Query 032063
Match_columns 148
No_of_seqs 134 out of 1099
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 14:37:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 1.4E-54 4.8E-59 309.2 19.0 148 1-148 4-151 (151)
2 2c2v_B Ubiquitin-conjugating e 100.0 1E-53 3.6E-58 305.6 17.0 147 2-148 6-152 (154)
3 2r0j_A Ubiquitin carrier prote 100.0 1.8E-53 6.1E-58 302.9 17.3 147 2-148 2-148 (149)
4 1z2u_A Ubiquitin-conjugating e 100.0 2.4E-53 8.2E-58 302.5 17.8 147 1-147 4-150 (150)
5 1fxt_A Ubiquitin-conjugating e 100.0 9.9E-54 3.4E-58 304.2 15.7 147 1-147 1-149 (149)
6 2ayv_A Ubiquitin-conjugating e 100.0 5.9E-53 2E-57 304.8 19.5 146 1-146 21-166 (166)
7 2c4o_A Ubiquitin-conjugating e 100.0 5.8E-53 2E-57 304.6 18.8 147 1-147 19-165 (165)
8 1zdn_A Ubiquitin-conjugating e 100.0 8.3E-53 2.8E-57 302.0 17.5 145 2-146 14-158 (158)
9 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.5E-52 5.1E-57 303.5 18.4 146 2-147 5-150 (169)
10 1jat_A Ubiquitin-conjugating e 100.0 4.6E-53 1.6E-57 302.5 15.3 148 1-148 5-152 (155)
11 2aak_A UBC1, ubiquitin conjuga 100.0 2.4E-52 8.2E-57 297.9 18.8 146 2-147 5-150 (152)
12 1yh2_A HSPC150 protein similar 100.0 4.5E-52 1.5E-56 301.1 19.7 147 2-148 5-155 (169)
13 3h8k_A Ubiquitin-conjugating e 100.0 5.4E-52 1.9E-56 299.5 19.8 147 2-148 4-164 (164)
14 2bep_A Ubiquitin-conjugating e 100.0 5.4E-52 1.9E-56 298.1 18.9 147 2-148 9-159 (159)
15 3rcz_B SUMO-conjugating enzyme 100.0 6.5E-52 2.2E-56 298.5 18.0 146 2-147 11-163 (163)
16 2e2c_A Ubiquitin conjugating e 100.0 9.2E-52 3.1E-56 296.1 18.6 146 1-147 9-154 (156)
17 3bzh_A Ubiquitin-conjugating e 100.0 2.2E-51 7.7E-56 302.9 19.5 146 2-147 49-194 (194)
18 2pwq_A Ubiquitin conjugating e 100.0 1.2E-51 4E-56 308.6 17.9 147 2-148 24-171 (216)
19 2ucz_A UBC7, ubiquitin conjuga 100.0 2E-51 7E-56 296.7 18.5 146 2-147 5-164 (165)
20 3k9o_A Ubiquitin-conjugating e 100.0 2.1E-51 7.1E-56 305.0 19.1 148 1-148 5-156 (201)
21 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.6E-51 5.3E-56 303.4 18.2 147 1-147 32-192 (193)
22 2gjd_A Ubiquitin-conjugating e 100.0 1.3E-51 4.6E-56 295.5 17.4 146 2-147 5-157 (157)
23 1wzv_A Ubiquitin-conjugating e 100.0 3.4E-51 1.2E-55 292.9 17.1 147 1-148 4-152 (155)
24 2grr_A Ubiquitin-conjugating e 100.0 4.1E-51 1.4E-55 294.0 17.3 147 2-148 8-161 (161)
25 1i7k_A Ubiquitin-conjugating e 100.0 4E-51 1.4E-55 298.1 16.4 147 1-148 30-176 (179)
26 1tte_A Ubiquitin-conjugating e 100.0 4.9E-51 1.7E-55 305.0 13.9 148 1-148 2-151 (215)
27 3fn1_B NEDD8-conjugating enzym 100.0 6.4E-50 2.2E-54 289.4 18.2 145 2-147 15-167 (167)
28 3e46_A Ubiquitin-conjugating e 100.0 6.2E-50 2.1E-54 305.2 19.0 147 2-148 58-208 (253)
29 3rz3_A Ubiquitin-conjugating e 100.0 2.5E-49 8.6E-54 289.9 17.8 146 2-147 8-173 (183)
30 2onu_A Ubiquitin-conjugating e 100.0 2.8E-50 9.5E-55 287.2 12.4 144 2-148 3-148 (152)
31 1yrv_A Ubiquitin-conjugating l 100.0 1.7E-49 5.8E-54 287.3 15.9 142 2-144 24-168 (169)
32 1c4z_D UBCH7, ubiquitin conjug 100.0 3.5E-50 1.2E-54 287.3 11.1 147 1-148 2-150 (154)
33 2awf_A Ubiquitin-conjugating e 100.0 2.7E-49 9.2E-54 287.2 15.0 141 1-141 17-172 (172)
34 2z5d_A Ubiquitin-conjugating e 100.0 2.6E-49 8.9E-54 288.3 14.1 142 2-147 26-169 (179)
35 1y8x_A Ubiquitin-conjugating e 100.0 2.9E-48 9.9E-53 278.8 17.1 140 2-144 7-147 (160)
36 2y9m_A Ubiquitin-conjugating e 100.0 4.1E-48 1.4E-52 281.0 18.0 146 2-147 7-168 (172)
37 4ddg_A Ubiquitin-conjugating e 100.0 2.4E-48 8.2E-53 314.0 18.0 148 1-148 3-150 (399)
38 2nvu_C NEDD8-conjugating enzym 100.0 1.1E-47 3.6E-52 280.5 16.7 140 2-144 27-167 (180)
39 1yf9_A Ubiquitin carrier prote 100.0 8E-48 2.7E-52 279.0 14.9 142 2-147 13-156 (171)
40 3o2u_A NEDD8-conjugating enzym 100.0 6.7E-47 2.3E-51 278.3 15.4 141 2-145 30-177 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 2.6E-45 8.9E-50 265.2 13.5 138 2-139 9-163 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 2.8E-43 9.7E-48 275.6 15.3 146 2-147 77-243 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 1.5E-43 5E-48 253.2 11.3 128 2-130 22-156 (156)
44 2fo3_A Ubiquitin-conjugating e 100.0 9.4E-43 3.2E-47 240.9 13.7 115 2-116 7-122 (125)
45 2h2y_A Ubiquitin-conjugating e 100.0 7.1E-42 2.4E-46 239.6 15.1 114 2-115 21-135 (136)
46 2a4d_A Ubiquitin-conjugating e 100.0 6.7E-42 2.3E-46 245.2 13.7 123 2-124 26-156 (160)
47 1jat_B Ubiquitin-conjugating e 100.0 1.1E-42 3.8E-47 244.3 7.8 125 2-127 7-138 (138)
48 2hlw_A Ubiquitin-conjugating e 100.0 2.7E-41 9.3E-46 244.4 10.1 123 2-124 36-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 2.6E-40 8.8E-45 231.5 13.3 109 3-111 24-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 6.6E-39 2.2E-43 235.2 15.6 116 1-118 14-132 (187)
51 1zuo_A Hypothetical protein LO 100.0 4.1E-40 1.4E-44 241.4 3.6 137 2-146 28-181 (186)
52 2z6o_A UFM1-conjugating enzyme 100.0 2.9E-29 9.9E-34 178.1 4.0 96 3-104 34-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 5.2E-21 1.8E-25 136.6 9.8 113 4-117 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 8.3E-21 2.8E-25 132.0 1.6 95 3-103 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 2.9E-15 9.9E-20 105.2 7.2 101 6-112 25-138 (146)
56 2ebm_A RWD domain-containing p 97.3 0.0056 1.9E-07 41.1 10.9 66 4-71 13-78 (128)
57 2day_A Ring finger protein 25; 96.4 0.027 9.4E-07 37.6 8.7 68 5-72 12-83 (128)
58 2yz0_A Serine/threonine-protei 96.2 0.048 1.6E-06 36.9 9.2 66 5-71 14-85 (138)
59 3zqs_A E3 ubiquitin-protein li 96.2 0.056 1.9E-06 38.9 9.8 84 5-112 5-88 (186)
60 2ebk_A RWD domain-containing p 95.7 0.13 4.4E-06 34.3 9.4 65 5-70 11-78 (128)
61 2daw_A RWD domain containing p 94.7 0.19 6.6E-06 34.7 8.0 23 49-71 76-98 (154)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 94.5 0.66 2.2E-05 31.0 10.5 67 4-71 13-86 (137)
63 2dax_A Protein C21ORF6; RWD do 91.0 0.19 6.4E-06 34.6 3.4 25 48-72 73-97 (152)
64 2cwb_A Chimera of immunoglobul 85.4 0.16 5.5E-06 33.3 0.0 34 114-147 22-55 (108)
65 3u3c_B Paxillin LD2 peptide; 4 79.9 1.4 4.7E-05 20.5 2.0 19 3-21 7-25 (26)
66 1zoq_C CREB-binding protein, i 51.1 9.8 0.00033 20.6 1.9 44 103-147 3-46 (47)
67 3s7v_A Major capsid protein VP 35.0 81 0.0028 23.6 5.4 44 40-86 194-239 (277)
68 2bum_A Protocatechuate 3,4-dio 34.5 35 0.0012 24.5 3.4 26 45-70 108-138 (209)
69 1kbh_B CREB-binding protein, n 34.3 65 0.0022 18.2 5.6 45 102-147 9-53 (59)
70 3nxg_A Major capsid protein VP 30.4 91 0.0031 23.3 5.0 44 40-86 185-230 (272)
71 1sid_A Polyomavirus coat prote 30.0 96 0.0033 24.2 5.2 24 63-86 249-274 (383)
72 1sva_1 Simian virus 40; virus 28.7 89 0.003 24.3 4.8 39 45-86 215-255 (361)
73 1vps_A Polyomavirus VP1 pentam 28.5 1.3E+02 0.0044 22.6 5.5 43 41-86 199-243 (289)
74 4fmh_A VP1; viral capsid prote 27.7 1.2E+02 0.004 22.9 5.2 44 40-86 202-247 (289)
75 1h3o_B Transcription initiatio 27.3 73 0.0025 19.1 3.4 42 106-147 11-52 (76)
76 2cu9_A Spcia1, histone chapero 25.9 1.3E+02 0.0043 20.8 4.8 38 29-66 36-86 (161)
77 2f4m_B UV excision repair prot 24.0 77 0.0026 18.1 2.9 20 119-138 37-56 (61)
78 3g9r_A Fusion complex of HIV-1 23.4 53 0.0018 17.1 1.9 12 3-14 30-41 (42)
79 1pve_A HHR23B, UV excision rep 22.6 76 0.0026 18.8 2.8 21 119-139 39-59 (72)
80 3kxt_A Chromatin protein CREN7 21.6 54 0.0018 18.4 1.8 11 52-62 46-56 (56)
81 2ccv_A Helix pomatia agglutini 21.5 1.4E+02 0.0048 18.6 4.1 25 46-71 27-51 (101)
82 3pft_A Flavin reductase; desul 21.2 41 0.0014 22.6 1.6 67 8-91 5-74 (157)
83 1roc_A Anti-silencing protein 20.8 1.8E+02 0.0061 19.9 4.7 35 29-63 37-84 (155)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.4e-54 Score=309.19 Aligned_cols=148 Identities=66% Similarity=1.219 Sum_probs=145.7
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||++
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 83 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK 83 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999986
No 2
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1e-53 Score=305.55 Aligned_cols=147 Identities=46% Similarity=0.859 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 6 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 85 (154)
T 2c2v_B 6 LPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 85 (154)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 82 GNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 86 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp CBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999975
No 3
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.8e-53 Score=302.89 Aligned_cols=147 Identities=48% Similarity=0.891 Sum_probs=144.3
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
+.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 82 GNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999985
No 4
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.4e-53 Score=302.53 Aligned_cols=147 Identities=77% Similarity=1.358 Sum_probs=144.4
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996
No 5
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=9.9e-54 Score=304.21 Aligned_cols=147 Identities=46% Similarity=0.884 Sum_probs=144.2
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCC-CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccccc
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAE-DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
||.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 1 ~~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 1 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CCHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred ChHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 6889999999999999999999999887 999999999999999999999999999999999999999999999999999
Q ss_pred C-CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 80 S-NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 80 ~-~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
. +|.||+++|.++|+|++|+.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 8 9999999999999999999999999999999999999999999999999999999999999999996
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5.9e-53 Score=304.80 Aligned_cols=146 Identities=76% Similarity=1.342 Sum_probs=143.7
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYA 146 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
+|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999997
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=5.8e-53 Score=304.63 Aligned_cols=147 Identities=80% Similarity=1.376 Sum_probs=144.3
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996
No 8
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.3e-53 Score=302.02 Aligned_cols=145 Identities=39% Similarity=0.700 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 032063 82 GNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYA 146 (148)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 94 G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999998
No 9
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-52 Score=303.47 Aligned_cols=146 Identities=38% Similarity=0.817 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+..+|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~ 84 (169)
T 1ayz_A 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYAN 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 82 GNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++++++|.++||+|+++||+
T Consensus 85 G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 85 GEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp SBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999986
No 10
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=4.6e-53 Score=302.52 Aligned_cols=148 Identities=45% Similarity=0.816 Sum_probs=144.6
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999974
No 11
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.4e-52 Score=297.94 Aligned_cols=146 Identities=42% Similarity=0.869 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (152)
T 2aak_A 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 82 GNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 150 (152)
T 2aak_A 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150 (152)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999996
No 12
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-52 Score=301.12 Aligned_cols=147 Identities=41% Similarity=0.792 Sum_probs=144.1
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~ 84 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSA 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cceeccccc----ccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 82 GNICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 82 G~vcl~~l~----~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|. ++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 85 GRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp CBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 999999998 8999999999999999999999999999999999999999999999999999999974
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=5.4e-52 Score=299.45 Aligned_cols=147 Identities=38% Similarity=0.782 Sum_probs=143.2
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCC-CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAE-DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~ 83 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYP 83 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCC
Confidence 789999999999999999999998876 9999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccccc-------------ccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 81 NGNICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 81 ~G~vcl~~l~-------------~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|. ++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|+++++.
T Consensus 84 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 84 DGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred CCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 9999999996 789999999999999999999999999999999999999999999999999999986
Q ss_pred C
Q 032063 148 G 148 (148)
Q Consensus 148 ~ 148 (148)
+
T Consensus 164 ~ 164 (164)
T 3h8k_A 164 L 164 (164)
T ss_dssp C
T ss_pred C
Confidence 4
No 14
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=5.4e-52 Score=298.09 Aligned_cols=147 Identities=41% Similarity=0.787 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHhhhC---CCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccc
Q 032063 2 ASKRILKELRDLQRD---PPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNI 78 (148)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv 78 (148)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 9 a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 88 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 88 (159)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCC
Confidence 679999999999985 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 79 NS-NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 79 ~~-~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+. +|.||+++|.++|+|++|+.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+|
T Consensus 89 ~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 89 SSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp CTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 95 99999999999999999999999999999999999999999999999999999999999999999986
No 15
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=6.5e-52 Score=298.54 Aligned_cols=146 Identities=38% Similarity=0.749 Sum_probs=141.8
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCC-----CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccc
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAE-----DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHP 76 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hp 76 (148)
|++||++|+++|+++++.|+++.|.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999999999999999999876 999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceecccccc--cCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 77 NINSNGNICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 77 nv~~~G~vcl~~l~~--~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
||+.+|.||+++|.. +|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||-
T Consensus 91 nV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 91 NVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999999999999975 49999999999999999999999999999999999999999999999999999983
No 16
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=9.2e-52 Score=296.07 Aligned_cols=146 Identities=39% Similarity=0.728 Sum_probs=142.6
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
.|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 9 ~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 88 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ 88 (156)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|.++||+|+++||.
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 89 SGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred CceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999 8999999999999999984
No 17
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=2.2e-51 Score=302.87 Aligned_cols=146 Identities=60% Similarity=1.097 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||||+.+
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 128 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ 128 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 82 GNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 82 G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++|++|+++||+
T Consensus 129 G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 129 GVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999996
No 18
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.2e-51 Score=308.63 Aligned_cols=147 Identities=45% Similarity=0.881 Sum_probs=144.0
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccccc-C
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN-S 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~-~ 80 (148)
|.+||++|+++|+++++.|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+ .
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++||.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999974
No 19
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2e-51 Score=296.71 Aligned_cols=146 Identities=39% Similarity=0.806 Sum_probs=142.0
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecC-CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVA-EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.+||++|+++|+++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||++
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 84 (165)
T 2ucz_A 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP 84 (165)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC
Confidence 68999999999999999999999876 69999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccc-------------cccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 81 NGNICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 81 ~G~vcl~~l-------------~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++| .++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 85 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 85 NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 999999999 6899999999999999999999999999999999999999999999999999999874
No 20
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=2.1e-51 Score=305.03 Aligned_cols=148 Identities=41% Similarity=0.787 Sum_probs=143.4
Q ss_pred ChHHHHHHHHHHhhhC---CCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 032063 1 MASKRILKELRDLQRD---PPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+|.+||++|+++|+++ ++.|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 84 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 84 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCC
Confidence 4789999999999987 3789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 78 INS-NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 78 v~~-~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|++ +|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 v~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 85 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 995 99999999999999999999999999999999999999999999999999999999999999999985
No 21
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-51 Score=303.39 Aligned_cols=147 Identities=46% Similarity=0.859 Sum_probs=140.7
Q ss_pred ChHHHHHHHHHHhhhCCC-------------CCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCee
Q 032063 1 MASKRILKELRDLQRDPP-------------TSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKV 67 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~-------------~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v 67 (148)
+|.+||++|+++|+++++ .|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 478999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred eEeccccccccc-CCCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 032063 68 AFKTKVFHPNIN-SNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYA 146 (148)
Q Consensus 68 ~f~~~i~Hpnv~-~~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
+|.|+||||||+ .+|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 999999999999 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 032063 147 M 147 (148)
Q Consensus 147 ~ 147 (148)
+
T Consensus 192 ~ 192 (193)
T 2f4z_A 192 K 192 (193)
T ss_dssp C
T ss_pred c
Confidence 7
No 22
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.3e-51 Score=295.46 Aligned_cols=146 Identities=34% Similarity=0.723 Sum_probs=141.7
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecC-----CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccc
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVA-----EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHP 76 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hp 76 (148)
|.+||++|+++|+++++.|+++.|.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 5 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHP 84 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccC
Confidence 68999999999999999999999875 4899999999999999999999999999999999999999999999999
Q ss_pred cccCCCceecccccc--cCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 77 NINSNGNICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 77 nv~~~G~vcl~~l~~--~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 85 NVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999976 79999999999999999999999999999999999999999999999999999996
No 23
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=3.4e-51 Score=292.86 Aligned_cols=147 Identities=36% Similarity=0.784 Sum_probs=142.5
Q ss_pred ChHHHHHHHHHHhhhCCCCCeee-eecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccccc
Q 032063 1 MASKRILKELRDLQRDPPTSCSA-GPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~-~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
+|.+||++|+++|+++++.|+.+ .+.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 37899999999999999999999 788899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCceecccc-cccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 80 SNGNICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 80 ~~G~vcl~~l-~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
.+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999 89999999999999999999999999999999999999999999999999999999973
No 24
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=4.1e-51 Score=294.02 Aligned_cols=147 Identities=35% Similarity=0.725 Sum_probs=141.5
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecC-----CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccc
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVA-----EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHP 76 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hp 76 (148)
|.+||++|+++|+++++.|+.+.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 87 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHP 87 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccC
Confidence 67999999999999999999998864 6899999999999999999999999999999999999999999999999
Q ss_pred cccCCCceecccccc--cCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 77 NINSNGNICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 77 nv~~~G~vcl~~l~~--~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 88 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 88 NVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred CCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 999999999999975 899999999999999999999999999999999999999999999999999999985
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4e-51 Score=298.15 Aligned_cols=147 Identities=35% Similarity=0.617 Sum_probs=142.9
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
.|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 30 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 109 (179)
T 1i7k_A 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT 109 (179)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|.++|++++++++++
T Consensus 110 ~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 110 QGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred CCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999 99999999999999999875
No 26
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=4.9e-51 Score=305.05 Aligned_cols=148 Identities=44% Similarity=0.866 Sum_probs=143.2
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCC-CceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccccc
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAED-MFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n-~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
+|.+||++|+++|+++++.|+++.+.++| ++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999998864 66999999999999999999999999999999999999999999999999
Q ss_pred C-CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 80 S-NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 80 ~-~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+ +|.||+++|.++|+|++||.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 8 99999999999999999999999999999999999999999999999999999999999999999974
No 27
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=6.4e-50 Score=289.37 Aligned_cols=145 Identities=34% Similarity=0.650 Sum_probs=139.3
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeec-CCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPV-AEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~-~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+.+||++|+++|+++++.|+++.+. ++|+..|.++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 93 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE 93 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC
Confidence 6799999999999999999999865 57899999999 899999999999999999999999999999999999999999
Q ss_pred CCceecccccc------cCCCccCHHHHHHHHHHhhcC-CCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 81 NGNICLDILKE------QWSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 81 ~G~vcl~~l~~------~W~p~~~~~~il~~l~~ll~~-p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.. +|+|++||.+||.+|+++|.+ |++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 94 ~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 94 TGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp TCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999975 799999999999999999999 69999999999999999999999999999999996
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=6.2e-50 Score=305.21 Aligned_cols=147 Identities=41% Similarity=0.787 Sum_probs=143.0
Q ss_pred hHHHHHHHHHHhhhC---CCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccc
Q 032063 2 ASKRILKELRDLQRD---PPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNI 78 (148)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv 78 (148)
|.+||++|+++|+++ ++.|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 58 a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 137 (253)
T 3e46_A 58 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 137 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCc
Confidence 689999999999987 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 79 NS-NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 79 ~~-~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+. +|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 138 ~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 138 SSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp CTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 95 99999999999999999999999999999999999999999999999999999999999999999985
No 29
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.5e-49 Score=289.93 Aligned_cols=146 Identities=34% Similarity=0.711 Sum_probs=139.8
Q ss_pred hHHHHHHHHHHhhhCCCCCeeee-ecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAG-PVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.|||++|+++|+++++.|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||++
T Consensus 8 a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 87 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE 87 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC
Confidence 67999999999999999999999 66789999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccccc-------------ccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHh------CHHHHHHHHHHH
Q 032063 81 NGNICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKT------DKTKYESSARSW 141 (148)
Q Consensus 81 ~G~vcl~~l~-------------~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~------~~~~f~~~~~~~ 141 (148)
+|.||+++|. ++|+|++||.+||.+|++||.+|++++|+|.+|+++|++ ++++|+++++++
T Consensus 88 ~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~ 167 (183)
T 3rz3_A 88 TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQ 167 (183)
T ss_dssp TSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHHH
Confidence 9999999996 889999999999999999999999999999999999998 789999999999
Q ss_pred HHHhhC
Q 032063 142 TQKYAM 147 (148)
Q Consensus 142 ~~~~a~ 147 (148)
+++++.
T Consensus 168 v~~s~~ 173 (183)
T 3rz3_A 168 VLGTKV 173 (183)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998763
No 30
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2.8e-50 Score=287.17 Aligned_cols=144 Identities=30% Similarity=0.641 Sum_probs=138.3
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC-
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS- 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~- 80 (148)
|.+||++|++++++. |+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~ 79 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEA 79 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCc
Confidence 679999999999874 7888899999999999999999999999999999999999999999999999999999995
Q ss_pred CCceecccccccCCCccCHHHHHHH-HHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~-l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 80 ~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 80 SGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred CCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999 6899999999999999999999999999999999999999974
No 31
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-49 Score=287.34 Aligned_cols=142 Identities=33% Similarity=0.637 Sum_probs=137.3
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccc-cC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNI-NS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv-~~ 80 (148)
|.+||++|+++|+++++.|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||| +.
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~ 103 (169)
T 1yrv_A 24 AYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPH 103 (169)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred CCceeccccc--ccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 032063 81 NGNICLDILK--EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQK 144 (148)
Q Consensus 81 ~G~vcl~~l~--~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~ 144 (148)
+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++ ++++++
T Consensus 104 ~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 104 TGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp TCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9999999998 89999999999999999999999999999999999999999999999 888764
No 32
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=3.5e-50 Score=287.30 Aligned_cols=147 Identities=37% Similarity=0.819 Sum_probs=137.2
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeee-cCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccccc
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGP-VAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~-~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
+|.+||++|+++|+++++.|+.+.+ .++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 4679999999999999999998654 5689999999998 9999999999999999999999999999999999999999
Q ss_pred CCCceeccccc-ccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 80 SNGNICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 80 ~~G~vcl~~l~-~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
.+|.||+++|. ++|+|++|+.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 99999999996 8999999999999999999999999999999999999999999999999999999974
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2.7e-49 Score=287.18 Aligned_cols=141 Identities=36% Similarity=0.819 Sum_probs=109.1
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecC-CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccccc
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVA-EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
.|.+||++|+++|+++++.|+++.+.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 17 ~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~ 96 (172)
T 2awf_A 17 RGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVD 96 (172)
T ss_dssp TTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCC
Confidence 378999999999999999999999876 6999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeccccc-------------ccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHH-HHHHHHHHH
Q 032063 80 SNGNICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKT-KYESSARSW 141 (148)
Q Consensus 80 ~~G~vcl~~l~-------------~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~-~f~~~~~~~ 141 (148)
++|.||+++|. ++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|++ +|+++||+|
T Consensus 97 ~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 97 KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp TTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 99999999996 689999999999999999999999999999999999999999 999999975
No 34
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-49 Score=288.34 Aligned_cols=142 Identities=31% Similarity=0.687 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC-
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS- 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~- 80 (148)
|.+||++|+++|++ .|+++.+. +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 26 a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~ 101 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEA 101 (179)
T ss_dssp HHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCC
Confidence 57999999999985 47888877 67899999999999999999999999999999999999999999999999998
Q ss_pred CCceecccccccCCCccCHHHHHHH-HHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~-l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|+++|.+||.+ |+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 102 ~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 102 SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp TCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999 999999999999999999999999999999999999999997
No 35
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-48 Score=278.84 Aligned_cols=140 Identities=34% Similarity=0.738 Sum_probs=135.0
Q ss_pred hHHHHHHHHHHhhhCCCCCeeee-ecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAG-PVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.+||++|+++| +++.|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 7 ~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (160)
T 1y8x_A 7 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 83 (160)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC
Confidence 789999999999 467899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQK 144 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~ 144 (148)
+|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||++++.
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 84 EGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999874
No 36
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=4.1e-48 Score=281.01 Aligned_cols=146 Identities=32% Similarity=0.661 Sum_probs=137.1
Q ss_pred hHHHHHHHHHHhhh-C-C------CC---Ceeeee-cCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeE
Q 032063 2 ASKRILKELRDLQR-D-P------PT---SCSAGP-VAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAF 69 (148)
Q Consensus 2 a~~RL~~E~~~l~~-~-~------~~---~~~~~~-~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f 69 (148)
|.+||++|+++|++ + + +. ++.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 67999999999998 5 3 33 456777 67899999999999999999999999999999999999999999
Q ss_pred ec-cccccccc-CCCceeccccc-ccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHh-CHHHHHHHHHHHHHHh
Q 032063 70 KT-KVFHPNIN-SNGNICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKT-DKTKYESSARSWTQKY 145 (148)
Q Consensus 70 ~~-~i~Hpnv~-~~G~vcl~~l~-~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~-~~~~f~~~~~~~~~~~ 145 (148)
.| ++|||||+ .+|.||+++|. ++|+|++||.+||.+|+++|.+|++++|+|.+||++|++ |+++|.++||+|++++
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~ 166 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAER 166 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99 99999996 79999999998 899999999999999999999999999999999999999 9999999999999998
Q ss_pred hC
Q 032063 146 AM 147 (148)
Q Consensus 146 a~ 147 (148)
+.
T Consensus 167 ~~ 168 (172)
T 2y9m_A 167 ER 168 (172)
T ss_dssp HC
T ss_pred Hh
Confidence 74
No 37
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2.4e-48 Score=314.05 Aligned_cols=148 Identities=79% Similarity=1.356 Sum_probs=145.5
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|+|||++|+++|+++++.|+++.|.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||++
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhCC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++|+.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999974
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-47 Score=280.46 Aligned_cols=140 Identities=34% Similarity=0.712 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHhhhCCCCCeeee-ecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAG-PVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.+||++|+++| ++++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 27 ~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~ 103 (180)
T 2nvu_C 27 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 103 (180)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC
Confidence 679999999999 577899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQK 144 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~ 144 (148)
+|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|++|++.
T Consensus 104 ~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 104 EGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp TSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999874
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=8e-48 Score=279.04 Aligned_cols=142 Identities=26% Similarity=0.634 Sum_probs=134.9
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC-
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS- 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~- 80 (148)
|.+||++|+++|++++. ++ +.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 13 ~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~ 88 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDER 88 (171)
T ss_dssp CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCccc
Confidence 46999999999999874 33 35789999999999999999999999999999999999999999999999999995
Q ss_pred CCceecccccccCCCccCHHHHHHHH-HHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSI-CSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l-~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|+++|.+||.+| ++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 89 SGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999997 79999999999999999999999999999999999999997
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=6.7e-47 Score=278.34 Aligned_cols=141 Identities=31% Similarity=0.623 Sum_probs=135.6
Q ss_pred hHHHHHHHHHHhhhCCCCCeeee----ecCCCCc---eEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccc
Q 032063 2 ASKRILKELRDLQRDPPTSCSAG----PVAEDMF---HWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVF 74 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~----~~~~n~~---~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~ 74 (148)
|.+||++|+++|+ +++|+++. +.++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 30 a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 30 ARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp HHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 6899999999999 67899998 7889999 9999997 88899999999999999999999999999999999
Q ss_pred cccccCCCceecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHh
Q 032063 75 HPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKY 145 (148)
Q Consensus 75 Hpnv~~~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~ 145 (148)
||||+.+|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++..
T Consensus 107 HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 107 HPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp CTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred cCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998654
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=2.6e-45 Score=265.19 Aligned_cols=138 Identities=27% Similarity=0.593 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHhhhCC------------CCCeeeeecCCCCceEEEEEeCCCCCCCC--CcEEEEEEEcCCCCCCCCCee
Q 032063 2 ASKRILKELRDLQRDP------------PTSCSAGPVAEDMFHWQATIIGPNDSPYA--GGVFVVTIHFPPDYPFKPPKV 67 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~------------~~~~~~~~~~~n~~~w~~~i~gp~~tpy~--g~~f~~~i~fp~~yP~~pP~v 67 (148)
|.|||++|+++|++++ +.++.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||++||+|
T Consensus 9 a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v 88 (167)
T 4ds2_A 9 SNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTV 88 (167)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEE
Confidence 6799999999999976 77899999999999999999999999999 999999999999999999999
Q ss_pred eEecccccccccCCCceecccccccCCCccCHHHHH-HHHHHhhcC--CCCCCCccHHHHHHHHhCHHHHHHHHH
Q 032063 68 AFKTKVFHPNINSNGNICLDILKEQWSPALTISKVL-LSICSLLTD--PNPDDPLVPEIAHMCKTDKTKYESSAR 139 (148)
Q Consensus 68 ~f~~~i~Hpnv~~~G~vcl~~l~~~W~p~~~~~~il-~~l~~ll~~--p~~~~~~n~~a~~~~~~~~~~f~~~~~ 139 (148)
+|.|++|||||+.+|.||+++|.++|+|++++.++| ..|++++.. |++++|+|.|||++|++|+++|+++||
T Consensus 89 ~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 89 RFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp EESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred EEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 999999999999999999999999999999999975 467777764 899999999999999999999999998
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=275.57 Aligned_cols=146 Identities=33% Similarity=0.594 Sum_probs=136.2
Q ss_pred hHHHHHHHHHHhhhCCCCC----eeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecc-----
Q 032063 2 ASKRILKELRDLQRDPPTS----CSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTK----- 72 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~----~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~----- 72 (148)
+.+||++|+++|+++++.| +.+.+.++|+..|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 6799999999999987764 4566788999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCceeccccc-------ccCCCcc-CHHHHHHHHHHhhc--CCCCCCCccHHH--HHHHHhCHHHHHHHHHH
Q 032063 73 VFHPNINSNGNICLDILK-------EQWSPAL-TISKVLLSICSLLT--DPNPDDPLVPEI--AHMCKTDKTKYESSARS 140 (148)
Q Consensus 73 i~Hpnv~~~G~vcl~~l~-------~~W~p~~-~~~~il~~l~~ll~--~p~~~~~~n~~a--~~~~~~~~~~f~~~~~~ 140 (148)
+|||||+.+|.||+++|. ++|+|++ ||.+||.+|++||. +|++++|+|.++ +.++.+|+++|.++|+.
T Consensus 157 ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~ 236 (323)
T 3ceg_A 157 RFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQ 236 (323)
T ss_dssp CCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHH
Confidence 999999999999999996 7999999 89999999999996 677799999987 57899999999999999
Q ss_pred HHHHhhC
Q 032063 141 WTQKYAM 147 (148)
Q Consensus 141 ~~~~~a~ 147 (148)
|+++|||
T Consensus 237 ~t~k~A~ 243 (323)
T 3ceg_A 237 ATVKWAM 243 (323)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9999997
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.5e-43 Score=253.16 Aligned_cols=128 Identities=26% Similarity=0.463 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHhhhC-CCCCeeeeecC-C--CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 032063 2 ASKRILKELRDLQRD-PPTSCSAGPVA-E--DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (148)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~~~~~~~~-~--n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+.+||++|+++++++ ++.|+++.+.+ + |++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 22 ~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 101 (156)
T 2q0v_A 22 RSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSC 101 (156)
T ss_dssp HHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCC
Confidence 679999999999998 78899998854 3 5999999999999999999999999999999999999999999999999
Q ss_pred ccCCCce---ecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhC
Q 032063 78 INSNGNI---CLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTD 130 (148)
Q Consensus 78 v~~~G~v---cl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~ 130 (148)
|+.+|.| |+++|. +|+|+++|.+||.+|+++|.+|++++++|.+||++|++|
T Consensus 102 V~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 102 VDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp BCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 9999999 888886 599999999999999999999999999999999998765
No 44
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=9.4e-43 Score=240.94 Aligned_cols=115 Identities=37% Similarity=0.722 Sum_probs=106.3
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccc-ccccccC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKV-FHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i-~Hpnv~~ 80 (148)
|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 7 a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 86 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS 86 (125)
T ss_dssp --CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCCC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPD 116 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~ 116 (148)
+|.||+++|.++|+|++|+.+||.+|+++|.+|+..
T Consensus 87 ~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 87 NGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999764
No 45
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.1e-42 Score=239.61 Aligned_cols=114 Identities=37% Similarity=0.732 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccc-ccccccC
Q 032063 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKV-FHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i-~Hpnv~~ 80 (148)
|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 21 ~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 100 (136)
T 2h2y_A 21 ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYS 100 (136)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCceecccccccCCCccCHHHHHHHHHHhhcCCCC
Q 032063 81 NGNICLDILKEQWSPALTISKVLLSICSLLTDPNP 115 (148)
Q Consensus 81 ~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~~p~~ 115 (148)
+|.||+++|.++|+|++|+.+||.+|++||.+|+.
T Consensus 101 ~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 101 NGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 99999999999999999999999999999999864
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=6.7e-42 Score=245.21 Aligned_cols=123 Identities=31% Similarity=0.494 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHhhhCCCCC-eeeeec-CCC--CceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 032063 2 ASKRILKELRDLQRDPPTS-CSAGPV-AED--MFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-~~~~~~-~~n--~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+.+||++|+++|++++++| +.+.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 5689999999999998888 677764 444 999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCceeccccc--ccCCCccCHHHHHHHHHHhhc-CCCCCCCccHHHH
Q 032063 78 IN-SNGNICLDILK--EQWSPALTISKVLLSICSLLT-DPNPDDPLVPEIA 124 (148)
Q Consensus 78 v~-~~G~vcl~~l~--~~W~p~~~~~~il~~l~~ll~-~p~~~~~~n~~a~ 124 (148)
|+ .+|.||+++|. ++|+|++||++||.+|+++|. +||+++|+|.|||
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 99 69999999997 899999999999999999995 6999999999987
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=1.1e-42 Score=244.30 Aligned_cols=125 Identities=30% Similarity=0.581 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHhhhC-CCCCeeeeecC-C--CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 032063 2 ASKRILKELRDLQRD-PPTSCSAGPVA-E--DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (148)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~~~~~~~~-~--n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+.+||++|+++++++ ++.|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 86 (138)
T 1jat_B 7 RNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPC 86 (138)
T ss_dssp HHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCC
Confidence 568999999999998 78999998854 3 5999999999999999999999999999999999999999999999999
Q ss_pred ccCC-Cce--ecccccccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHH
Q 032063 78 INSN-GNI--CLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMC 127 (148)
Q Consensus 78 v~~~-G~v--cl~~l~~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~ 127 (148)
|+.+ |.| |++++. +|+|++|+.+||.+|+++|.+|++++++|.+|+.+|
T Consensus 87 v~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 87 VNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp BCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred EeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 9985 999 899885 899999999999999999999999999999988654
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=244.40 Aligned_cols=123 Identities=31% Similarity=0.494 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHhhhCCCCC-eeeeec-CCC--CceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 032063 2 ASKRILKELRDLQRDPPTS-CSAGPV-AED--MFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-~~~~~~-~~n--~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+.+||++|+++|+++++.| +.+.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 5799999999999998888 667763 444 999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCceeccccc--ccCCCccCHHHHHHHHHHhhc-CCCCCCCccHHHH
Q 032063 78 IN-SNGNICLDILK--EQWSPALTISKVLLSICSLLT-DPNPDDPLVPEIA 124 (148)
Q Consensus 78 v~-~~G~vcl~~l~--~~W~p~~~~~~il~~l~~ll~-~p~~~~~~n~~a~ 124 (148)
|+ .+|.||+++|. ++|+|++||.+||.+|+++|. .||+++|+|.|||
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 99 79999999997 899999999999999999997 5999999999986
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-40 Score=231.48 Aligned_cols=109 Identities=41% Similarity=0.785 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhhhCCCCCeeee--ecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccc--cccc
Q 032063 3 SKRILKELRDLQRDPPTSCSAG--PVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVF--HPNI 78 (148)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~--~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~--Hpnv 78 (148)
.+||++|+++++++++.|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+++ ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 3999999999999999999965 78899999999999999999999999999999999999999999999999 9999
Q ss_pred cCCCceecccccccCCCccCHHHHHHHHHHhhc
Q 032063 79 NSNGNICLDILKEQWSPALTISKVLLSICSLLT 111 (148)
Q Consensus 79 ~~~G~vcl~~l~~~W~p~~~~~~il~~l~~ll~ 111 (148)
+.+|+||+++|.++|+|++|+++||.+|++||.
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 999999999999999999999999999999984
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.6e-39 Score=235.22 Aligned_cols=116 Identities=28% Similarity=0.679 Sum_probs=104.8
Q ss_pred ChHHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 032063 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
.|.+||++|+++|+++++.|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ ||+|+.
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~ 91 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC 91 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc
Confidence 378999999999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred CCceecccc---cccCCCccCHHHHHHHHHHhhcCCCCCCC
Q 032063 81 NGNICLDIL---KEQWSPALTISKVLLSICSLLTDPNPDDP 118 (148)
Q Consensus 81 ~G~vcl~~l---~~~W~p~~~~~~il~~l~~ll~~p~~~~~ 118 (148)
+|.||+++| .++|+|+++|.+||.+|+++|.+|+++..
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 999999999 68999999999999999999999988644
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=4.1e-40 Score=241.36 Aligned_cols=137 Identities=24% Similarity=0.494 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHhhhCC---CCCeeeeecCCCCceEEEEEeCC-CCCCCCC-----------cEEEEEEEcCCCCCCCCCe
Q 032063 2 ASKRILKELRDLQRDP---PTSCSAGPVAEDMFHWQATIIGP-NDSPYAG-----------GVFVVTIHFPPDYPFKPPK 66 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~---~~~~~~~~~~~n~~~w~~~i~gp-~~tpy~g-----------~~f~~~i~fp~~yP~~pP~ 66 (148)
|.+||++|+++|++++ +.++++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||+
T Consensus 28 a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~ 107 (186)
T 1zuo_A 28 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPF 107 (186)
T ss_dssp HHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCe
Confidence 6799999999999987 68899999999999999999997 9999998 8999999999999999999
Q ss_pred eeEecccccc-cccCCCceeccccc-ccCCCccCHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 032063 67 VAFKTKVFHP-NINSNGNICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQK 144 (148)
Q Consensus 67 v~f~~~i~Hp-nv~~~G~vcl~~l~-~~W~p~~~~~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~ 144 (148)
|+|.+++||| ||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|+... .|..++++|.++++..+.+
T Consensus 108 V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~~~~ 179 (186)
T 1zuo_A 108 VRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQSYN 179 (186)
T ss_dssp EEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHHHHH
T ss_pred EEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHHHHH
Confidence 9999999999 69999999999996 799999999999999999999986533 2334456676666666655
Q ss_pred hh
Q 032063 145 YA 146 (148)
Q Consensus 145 ~a 146 (148)
.+
T Consensus 180 ~~ 181 (186)
T 1zuo_A 180 SI 181 (186)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=2.9e-29 Score=178.10 Aligned_cols=96 Identities=19% Similarity=0.322 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCc----------EEEEEEEcCCCCCCCCCeeeEecc
Q 032063 3 SKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGG----------VFVVTIHFPPDYPFKPPKVAFKTK 72 (148)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~----------~f~~~i~fp~~yP~~pP~v~f~~~ 72 (148)
.+||++||+.|++ ++.+.++|++.|.+.+.||++|+|+|| .|.+++.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7999999999999 477888999999999999999999999 999999999999999999999997
Q ss_pred -cccccccCCCceecccc-cc---cCCCccCHHHHHH
Q 032063 73 -VFHPNINSNGNICLDIL-KE---QWSPALTISKVLL 104 (148)
Q Consensus 73 -i~Hpnv~~~G~vcl~~l-~~---~W~p~~~~~~il~ 104 (148)
++|||||.+|+||++++ .. .|+|.++|.++|.
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 99999999999999999 43 5669999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.85 E-value=5.2e-21 Score=136.59 Aligned_cols=113 Identities=25% Similarity=0.413 Sum_probs=92.5
Q ss_pred HHHHHHHHHhhhC-CC--CCeeeeecCCCCceEEEEEeCCCCCCCCCcE---EEEEEEcCCCCCCCCCeeeEecc-----
Q 032063 4 KRILKELRDLQRD-PP--TSCSAGPVAEDMFHWQATIIGPNDSPYAGGV---FVVTIHFPPDYPFKPPKVAFKTK----- 72 (148)
Q Consensus 4 ~RL~~E~~~l~~~-~~--~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~---f~~~i~fp~~yP~~pP~v~f~~~----- 72 (148)
+|..+|..++.+. +. +...+...++...++-+.+.|.-.++|+|+. |.+.|.||++||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 5677788877653 22 2222344556677788888887779999999 88999999999999999988551
Q ss_pred -----cc-cccccCCCceecccccccCCC-ccCHHHHHHHHHHhhcCCCCCC
Q 032063 73 -----VF-HPNINSNGNICLDILKEQWSP-ALTISKVLLSICSLLTDPNPDD 117 (148)
Q Consensus 73 -----i~-Hpnv~~~G~vcl~~l~~~W~p-~~~~~~il~~l~~ll~~p~~~~ 117 (148)
++ |||||++|+||+++| ++|+| +.++.++|.+|+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 999999999999999 57999 5799999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.80 E-value=8.3e-21 Score=132.01 Aligned_cols=95 Identities=24% Similarity=0.426 Sum_probs=81.0
Q ss_pred HHHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCc----------EEEEEEEcCCCCCCCCCeeeEecc
Q 032063 3 SKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGG----------VFVVTIHFPPDYPFKPPKVAFKTK 72 (148)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~----------~f~~~i~fp~~yP~~pP~v~f~~~ 72 (148)
..||.+||..|-+ +++.++++-..|...+.|++||+|.|+ .|.+++.||.+||..||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 4799999999987 566667777889999999999999999 899999999999999999999995
Q ss_pred -cccccccCCCceeccccc-ccC---CCccCHHHHH
Q 032063 73 -VFHPNINSNGNICLDILK-EQW---SPALTISKVL 103 (148)
Q Consensus 73 -i~Hpnv~~~G~vcl~~l~-~~W---~p~~~~~~il 103 (148)
++||++|.+|+||++++. .-| .|.++|...|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 899999999999999862 222 4556676665
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.58 E-value=2.9e-15 Score=105.16 Aligned_cols=101 Identities=19% Similarity=0.393 Sum_probs=78.6
Q ss_pred HHHHHHHhhhC-CCCCeeee---ecCCCCceEEEEEeCCCCCCCCCcEEE--EEEEcCCCCCCCCCeeeEecc------c
Q 032063 6 ILKELRDLQRD-PPTSCSAG---PVAEDMFHWQATIIGPNDSPYAGGVFV--VTIHFPPDYPFKPPKVAFKTK------V 73 (148)
Q Consensus 6 L~~E~~~l~~~-~~~~~~~~---~~~~n~~~w~~~i~gp~~tpy~g~~f~--~~i~fp~~yP~~pP~v~f~~~------i 73 (148)
..+|..++.+. +....... -...++..|.++|. .+|+|+.|. +.|.||++||++||.| |.++ .
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~ 99 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIK 99 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEEC
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEEC
Confidence 45566666553 22111121 12368899999997 579999988 4999999999999999 6555 4
Q ss_pred ccccccCCCceecccccccCCC-ccCHHHHHHHHHHhhcC
Q 032063 74 FHPNINSNGNICLDILKEQWSP-ALTISKVLLSICSLLTD 112 (148)
Q Consensus 74 ~Hpnv~~~G~vcl~~l~~~W~p-~~~~~~il~~l~~ll~~ 112 (148)
.|||||.+|+||++.|.+ |++ ..+|.+++..|++.|.+
T Consensus 100 ~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 100 TGKHVDANGKIYLPYLHE-WKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CBTTBCTTCBBCCHHHHT-CCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCEecccccc-cCCCCCCHHHHHHHHHHHHhh
Confidence 899999999999999954 998 78999999999999875
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.27 E-value=0.0056 Score=41.06 Aligned_cols=66 Identities=15% Similarity=0.191 Sum_probs=42.8
Q ss_pred HHHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEec
Q 032063 4 KRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKT 71 (148)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~ 71 (148)
.+...|+..|+..-+..+.+ ..+....+.+.|....+..-+.-.+.+.+.||++||.+||.+.+.+
T Consensus 13 e~q~~EleaL~sIy~d~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 13 EEQRNELEALESIYPDSFTV--LSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHCSSSEEE--CCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHccCceEE--ccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 45677888888754444433 2333456666665222222234478999999999999999998644
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.41 E-value=0.027 Score=37.57 Aligned_cols=68 Identities=12% Similarity=0.161 Sum_probs=41.1
Q ss_pred HHHHHHHHhhhCCCCCeeeeecCC--CCceEEEEEeCCCCCCC--CCcEEEEEEEcCCCCCCCCCeeeEecc
Q 032063 5 RILKELRDLQRDPPTSCSAGPVAE--DMFHWQATIIGPNDSPY--AGGVFVVTIHFPPDYPFKPPKVAFKTK 72 (148)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~~--n~~~w~~~i~gp~~tpy--~g~~f~~~i~fp~~yP~~pP~v~f~~~ 72 (148)
+...|+..|+..-+..+.+..... +...+.+.+..+.+..- ..-.+.+.+.+|++||..+|.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 467788888875444444332111 23344445532211111 124788999999999999999987663
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.23 E-value=0.048 Score=36.90 Aligned_cols=66 Identities=15% Similarity=0.247 Sum_probs=40.7
Q ss_pred HHHHHHHHhhhCCCCCeeeeecC------CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEec
Q 032063 5 RILKELRDLQRDPPTSCSAGPVA------EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKT 71 (148)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~------~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~ 71 (148)
+-..|+..|+..-+..+.+.... .....+.+.|.. ..+.-..-.+.+.+.+|++||..||.|.+.+
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRS-VDKEPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEEC-SSCSSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEec-CCCCCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 35667777776533333321110 124567777763 2222123478899999999999999998754
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.21 E-value=0.056 Score=38.89 Aligned_cols=84 Identities=14% Similarity=0.282 Sum_probs=61.2
Q ss_pred HHHHHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCCCce
Q 032063 5 RILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNI 84 (148)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~v 84 (148)
+|.+|+.+|-=+. +.-.+.++....+++.. =.|..+.+++.++.+||.++|.+...-|. |
T Consensus 5 ~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D-----~~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~-------- 64 (186)
T 3zqs_A 5 SLIEEIGTLGWDK-----LVYADTCFSTIKLKAED-----ASGREHLITLKLKAKYPAESPDYFVDFPV--P-------- 64 (186)
T ss_dssp SHHHHHHHHCGGG-----EEEECTTSSEEEEEEEC-----TTSCEEEEEEECCTTTTTSCCEEECCCSS--C--------
T ss_pred HHHHHHHHhCCce-----eeeecCCccEEEEEEEe-----CCCCeEEEEEEECCCCCCCCCeeEEcCCC--C--------
Confidence 5777887763211 22335678888888884 24789999999999999999988765442 1
Q ss_pred ecccccccCCCccCHHHHHHHHHHhhcC
Q 032063 85 CLDILKEQWSPALTISKVLLSICSLLTD 112 (148)
Q Consensus 85 cl~~l~~~W~p~~~~~~il~~l~~ll~~ 112 (148)
+.-.|+|..++.+++.+.+..+.+
T Consensus 65 ----~~~~w~~~ssL~~v~~qF~~~Le~ 88 (186)
T 3zqs_A 65 ----FCASWTPQSSLISIYSQFLAAIES 88 (186)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred ----cccccCCCccHHHHHHHHHHHHHH
Confidence 124899999999998877777653
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.69 E-value=0.13 Score=34.25 Aligned_cols=65 Identities=15% Similarity=0.104 Sum_probs=39.3
Q ss_pred HHHHHHHHhhhCCCC--Ceeeee-cCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEe
Q 032063 5 RILKELRDLQRDPPT--SCSAGP-VAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFK 70 (148)
Q Consensus 5 RL~~E~~~l~~~~~~--~~~~~~-~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~ 70 (148)
+...|+..|+..-+. .+.+.- ...+...+.+.+.. .+..-..-.+.+.+.+|.+||..||.|.+.
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 356677777764221 232211 11234577777763 221111347899999999999999998754
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.69 E-value=0.19 Score=34.71 Aligned_cols=23 Identities=13% Similarity=0.378 Sum_probs=20.9
Q ss_pred EEEEEEEcCCCCCCCCCeeeEec
Q 032063 49 VFVVTIHFPPDYPFKPPKVAFKT 71 (148)
Q Consensus 49 ~f~~~i~fp~~yP~~pP~v~f~~ 71 (148)
.+.+++.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 89999999999999999998654
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.48 E-value=0.66 Score=30.97 Aligned_cols=67 Identities=16% Similarity=0.170 Sum_probs=40.1
Q ss_pred HHHHHHHHHhhhCCCCCeeeeecCC-----CCceEEEEEeCCCCC--CCCCcEEEEEEEcCCCCCCCCCeeeEec
Q 032063 4 KRILKELRDLQRDPPTSCSAGPVAE-----DMFHWQATIIGPNDS--PYAGGVFVVTIHFPPDYPFKPPKVAFKT 71 (148)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~t--py~g~~f~~~i~fp~~yP~~pP~v~f~~ 71 (148)
.+...|+..|+..-+..+....... ......+.+. +.+. .-..-.+.+.+.||++||..+|.|.+.+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 13 QRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 3456788888775444343321111 1345566664 3221 1112468999999999999999998743
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.05 E-value=0.19 Score=34.58 Aligned_cols=25 Identities=20% Similarity=0.503 Sum_probs=21.4
Q ss_pred cEEEEEEEcCCCCCCCCCeeeEecc
Q 032063 48 GVFVVTIHFPPDYPFKPPKVAFKTK 72 (148)
Q Consensus 48 ~~f~~~i~fp~~yP~~pP~v~f~~~ 72 (148)
-.+.+.+.+|.+||..||.|.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987654
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=85.45 E-value=0.16 Score=33.29 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=0.0
Q ss_pred CCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 114 NPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 114 ~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
....|.+.+.|++|.++++.|.+.|+.|+.-+|.
T Consensus 22 ~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 22 TTTEAVDAATAEKVFKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp ----------------------------------
T ss_pred ccCCchhHHHHHHHHhchhccccccccccccCcC
Confidence 3457888999999999999999999999965553
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=79.86 E-value=1.4 Score=20.50 Aligned_cols=19 Identities=37% Similarity=0.695 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhhhCCCCCe
Q 032063 3 SKRILKELRDLQRDPPTSC 21 (148)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~ 21 (148)
+.||.-|+..++.+|++|.
T Consensus 7 ldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 7 LDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHhhhccCCCCCC
Confidence 5789999999999998874
No 66
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=51.09 E-value=9.8 Score=20.62 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=31.5
Q ss_pred HHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 103 LLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 103 l~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|..|..-+.+|. ..-.+..+..+.+.|+..-...++.-+.+|++
T Consensus 3 LqqLl~tlksp~-sp~qqqqvl~ILksnPqLMAAfIkQR~~~y~~ 46 (47)
T 1zoq_C 3 LQDLLRTLKSPS-SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 46 (47)
T ss_dssp HHHHHHTCCSCC-CHHHHHHHHHHHHTCHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHhcCCC-CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence 455555566665 22256677788999999998888888888765
No 67
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=35.00 E-value=81 Score=23.55 Aligned_cols=44 Identities=23% Similarity=0.416 Sum_probs=29.6
Q ss_pred CCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCCCc--eec
Q 032063 40 PNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGN--ICL 86 (148)
Q Consensus 40 p~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~--vcl 86 (148)
|+-+.=|..+|--+++=... .||.+.|....-.+.+|+||. +|.
T Consensus 194 pDPskNENtRYFG~~tGG~~---TPPVl~ftNt~TTvLLDENGVGpLCk 239 (277)
T 3s7v_A 194 PDPSRNDNCRYFGRVVGGAA---TPPVVSYGNNSTIPLLDENGIGILCL 239 (277)
T ss_dssp ECTTSCCSEEEEEEEECCSS---CCCEEEEESSCCEECCCTTSCCEECT
T ss_pred CCCCcCcCceeeEEecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 33334445555555554443 699999998888889998865 776
No 68
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=34.53 E-value=35 Score=24.54 Aligned_cols=26 Identities=15% Similarity=0.378 Sum_probs=22.0
Q ss_pred CCCcEEEEEEEcCCCCCC-----CCCeeeEe
Q 032063 45 YAGGVFVVTIHFPPDYPF-----KPPKVAFK 70 (148)
Q Consensus 45 y~g~~f~~~i~fp~~yP~-----~pP~v~f~ 70 (148)
-+.|.|.|+-.+|--||. .||.|.|.
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 357899999999999998 78888774
No 69
>1kbh_B CREB-binding protein, nuclear receptor coactivator; nuclear hormone receptors, ACTR, CBP, transcription; NMR {Mus musculus} SCOP: a.153.1.1 PDB: 2c52_A 2kkj_A 2l14_A
Probab=34.28 E-value=65 Score=18.22 Aligned_cols=45 Identities=16% Similarity=0.250 Sum_probs=33.0
Q ss_pred HHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 102 VLLSICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 102 il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
.|..|..-|.+|. ..-.+..+..+.+.|+..-...+|.-+.+|.+
T Consensus 9 aLqqLl~tlksp~-speqqqqvl~ILksNPqLMAAfIKQR~~~~~~ 53 (59)
T 1kbh_B 9 ALQDLLRTLKSPS-SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 53 (59)
T ss_dssp HHHHHHHHHHSCT-TTTCSTHHHHHHTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCC-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence 3455555566665 33367788899999999988888888887765
No 70
>3nxg_A Major capsid protein VP1; beta-sandwich jelly roll, viral protein; 1.95A {Jc polyomavirus} PDB: 3nxd_C 3bwr_A* 3bwq_A*
Probab=30.43 E-value=91 Score=23.26 Aligned_cols=44 Identities=14% Similarity=0.255 Sum_probs=30.3
Q ss_pred CCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCCCc--eec
Q 032063 40 PNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGN--ICL 86 (148)
Q Consensus 40 p~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~--vcl 86 (148)
|+-+.=|..+|--+++=... .||.+.|....-.+.+|+||. +|.
T Consensus 185 pDPskNENtRYfG~~tGG~~---TPPVlqftNt~TTvLLDENGVGpLCk 230 (272)
T 3nxg_A 185 PDPTRNENTRYFGTLTGGEN---VPPVLHITNTATTVLLDEFGVGPLCK 230 (272)
T ss_dssp ECTTSCTTEEEEEEEECSTT---CCCEEEEESSCCEECCCTTSCCCBCG
T ss_pred CCCCcCcCceeEEEecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 44444455555555554443 699999998888889998865 776
No 71
>1sid_A Polyomavirus coat protein VP1; icosahedral virus; HET: SIA GAL BGC; 3.65A {Mouse polyomavirus} SCOP: b.121.6.1 PDB: 1sie_A*
Probab=29.96 E-value=96 Score=24.23 Aligned_cols=24 Identities=25% Similarity=0.598 Sum_probs=19.3
Q ss_pred CCCeeeEecccccccccCCCc--eec
Q 032063 63 KPPKVAFKTKVFHPNINSNGN--ICL 86 (148)
Q Consensus 63 ~pP~v~f~~~i~Hpnv~~~G~--vcl 86 (148)
.||.+.|....-.+.+|+||. +|.
T Consensus 249 TPPVlqftNt~TTvLLDENGVGpLCk 274 (383)
T 1sid_A 249 TPPVLQFTNTLTTVLLDENGVGPLCK 274 (383)
T ss_dssp CCCEEEEESSCEEECCCTTSCCCBCS
T ss_pred CCCeEEeccceeEEEEcCCCcccccc
Confidence 599999988888888898764 554
No 72
>1sva_1 Simian virus 40; virus coat protein, icosahedral virus; 3.10A {Simian virus 40} SCOP: b.121.6.1
Probab=28.71 E-value=89 Score=24.26 Aligned_cols=39 Identities=13% Similarity=0.207 Sum_probs=26.0
Q ss_pred CCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCCCc--eec
Q 032063 45 YAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGN--ICL 86 (148)
Q Consensus 45 y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~--vcl 86 (148)
=|..+|-.+++=... .||.+.|....-.+.+|+||. +|.
T Consensus 215 NENtRYFG~~tGG~~---TPPVlqftNt~TTvLLDENGVGpLCk 255 (361)
T 1sva_1 215 NENTRYFGTYTGGEN---VPPVLHITNTATTVLLDEQGVGPLCK 255 (361)
T ss_dssp CTTEEEEEEEECCSS---CCCEEEEETTCCEECCCTTSCCCBCS
T ss_pred CcCceeeEEecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 344444444443333 699999998888888998764 665
No 73
>1vps_A Polyomavirus VP1 pentamer; virus coat protein, oligosaccharide binding, virus assembly, acid, viral protein; HET: SIA GAL NAG; 1.90A {Murine polyomavirus} SCOP: b.121.6.1 PDB: 1vpn_A* 1cn3_A
Probab=28.48 E-value=1.3e+02 Score=22.62 Aligned_cols=43 Identities=14% Similarity=0.277 Sum_probs=28.4
Q ss_pred CCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCCCc--eec
Q 032063 41 NDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGN--ICL 86 (148)
Q Consensus 41 ~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~--vcl 86 (148)
+-+.=|..+|--+++=... .||.+.|....-.+.+|+||. +|.
T Consensus 199 DPskNENtRYFG~~tGG~~---TPpvl~ftNt~TtvLldEnGvGpLCk 243 (289)
T 1vps_A 199 DPAKNENTRYFGNYTGGTT---TPPVLQFTNTLTTVLLDENGVGPLCK 243 (289)
T ss_dssp CTTSCTTEEEEEEEECCSS---CCCEEEEESSCCEECCCTTSCCCEES
T ss_pred CCCcCcCceeeeeecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 3333444455555444433 699999998888888998764 776
No 74
>4fmh_A VP1; viral capsid protein, jelly roll, encapsidation, receptor BI sialylated oligosaccharides, viral protein; HET: SIA GAL; 1.85A {Merkel cell polyomavirus} PDB: 4fmg_A* 4fmi_A* 4fmj_A*
Probab=27.65 E-value=1.2e+02 Score=22.92 Aligned_cols=44 Identities=18% Similarity=0.369 Sum_probs=31.1
Q ss_pred CCCCCCCCcEEEEEEEcCCCCCCCCCeeeEecccccccccCCCc--eec
Q 032063 40 PNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGN--ICL 86 (148)
Q Consensus 40 p~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~--vcl 86 (148)
|+-+.=|..+|--+++=... .||.+.|....-.+..|+||. +|.
T Consensus 202 PDPsrNENtRYFG~~tGG~~---TPPVl~ftNt~TTvLLDENGVGpLCk 247 (289)
T 4fmh_A 202 PDPSKNENSRYYGSIQTGSQ---TPTVLQFSNTLTTVLLDENGVGPLCK 247 (289)
T ss_dssp ECTTSCTTEEEEEEEECSSS---CCCEEEEETTCCEECCCTTSCCCBCG
T ss_pred CCCCcCcCceeeeEecCCCC---CCCeEEecCceeEEEEcCCCccccee
Confidence 44444556666666665544 799999988887888998865 776
No 75
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=27.26 E-value=73 Score=19.09 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=30.2
Q ss_pred HHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhC
Q 032063 106 ICSLLTDPNPDDPLVPEIAHMCKTDKTKYESSARSWTQKYAM 147 (148)
Q Consensus 106 l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|+.|+..-++...+.+++..+..+=.+.|...+-..+.+.|+
T Consensus 11 L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAK 52 (76)
T 1h3o_B 11 LQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLAR 52 (76)
T ss_dssp HHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444436677788888888888888888888777776653
No 76
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=25.90 E-value=1.3e+02 Score=20.83 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=28.2
Q ss_pred CCceEEEEEeCCCC-------------CCCCCcEEEEEEEcCCCCCCCCCe
Q 032063 29 DMFHWQATIIGPND-------------SPYAGGVFVVTIHFPPDYPFKPPK 66 (148)
Q Consensus 29 n~~~w~~~i~gp~~-------------tpy~g~~f~~~i~fp~~yP~~pP~ 66 (148)
+-.+|.++..|..+ ||..-|.++|.+.-+.--|..-|.
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 44589998887544 578889999999986666666665
No 77
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=24.00 E-value=77 Score=18.13 Aligned_cols=20 Identities=5% Similarity=0.127 Sum_probs=17.1
Q ss_pred ccHHHHHHHHhCHHHHHHHH
Q 032063 119 LVPEIAHMCKTDKTKYESSA 138 (148)
Q Consensus 119 ~n~~a~~~~~~~~~~f~~~~ 138 (148)
.|++.+.+..+|+++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 57888899999999998865
No 78
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=23.40 E-value=53 Score=17.12 Aligned_cols=12 Identities=33% Similarity=0.589 Sum_probs=10.0
Q ss_pred HHHHHHHHHHhh
Q 032063 3 SKRILKELRDLQ 14 (148)
Q Consensus 3 ~~RL~~E~~~l~ 14 (148)
++|+..|++++.
T Consensus 30 ~~~~~~~~~~~~ 41 (42)
T 3g9r_A 30 IKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 589999998875
No 79
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=22.56 E-value=76 Score=18.83 Aligned_cols=21 Identities=5% Similarity=0.126 Sum_probs=18.4
Q ss_pred ccHHHHHHHHhCHHHHHHHHH
Q 032063 119 LVPEIAHMCKTDKTKYESSAR 139 (148)
Q Consensus 119 ~n~~a~~~~~~~~~~f~~~~~ 139 (148)
.|++.+.+..+|+++|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 688999999999999998764
No 80
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=21.57 E-value=54 Score=18.43 Aligned_cols=11 Identities=36% Similarity=0.857 Sum_probs=8.6
Q ss_pred EEEEcCCCCCC
Q 032063 52 VTIHFPPDYPF 62 (148)
Q Consensus 52 ~~i~fp~~yP~ 62 (148)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 45688999984
No 81
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=21.47 E-value=1.4e+02 Score=18.61 Aligned_cols=25 Identities=24% Similarity=0.348 Sum_probs=19.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCeeeEec
Q 032063 46 AGGVFVVTIHFPPDYPFKPPKVAFKT 71 (148)
Q Consensus 46 ~g~~f~~~i~fp~~yP~~pP~v~f~~ 71 (148)
.+..+...+.|+..|+. +|.|.+.-
T Consensus 27 g~R~~~~~V~F~~~F~~-~P~V~v~l 51 (101)
T 2ccv_A 27 NTRELAKNITFASPYCR-PPVVLLSI 51 (101)
T ss_dssp SCEEEEEEEECSSCCSS-CCEEEEEE
T ss_pred cceEEEEEeEeCcccCC-CCEEEEEe
Confidence 34468888999999996 89998743
No 82
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=21.16 E-value=41 Score=22.61 Aligned_cols=67 Identities=22% Similarity=0.324 Sum_probs=39.8
Q ss_pred HHHHHhhhCCCCCeeeeecCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeeeEe---cccccccccCCCce
Q 032063 8 KELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFK---TKVFHPNINSNGNI 84 (148)
Q Consensus 8 ~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~i~fp~~yP~~pP~v~f~---~~i~Hpnv~~~G~v 84 (148)
+++++....-+.++.+....++ -..++.... .| ..+. ..||.|.+. +.--|++|..+|.+
T Consensus 5 ~~fr~a~~~~p~~V~vVTt~~~-g~~~g~t~s---------~~-~svs------~~PP~v~v~i~~~~~t~~~i~~~~~F 67 (157)
T 3pft_A 5 TSLREAFGHFPSGVIAIAAEVD-GTRVGLAAS---------TF-VPVS------LEPPLVAFAVQNSSTTWPKLKDLPSL 67 (157)
T ss_dssp HHHHHHHHTSCBCCEEEEEEET-TEEEEEEES---------CC-EEEE------TTTTEEEEEEETTCSSHHHHTTSSCE
T ss_pred HHHHHHHHhCCCceEEEEEeeC-CEEEEEEee---------eE-eEEE------CCCcEEEEEECCCCchHHHHHhCCEE
Confidence 4677777777777765433222 112222110 01 1222 368998884 34568899999999
Q ss_pred ecccccc
Q 032063 85 CLDILKE 91 (148)
Q Consensus 85 cl~~l~~ 91 (148)
|+++|.+
T Consensus 68 ~Vnvl~~ 74 (157)
T 3pft_A 68 GISVLGE 74 (157)
T ss_dssp EEEECBT
T ss_pred EEEECCH
Confidence 9999954
No 83
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=20.78 E-value=1.8e+02 Score=19.91 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=24.7
Q ss_pred CCceEEEEEeCCCC-------------CCCCCcEEEEEEEcCCCCCCC
Q 032063 29 DMFHWQATIIGPND-------------SPYAGGVFVVTIHFPPDYPFK 63 (148)
Q Consensus 29 n~~~w~~~i~gp~~-------------tpy~g~~f~~~i~fp~~yP~~ 63 (148)
+-.+|.++-.|..+ ||..-|.++|.+.-+.-.|..
T Consensus 37 ~dlewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpPd~~~ 84 (155)
T 1roc_A 37 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAEL 84 (155)
T ss_dssp SCEEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECCCCGGG
T ss_pred CCcEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCCCCccc
Confidence 44789988887444 577789999988875444444
Done!