarity=0.095  Sum_probs=27.7

Q ss_pred             HHHHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 032061           43 SLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVV   80 (148)
Q Consensus        43 ~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l   80 (148)
                      ..+.+-+.|.|..||.+.|+++ ...+....+.+...+
T Consensus        11 ~vl~l~~~G~s~~eIA~~l~iS-~~TV~~~~~~i~~Kl   47 (65)
T d1l3la1          11 TYLRWIAVGKTMEEIADVEGVK-YNSVRVKLREAMKRF   47 (65)
T ss_dssp             HHHHHHTTTCCHHHHHHHHTCC-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCHHHHHHHHCCC-HHHHHHHHHHHHHHc
Confidence            4556667899999999999987 345666666666655


No 19 
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=44.65  E-value=17  Score=18.92  Aligned_cols=28  Identities=18%  Similarity=0.165  Sum_probs=20.9

Q ss_pred             CCchHHHHHHhcCCCChHHHHHHHHHHH
Q 032061           50 KGPTLDQLLSFLKSKSDDQLNTFASELV   77 (148)
Q Consensus        50 ~g~T~~el~~~L~~~~~~~~~~~~~~l~   77 (148)
                      ..+|..||.+.+++.+...++.....|-
T Consensus        23 ~~Ps~rei~~~~g~~S~stv~~~l~~Le   50 (71)
T d1jhfa1          23 MPPTRAEIAQRLGFRSPNAAEEHLKALA   50 (71)
T ss_dssp             SCCCHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            3578899999999987666776655444


No 20 
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.89  E-value=9.7  Score=20.14  Aligned_cols=23  Identities=9%  Similarity=0.231  Sum_probs=17.4

Q ss_pred             HHHcCCCCchHHHHHHhcCCCCh
Q 032061           44 LISAGSKGPTLDQLLSFLKSKSD   66 (148)
Q Consensus        44 ~l~~ga~g~T~~el~~~L~~~~~   66 (148)
                      .++.=.+|+|.+||++.++.+.+
T Consensus        38 ~vA~~ikgkt~eeiR~~f~I~~D   60 (70)
T d1nexa1          38 VVAEMIRGRSPEEIRRTFNIVND   60 (70)
T ss_dssp             HHHHHHTTCCHHHHHHHHTCCCC
T ss_pred             HHHHHHccCCHHHHHHHhCCCCC
Confidence            33344478999999999998753


No 21 
>d1skyb1 a.69.1.1 (B:372-502) F1 ATP synthase alpha subunit, domain 3 {Bacillus sp., strain ps3 [TaxId: 1409]}
Probab=32.31  E-value=38  Score=19.87  Aligned_cols=40  Identities=13%  Similarity=0.121  Sum_probs=26.9

Q ss_pred             hhhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHcCCCCc
Q 032061            6 SISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGP   52 (148)
Q Consensus         6 ~~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~   52 (148)
                      -....-+=|-++-.-+.+    ..   +||+++.--.+++|.|.+|-
T Consensus        34 ~t~~~L~rG~rl~ElLKQ----~q---~sP~~v~eQv~iLyA~~~G~   73 (131)
T d1skyb1          34 ATQANVARGARTVEVLKQ----DL---HQPIPVEKQVLIIYALTRGF   73 (131)
T ss_dssp             HHHHHHHHHHHHHHHHCC----CT---TCCCCHHHHHHHHHHTTTTT
T ss_pred             HHHHHHHhhHHHHHHHhC----CC---CCCcCHHHHHHHHHHHhCCc
Confidence            334444455555555532    22   28999999999999998774


No 22 
>d1a04a1 a.4.6.2 (A:150-216) Nitrate/nitrite response regulator (NarL) {Escherichia coli [TaxId: 562]}
Probab=30.91  E-value=32  Score=17.40  Aligned_cols=36  Identities=6%  Similarity=0.084  Sum_probs=25.4

Q ss_pred             HHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 032061           45 ISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVF   81 (148)
Q Consensus        45 l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~   81 (148)
                      +.+-+.|.|..||.+.|+++ ...+......+...+.
T Consensus        15 l~ll~~G~s~~eIA~~l~iS-~~TV~~~~~~i~~Klg   50 (67)
T d1a04a1          15 LKLIAQGLPNKMIARRLDIT-ESTVKVHVKHMLKKMK   50 (67)
T ss_dssp             HHHHHTTCCHHHHHHHHTCC-HHHHHHHHHHHHHHHT
T ss_pred             HHHHHhCCCHHHHHHHHCCC-HHHHHHHHHHHHHHhC
Confidence            33445678999999999996 4466766666666553


No 23 
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=29.63  E-value=41  Score=18.25  Aligned_cols=71  Identities=10%  Similarity=0.009  Sum_probs=45.1

Q ss_pred             hhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHH--cCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 032061            7 ISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLIS--AGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVF   81 (148)
Q Consensus         7 ~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~--~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~   81 (148)
                      -+...+=|..+|+.+.+..--.+.   +|.++..+.--+.  .--...|..||.++++.+ ..++...|+.+...+.
T Consensus        19 ~~~i~~~A~~i~k~~~~~~~~~g~---~~~~iaaA~iY~Acr~~~~~~t~~eIa~~~~is-~~ti~k~yk~i~~~L~   91 (98)
T d1aisb1          19 PRHVEEEAARLYREAVRKGLIRGR---SIESVMAACVYAACRLLKVPRTLDEIADIARVD-KKEIGRSYRFIARNLN   91 (98)
T ss_dssp             CHHHHHHHHHHHHHHHTTTTTTTC---CHHHHHHHHHHHHHHHHTCCCCHHHHHHHTTSC-HHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHhhhhcCC---CHHHHHHHHHHHHHHHcCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHcC
Confidence            345566788999998753111122   4655543322222  223568899999999876 4578889998888764


No 24 
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=27.96  E-value=36  Score=17.11  Aligned_cols=37  Identities=11%  Similarity=0.028  Sum_probs=27.0

Q ss_pred             HHHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 032061           44 LISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVF   81 (148)
Q Consensus        44 ~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~   81 (148)
                      .+.+-+.|.|..||.+.|++. ...+....+.+...+.
T Consensus        12 vl~l~~~G~s~~eIA~~L~is-~~TV~~~~~~i~~Kl~   48 (67)
T d1fsea_          12 VFELLVQDKTTKEIASELFIS-EKTVRNHISNAMQKLG   48 (67)
T ss_dssp             HHHHHTTTCCHHHHHHHHTSC-HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHccCCHHHHHHHHCCC-HHHHHHHHHHHHHHcC
Confidence            344556889999999999986 4466776666666553


No 25 
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=27.90  E-value=53  Score=18.97  Aligned_cols=43  Identities=14%  Similarity=0.201  Sum_probs=30.1

Q ss_pred             cccHHHHHHHHHcCCCCchHHHHHHhcCCCChHHHHHHHHHHHH
Q 032061           35 PSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVA   78 (148)
Q Consensus        35 P~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~   78 (148)
                      |.+-+..++.|+..-.+-|..||.+.++.+ ...+....+.|..
T Consensus        25 ~~~~~~i~~~L~~~~~plt~~ela~~l~vs-k~~vs~~l~~L~~   67 (151)
T d1ku9a_          25 NKSVGAVYAILYLSDKPLTISDIMEELKIS-KGNVSMSLKKLEE   67 (151)
T ss_dssp             CHHHHHHHHHHHHCSSCEEHHHHHHHHTCC-HHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCCcCHHHHHHHhCCC-cchHHHHHHHHHH
Confidence            346677788887655667999999999997 3345555554544


No 26 
>d1i8ya_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Carp (Cyprinus carpio) [TaxId: 7962]}
Probab=24.38  E-value=6.5  Score=16.45  Aligned_cols=14  Identities=14%  Similarity=0.278  Sum_probs=10.1

Q ss_pred             CCCcEEEccccHHH
Q 032061           27 KDSNLVFSPSSIHV   40 (148)
Q Consensus        27 ~~~N~v~SP~si~~   40 (148)
                      .+..-.+||++||.
T Consensus        10 dgttc~lspygvw~   23 (28)
T d1i8ya_          10 DGTTCSLSPYGVWY   23 (28)
T ss_dssp             TTCEEEECTTSCEE
T ss_pred             CCCeEeccCcccEE
Confidence            34567889999863


No 27 
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.35  E-value=52  Score=17.66  Aligned_cols=71  Identities=8%  Similarity=0.076  Sum_probs=46.3

Q ss_pred             hhhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHH--cCCCCchHHHHHHhcCCCChHHHHHHHHHHHHHHh
Q 032061            7 ISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLIS--AGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVF   81 (148)
Q Consensus         7 ~~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~--~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l~   81 (148)
                      -....+-|..+|+.+....--.+.   +|-++..+.-.+.  .--...|..||.++.+.+ ..++...|+.+...+.
T Consensus        19 ~~~i~~~A~~i~~~~~~~~~~~Gr---~~~~i~AA~iY~acr~~~~p~t~~eIa~~~~i~-~~~i~k~~k~i~~~L~   91 (95)
T d1vola1          19 PRNKVDRTNNLFRQAYEQKSLKGR---ANDAIASACLYIACRQEGVPRTFKEICAVSRIS-KKEIGRCFKLILKALE   91 (95)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCCTTS---CHHHHHHHHHHHHHHHTTCCCCHHHHHTTTCSC-HHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHhhhhcCC---ChHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCC-HHHHHHHHHHHHHHHC
Confidence            345567788999998763111222   5766554433322  233668999999998876 4578888988887763


No 28 
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.14  E-value=18  Score=18.00  Aligned_cols=17  Identities=18%  Similarity=0.210  Sum_probs=12.1

Q ss_pred             HcCCCCchHHHHHHhcC
Q 032061           46 SAGSKGPTLDQLLSFLK   62 (148)
Q Consensus        46 ~~ga~g~T~~el~~~L~   62 (148)
                      +.=.+|+|.+||++.+.
T Consensus        39 A~~ikgKt~eeiR~~fn   55 (55)
T d1fs1b1          39 ANMIKGKTPEEIRKTFN   55 (55)
T ss_dssp             HHHHTTCCHHHHHHHTC
T ss_pred             HHHHcCCCHHHHHHHhC
Confidence            33456899999988763


No 29 
>d2jdia1 a.69.1.1 (A:380-510) F1 ATP synthase alpha subunit, domain 3 {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.76  E-value=9.5  Score=22.73  Aligned_cols=19  Identities=37%  Similarity=0.552  Sum_probs=16.8

Q ss_pred             ccccHHHHHHHHHcCCCCc
Q 032061           34 SPSSIHVLLSLISAGSKGP   52 (148)
Q Consensus        34 SP~si~~~L~~l~~ga~g~   52 (148)
                      ||+++.--.++++.|.+|-
T Consensus        55 ~Pl~v~eQv~iL~A~~~G~   73 (131)
T d2jdia1          55 SPMAIEEQVAVIYAGVRGY   73 (131)
T ss_dssp             CCCCHHHHHHHHHHHHTTT
T ss_pred             cchhHHHHHHHHHHHhcCC
Confidence            8999999999999877663


No 30 
>d1kbha_ a.153.1.1 (A:) Nuclear receptor coactivator ACTR {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.25  E-value=18  Score=17.31  Aligned_cols=23  Identities=13%  Similarity=0.167  Sum_probs=16.2

Q ss_pred             HHHHHcCCCCchHHHHHHhcCCC
Q 032061           42 LSLISAGSKGPTLDQLLSFLKSK   64 (148)
Q Consensus        42 L~~l~~ga~g~T~~el~~~L~~~   64 (148)
                      |.++..+......+||.++||.+
T Consensus        13 L~s~L~~~D~~~LeEiDrALGIp   35 (47)
T d1kbha_          13 LHTLLSNTDATGLEEIDRALGIP   35 (47)
T ss_dssp             HHHHTTSSCCTTHHHHHHHTTHH
T ss_pred             HHHHHhcCchHHHHHHHHHhCcH
Confidence            44445566677788888888865


No 31 
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.32  E-value=70  Score=17.66  Aligned_cols=69  Identities=9%  Similarity=0.051  Sum_probs=45.0

Q ss_pred             hhhHHHHHHHHHHHHhccCCCCcEEEccccHHHHHHHHHc--CCCCchHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 032061            8 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISA--GSKGPTLDQLLSFLKSKSDDQLNTFASELVAVV   80 (148)
Q Consensus         8 ~~~~~F~~~L~~~l~~~~~~~~N~v~SP~si~~~L~~l~~--ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~~l   80 (148)
                      ....+-+..+|+.+....--.+.   ||.++..+.-.+..  --...|..||.++.+.+ ..++...|+.|...+
T Consensus        19 ~~i~~~A~~i~~~~~~~~~~~Gr---~p~~iaAa~iY~a~r~~~~~~t~~eIa~~~~vs-~~tI~k~yk~l~~~~   89 (109)
T d1vola2          19 KQVQMAATHIARKAVELDLVPGR---SPISVAAAAIYMASQASAEKRTQKEIGDIAGVA-DVTIRQSYRLIYPRA   89 (109)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSTTC---CHHHHHHHHHHHHHHTSSSCCCHHHHHHHHTCC-HHHHHHHHHHHGGGH
T ss_pred             HHHHHHHHHHHHHHHHcCCcCCC---CHHHHHHHHHHHHHHHcCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHH
Confidence            34566788899998753222233   68777765444432  22467899999999876 456778887775543


Done!